BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2568c Length=341 Score E Sequences producing significant alignments: (Bits) Value gi|15609705|ref|NP_217084.1| hypothetical protein Rv2568c [Mycob... 706 0.0 gi|308378409|ref|ZP_07668740.1| hypothetical protein TMIG_03329 ... 705 0.0 gi|240173267|ref|ZP_04751925.1| hypothetical protein MkanA1_2840... 573 1e-161 gi|41407167|ref|NP_960003.1| hypothetical protein MAP1069 [Mycob... 572 4e-161 gi|336461502|gb|EGO40370.1| hypothetical protein MAPs_29900 [Myc... 571 5e-161 gi|254821826|ref|ZP_05226827.1| hypothetical protein MintA_17972... 571 5e-161 gi|118463725|ref|YP_882620.1| hypothetical protein MAV_3437 [Myc... 570 8e-161 gi|183982176|ref|YP_001850467.1| hypothetical protein MMAR_2163 ... 568 5e-160 gi|342858617|ref|ZP_08715272.1| hypothetical protein MCOL_07066 ... 566 2e-159 gi|296170794|ref|ZP_06852365.1| conserved hypothetical protein [... 565 4e-159 gi|118617367|ref|YP_905699.1| hypothetical protein MUL_1747 [Myc... 561 5e-158 gi|54289548|gb|AAV32082.1| uncharacterized conserved protein [My... 561 8e-158 gi|118469518|ref|YP_887337.1| hypothetical protein MSMEG_3019 [M... 506 2e-141 gi|145224350|ref|YP_001135028.1| hypothetical protein Mflv_3768 ... 502 3e-140 gi|315444682|ref|YP_004077561.1| hypothetical protein Mspyr1_310... 502 4e-140 gi|120403616|ref|YP_953445.1| hypothetical protein Mvan_2631 [My... 496 3e-138 gi|126434947|ref|YP_001070638.1| hypothetical protein Mjls_2362 ... 482 3e-134 gi|108799290|ref|YP_639487.1| hypothetical protein Mmcs_2323 [My... 481 6e-134 gi|169629940|ref|YP_001703589.1| hypothetical protein MAB_2856c ... 480 1e-133 gi|312198313|ref|YP_004018374.1| hypothetical protein FraEuI1c_4... 422 6e-116 gi|296394005|ref|YP_003658889.1| hypothetical protein Srot_1596 ... 412 3e-113 gi|343924127|ref|ZP_08763690.1| hypothetical protein GOALK_002_0... 407 9e-112 gi|258653472|ref|YP_003202628.1| hypothetical protein Namu_3310 ... 407 2e-111 gi|296394985|ref|YP_003659869.1| hypothetical protein Srot_2603 ... 406 2e-111 gi|111018045|ref|YP_701017.1| hypothetical protein RHA1_ro01032 ... 402 5e-110 gi|333918501|ref|YP_004492082.1| hypothetical protein AS9A_0830 ... 399 5e-109 gi|270261841|ref|ZP_06190113.1| putative cytoplasmic protein [Se... 395 4e-108 gi|333927237|ref|YP_004500816.1| hypothetical protein SerAS12_23... 395 5e-108 gi|262202991|ref|YP_003274199.1| hypothetical protein Gbro_3100 ... 386 4e-105 gi|317509231|ref|ZP_07966852.1| hypothetical protein HMPREF9336_... 365 5e-99 gi|317507309|ref|ZP_07965050.1| hypothetical protein HMPREF9336_... 346 3e-93 gi|311744124|ref|ZP_07717930.1| conserved hypothetical protein [... 320 2e-85 gi|111220637|ref|YP_711431.1| hypothetical protein FRAAL1176 [Fr... 312 4e-83 gi|323356658|ref|YP_004223054.1| hypothetical protein MTES_0210 ... 308 8e-82 gi|170692998|ref|ZP_02884159.1| conserved hypothetical protein [... 303 2e-80 gi|326328626|ref|ZP_08194966.1| hypothetical protein NBCG_00064 ... 298 7e-79 gi|330820541|ref|YP_004349403.1| hypothetical protein bgla_2g144... 297 2e-78 gi|295700100|ref|YP_003607993.1| hypothetical protein BC1002_450... 294 2e-77 gi|187919120|ref|YP_001888151.1| hypothetical protein Bphyt_4405... 291 8e-77 gi|296157014|ref|ZP_06839851.1| protein of unknown function UCP0... 289 5e-76 gi|91779372|ref|YP_554580.1| hypothetical protein Bxe_B0724 [Bur... 288 7e-76 gi|238024603|ref|YP_002908835.1| hypothetical protein bglu_2g121... 288 7e-76 gi|344201228|ref|YP_004785554.1| hypothetical protein Acife_3162... 288 1e-75 gi|333901142|ref|YP_004475015.1| protein of unknown function UCP... 287 1e-75 gi|323528552|ref|YP_004230704.1| hypothetical protein BC1001_424... 287 2e-75 gi|312962449|ref|ZP_07776940.1| hypothetical protein PFWH6_4369 ... 