BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2563
Length=349
Score E
Sequences producing significant alignments: (Bits) Value
gi|167968827|ref|ZP_02551104.1| hypothetical glutamine-transport... 669 0.0
gi|15609700|ref|NP_217079.1| glutamine-transport transmembrane p... 668 0.0
gi|289746355|ref|ZP_06505733.1| glutamine-transport transmembran... 666 0.0
gi|289570732|ref|ZP_06450959.1| glutamine-transport transmembran... 639 0.0
gi|289751182|ref|ZP_06510560.1| LOW QUALITY PROTEIN: glutamine-t... 639 0.0
gi|240168823|ref|ZP_04747482.1| glutamine-transport transmembran... 542 3e-152
gi|15607214|ref|NP_214586.1| glutamine-transport transmembrane p... 534 7e-150
gi|183980248|ref|YP_001848539.1| glutamine-transport transmembra... 533 1e-149
gi|289748538|ref|ZP_06507916.1| glutamine-transport transmembran... 429 3e-118
gi|333989155|ref|YP_004521769.1| glutamine-transport transmembra... 337 2e-90
gi|289444099|ref|ZP_06433843.1| glutamine-transport transmembran... 275 8e-72
gi|152992988|ref|YP_001358709.1| ABC transporter permease [Sulfu... 99.0 1e-18
gi|257898554|ref|ZP_05678207.1| ABC transporter permease [Entero... 97.4 3e-18
gi|307721246|ref|YP_003892386.1| hypothetical protein Saut_1326 ... 97.4 3e-18
gi|293553529|ref|ZP_06674157.1| permease domain protein [Enteroc... 97.1 4e-18
gi|257889530|ref|ZP_05669183.1| permease [Enterococcus faecium 1... 96.7 6e-18
gi|294617773|ref|ZP_06697387.1| ABC transporter, permease protei... 96.3 6e-18
gi|152989865|ref|YP_001355587.1| ABC transporter permease [Nitra... 96.3 6e-18
gi|257887435|ref|ZP_05667088.1| permease [Enterococcus faecium 1... 95.9 9e-18
gi|260577330|ref|ZP_05845302.1| protein of unknown function DUF2... 95.5 1e-17
gi|314994827|ref|ZP_07859958.1| efflux ABC transporter, permease... 95.5 1e-17
gi|69244157|ref|ZP_00602693.1| Protein of unknown function DUF21... 95.1 2e-17
gi|70725699|ref|YP_252613.1| hypothetical protein SH0698 [Staphy... 94.7 2e-17
gi|257871435|ref|ZP_05651088.1| ABC transporter permease [Entero... 94.4 2e-17
gi|227551462|ref|ZP_03981511.1| ABC superfamily ATP binding cass... 90.9 3e-16
gi|242243835|ref|ZP_04798279.1| hemin ABC superfamily ATP bindin... 89.7 6e-16
gi|325571492|ref|ZP_08146992.1| ABC superfamily ATP binding cass... 88.2 2e-15
gi|257865276|ref|ZP_05644929.1| ABC transporter permease [Entero... 88.2 2e-15
gi|126666275|ref|ZP_01737254.1| ABC transporter, permease protei... 87.4 3e-15
gi|229173895|ref|ZP_04301433.1| ABC transporter, permease [Bacil... 87.0 4e-15
gi|327438346|dbj|BAK14711.1| ABC-type antimicrobial peptide tran... 87.0 5e-15
gi|163789585|ref|ZP_02184023.1| antimicrobial peptide ABC transp... 86.7 5e-15
gi|229191302|ref|ZP_04318288.1| ABC transporter, permease [Bacil... 86.3 8e-15
gi|319893321|ref|YP_004150196.1| Heme efflux system permease Hrt... 85.9 8e-15
gi|229060821|ref|ZP_04198176.1| ABC transporter, permease [Bacil... 85.1 1e-14
gi|257874876|ref|ZP_05654529.1| ABC transporter permease [Entero... 84.7 2e-14
gi|229030921|ref|ZP_04186940.1| ABC transporter, permease [Bacil... 84.7 2e-14
gi|229167893|ref|ZP_04295624.1| ABC transporter, permease [Bacil... 84.3 2e-14
gi|228986317|ref|ZP_04146454.1| ABC transporter, permease [Bacil... 84.3 2e-14
gi|229012453|ref|ZP_04169628.1| ABC transporter, permease [Bacil... 84.3 3e-14
gi|229134073|ref|ZP_04262893.1| ABC transporter, permease [Bacil... 84.0 4e-14
gi|326940956|gb|AEA16852.1| ABC transporter permease protein [Ba... 83.6 5e-14
gi|228940318|ref|ZP_04102889.1| ABC transporter, permease [Bacil... 83.2 5e-14
gi|229162126|ref|ZP_04290097.1| ABC transporter, permease [Bacil... 82.8 7e-14
gi|229080446|ref|ZP_04212967.1| ABC transporter, permease [Bacil... 82.8 8e-14
gi|229156829|ref|ZP_04284916.1| ABC transporter, permease [Bacil... 82.8 9e-14
gi|228953538|ref|ZP_04115581.1| ABC transporter, permease [Bacil... 82.4 9e-14
gi|217960658|ref|YP_002339222.1| putative ABC transporter, perme... 82.4 1e-13
gi|222096713|ref|YP_002530770.1| ABC transporter permease [Bacil... 82.4 1e-13
gi|229018478|ref|ZP_04175340.1| ABC transporter, permease [Bacil... 82.4 1e-13
>gi|167968827|ref|ZP_02551104.1| hypothetical glutamine-transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis H37Ra]
Length=388
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/349 (100%), Positives = 349/349 (100%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA
Sbjct 40 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 99
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM
Sbjct 100 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 159
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG
Sbjct 160 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 219
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI
Sbjct 220 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 279
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL
Sbjct 280 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 339
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 340 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 388
>gi|15609700|ref|NP_217079.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis H37Rv]
gi|15842101|ref|NP_337138.1| hypothetical protein MT2639 [Mycobacterium tuberculosis CDC1551]
gi|31793745|ref|NP_856238.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
bovis AF2122/97]
71 more sequence titles
Length=349
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/349 (100%), Positives = 349/349 (100%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA
Sbjct 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM
Sbjct 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG
Sbjct 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI
Sbjct 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL
Sbjct 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
>gi|289746355|ref|ZP_06505733.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis 02_1987]
gi|289686883|gb|EFD54371.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis 02_1987]
Length=349
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/349 (99%), Positives = 349/349 (100%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA
Sbjct 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM
Sbjct 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG
Sbjct 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI
Sbjct 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL
Sbjct 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPMTVV+PLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 301 APLFPMTVVLPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
>gi|289570732|ref|ZP_06450959.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T17]
gi|289544486|gb|EFD48134.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T17]
Length=340
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/338 (99%), Positives = 336/338 (99%), Gaps = 0/338 (0%)
Query 12 RKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP 71
+ RLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP
Sbjct 3 KTTRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP 62
Query 72 FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST 131
FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST
Sbjct 63 FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST 122
Query 132 PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT 191
PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT
Sbjct 123 PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT 182
Query 192 ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY 251
ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY
Sbjct 183 ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY 242
Query 252 LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP 311
LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP
Sbjct 243 LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP 302
Query 312 LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 303 LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 340
>gi|289751182|ref|ZP_06510560.1| LOW QUALITY PROTEIN: glutamine-transport transmembrane protein
ABC transporter [Mycobacterium tuberculosis T92]
gi|289691769|gb|EFD59198.1| LOW QUALITY PROTEIN: glutamine-transport transmembrane protein
ABC transporter [Mycobacterium tuberculosis T92]
Length=342
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/338 (99%), Positives = 336/338 (99%), Gaps = 0/338 (0%)
Query 12 RKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP 71
+ RLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP
Sbjct 5 KTTRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAGPFLGSTP 64
Query 72 FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST 131
FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST
Sbjct 65 FAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVSDGRAPST 124
Query 132 PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT 191
PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT
Sbjct 125 PDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEGLQQLAYNGQPT 184
Query 192 ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY 251
ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY
Sbjct 185 ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVY 244
Query 252 LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP 311
LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP
Sbjct 245 LSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVP 304
Query 312 LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 305 LSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 342
>gi|240168823|ref|ZP_04747482.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
kansasii ATCC 12478]
Length=349
Score = 542 bits (1397), Expect = 3e-152, Method: Compositional matrix adjust.