286 5e-75 gi|70729276|ref|YP_259013.1| hypothetical protein PFL_1894 [Pseu... 285 9e-75 gi|120555946|ref|YP_960297.1| hypothetical protein Maqu_3036 [Ma... 284 1e-74 gi|289679602|ref|ZP_06500492.1| hypothetical protein PsyrpsF_402... 283 2e-74 gi|302185109|ref|ZP_07261782.1| hypothetical protein Psyrps6_021... 283 3e-74 >gi|15609705|ref|NP_217084.1| hypothetical protein Rv2568c [Mycobacterium tuberculosis H37Rv] gi|15842106|ref|NP_337143.1| hypothetical protein MT2644 [Mycobacterium tuberculosis CDC1551] gi|31793751|ref|NP_856244.1| hypothetical protein Mb2598c [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=341 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/341 (100%), Positives = 341/341 (100%), Gaps = 0/341 (0%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV 60 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV Sbjct 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV 60 Query 61 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH 120 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH Sbjct 61 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH 120 Query 121 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY 180 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY Sbjct 121 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY 180 Query 181 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW 240 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW Sbjct 181 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW 240 Query 241 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM 300 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM Sbjct 241 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM 300 Query 301 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV 341 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV Sbjct 301 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV 341 >gi|308378409|ref|ZP_07668740.1| hypothetical protein TMIG_03329 [Mycobacterium tuberculosis SUMu009] gi|308379244|ref|ZP_07668927.1| hypothetical protein TMJG_01548 [Mycobacterium tuberculosis SUMu010] gi|308352644|gb|EFP41495.1| hypothetical protein TMIG_03329 [Mycobacterium tuberculosis SUMu009] gi|308357647|gb|EFP46498.1| hypothetical protein TMJG_01548 [Mycobacterium tuberculosis SUMu010] Length=351 Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/341 (100%), Positives = 341/341 (100%), Gaps = 0/341 (0%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV 60 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV Sbjct 11 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV 70 Query 61 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH 120 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH Sbjct 71 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH 130 Query 121 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY 180 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY Sbjct 131 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY 190 Query 181 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW 240 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW Sbjct 191 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW 250 Query 241 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM 300 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM Sbjct 251 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM 310 Query 301 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV 341 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV Sbjct 311 GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV 351 >gi|240173267|ref|ZP_04751925.1| hypothetical protein MkanA1_28401 [Mycobacterium kansasii ATCC 12478] Length=342 Score = 573 bits (1478), Expect = 1e-161, Method: Compositional matrix adjust. Identities = 277/338 (82%), Positives = 292/338 (87%), Gaps = 10/338 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDA----------DVQLCAN 50 MRDFHCP+CGQRL FENS CLSCGSALGFSL RMALLVIA+ + QLCAN Sbjct 4 MRDFHCPSCGQRLTFENSVCLSCGSALGFSLDRMALLVIAERGVGHAGAVPADEYQLCAN 63 Query 51 LHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLP 110 LHLAQCNWLVP + GLC+SC LT+ERP+D +T GLA FARAE AKRRLIAELHELKLP Sbjct 64 LHLAQCNWLVPVNHANGLCTSCALTVERPNDVDTVGLAGFARAEAAKRRLIAELHELKLP 123 Query 111 IVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLL 170 IVGRDQDPDHGLAFRLLSSAHE V TGH +GVITLDLAEGDDVHREQLRVEMDEPYRTLL Sbjct 124 IVGRDQDPDHGLAFRLLSSAHEQVITGHADGVITLDLAEGDDVHREQLRVEMDEPYRTLL 183 Query 171 GHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSS 230 GHFRHEIGHYYFYRLI S D+ +RF ELFGDPDADY QALDRHYR G P+GWQD FVSS Sbjct 184 GHFRHEIGHYYFYRLIDPSGDHRARFTELFGDPDADYQQALDRHYRDGAPQGWQDRFVSS 243 Query 231 YATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLS 290 YATMH +EDWAETFAHYLHIRD LDTAAWCG APASATFDRPALGPSAF IID WLPLS Sbjct 244 YATMHPAEDWAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPAIIDMWLPLS 303 Query 291 WSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 WSLNMVNRSMGHDDLYPFVLP AVL KM+FIH V+DEV Sbjct 304 WSLNMVNRSMGHDDLYPFVLPPAVLAKMQFIHAVIDEV 341 >gi|41407167|ref|NP_960003.1| hypothetical protein MAP1069 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775884|ref|ZP_05217400.1| hypothetical protein MaviaA2_14610 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395518|gb|AAS03386.1| hypothetical protein MAP_1069 [Mycobacterium avium subsp. paratuberculosis K-10] Length=340 Score = 572 bits (1473), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 276/337 (82%), Positives = 297/337 (89%), Gaps = 11/337 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD-----------ADVQLCA 49 MRDF CP CGQRL FENS CL+CGSALGFS+ +MALLVI++D ++ QLCA Sbjct 1 MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL LA+CNWLVP ++ LC+SCVLT ERP+D ++ GLAEFARAE AKRRLIAELHEL+L Sbjct 61 NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRDQDPD+GLAFRLLSSAHENV TGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL Sbjct 121 PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA D+L RFNELFGDPDADY QALDRHY G PEGWQ++FVS Sbjct 181 LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMHASEDWAETFAHYLHIRD LDT+AWCGLAPASAT DRPALGPSAF TIID WLPL Sbjct 241 SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD 326 SWSLNMVNRSMGHDDLYPFVLPAAVLEKM+FIH VVD Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVD 337 >gi|336461502|gb|EGO40370.1| hypothetical protein MAPs_29900 [Mycobacterium avium subsp. paratuberculosis S397] Length=340 Score = 571 bits (1472), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 276/337 (82%), Positives = 297/337 (89%), Gaps = 11/337 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD-----------ADVQLCA 49 MRDF CP CGQRL FENS CL+CGSALGFS+ +MALLVI++D ++ QLCA Sbjct 1 MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDDTSGHAGFVPASEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL LA+CNWLVP ++ LC+SCVLT ERP+D ++ GLAEFARAE AKRRLIAELHEL+L Sbjct 61 NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRDQDPD+GLAFRLLSSAHENV TGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL Sbjct 121 PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA D+L RFNELFGDPDADY QALDRHY G PEGWQ++FVS Sbjct 181 LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQALDRHYSEGAPEGWQENFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMHASEDWAETFAHYLHIRD LDT+AWCGLAPASAT DRPALGPSAF TIID WLPL Sbjct 241 SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD 326 SWSLNMVNRSMGHDDLYPFVLPAAVLEKM+FIH VVD Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMQFIHAVVD 337 >gi|254821826|ref|ZP_05226827.1| hypothetical protein MintA_17972 [Mycobacterium intracellulare ATCC 13950] Length=351 Score = 571 bits (1472), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 