Identities = 275/349 (79%), Positives = 309/349 (89%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRD+QWRKRRL IA++STGL+F MTLVLTGL NGFRVEA+ TVDSMGVD FVVK
Sbjct 1 MLFAALRDMQWRKRRLFIAVLSTGLIFGMTLVLTGLANGFRVEAQHTVDSMGVDQFVVKT 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGSTPF DL +VA PGV AAAPL + +++GTS RNVTAFGAPE GPGM
Sbjct 61 GAAGPFLGSTPFPDTDLARVAAEPGVTAAAPLGCVGTIMKEGTSTRNVTAFGAPERGPGM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
P++S+GRAP+ PDEVAVSSTLGR LGD LQVGA TLRIVGIVP STALAKIPNIFLTTEG
Sbjct 121 PQISEGRAPAKPDEVAVSSTLGRRLGDTLQVGAHTLRIVGIVPNSTALAKIPNIFLTTEG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQQLAYNGQP ++SIG+DG PR LPDGYQT +RA AV DL+RPL+VAV++I++VAVLLWI
Sbjct 181 LQQLAYNGQPMVTSIGVDGAPRHLPDGYQTYDRAGAVHDLVRPLRVAVNSISIVAVLLWI 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VAALIVGSVVYLSALERLRDFAVFKAIG PTRSI+AGLALQA+VV+LLAAVVG ILS LL
Sbjct 241 VAALIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALVVSLLAAVVGVILSKLL 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPM V VP A++ALP +AT+IGLLAS+AGL+RVV +DPALAFGGP
Sbjct 301 APLFPMIVAVPGWAYLALPVVATLIGLLASLAGLKRVVTVDPALAFGGP 349
>gi|15607214|ref|NP_214586.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis H37Rv]
gi|15839451|ref|NP_334488.1| hypothetical protein MT0078 [Mycobacterium tuberculosis CDC1551]
gi|31791249|ref|NP_853742.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
bovis AF2122/97]
69 more sequence titles
Length=349
Score = 534 bits (1376), Expect = 7e-150, Method: Compositional matrix adjust.
Identities = 266/349 (77%), Positives = 308/349 (89%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRD+QWRKRRLVI I+STGL+F MTLVLTGL NGFRVEA TVDSMGVD FVV++
Sbjct 1 MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRS 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGS PF +DL +VA PGV+AAAPL + + +++GTS RNVT FGAPEHGPGM
Sbjct 61 GAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
PRVS+GR+PS PDEVA SST+GR+LGD ++VGAR LR+VGIVP STALAKIPN+FLTTEG
Sbjct 121 PRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQ+LAYNGQP I+SIGI GMPRQLP+GYQT +R AV+DL+RPLKVAV++I++VAVLLWI
Sbjct 181 LQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWI 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VA LIVGSVVYLSALERLRDFAVFKAIG PTRSI+AGLALQA+V+ALLAAVVG +L+ +L
Sbjct 241 VAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALVIALLAAVVGVVLAQVL 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPM V VP+ A++ALP A VIGL ASVAGL+RVV +DPA AFGGP
Sbjct 301 APLFPMIVAVPVGAYLALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP 349
>gi|183980248|ref|YP_001848539.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
marinum M]
gi|183173574|gb|ACC38684.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
marinum M]
Length=349
Score = 533 bits (1374), Expect = 1e-149, Method: Compositional matrix adjust.
Identities = 266/349 (77%), Positives = 309/349 (89%), Gaps = 0/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRD+QWRKRRLVIAI+STG++F MTLV+TGL NGFRVEA+ TVDS+GVD FVVKA
Sbjct 1 MLFAALRDMQWRKRRLVIAIISTGIIFGMTLVMTGLANGFRVEAQHTVDSLGVDVFVVKA 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGS PF +D+ +VA PGV+AAAPLA+ + +++G S RNVTAFGAPEHGPGM
Sbjct 61 GAAGPFLGSIPFPDVDVARVAAEPGVVAAAPLASMGTIMKEGKSTRNVTAFGAPEHGPGM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
P VSDGRAPS PDEVAVSSTL R++ D LQ+GA LRIVGIVP STALAKIPNIFLTTEG
Sbjct 121 PEVSDGRAPSKPDEVAVSSTLNRHIDDTLQLGAHKLRIVGIVPNSTALAKIPNIFLTTEG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQ++AYNGQP I+SIGIDG PR+LP+GYQT +R AV+DL+RPLKVAV++I++VAVLLWI
Sbjct 181 LQRVAYNGQPMITSIGIDGSPRELPEGYQTYDREGAVNDLIRPLKVAVNSISIVAVLLWI 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VA LIVGSVVYLSALER+RDFAVFKAIG PT SI+AGLALQA+VV+LLAAVVG +LS LL
Sbjct 241 VAVLIVGSVVYLSALERMRDFAVFKAIGTPTHSIMAGLALQALVVSLLAAVVGVVLSKLL 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
APLFPM V VP A++ALP +A +IGLLASVAGL+RV+ +DPALAFGGP
Sbjct 301 APLFPMIVAVPGGAYLALPVVAILIGLLASVAGLKRVMTVDPALAFGGP 349
>gi|289748538|ref|ZP_06507916.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T92]
gi|289689125|gb|EFD56554.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T92]
Length=306
Score = 429 bits (1104), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 208/268 (78%), Positives = 239/268 (90%), Gaps = 0/268 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
MLFAALRD+QWRKRRLVI I+STGL+F MTLVLTGL NGFRVEA TVDSMGVD FVV++
Sbjct 3 MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRS 62
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
GAAGPFLGS PF +DL +VA PGV+AAAPL + + +++GTS RNVT FGAPEHGPGM
Sbjct 63 GAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGM 122
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
PRVS+GR+PS PDEVA SST+GR+LGD ++VGAR LR+VGIVP STALAKIPN+FLTTEG
Sbjct 123 PRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEG 182
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
LQ+LAYNGQP I+SIGI GMPRQLP+GYQT +R AV+DL+RPLKVAV++I++VAVLLWI
Sbjct 183 LQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWI 242
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIG 268
VA LIVGSVVYLSALERLRDFAVFKAIG
Sbjct 243 VAVLIVGSVVYLSALERLRDFAVFKAIG 270
>gi|333989155|ref|YP_004521769.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
sp. JDM601]
gi|333485123|gb|AEF34515.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
sp. JDM601]
Length=349
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/349 (56%), Positives = 255/349 (74%), Gaps = 2/349 (0%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
ML ALRD+QWR RR ++A V T +VFA+TLVL GL +GFRVEAE VDS+G+D+++++
Sbjct 3 MLITALRDLQWRLRRFIVAAVGTAMVFALTLVLAGLTHGFRVEAEHVVDSLGIDSYLIQT 62
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGM 120
A GPF+GS+ F Q + VA GV AA P+ + ++ G + NV +G P+ M
Sbjct 63 AAVGPFMGSSRFPQKEAGDVAAISGVEAALPVVYGNTILQDGEAPLNVNVYGVPK--AAM 120
Query 121 PRVSDGRAPSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
P ++ GRAP+ P+E+A+S+TL R +GDD+++GA LRIVG+V +ST LA PN FLT G
Sbjct 121 PPITAGRAPTEPNEIAMSATLKRAVGDDVELGAGKLRIVGLVGKSTTLAGQPNAFLTVAG 180
Query 181 LQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWI 240
Q+L Y+GQP S+IG+ G P ++P+GY+ V+RA AV D++RPL A A++ ++VLLW
Sbjct 181 AQRLMYSGQPVASAIGLRGTPAEVPEGYRVVDRAAAVDDMVRPLAGAQMALSYMSVLLWG 240
Query 241 VAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLL 300
VAALIVGS++YLSALER RDFAVFKA+GV T +LAGLALQAV VA+ AAV+GG L++ +
Sbjct 241 VAALIVGSLIYLSALERTRDFAVFKALGVTTGMVLAGLALQAVTVAVAAAVLGGALAVAI 300
Query 301 APLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGGP 349
PLFPM V V S+F L A IGLLAS+AGLR VA+DP LAFGGP
Sbjct 301 GPLFPMLVAVTTSSFALLVLTAVGIGLLASLAGLRHAVAVDPVLAFGGP 349
>gi|289444099|ref|ZP_06433843.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T46]
gi|289417018|gb|EFD14258.1| glutamine-transport transmembrane protein ABC transporter [Mycobacterium
tuberculosis T46]
Length=150
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/150 (100%), Positives = 150/150 (100%), Gaps = 0/150 (0%)
Query 200 MPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLR 259
MPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLR
Sbjct 1 MPRQLPDGYQTVNRADAVSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLR 60
Query 260 DFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALP 319
DFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALP
Sbjct 61 DFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALP 120