276/342 (81%), Positives = 295/342 (87%), Gaps = 11/342 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD-----------ADVQLCA 49 MRDF CPNCGQRL FENS CL+CGSALGFSL +MALLVI+D ++ QLCA Sbjct 1 MRDFTCPNCGQRLTFENSTCLNCGSALGFSLEQMALLVISDGEATEHAGVVPASEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL +A+CNWLVP + LC+SC LT ERP+D + GLAEFARAE AKRRLIAELHELKL Sbjct 61 NLQVAECNWLVPVNTPRLLCASCALTAERPNDADAVGLAEFARAEAAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD+DPD+GLAFRLLSSAHENV TGHQNGVIT+DLAEGDDVHREQLRVEMDEPYRTL Sbjct 121 PIVGRDKDPDYGLAFRLLSSAHENVMTGHQNGVITIDLAEGDDVHREQLRVEMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYY+YRLIA D L RFNELFGDPDADY ALDRHY G P+GWQD FVS Sbjct 181 LGHFRHEIGHYYYYRLIAPYRDRLERFNELFGDPDADYQAALDRHYSEGAPDGWQDHFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMHASEDWAETFAHYLHIRDALDT+AWCGLA ASATFDRPALGPSAF TIID WLPL Sbjct 241 SYATMHASEDWAETFAHYLHIRDALDTSAWCGLAAASATFDRPALGPSAFQTIIDMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPD 331 SWSLNMVNRSMGHDDLYPFVLPAAVLEKM+FIHTVVDE + Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMKFIHTVVDEATSE 342 >gi|118463725|ref|YP_882620.1| hypothetical protein MAV_3437 [Mycobacterium avium 104] gi|118165012|gb|ABK65909.1| conserved hypothetical protein [Mycobacterium avium 104] Length=340 Score = 570 bits (1470), Expect = 8e-161, Method: Compositional matrix adjust. Identities = 274/337 (82%), Positives = 297/337 (89%), Gaps = 11/337 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD-----------ADVQLCA 49 MRDF CP CGQRL FENS CL+CGSALGFS+ +MALLVI++D ++ QLCA Sbjct 1 MRDFTCPKCGQRLTFENSTCLNCGSALGFSIEQMALLVISEDETSGHAGFVPASEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL LA+CNWLVP ++ LC+SCVLT ERP+D ++ GLAEFARAE AKRRLIAELHEL+L Sbjct 61 NLLLAECNWLVPVNEPRLLCASCVLTTERPNDADSVGLAEFARAEAAKRRLIAELHELRL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRDQDPD+GLAFRLLSSAHENV TGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL Sbjct 121 PIVGRDQDPDYGLAFRLLSSAHENVLTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA D+L RFNELFGDPDADY Q+LDRHY G PEGWQ++FVS Sbjct 181 LGHFRHEIGHYYFYRLIAPHPDHLRRFNELFGDPDADYQQSLDRHYSEGAPEGWQENFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMHASEDWAETFAHYLHIRD LDT+AWCGLAPASAT DRPALGPSAF TIID WLPL Sbjct 241 SYATMHASEDWAETFAHYLHIRDTLDTSAWCGLAPASATIDRPALGPSAFQTIIDTWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD 326 SWSLNMVNRSMGHDDLYPFVLPAAV+EKM+FIH VVD Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPAAVMEKMQFIHAVVD 337 >gi|183982176|ref|YP_001850467.1| hypothetical protein MMAR_2163 [Mycobacterium marinum M] gi|183175502|gb|ACC40612.1| conserved hypothetical protein [Mycobacterium marinum M] Length=351 Score = 568 bits (1464), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 275/339 (82%), Positives = 295/339 (88%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA--DDA---------DVQLCA 49 MRDFHCPNCGQRLAFENSACLSCGSALGFSL +MAL+VI D + D QLC Sbjct 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLDQMALMVITGRDQSEHAGSVAADDYQLCK 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NLHLA+CNWLVP + GLC SCVLT+ RP D +T GL EFARAE AKRRLIAELHELKL Sbjct 61 NLHLAECNWLVPVGRRDGLCESCVLTVLRPHDGDTVGLTEFARAEAAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PI+GRD+DP +GLAFRLLSSAHENV TGH++GVITLDLAEGDDVHREQLRVEM+EPYRTL Sbjct 121 PIIGRDEDPAYGLAFRLLSSAHENVITGHEDGVITLDLAEGDDVHREQLRVEMEEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA S D+L+RF ELFGDPDADY ALDRHYR G PE WQ+ +VS Sbjct 181 LGHFRHEIGHYYFYRLIAPSDDHLARFRELFGDPDADYQAALDRHYRDGAPENWQERYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAAWCG APASATFDRPALGPSAF TIID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPTIIDMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 SWSLNMVNRSMGHDDLYPFVLP AVLEKMRF+HTVVD+V Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPVAVLEKMRFVHTVVDQV 339 >gi|342858617|ref|ZP_08715272.1| hypothetical protein MCOL_07066 [Mycobacterium colombiense CECT 3035] gi|342134321|gb|EGT87501.1| hypothetical protein MCOL_07066 [Mycobacterium colombiense CECT 3035] Length=351 Score = 566 bits (1459), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 270/342 (79%), Positives = 295/342 (87%), Gaps = 11/342 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADD-----------ADVQLCA 49 MRDF CPNCGQRL FENS CL+CGSALGFSL +MALLVI++D ++ QLCA Sbjct 1 MRDFTCPNCGQRLTFENSTCLNCGSALGFSLDQMALLVISEDDATEHAGFVHASEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL LA+CNWLVP + LC+SC LTIERP+D +T G+AEFARAE AKRRLIAELHELKL Sbjct 61 NLLLAECNWLVPVNNPRLLCTSCALTIERPNDADTVGMAEFARAEAAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD DPD+GLAFRLLSSAHE V TGH+NGVIT+DLAEGDD HREQLRVEMDEPYRTL Sbjct 121 PIVGRDSDPDYGLAFRLLSSAHEKVLTGHENGVITIDLAEGDDAHREQLRVEMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYY+YRLIA +DY+ RFNELFGD +ADY +ALDRHY G PEGWQ+ FVS Sbjct 181 LGHFRHEIGHYYYYRLIAPFADYVQRFNELFGDHEADYQEALDRHYSEGAPEGWQEDFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDT+AWCGLAPASATFDRPALGPSAF TIID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTSAWCGLAPASATFDRPALGPSAFQTIIDMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPD 331 SWSLNMVNRSMGHDDLYPFVLP VLEKM+FIHTVVDEV + Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPVTVLEKMKFIHTVVDEVTSE 342 >gi|296170794|ref|ZP_06852365.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894530|gb|EFG74268.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=351 Score = 565 bits (1456), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 273/342 (80%), Positives = 293/342 (86%), Gaps = 11/342 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA-----------DDADVQLCA 49 MRDF+CPNCGQRL FENS CL+CGSALGFSL +MALLVIA D A+ QLCA Sbjct 1 MRDFNCPNCGQRLTFENSTCLNCGSALGFSLDQMALLVIAEENAGEHAGFVDAAEYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL LA+CNWLVP + LC+SC LT RP+D + AGLAEFARAE AKRRLIAELHELKL Sbjct 61 NLLLAECNWLVPVNNPRLLCASCALTTVRPNDADPAGLAEFARAEAAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PI+GRD+DP+ GLAF LLSSAHE V TGH NGVITLDLAEGDDVHREQLRVEM+EPYRTL Sbjct 121 PIIGRDEDPEQGLAFHLLSSAHEQVLTGHDNGVITLDLAEGDDVHREQLRVEMEEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA S +YL+RFNELFGDPDADY ALDRHY GPPE WQ+ FVS Sbjct 181 LGHFRHEIGHYYFYRLIAPSGEYLARFNELFGDPDADYQAALDRHYSEGPPEDWQEHFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDT+AWCG APASATFDRPALGPSAF TIID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTSAWCGFAPASATFDRPALGPSAFQTIIDMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPD 331 SWSLNMVNRSMGHDDLYPFVLP AVLEKMRFIHTV+DEV + Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPVAVLEKMRFIHTVIDEVTSE 342 >gi|118617367|ref|YP_905699.1| hypothetical protein MUL_1747 [Mycobacterium ulcerans Agy99] gi|118569477|gb|ABL04228.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=351 Score = 561 bits (1447), Expect = 5e-158, Method: Compositional matrix adjust. Identities = 272/339 (81%), Positives = 292/339 (87%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA--DDA---------DVQLCA 49 MRDFHCPNCGQRL FENSACLSCGSALGFSL +MAL+VI D + D QLC Sbjct 1 MRDFHCPNCGQRLTFENSACLSCGSALGFSLDQMALMVITGRDQSEHAGAVAADDYQLCK 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NLHLA+C+WLVP Q GLC SCVLT+ RP D +T GL EFARAE AKRRLIAELHELKL Sbjct 61 NLHLAECSWLVPVGQRDGLCESCVLTVLRPHDGDTVGLTEFARAEAAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PI+GRD+DP +GLAFRLLSSAHENV TGH++GVITLDLAEGDDVHR QLRVEM+EPYRTL Sbjct 121 PIIGRDEDPAYGLAFRLLSSAHENVITGHEDGVITLDLAEGDDVHRGQLRVEMEEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLIA S D+L+RF ELFGDPDADY ALDRHY G PE WQ+ +VS Sbjct 181 LGHFRHEIGHYYFYRLIAPSDDHLARFRELFGDPDADYQAALDRHYSDGAPENWQERYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAAWCG APASATFDRPALGPSAF TIID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPTIIDMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 SWSLNMVNRSMGHDDLYPFVLP AVLEKMRF+HTVVD+V Sbjct 301 SWSLNMVNRSMGHDDLYPFVLPVAVLEKMRFVHTVVDQV 339 >gi|54289548|gb|AAV32082.1| uncharacterized conserved protein [Mycobacterium marinum] Length=350 Score = 561 bits (1445), Expect = 8e-158, Method: Compositional matrix adjust. Identities = 271/336 (81%), Positives = 292/336 (87%), Gaps = 11/336 (3%) Query 4 FHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA--DDA---------DVQLCANLH 52 +HCPNCGQRLAFENSACLSCGSALGFSL +MAL+VI D + D QLC NLH Sbjct 3 YHCPNCGQRLAFENSACLSCGSALGFSLDQMALMVITGRDQSEHAGSVAADDYQLCKNLH 62 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 LA+CNWLVP + GLC SCVLT+ RP D +T GL EFARAE AKRRLIAELHELKLPI+ Sbjct 63 LAECNWLVPVGRRDGLCESCVLTVLRPHDGDTVGLTEFARAEAAKRRLIAELHELKLPII 122 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 GRD+DP +GLAFRLLSSAHENV TGH++GVITLDLAEGDDVHREQLRVEM+EPYRTLLGH Sbjct 123 GRDEDPAYGLAFRLLSSAHENVITGHEDGVITLDLAEGDDVHREQLRVEMEEPYRTLLGH 182 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHEIGHYYFYRLIA S D+L+RF ELFGDPDADY ALDRHYR G PE WQ+ +VSSYA Sbjct 183 FRHEIGHYYFYRLIAPSDDHLARFRELFGDPDADYQAALDRHYRDGAPENWQERYVSSYA 242 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWS 292 TMH +EDWAETFAHYLHIRD LDTAAWCG APASATFDRPALGPSAF TIID WLPLSWS Sbjct 243 TMHPAEDWAETFAHYLHIRDTLDTAAWCGFAPASATFDRPALGPSAFPTIIDMWLPLSWS 302 Query 293 LNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 LNMVNRSMGHDDLYPFVLP AVLEKMRF+HTVVD+V Sbjct 303 LNMVNRSMGHDDLYPFVLPVAVLEKMRFVHTVVDQV 338 >gi|118469518|ref|YP_887337.1| hypothetical protein MSMEG_3019 [Mycobacterium smegmatis str. MC2 155] gi|118170805|gb|ABK71701.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=342 Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 251/339 (75%), Positives = 280/339 (83%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVI-----------ADDADVQLCA 49 MRDF CPNCGQRLAFENS CLSCGSALGFSL MALLVI D+ +LCA Sbjct 1 MRDFTCPNCGQRLAFENSLCLSCGSALGFSLSDMALLVITEKDQSDHAGAVDEQKYKLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NL+ A+CNWLV + LC SC LT RP+D++T +A FA AE AKRRLI ELHELKL Sbjct 61 NLYAAECNWLVRVGEGDELCESCALTRTRPADSDTKAMAAFAGAERAKRRLIVELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIV R +DP++GLAF LLSS + V TGH+NGVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVSRAEDPEYGLAFDLLSSEFDKVFTGHENGVITLDLAEGDDVHREQLRIAMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRL+A S+++ ++FNELFGDPDADY ALDRHY+ GPP GW+D FVS Sbjct 181 LGHFRHEIGHYYFYRLVAPSAEFTAKFNELFGDPDADYQAALDRHYQDGPPAGWEDDFVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMHA+EDWAETFAHYLHIRD LDTAA G APA ATFDR ALGPSAF+TII+ WLPL Sbjct 241 SYATMHAAEDWAETFAHYLHIRDTLDTAAAFGFAPAGATFDRRALGPSAFDTIIEMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 +WSLNMVNRSMGHDDLYPFVLP AVLEKMRF+HTV+DEV Sbjct 301 AWSLNMVNRSMGHDDLYPFVLPPAVLEKMRFVHTVIDEV 339 >gi|145224350|ref|YP_001135028.1| hypothetical protein Mflv_3768 [Mycobacterium gilvum PYR-GCK] gi|145216836|gb|ABP46240.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=361 Score = 502 bits (1292), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 243/339 (72%), Positives = 269/339 (80%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA-----------DDADVQLCA 49 MRDF CPNCGQRL+FENS CL+C SALGFSL MALLVIA D+ + QLCA Sbjct 1 MRDFTCPNCGQRLSFENSVCLNCKSALGFSLDDMALLVIAPTEESEHAGAVDEREYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NLHLA+CNWLV + LC SC LT RP+D + LA FA AE AKRRLIAEL ELKL Sbjct 61 NLHLAECNWLVEKGPIAKLCVSCALTRTRPNDADVVALAAFATAESAKRRLIAELCELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD DP GLAF LLSS E V