Query 320 AIATVIGLLASVAGLRRVVAIDPALAFGGP 349
AIATVIGLLASVAGLRRVVAIDPALAFGGP
Sbjct 121 AIATVIGLLASVAGLRRVVAIDPALAFGGP 150
>gi|152992988|ref|YP_001358709.1| ABC transporter permease [Sulfurovum sp. NBC37-1]
gi|151424849|dbj|BAF72352.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
Length=381
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/387 (23%), Positives = 168/387 (44%), Gaps = 45/387 (11%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
M+ A +DVQ + ++ + G++ + L++ G+ G ++AE + + D +VV+
Sbjct 1 MINLAQKDVQHTLGKFLVTAMGVGMLLGIVLIMIGVYRGMMIDAEVLLGDIKADLWVVQE 60
Query 61 GAAGPFLGSTPFAQIDLPQVARA-PGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPG 119
G GPF ++ + DL R G+ A L + + A G G
Sbjct 61 GTLGPFAEASRIHE-DLRDTLRVIDGMETAEALTFQNLQLPKKPKPVRAVAVGYDPFGTI 119
Query 120 MP----RVSDGRAPSTPD--EVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPN 173
P R+ +G P D E+ VS G LGD + + +VG+ + + P
Sbjct 120 NPINPERIIEGH-PLEKDHYEIVVSDKTGFKLGDRIHLVRNDYTVVGVTHGTVSSGGDPL 178
Query 174 IFLTTEGLQQLAYN------------GQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLM 221
++++ + Q L ++ G + ++ + ++ GY DAV+ +
Sbjct 179 VYVSLKDAQDLQFSYTNNRIRSDRARGYRNKDAFMVNTIVGRVKSGYD----VDAVAGEI 234
Query 222 RPLK--------------------VAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDF 261
R K A I + +L IV+ +I+ ++Y LE++++
Sbjct 235 RRFKHNSVYTAAQQKTILTKNLIEKASKQIGMFTAILVIVSTIIIALIIYTMTLEKMKEI 294
Query 262 AVFKAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALPAI 321
++ K IG+P ++ + + +++ LA + G I S L+ FP VV+ + L I
Sbjct 295 SIMKLIGIPNSMVIKMIVQETLLLGFLAFIFGNIFSHLIYSKFPKRVVLEIPDAWTLFII 354
Query 322 ATVIGLLASVAGLRRVVAIDPALAFGG 348
+ +LAS+ G+R+V+ DPA A GG
Sbjct 355 VIIASILASLVGIRKVIKADPAAAIGG 381
>gi|257898554|ref|ZP_05678207.1| ABC transporter permease [Enterococcus faecium Com15]
gi|257836466|gb|EEV61540.1| ABC transporter permease [Enterococcus faecium Com15]
Length=357
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/370 (24%), Positives = 163/370 (45%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + I L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIIGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ ++ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTREDLTYIEGGE----KAPIGLYSGAVK-GKNKENVTVFGTSKKAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G +E+ +S L G +GD +++G+ L IVGI P +T P I+
Sbjct 115 KLTKGHEFKIKNEIIISQNLADSGYKIGDTIKIGSYNDPLTIVGIFP-ATYYTVSPVIYT 173
Query 177 TTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRA----DAVSDLMRPLKVA--VDA 230
+ + L Y QP S Q +G T N A + S ++ L + +++
Sbjct 174 SLDTWTALKYGKQPFASE------EEQPINGIVTKNSAKISKEKASKKLQLLTIETFIES 227
Query 231 I----------TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLAL 280
I + L++V A +VG +Y+ L++ F V KA G+ I L
Sbjct 228 IPGYSAQNMTLNAMIYFLFLVVAAVVGIFMYVITLQKTAIFGVMKAQGIKNSFIAKSLVA 287
Query 281 QAVVVALLAAVVGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
Q+ +V L+ +V + + L + + P M V S ++ I ++ +L + +R +
Sbjct 288 QSFIVGLVGVLVALVFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|307721246|ref|YP_003892386.1| hypothetical protein Saut_1326 [Sulfurimonas autotrophica DSM
16294]
gi|306979339|gb|ADN09374.1| protein of unknown function DUF214 [Sulfurimonas autotrophica
DSM 16294]
Length=381
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/382 (22%), Positives = 168/382 (44%), Gaps = 35/382 (9%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
M+ A +++ + ++ + G++ + L++ G+ G ++A+ ++ + VD ++V+
Sbjct 1 MINLAQKEIVHTFGKFIVTAMGVGMLLGIVLIMMGVYRGMMIDAQVLLNDLDVDFWIVQE 60
Query 61 GAAGPFLGSTPFAQIDLPQVARA-PGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPG 119
GPF S+ + DL R G+ + + + A V A G G
Sbjct 61 NTLGPFAESSRVHE-DLKDTIRIIEGIDKSEGITFQNLQLPSKEGAIRVFAVGFDPFGDI 119
Query 120 MP----RVSDGRAPSTPD-EVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNI 174
P R+ GR + E+ V G L D + +G +VGI + + P +
Sbjct 120 NPINPERIIQGRGINKSHYEMVVGDKTGFKLHDIIHLGRDDYTVVGITHGTVSSGGDPLV 179
Query 175 FLTTEGLQQLAY------------NGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMR 222
+++ + Q+L + G ++S ++ + GY T A +
Sbjct 180 YISLKDAQELQFLYSNERIRNDRARGINILNSHIVNAVIATKKSGYNTDKIAQNIRKFKH 239
Query 223 P----------------LKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKA 266
+K+A I + V+L IV+ +I+ ++Y LE++++ A+ K
Sbjct 240 NSVYTKDEEKTILTQNLIKMASKQIGMFTVILVIVSTIIIALIIYTMTLEKMKEIAIMKL 299
Query 267 IGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATVIG 326
IG+P I+ + + +++ +LA + G I + L+ FP VV+ + L +
Sbjct 300 IGIPNSMIIKMIVQETIIMGVLAFISGNIFAHLIYAKFPKRVVLEIPDAGLLFIVVIFAS 359
Query 327 LLASVAGLRRVVAIDPALAFGG 348
+LAS+ G+++V+A DP+ A GG
Sbjct 360 ILASLVGVKKVIAADPSEAIGG 381
>gi|293553529|ref|ZP_06674157.1| permease domain protein [Enterococcus faecium E1039]
gi|291602406|gb|EFF32630.1| permease domain protein [Enterococcus faecium E1039]
Length=357
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/370 (25%), Positives = 162/370 (44%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEEGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGM---------PRQLPDGYQTVNRADAVSDLMRPLK 225
+ + L Y QP S I+G+ + G Q + + + P
Sbjct 174 SLDTWTSLKYGQQPFASEEEQPINGIVIKDSAKISKEKASKGLQLLTIGTFIESI--PGY 231
Query 226 VAVD-AITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
A + + + L++V A +VG +Y+ L++ F V KA G+ I L Q+ +
Sbjct 232 SAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSFI 291
Query 285 VALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 292 V----GVVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|257889530|ref|ZP_05669183.1| permease [Enterococcus faecium 1,231,410]
gi|260559820|ref|ZP_05831999.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|257825890|gb|EEV52516.1| permease [Enterococcus faecium 1,231,410]
gi|260074044|gb|EEW62367.1| conserved hypothetical protein [Enterococcus faecium C68]
Length=357
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/370 (26%), Positives = 163/370 (45%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEGGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T A P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYAVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGM---------PRQLPDGYQTVNRADAVSDLMRPLK 225
+ + L Y QP S I+G+ + G Q + + + P
Sbjct 174 SLDTWTALKYGQQPFASEEEQPINGIVIKDSAKISKEKASKGLQLLTIGTFIESI--PGY 231
Query 226 VAVD-AITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
A + + + L++V A +VG +Y+ L++ F V KA G+ I L Q+ +
Sbjct 232 SAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSFI 291
Query 285 VALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 292 V----GVVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|294617773|ref|ZP_06697387.1| ABC transporter, permease protein [Enterococcus faecium E1679]
gi|291595947|gb|EFF27226.1| ABC transporter, permease protein [Enterococcus faecium E1679]
Length=357
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/370 (25%), Positives = 162/370 (44%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEEGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHELKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGM---------PRQLPDGYQTVNRADAVSDLMRPLK 225
+ + L Y QP S I+G+ + G Q + + + P
Sbjct 174 SLDTWTALKYGQQPFASEEEQPINGIVIKDSAKISKEKASKGLQLLTIGTFIESI--PGY 231
Query 226 VAVD-AITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
A + + + L++V A +VG +Y+ L++ F V KA G+ I L Q+ +
Sbjct 232 SAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSFI 291
Query 285 VALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 292 V----GVVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|152989865|ref|YP_001355587.1| ABC transporter permease [Nitratiruptor sp. SB155-2]
gi|151421726|dbj|BAF69230.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
Length=383
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/384 (24%), Positives = 169/384 (45%), Gaps = 37/384 (9%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
M+ AL+D+ K + ++ + G++ + L++ G+ G ++A+ +D +G D ++V+
Sbjct 1 MINLALKDIAHAKLKFIVTAMGLGMLLGIVLIMIGVYRGLIIDAQVLLDDIGADLWIVQE 60
Query 61 GAAGPFLGSTPFAQIDLPQVAR-APGVLAAAPLATAPSTIRQ-GTSARNVTAFGAPEHGP 118
+ GPF S+ + DL + G+ A LA IR + + + G G
Sbjct 61 NSLGPFAQSSRIHE-DLKNTLKVQEGIQKTAALAFMGFQIRTPNGQMKRIYSVGYDPFGE 119
Query 119 GMP----RVSDGRAPSTPD-EVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPN 173
P R+ GRA EV V+ LG LGD + +G +VGI + + P
Sbjct 120 ISPINPKRIIAGRAIQKKHYEVVVTDKLGFQLGDKIPMGRDIYTVVGITKGTVSSGGEPL 179
Query 174 IFLTTEGLQQLAY-NGQPTISSIGIDGMPRQ------------LPDGY------QTVNRA 214
I+L+ Q+L + P I + G+ + L G+ Q + R
Sbjct 180 IYLSLADAQKLQFLYSNPRIRNDRARGLNVKSDSHLVNAVVATLKPGFDPKSVAQKIERW 239
Query 215 DAVSDL----------MRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVF 264
VS + +++A I + V+L V+ +I+ ++Y LE++++ ++
Sbjct 240 KHVSVYTDKQQRWILTVNVIEMARKQIGMFTVILIAVSTIIIALIIYTMTLEKIKEISIM 299
Query 265 KAIGVPTRSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATV 324
K IG+P I+ + + +++ +LA + I + + FP VV+ L + +
Sbjct 300 KLIGIPNSMIVKMIMQETLILGILAFIFANIFAHTIYDKFPKRVVLQTPDAWGLFGVVLL 359
Query 325 IGLLASVAGLRRVVAIDPALAFGG 348
LAS+ G+ + + D A GG
Sbjct 360 ASFLASLFGVYKALKADERQAIGG 383
>gi|257887435|ref|ZP_05667088.1| permease [Enterococcus faecium 1,141,733]
gi|257823489|gb|EEV50421.1| permease [Enterococcus faecium 1,141,733]
Length=357
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/371 (25%), Positives = 166/371 (45%), Gaps = 38/371 (10%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSKEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEGGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGMPRQLPDGYQTVNRADAVSDL-MRPLKVAVDAI-- 231
+ + L Y QP S I+G+ + D + +++ DL + + +++I
Sbjct 174 SLDTWTALKYGKQPFASEEEQPINGIV--IKDSAK-ISKEKTSKDLQLLTIGTFIESIPG 230
Query 232 --------TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAV 283
+ L++V A +VG +Y+ L++ F V KA G+ I L Q+
Sbjct 231 YSAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSF 290
Query 284 VVALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRV 337
+V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 291 IVG----VVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTI 346
Query 338 VAIDPALAFGG 348
+DP A GG
Sbjct 347 TKVDPITAIGG 357
>gi|260577330|ref|ZP_05845302.1| protein of unknown function DUF214 [Rhodobacter sp. SW2]
gi|259020450|gb|EEW23774.1| protein of unknown function DUF214 [Rhodobacter sp. SW2]
Length=377
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/376 (27%), Positives = 161/376 (43%), Gaps = 36/376 (9%)
Query 5 ALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAG 64
AL+DVQ R V+ GL+ + L + G+ NG +A V + D +VV+AG G
Sbjct 4 ALKDVQHNLFRFVLTCAGLGLLMTVVLAMIGIYNGLVADALNIVKAPQADLWVVEAGTQG 63
Query 65 PFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAF---GAPEHGPGMP 121
PF S+ VAR GV AA A TI + R + + P H G
Sbjct 64 PFAESSSIPADTSDAVARMAGVAAAG--AITYQTIEADHAGRTMRLYLIGYQPGHIGGPI 121
Query 122 RVSDGRA-PSTPDEVAVSSTLGRNLGDDLQVGARTLRIVGIVPESTALAKIPNIFLTTEG 180
+++GR + E+ G GD L++G +VG+V ++ P +FLT
Sbjct 122 HIAEGRGIQQSHFEIVADRKSGLVPGDVLRLGRDRYSVVGLVEDTMNSGGDPAVFLTLAD 181
Query 181 LQQLAY----------------------------NGQPTISSIGIDGMPRQLPDGYQTVN 212
L +P + + RQ Q +
Sbjct 182 AMDLQTRLAPAAARVQAARGGVAGAGANVAAVIARLEPGADVVALAATVRQWKH-LQALT 240
Query 213 RADAVSDLM-RPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPT 271
+A+ + L+ + A I + +L V+A+++ ++Y +E+L+ A K IG P
Sbjct 241 QAEQENLLLVSVVDRARRQIGLFLGILLTVSAVVIALIIYTMTMEKLKQIATLKLIGAPD 300
Query 272 RSILAGLALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATVIGLLASV 331
R+I+A + QA+V+ + +G L LL+ +FP V++ L AI V+ L AS
Sbjct 301 RTIIALIVQQALVLGMTGWAIGLTLILLVKDVFPRRVLLEPFNVAMLGAIIFVVCLAASG 360
Query 332 AGLRRVVAIDPALAFG 347
G+R + +DPA A G
Sbjct 361 LGVRAALKVDPATALG 376
>gi|314994827|ref|ZP_07859958.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133a01]
gi|313590938|gb|EFR69783.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133a01]
Length=357
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/370 (25%), Positives = 162/370 (44%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEGGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGM---------PRQLPDGYQTVNRADAVSDLMRPLK 225
+ + L Y QP S I+G+ + G Q + + + P
Sbjct 174 SLDKWTALKYGQQPFASEEEQPINGIVIKDSAKISKEKASKGLQLLTIGTFIESI--PGY 231
Query 226 VAVD-AITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
A + + + L++V A +VG +Y+ L++ F V KA G+ I L Q+ +
Sbjct 232 SAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSFI 291
Query 285 VALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 292 V----GVVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|69244157|ref|ZP_00602693.1| Protein of unknown function DUF214 [Enterococcus faecium DO]
gi|257878269|ref|ZP_05657922.1| permease [Enterococcus faecium 1,230,933]
gi|257880949|ref|ZP_05660602.1| permease [Enterococcus faecium 1,231,502]
26 more sequence titles
gi|257884606|ref|ZP_05664259.1| permease [Enterococcus faecium 1,231,501]
gi|257892529|ref|ZP_05672182.1| permease [Enterococcus faecium 1,231,408]
gi|258616214|ref|ZP_05713984.1| ABC transporter, permease protein (putative) [Enterococcus faecium
DO]
gi|293560617|ref|ZP_06677105.1| permease domain protein [Enterococcus faecium E1162]
gi|293569892|ref|ZP_06680979.1| permease domain protein [Enterococcus faecium E1071]
gi|294614505|ref|ZP_06694418.1| permease domain protein [Enterococcus faecium E1636]
gi|294621683|ref|ZP_06700847.1| permease domain protein [Enterococcus faecium U0317]
gi|314939068|ref|ZP_07846331.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133a04]
gi|314943556|ref|ZP_07850319.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133C]
gi|314948813|ref|ZP_07852184.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0082]
gi|314952198|ref|ZP_07855215.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133A]
gi|314993265|ref|ZP_07858640.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133B]
gi|68196614|gb|EAN11040.1| Protein of unknown function DUF214 [Enterococcus faecium DO]
gi|257812497|gb|EEV41255.1| permease [Enterococcus faecium 1,230,933]
gi|257816607|gb|EEV43935.1| permease [Enterococcus faecium 1,231,502]
gi|257820444|gb|EEV47592.1| permease [Enterococcus faecium 1,231,501]
gi|257828908|gb|EEV55515.1| permease [Enterococcus faecium 1,231,408]
gi|291587640|gb|EFF19517.1| permease domain protein [Enterococcus faecium E1071]
gi|291592623|gb|EFF24219.1| permease domain protein [Enterococcus faecium E1636]
gi|291598692|gb|EFF29745.1| permease domain protein [Enterococcus faecium U0317]
gi|291605440|gb|EFF34886.1| permease domain protein [Enterococcus faecium E1162]
gi|313592246|gb|EFR71091.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133B]
gi|313595663|gb|EFR74508.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133A]
gi|313597754|gb|EFR76599.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133C]
gi|313641620|gb|EFS06200.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0133a04]