TGH+NGVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVGRDLDPQFGLAFDLLSSQFEKVFTGHENGVITLDLAEGDDVHREQLRISMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYY YRLI +S DYL R++ELFGDP+ADY ALDRHY G P GW+ +VS Sbjct 181 LGHFRHEIGHYYQYRLIGTSQDYLDRYHELFGDPEADYQAALDRHYSEGAPAGWEQDYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAA G APA+AT+DR LGPS F+T+ID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPATATYDRRVLGPSGFDTLIDLWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 SW+LN VNRSMG +D+YPFVLP VLEKMRFIHTV+DE+ Sbjct 301 SWALNQVNRSMGKEDVYPFVLPPPVLEKMRFIHTVIDEI 339 >gi|315444682|ref|YP_004077561.1| hypothetical protein Mspyr1_31090 [Mycobacterium sp. Spyr1] gi|315262985|gb|ADT99726.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=361 Score = 502 bits (1292), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 243/339 (72%), Positives = 269/339 (80%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA-----------DDADVQLCA 49 MRDF CPNCGQRL+FENS CL+C SALGFSL MALLVIA D+ + QLCA Sbjct 1 MRDFTCPNCGQRLSFENSVCLNCKSALGFSLDDMALLVIAPTEESEHAGAVDEREYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NLHLA+CNWLV + LC SC LT RP+D + LA FA AE AKRRLIAEL ELKL Sbjct 61 NLHLAECNWLVEKGPIAKLCVSCALTRTRPNDADVVALAAFATAESAKRRLIAELCELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD DP GLAF LLSS E V TGH+NGVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVGRDLDPQFGLAFDLLSSQFEKVFTGHENGVITLDLAEGDDVHREQLRISMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYY YRLI +S DYL R++ELFGDP+ADY ALDRHY G P GW+ +VS Sbjct 181 LGHFRHEIGHYYQYRLIGTSQDYLDRYHELFGDPEADYQAALDRHYSEGAPAGWEQDYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAA G APA+AT+DR LGPS F+T+ID WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPATATYDRRVLGPSGFDTLIDLWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 SW+LN VNRSMG +D+YPFVLP VLEKMRFIHTV+DE+ Sbjct 301 SWALNQVNRSMGKEDVYPFVLPPPVLEKMRFIHTVIDEI 339 >gi|120403616|ref|YP_953445.1| hypothetical protein Mvan_2631 [Mycobacterium vanbaalenii PYR-1] gi|119956434|gb|ABM13439.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=363 Score = 496 bits (1276), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 245/339 (73%), Positives = 275/339 (82%), Gaps = 11/339 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA-----------DDADVQLCA 49 MRDF CPNCGQRL+FENS CL+CGSALGFSL MALLVIA D++ QLCA Sbjct 1 MRDFTCPNCGQRLSFENSVCLNCGSALGFSLDDMALLVIAPADESEHAGAVDESHYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 NLHLA+CNWLV + LC SC LT RP+D +T LA FA AE AKRRL+AEL+ELKL Sbjct 61 NLHLAECNWLVQKGPIAKLCVSCALTRTRPNDADTVALAAFATAEKAKRRLLAELYELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD DP +GLAF LLSS + V TGH +GVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVGRDHDPQYGLAFDLLSSQFDKVFTGHADGVITLDLAEGDDVHREQLRISMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYY YRLI +S DYL R++ELFGDP+ADY ALDRHY G P GW+D +VS Sbjct 181 LGHFRHEIGHYYQYRLIGTSQDYLQRYHELFGDPEADYQAALDRHYSEGAPAGWEDDYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAA G APA ATF+R LGPS+F+T+I+ WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPAGATFERKVLGPSSFDTMIEMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 SW+LNMVNRSMG DDLYPFVLP +VLEKMRFIHTV+DE+ Sbjct 301 SWALNMVNRSMGKDDLYPFVLPPSVLEKMRFIHTVIDEI 339 >gi|126434947|ref|YP_001070638.1| hypothetical protein Mjls_2362 [Mycobacterium sp. JLS] gi|126234747|gb|ABN98147.