gi|313644756|gb|EFS09336.1| efflux ABC transporter, permease protein [Enterococcus faecium
TX0082]
Length=357
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/370 (25%), Positives = 162/370 (44%), Gaps = 36/370 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEGGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGM---------PRQLPDGYQTVNRADAVSDLMRPLK 225
+ + L Y QP S I+G+ + G Q + + + P
Sbjct 174 SLDTWTALKYGQQPFASEEEQPINGIVIKDSAKISKEKASKGLQLLTIGTFIESI--PGY 231
Query 226 VAVD-AITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
A + + + L++V A +VG +Y+ L++ F V KA G+ I L Q+ +
Sbjct 232 SAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSFI 291
Query 285 VALLAAVVGGILSLLLAPLFP------MTVVVPLSAFVALPAIATVIGLLASVAGLRRVV 338
V VVG +L+LL A L M V S ++ I ++ +L + +R +
Sbjct 292 V----GVVGVLLALLFAYLTSLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTIT 347
Query 339 AIDPALAFGG 348
+DP A GG
Sbjct 348 KVDPITAIGG 357
>gi|70725699|ref|YP_252613.1| hypothetical protein SH0698 [Staphylococcus haemolyticus JCSC1435]
gi|122064250|sp|Q4L8L8.1|HRTB_STAHJ RecName: Full=Putative hemin transport system permease protein
hrtB
gi|68446423|dbj|BAE04007.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length=351
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/360 (21%), Positives = 169/360 (47%), Gaps = 30/360 (8%)
Query 5 ALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAG 64
A +++++ + R + ++ L+ +M L ++GL G E +++M + ++V+
Sbjct 4 AWKEIKFYRFRYTLIMLIIFLLGSMVLFISGLAQGLARENISYLNNMPAEHYIVEDNKE- 62
Query 65 PFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVS 124
P L S +Q++ Q + ++ T++ ++V P+H P++
Sbjct 63 PKLES---SQLNQSQQNKIEKIIHENATQMGTQTLKINQQDQDVITLNTPKHLT--PKLV 117
Query 125 DGRAPSTPDEVAVSSTLGRNLGDDLQVG--------ARTLRIVGIVPESTALAKIPNIFL 176
G P +E+A+S L G+DL+VG +I GI+ ES + I +
Sbjct 118 SGNYPKKQNEIAISEKLT---GNDLKVGDTVTFKGHHHNYKISGIMNES-MYSHSSMILM 173
Query 177 TTEGLQQLAYNGQPT----ISSIGIDGMP--RQLPDGYQTVNRADAVSDLMRPLKVAVDA 230
E + L N Q + + I D +Q+ G + VN A++D + +
Sbjct 174 NKEAFKSL--NKQVSTFYPVDKINKDNKESLKQIK-GIKVVNEK-ALTDNIASYQAEQMP 229
Query 231 ITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAA 290
+ ++ + L+++ A+++ + Y+ ++++ + KAIG+ T+ +L L LQ ++ ++
Sbjct 230 LNLMIISLFVITAIVLSAFFYVMTIQKIPQIGILKAIGIKTKHLLTALLLQIILTTMVGV 289
Query 291 VVGGILSLLLAPLFPMTV--VVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGG 348
++ + L+L P+T+ + S + + + ++GL+ ++ +V+ +DP A GG
Sbjct 290 ILAFSVILILNAFMPVTMPFYLSYSQVLLMIVVFLIVGLIGALLSFIKVLKVDPIEAIGG 349
>gi|257871435|ref|ZP_05651088.1| ABC transporter permease [Enterococcus gallinarum EG2]
gi|257805599|gb|EEV34421.1| ABC transporter permease [Enterococcus gallinarum EG2]
Length=363
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/367 (26%), Positives = 169/367 (47%), Gaps = 23/367 (6%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
++ A +++++ K R + I LV + +L+GL NG ++ V G V+
Sbjct 1 MYLAWKEIRYAKLRYSLIIGIMVLVAYVVFMLSGLANGLSDGHKKAVADWGAQTIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
+ ++ + DL +V AA LA++ + + T N++ FGA +P
Sbjct 61 S-NKVASASILTRGDLSRVEAKEK--AAVGLASSAISHKGKTEKTNISVFGAEADQFVVP 117
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGA--RTLRIVGIVPESTALAKIPNIFL 176
+V DGR + +EV VS L G LGD +Q+G + IVG V ++T + +P ++L
Sbjct 118 KVIDGRNYRSTNEVIVSENLLPEGFALGDHIQLGGDDQVFTIVG-VTKATTYSVVPVLYL 176
Query 177 TTEGLQQLAYNGQPTISSIG-IDGMPRQLPDG--------YQTVNRADAVSDLMRPL-KV 226
+ QL Y Q S G I + + P QT A D + L
Sbjct 177 NLDAYAQLKYGNQEFDQSNGPISLIATKEPKSDVKLIQSKDQTKLTALTFDDFVENLPGY 236
Query 227 AVDAITVVAV--LLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVV 284
+ + +T+ A+ L++V A IVG +Y+ L++ F V KA GV T ++ + Q+++
Sbjct 237 SAEKLTLNAMVYFLFVVVAAIVGIFLYVMTLQKTALFGVLKAQGVSTGYLVRSIVGQSLI 296
Query 285 VALLAAVVGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDP 342
V++ ++ +LS L + + P M V L + + + ++ + +R V +DP
Sbjct 297 VSIAGVLIAFVLSYLTSLVLPAAMPFTVNLLQWCLYGMVLIFVSIIGGLFSIRTVTKVDP 356
Query 343 ALAFGGP 349
A GG
Sbjct 357 ITAIGGE 363
>gi|227551462|ref|ZP_03981511.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257895928|ref|ZP_05675581.1| permease [Enterococcus faecium Com12]
gi|293377033|ref|ZP_06623243.1| efflux ABC transporter, permease protein [Enterococcus faecium
PC4.1]
gi|227179406|gb|EEI60378.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecium TX1330]
gi|257832493|gb|EEV58914.1| permease [Enterococcus faecium Com12]
gi|292644249|gb|EFF62349.1| efflux ABC transporter, permease protein [Enterococcus faecium
PC4.1]
Length=357
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/367 (24%), Positives = 166/367 (46%), Gaps = 30/367 (8%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL NG E ++ +D V+
Sbjct 1 MFLAIKEIRYSKLRYGLIVGIMFLIAYVVFMLSGLANGLSEEFKKAIDDWDAQEIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F ++ + DL + AP+ I+ G + NVT FG + +P
Sbjct 61 ANQVF-AASQLTRGDLKYIEGGE----KAPIGLYSGAIK-GKNKENVTVFGTTKEAFLLP 114
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIPNIFL 176
+++ G T +E+ +S L G +GD +++G+ L IVGI PE T P I+
Sbjct 115 KLTKGHEFKTKNEIIISQNLADSGYKIGDTIKIGSYDDPLTIVGIFPE-TYYTVSPVIYA 173
Query 177 TTEGLQQLAYNGQPTISSIG--IDGMPRQLPDGYQTVNRADAVSDL-MRPLKVAVDAI-- 231
+ + L Y QP S I+G+ + D + +++ DL + + +++I
Sbjct 174 SLDTWTALKYGKQPFASEEEQPINGIV--IKDSAK-ISKEKTSKDLQLLTIGTFIESIPG 230
Query 232 --------TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAV 283
+ L++V A +VG +Y+ L++ F V KA G+ I L Q+
Sbjct 231 YSAQNMTLNAMIYFLFLVVAAVVGIFMYVMTLQKTAIFGVMKAQGIKNFFIAKSLVAQSF 290
Query 284 VVALLAAVVGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAID 341
+V ++ ++ + + L + + P M V S ++ I ++ +L + +R + +D
Sbjct 291 IVGVVGVLLALLFAYLASLILPSAMPFAVFWSQWLLYSGILIIVAMLGGLFSIRTITKVD 350
Query 342 PALAFGG 348
P A GG
Sbjct 351 PITAIGG 357
>gi|242243835|ref|ZP_04798279.1| hemin ABC superfamily ATP binding cassette transporter, membrane
protein [Staphylococcus epidermidis W23144]
gi|242232733|gb|EES35045.1| hemin ABC superfamily ATP binding cassette transporter, membrane
protein [Staphylococcus epidermidis W23144]
Length=350
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/365 (20%), Positives = 165/365 (46%), Gaps = 41/365 (11%)
Query 5 ALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAG 64
A +++++ K R ++ + L+ M L ++GL G E D + + FVV+
Sbjct 4 AWKEIKFYKFRFILIMFIIFLMAIMVLFISGLAQGLARENISIFDQIKGNQFVVQK-MKE 62
Query 65 PFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVS 124
P L + +Q +++ ++ P A T + + NV A + ++ P +
Sbjct 63 PQLEKSILSQSKQDNISK---IIDEKPFKMAGKTFKINGNEENVMAINSVKNHQ--PNLK 117
Query 125 DGRAPSTPDEVAVSSTL---GRNLGDDLQVGA--RTLRIVGIVP------------ESTA 167
G P +++A++ L G L D ++V T ++VGI+ + +
Sbjct 118 SGHYPKNENQIAINEKLTAEGLYLDDKVKVKGDDTTYKVVGILKNTMYSHSNIVMMDQSK 177
Query 168 LAKIPNI--FLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPLK 225
+ + N+ F T QL+ + + I+ I G QT D S++ K
Sbjct 178 IEQSSNVATFYVT---NQLSKSDKNKINHI----------KGVQTATTDDITSNI-ASYK 223
Query 226 VAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVV 285
+ ++ + L+++ A+++ + Y+ +++ + + KAIG+ T+ +LA L +Q ++
Sbjct 224 AEQTPLNMMIISLYVITAIVLSAFFYVMTIQKTSEIGILKAIGITTKHLLASLIIQISMI 283
Query 286 ALLAAVVGGILSLLLAPLFPMTV--VVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPA 343
+ + ++ LL++ + P+++ + + + + + ++GL+ + +++ IDP
Sbjct 284 TFIGVAIAEVVILLISKILPVSMPFHIDMHNIIIVLVVFMIVGLIGTSLSFIKLIKIDPI 343
Query 344 LAFGG 348
A GG
Sbjct 344 EAIGG 348
>gi|325571492|ref|ZP_08146992.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus casseliflavus ATCC 12755]
gi|325155968|gb|EGC68164.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus casseliflavus ATCC 12755]
Length=358
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/368 (25%), Positives = 162/368 (45%), Gaps = 31/368 (8%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL G + ++ + A V+
Sbjct 1 MFLAIKEMRYSKLRYGLIVGIMFLIAYVVFILSGLATGLNWDFKKAIVDWDSSAIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F S Q+ + R G AP+ S I NVT FG + +P
Sbjct 61 ANDTFAAS----QLTRGDLDRVEGT-QKAPIGLYSSVITVNDEQVNVTVFGTQDDAFLLP 115
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVG--ARTLRIVGIVPESTALAKIPNIFL 176
V +G+ S +E+ +S L G +GD +++G T ++VGI PE T+ P I+
Sbjct 116 EVLEGKLFSKENEITISENLAEEGIKVGDQVKIGRSDETFKVVGITPE-TSYTVSPVIYT 174
Query 177 TTEGLQQLAYNGQPT-------ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPL-KVAV 228
+ + ++ + QP I+ I ++ + T + A D + L +
Sbjct 175 SLDTWTKMKFANQPFASDKEQPINIIVTKSSDPKVDNQEGTQLKVLATEDFIEKLPGFSA 234
Query 229 DAITVVAVL--LWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVA 286
+T+ A++ L++VA IVG +Y+ L++ F V KA G+ T I + QA +V
Sbjct 235 QNLTLNAMIYFLFVVATAIVGIFMYVITLQKTAIFGVMKAQGIRTSFIAKSIIAQAFMVG 294
Query 287 LL------AAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAI 340
++ AA G SL L P L ++ I ++ +L + +R V +
Sbjct 295 VIGVALAFAAAYG--TSLFLPDAMPF--FFELKQWLLYSGILILVAVLGGLFSIRTVTKV 350
Query 341 DPALAFGG 348
DP A GG
Sbjct 351 DPITAIGG 358
>gi|257865276|ref|ZP_05644929.1| ABC transporter permease [Enterococcus casseliflavus EC30]
gi|257871604|ref|ZP_05651257.1| ABC transporter permease [Enterococcus casseliflavus EC10]
gi|257799210|gb|EEV28262.1| ABC transporter permease [Enterococcus casseliflavus EC30]
gi|257805768|gb|EEV34590.1| ABC transporter permease [Enterococcus casseliflavus EC10]
Length=358
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/368 (25%), Positives = 162/368 (45%), Gaps = 31/368 (8%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL G + ++ + A V+
Sbjct 1 MFLAIKEMRYSKLRYGLIVGIMFLIAYVVFILSGLATGLNWDFKKAIVDWDSSAIVLSED 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F S Q+ + R G AP+ S I NVT FG + +P
Sbjct 61 ANDTFAAS----QLTRGDLDRVEGT-QKAPIGLYSSVITVNDEQVNVTVFGTQDDAFLLP 115
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVG--ARTLRIVGIVPESTALAKIPNIFL 176
V +G+ S +E+ +S L G +GD +++G T ++VGI PE T+ P I+
Sbjct 116 EVLEGKLFSKENEITISENLAEEGIKVGDQVKIGRSDETFKVVGITPE-TSYTVSPVIYT 174
Query 177 TTEGLQQLAYNGQPT-------ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPL-KVAV 228
+ + ++ + QP I+ I ++ + T + A D + L +
Sbjct 175 SLDTWTKMKFANQPFASDKEQPINIIVTKSSDPKVDNQEGTQIKVLATEDFIEKLPGFSA 234
Query 229 DAITVVAVL--LWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVA 286
+T+ A++ L++VA IVG +Y+ L++ F V KA G+ T I + QA +V
Sbjct 235 QNLTLNAMIYFLFVVATAIVGIFMYVITLQKTAIFGVMKAQGIRTSFIAKSIIAQAFMVG 294
Query 287 LL------AAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAI 340
++ AA G SL L P L ++ I ++ +L + +R V +
Sbjct 295 VIGVALAFAAAYG--TSLFLPDAMPF--FFELKQWLLYSGILILVAVLGGLFSIRTVTKV 350
Query 341 DPALAFGG 348
DP A GG
Sbjct 351 DPITAIGG 358
>gi|126666275|ref|ZP_01737254.1| ABC transporter, permease protein [Marinobacter sp. ELB17]
gi|126629076|gb|EAZ99694.1| ABC transporter, permease protein [Marinobacter sp. ELB17]
Length=400
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/403 (27%), Positives = 172/403 (43%), Gaps = 59/403 (14%)
Query 1 MLFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
M+ A RD+ + V V GL+ +TL + G+ G +A+ +D+ D +VV+
Sbjct 1 MISLAGRDILQAWGKFVFTGVGLGLLIGVTLSMAGIYRGMIDDAKVLLDNSSADLWVVQK 60
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAF----GAPEH 116
GP+ + Q + PGV A + +RQG R+V A A E
Sbjct 61 DTLGPYAEPSSIYQDTWRGIRGMPGVARTANVTYLTMQVRQGE--RDVRAMIAGITAGEP 118
Query 117 G-PGMP-RVSDGRAPSTPDEVAVSSTL-GRNLGDDLQVGARTLRIVGIVPESTALAKIPN 173
G PG P + GR + AV+ G LGD LQ+ +VG+ + P
Sbjct 119 GTPGWPPYLVAGRQITRSHYEAVADIASGFELGDRLQIRRNHYTVVGLTRRMVSSGGDPM 178
Query 174 IFLTTEGLQQL--------------------AYN--GQPTISSIGIDGMPR--------- 202
IF+ + Q+ A+N G P + ID
Sbjct 179 IFIPLKDAQEAQFLKDNDAILQSRRRTEANPAFNKPGSPDLLGAVIDSQTTNTYVNAVLV 238
Query 203 QLPDGYQTVNRADAVSDLMRP----------------LKVAVDAITVVAVLLWIVAALIV 246
Q+ DGY + A+++ R + + I + V+L +V+A IV
Sbjct 239 QIEDGYSHDDVAESIRRWKRLTVYTRAQMEEILVGKLIATSAKQIGMFLVILSMVSAAIV 298
Query 247 GSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAVVGGIL-SLLLAPLFP 305
++Y L ++R+ AV K IG R+I + QA+ + ++ VVG I+ +L +AP+FP
Sbjct 299 AFIIYTLTLGKIREIAVLKLIGTRNRTIAGMILQQAIALGVIGFVVGKIVATLFMAPIFP 358
Query 306 MTVVV-PLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
V++ PL + A+ +I +L+SV + + +DPA A G
Sbjct 359 KYVLLEPLDSIFGFIAV-VLICVLSSVIAIYAALKVDPAEAIG 400
>gi|229173895|ref|ZP_04301433.1| ABC transporter, permease [Bacillus cereus MM3]
gi|228609533|gb|EEK66817.1| ABC transporter, permease [Bacillus cereus MM3]
Length=365
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/361 (24%), Positives = 167/361 (47%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAE 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFASERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G ST + V+ G ++GD + V + +IVG + + P
Sbjct 130 LEPKIVKGEKLSTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|327438346|dbj|BAK14711.1| ABC-type antimicrobial peptide transport system, permease component
[Solibacillus silvestris StLB046]
Length=370
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/370 (25%), Positives = 172/370 (47%), Gaps = 27/370 (7%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A+++++ K+R ++ L+ + +L+GL NG A T+ ++ D F+ + G
Sbjct 1 MFLAIKEMKHAKKRFMMIGAIIMLIAWLVFILSGLGNGLSSLAAATMKNIDGDLFIYEEG 60
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNV-TAFGAPEHGPGM 120
+A + + I V GV AA + ++ + V AF E G +
Sbjct 61 SAATMMKTKVTGTI-ADDVEGQFGVKEAAKFGQSTVIVKSPDAKEKVDVAFLGIEPGKFI 119
Query 121 -PRVSDGRAPSTPDE--VAVSSTL---GRNLGDDLQVGART--LRIVGIVPESTALAKIP 172
P+V G+ + D+ V + TL G +GD ++V + + L +VGI T +P
Sbjct 120 EPKVVAGKQMAAEDKMGVIIDETLQEKGYEIGDTIEVTSSSIELTVVGITKGET-FNHLP 178
Query 173 NIFLTTEGLQQLAY------NG-QPTISSIGIDGMP---RQLPDGY---QTVNRADAVSD 219
++F+ + Q A+ NG + ++ + + G ++ + Y +T +++AV
Sbjct 179 SVFVNVDVWQSYAFAAPGSDNGLESPVAMVALQGANIDADKIENNYDEIETFTKSEAVMG 238
Query 220 LMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLA 279
M K I ++ L+I++A+I+ Y+ L++ + F V KAIG I +
Sbjct 239 -MPGYKEESGTIYMMLAFLFIISAVIIAVFFYVFILQKTQQFGVMKAIGASNSFIKKSII 297
Query 280 LQAVVVALLAAVVGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRV 337
Q V++L++ + G +L+ L A +FP M + + + ++ +L SV R+V
Sbjct 298 SQVFVLSLISIIAGIVLTYLTALVFPEGMPFNLDFKMVLLYALVLLIVSVLGSVISARQV 357
Query 338 VAIDPALAFG 347
IDP A G
Sbjct 358 TKIDPLTAIG 367
>gi|163789585|ref|ZP_02184023.1| antimicrobial peptide ABC transporter permease [Carnobacterium
sp. AT7]
gi|159875117|gb|EDP69183.1| antimicrobial peptide ABC transporter permease [Carnobacterium
sp. AT7]
Length=363
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/373 (27%), Positives = 167/373 (45%), Gaps = 37/373 (9%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A +++++ K R + I LV + LTGL G + +VD DA V+
Sbjct 1 MFLAWKEIKYSKTRFALIIGVMVLVSYLVYFLTGLAYGLAQDNRTSVDKWEADAIVLTDE 60
Query 62 AAGPF-LGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQ----GTSAR-NVTAFGAPE 115
+ + F Q A+ A L APS IR+ G S++ N T FG
Sbjct 61 SNTNINMSMLTFEQ------AKEVKADETALLGLAPSVIRKVGETGESSKINATFFGIDP 114
Query 116 HGPGMPRVSDGRAPSTPDEVAVSSTLGRN----LGDDLQVGA--RTLRIVGIVPESTALA 169
MP V DGRA T DEV +L + LGD++Q+ + +++VG E+
Sbjct 115 DEFIMPEVIDGRAFETDDEVVADISLNKEDGIELGDEVQLAGSDKEVKVVGF-TENAKFN 173
Query 170 KIPNIFLTTEGLQQLAYNGQPTISSIGIDGMP-RQLPDGYQTVNRADA-------VSDLM 221
P ++ T + Q++ + + I + R D ++ V ADA + D +
Sbjct 174 VAPVLYTTIDSYQEVRFEASDDSENGRISAVVVRDSSDSFKKV-VADADDLVAYSIGDYI 232
Query 222 RPL---KVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGL 278
+ V ++ L ++AA+++G +Y+ L++ F V KA G+ + I +
Sbjct 233 FKIPGYSAQVLTFGLMIGFLIVIAAVVIGIFIYVLTLQKTSMFGVMKAQGISSGYIAKSV 292
Query 279 ALQAVVVALLAAVVGGILSLLLAPLFPMTVVVPLSA---FVA-LPAIATVIGLLASVAGL 334
Q +++ + +G L+L + F + VP S F+A + A+ VI +L ++ +
Sbjct 293 VAQTFLLSTIGVGIG--LTLTVITSFVLPAAVPYSTNWLFIAGITALLIVIAVLGALFSV 350
Query 335 RRVVAIDPALAFG 347
R VV IDP A G
Sbjct 351 RTVVKIDPLTAIG 363
>gi|229191302|ref|ZP_04318288.1| ABC transporter, permease [Bacillus cereus ATCC 10876]
gi|228592107|gb|EEK49940.1| ABC transporter, permease [Bacillus cereus ATCC 10876]
Length=365
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G +LGD + V + +IVG + + P
Sbjct 130 LEPKIVKGEKLGTANNEMVADESIKEKGIDLGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGSISQPNQKDYSAIALNA-DKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|319893321|ref|YP_004150196.1| Heme efflux system permease HrtB [Staphylococcus pseudintermedius
HKU10-03]
gi|317163017|gb|ADV06560.1| Heme efflux system permease HrtB [Staphylococcus pseudintermedius
HKU10-03]
gi|323463632|gb|ADX75785.1| ABC transporter, permease protein [Staphylococcus pseudintermedius
ED99]
Length=354
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/359 (24%), Positives = 169/359 (48%), Gaps = 26/359 (7%)
Query 5 ALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAGAAG 64
AL ++++ K + ++ L+ +M L +TGL G E +D + FV++
Sbjct 4 ALNELKFYKFKYLLITFIVILLASMVLFITGLAQGLARENIALIDQFKSERFVIQKDVDQ 63
Query 65 PFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMPRVS 124
S IDL + +APL A +T++ + ++ P+ P +
Sbjct 64 QLEKSN----IDLKTQQDIEENVKSAPLKLAMATMKHQDNKTDMLFATMPKEAR--PALK 117
Query 125 DGRAPSTPDEVAVSSTL---GRNLGDDLQVGAR--TLRIVGIVPESTALAKIPNIFLTT- 178
G P +EV ++ L G +GD + + + TL++VG + A+ NI +TT
Sbjct 118 AGHLPEKANEVVLNQKLAGEGVQIGDQVNIEDKDVTLKVVGFFDD--AMYAHTNIAMTTD 175
Query 179 EGLQQLAYNGQPTISSIGI--DGMPRQLPD-----GYQTVNRADAVSDLMRPLKVAVDAI 231
EGL+ +A GQ +S+ D +QL + G + VN+ D ++D + + +
Sbjct 176 EGLKDIA--GQHVATSLYFLNDVTAKQLKNIEGISGIEIVNKQD-LTDAIPSYQAEQAPL 232
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
++ V L+++ A+++ + Y+ +++ + + KAIGV T +L L Q + V +L +
Sbjct 233 NMMIVSLFVITAIVLTAFFYVMTIQKTSEIGILKAIGVKTSHLLWSLLFQILFVTMLGVI 292
Query 292 VGGILSLLLAPLFPMTVVVPLSAFVAL--PAIATVIGLLASVAGLRRVVAIDPALAFGG 348
+ +L L P+T+ +++ + L + ++ ++ ++ L RV IDP A GG
Sbjct 293 IALLLITGLKATLPVTMPFFINSGMMLLVVVVFIIVAIVGALLSLVRVFKIDPIEAIGG 351
>gi|229060821|ref|ZP_04198176.1| ABC transporter, permease [Bacillus cereus AH603]
gi|228718468|gb|EEL70100.1| ABC transporter, permease [Bacillus cereus AH603]
Length=354
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S Q D+ V G A P ST + S++ +V F +
Sbjct 60 DAENKLLRS-QIKQDDVDNVVNQVGEKEAVPFRVKISTYEKKDSSKKVDVAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + +I+G + + P
Sbjct 119 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIIGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A +
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMI 293
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 351
Query 348 G 348
G
Sbjct 352 G 352
>gi|257874876|ref|ZP_05654529.1| ABC transporter permease [Enterococcus casseliflavus EC20]
gi|257809042|gb|EEV37862.1| ABC transporter permease [Enterococcus casseliflavus EC20]
Length=384
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/368 (25%), Positives = 159/368 (44%), Gaps = 31/368 (8%)
Query 2 LFAALRDVQWRKRRLVIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKAG 61
+F A++++++ K R + + L+ + +L+GL G + ++ + A V+
Sbjct 27 MFLAIKEMRYSKLRYGLIVGIMFLIAYVVFILSGLATGLNWDFKKAIVDWDSSAIVLSED 86
Query 62 AAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSARNVTAFGAPEHGPGMP 121
A F S Q+ + R G AP+ S I NVT FG + +P
Sbjct 87 ANDTFAAS----QLTRGDLDRVAGT-QKAPIGLYSSVITVNDEQVNVTVFGTQDDAFLLP 141
Query 122 RVSDGRAPSTPDEVAVSSTL---GRNLGDDLQVG--ARTLRIVGIVPESTALAKIPNIFL 176
+G+ S +E+ +S L G +GD +++G T ++VGI PE T+ P I+
Sbjct 142 EALEGKLFSKENEITISENLAEEGIKVGDQVKIGRSDETFKVVGITPE-TSYTVSPVIYT 200
Query 177 TTEGLQQLAYNGQPT-------ISSIGIDGMPRQLPDGYQTVNRADAVSDLMRPL-KVAV 228
+ + ++ + QP I+ I ++ + T + A D + L +
Sbjct 201 SLDTWTKMKFANQPFASDKEQPINIIVTKSSDPKVDNQEGTQLKVLATEDFIEKLPGFSA 260
Query 229 DAITVVAVL--LWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVA 286
+T+ A++ L++VA IVG +Y+ L++ F V KA G+ T I + QA +V
Sbjct 261 QNLTLNAMIYFLFVVATAIVGIFMYVITLQKTAIFGVMKAQGIRTSFIAKSIIAQAFMVG 320
Query 287 LL------AAVVGGILSLLLAPLFPMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAI 340
++ AA G SL L P ++ I ++ L + +R V +
Sbjct 321 VIGVALAFAAAYG--TSLFLPDAMPF--FFEFKQWLLYSGILILVAFLGGLFSIRTVTKV 376
Query 341 DPALAFGG 348
DP A GG
Sbjct 377 DPITAIGG 384
>gi|229030921|ref|ZP_04186940.1| ABC transporter, permease [Bacillus cereus AH1271]
gi|228730415|gb|EEL81376.1| ABC transporter, permease [Bacillus cereus AH1271]
Length=354
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/359 (23%), Positives = 163/359 (46%), Gaps = 19/359 (5%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G T + V+ G ++GD + V + IVG + + P
Sbjct 119 LEPNIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVIQALFLSVVAMV 293
Query 292 VGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGG 348
+ +L L + P M ++ V AI VI +L ++ L +V+ +D A GG
Sbjct 294 ISIVLVQGLQQILPAGMPFLLTTPMIVQYAAIFIVISILGTLISLYQVLKVDALEAIGG 352
>gi|229167893|ref|ZP_04295624.1| ABC transporter, permease [Bacillus cereus AH621]
gi|228615533|gb|EEK72627.1| ABC transporter, permease [Bacillus cereus AH621]
Length=354
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 60 DAENKLLRS-QIKKEDVDNVVNQAGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + +IVG + + P
Sbjct 119 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A +
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMI 293
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 351
Query 348 G 348
G
Sbjct 352 G 352
>gi|228986317|ref|ZP_04146454.1| ABC transporter, permease [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228773344|gb|EEM21773.1| ABC transporter, permease [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length=365
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVSQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDTF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G ST + V+ G ++GD + V + +IVG + + P
Sbjct 130 LEPNIVKGEKLSTANNKMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|229012453|ref|ZP_04169628.1| ABC transporter, permease [Bacillus mycoides DSM 2048]
gi|228748812|gb|EEL98662.1| ABC transporter, permease [Bacillus mycoides DSM 2048]
Length=354
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + +IVG + + P
Sbjct 119 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 293
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 351
Query 348 G 348
G
Sbjct 352 G 352
>gi|229134073|ref|ZP_04262893.1| ABC transporter, permease [Bacillus cereus BDRD-ST196]
gi|228649408|gb|EEL05423.1| ABC transporter, permease [Bacillus cereus BDRD-ST196]
Length=365
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVSQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + +IVG + + P
Sbjct 130 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|326940956|gb|AEA16852.1| ABC transporter permease protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length=354
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 165/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G T + V+ G ++GD + V + +IVG + + P
Sbjct 119 LEPNIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 293
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 351
Query 348 G 348
G
Sbjct 352 G 352
>gi|228940318|ref|ZP_04102889.1| ABC transporter, permease [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228973234|ref|ZP_04133823.1| ABC transporter, permease [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228979797|ref|ZP_04140119.1| ABC transporter, permease [Bacillus thuringiensis Bt407]
gi|228779951|gb|EEM28196.1| ABC transporter, permease [Bacillus thuringiensis Bt407]
gi|228786430|gb|EEM34420.1| ABC transporter, permease [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228819444|gb|EEM65498.1| ABC transporter, permease [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length=365
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 165/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G T + V+ G ++GD + V + +IVG + + P
Sbjct 130 LEPNIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFKIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|229162126|ref|ZP_04290097.1| ABC transporter, permease [Bacillus cereus R309803]
gi|228621333|gb|EEK78188.1| ABC transporter, permease [Bacillus cereus R309803]
Length=365
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 164/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 71 DAENKLLRS-QIKKEDVDNVVNQAGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G T + V+ G ++GD + V + IVG + + P
Sbjct 130 LEPNIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|229080446|ref|ZP_04212967.1| ABC transporter, permease [Bacillus cereus Rock4-2]
gi|228702748|gb|EEL55213.1| ABC transporter, permease [Bacillus cereus Rock4-2]
Length=365
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 165/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + IVG + + P
Sbjct 130 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|229156829|ref|ZP_04284916.1| ABC transporter, permease [Bacillus cereus ATCC 4342]
gi|228626749|gb|EEK83489.1| ABC transporter, permease [Bacillus cereus ATCC 4342]
Length=365
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 166/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + IVG + + + P
Sbjct 130 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFMKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|228953538|ref|ZP_04115581.1| ABC transporter, permease [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228806122|gb|EEM52698.1| ABC transporter, permease [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length=365
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/361 (23%), Positives = 165/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 12 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 70
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 71 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDSF 129
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + IVG + + P
Sbjct 130 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 188
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 189 VVYVNEDVWGSISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 244
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 245 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 304
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 305 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 362
Query 348 G 348
G
Sbjct 363 G 363
>gi|217960658|ref|YP_002339222.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
gi|217066909|gb|ACJ81159.1| putative ABC transporter, permease protein [Bacillus cereus AH187]
Length=354
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/359 (23%), Positives = 163/359 (46%), Gaps = 19/359 (5%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDTF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G+ T + V+ G ++GD + V + IVG + + P
Sbjct 119 LEPNIVKGKKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + + Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAITQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A +
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMI 293
Query 292 VGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGG 348
+ +L L + P M ++ V AI VI +L ++ L +V+ +D A GG
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIVQYAAIFIVISILGTLISLYQVLKVDALEAIGG 352
>gi|222096713|ref|YP_002530770.1| ABC transporter permease [Bacillus cereus Q1]
gi|221240771|gb|ACM13481.1| ABC transporter, permease [Bacillus cereus Q1]
Length=354
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/359 (23%), Positives = 163/359 (46%), Gaps = 19/359 (5%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ ++ F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVNQVGEKEAVPFRVKVSTYEKKDSSKKVDIAIFSSERDTF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P + G+ T + V+ G ++GD + V + IVG + + P
Sbjct 119 LEPNIVKGKKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + + Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAITQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A +
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMI 293
Query 292 VGGILSLLLAPLFP--MTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFGG 348
+ +L L + P M ++ V AI VI +L ++ L +V+ +D A GG
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIVQYAAIFIVISILGTLISLYQVLKVDALEAIGG 352
>gi|229018478|ref|ZP_04175340.1| ABC transporter, permease [Bacillus cereus AH1273]
gi|229024734|ref|ZP_04181173.1| ABC transporter, permease [Bacillus cereus AH1272]
gi|228736577|gb|EEL87133.1| ABC transporter, permease [Bacillus cereus AH1272]
gi|228742830|gb|EEL92968.1| ABC transporter, permease [Bacillus cereus AH1273]
Length=354
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/361 (23%), Positives = 165/361 (46%), Gaps = 23/361 (6%)
Query 2 LFAALRDVQWRKRRL-VIAIVSTGLVFAMTLVLTGLVNGFRVEAERTVDSMGVDAFVVKA 60
+F ALR+++ K R +I ++ L F + LV++GL NG + ++ +M + FV+
Sbjct 1 MFLALRELKQSKLRYGLIGLIMVLLSF-LVLVISGLANGLSYDNASSIQNMEANKFVLAD 59
Query 61 GAAGPFLGSTPFAQIDLPQVARAPGVLAAAPLATAPSTIRQGTSAR--NVTAFGAPEHGP 118
A L S + D+ V G A P ST + S++ +V F +
Sbjct 60 DAENKLLRS-QIKKDDVDNVVSQVGEKEAVPFRVKVSTYEKKDSSKKVDVAIFSSERDSF 118
Query 119 GMPRVSDGRAPSTPDEVAVS----STLGRNLGDDLQ--VGARTLRIVGIVPESTALAKIP 172
P++ G T + V+ G ++GD + V + IVG + + P
Sbjct 119 LEPKIVKGEKLGTANNEMVADESIKEKGIDIGDTIIDPVSKKEFTIVGFTKDQM-FSHTP 177
Query 173 NIFLTTEGLQQLAYNGQPTISSIGIDGMPRQLPDGYQTVNRADAVSDLMRP-LKVAVDAI 231
+++ + ++ Q S+I ++ +++ + + +++ + + + P K +
Sbjct 178 VVYVNEDVWGAISQPNQKDYSAIALN-TDKEIKNAH-VIDKKEVLQSI--PGFKEEQGTL 233
Query 232 TVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILAGLALQAVVVALLAAV 291
T++ L ++AAL++G Y+ L++ + V KAIG + L +QA+ ++++A V
Sbjct 234 TMIIAFLLVIAALLIGVFFYVITLQKTQQLGVLKAIGTKNSYLANSLVVQALFLSVVAMV 293
Query 292 VGGILSLLLAPLF----PMTVVVPLSAFVALPAIATVIGLLASVAGLRRVVAIDPALAFG 347
+ +L L + P + P+ A A AI VI +L ++ L +V+ +D A G
Sbjct 294 ISIVLVQGLEQILPAGMPFLLTTPMIAQYA--AIFIVISILGTLISLYQVLKVDALEAIG 351
Query 348 G 348
G
Sbjct 352 G 352
Lambda K H
0.323 0.138 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 645334497412
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40