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=358 Score = 482 bits (1241), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 248/342 (73%), Positives = 275/342 (81%), Gaps = 11/342 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDAD-----------VQLCA 49 MRDF+CPNCGQRLAFENS CL+CGSALGFSL MALLVIA + QLCA Sbjct 1 MRDFNCPNCGQRLAFENSLCLNCGSALGFSLDDMALLVIAPPKESDHAGAVSARHYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 N+HLA+CNWLV + + LC +C LT RP+D + LA FA AE AKRRLIAELHELKL Sbjct 61 NMHLAECNWLVETGPVALLCEACALTRTRPNDADAKALAAFAVAERAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD+DPD+GLAF LLSS +E V TGH NGVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVGRDEDPDYGLAFDLLSSENEKVFTGHANGVITLDLAEGDDVHREQLRISMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLI S+ YL FNELFGDPD DY +ALDRHY G P GW++++VS Sbjct 181 LGHFRHEIGHYYFYRLIGPSATYLEGFNELFGDPDLDYQEALDRHYSEGAPAGWEENYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAA G APA ATF+R LGPS F+TII+ WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPAGATFERRVLGPSGFDTIIEMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPD 331 SW+LNMVNRSMG DDLYPFVLP VL+KMRFIH V+DEV D Sbjct 301 SWALNMVNRSMGKDDLYPFVLPPPVLDKMRFIHHVIDEVTAD 342 >gi|108799290|ref|YP_639487.1| hypothetical protein Mmcs_2323 [Mycobacterium sp. MCS] gi|119868406|ref|YP_938358.1| hypothetical protein Mkms_2370 [Mycobacterium sp. KMS] gi|108769709|gb|ABG08431.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694495|gb|ABL91568.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=358 Score = 481 bits (1239), Expect = 6e-134, Method: Compositional matrix adjust. Identities = 248/342 (73%), Positives = 274/342 (81%), Gaps = 11/342 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDAD-----------VQLCA 49 MRDF+CPNCGQRLAFENS CL+CGSALGFSL MALLVIA + QLCA Sbjct 1 MRDFNCPNCGQRLAFENSLCLNCGSALGFSLDDMALLVIAPPKESDHAGAVSARHYQLCA 60 Query 50 NLHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKL 109 N+HLA+CNWLV + + LC +C LT RP+D + LA FA AE AKRRLIAELHELKL Sbjct 61 NMHLAECNWLVETGPVALLCEACALTRTRPNDADAKALAAFAVAERAKRRLIAELHELKL 120 Query 110 PIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTL 169 PIVGRD+DPD+GLAF LLSS +E V TGH NGVITLDLAEGDDVHREQLR+ MDEPYRTL Sbjct 121 PIVGRDEDPDYGLAFDLLSSENEKVFTGHANGVITLDLAEGDDVHREQLRISMDEPYRTL 180 Query 170 LGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVS 229 LGHFRHEIGHYYFYRLI S YL FNELFGDPD DY +ALDRHY G P GW++++VS Sbjct 181 LGHFRHEIGHYYFYRLIGPSPTYLEGFNELFGDPDLDYQEALDRHYSEGAPAGWEENYVS 240 Query 230 SYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPL 289 SYATMH +EDWAETFAHYLHIRD LDTAA G APA ATF+R LGPS F+TII+ WLPL Sbjct 241 SYATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPAGATFERRVLGPSGFDTIIEMWLPL 300 Query 290 SWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPD 331 SW+LNMVNRSMG DDLYPFVLP VL+KMRFIH V+DEV D Sbjct 301 SWALNMVNRSMGKDDLYPFVLPPPVLDKMRFIHHVIDEVTAD 342 >gi|169629940|ref|YP_001703589.1| hypothetical protein MAB_2856c [Mycobacterium abscessus ATCC 19977] gi|169241907|emb|CAM62935.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=341 Score = 480 bits (1236), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 237/333 (72%), Positives = 262/333 (79%), Gaps = 8/333 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLV--------IADDADVQLCANLH 52 MRDF CP CGQ LAFENS CLSCGS LGFSL + ALLV D D QLCANLH Sbjct 1 MRDFICPQCGQHLAFENSVCLSCGSHLGFSLDQKALLVLAADAAPGFVDADDHQLCANLH 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 +A+CNWLV G LC+SC LT RP+D +TA L FA AE AKRRLIAEL EL+LP+ Sbjct 61 VAECNWLVSGASAGTLCASCALTRTRPNDADTAALPAFAEAEKAKRRLIAELAELRLPVT 120 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 GRD DP+ GLAF LLSS E V TGH NGVITLDLAEGDDVHREQLR+ MDEPYRTLLGH Sbjct 121 GRDTDPEFGLAFDLLSSEQEQVMTGHHNGVITLDLAEGDDVHREQLRISMDEPYRTLLGH 180 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHEIGHY++YRL+ S++YL RF+ LFGD DADY ALDRHY+ G PEGW++S+VSSYA Sbjct 181 FRHEIGHYFYYRLVGGSAEYLERFHALFGDADADYQAALDRHYQQGAPEGWEESYVSSYA 240 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWS 292 TMH +EDWAETFAHYLHIRD LDTAA LAPA TFDR LGPS F+TII+ WLPL+WS Sbjct 241 TMHPAEDWAETFAHYLHIRDTLDTAASFALAPAGGTFDRRVLGPSGFDTIIEMWLPLAWS 300 Query 293 LNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 LNMVNRSMGH DLYPFVLP VLEKMR IH +V Sbjct 301 LNMVNRSMGHLDLYPFVLPGPVLEKMRLIHEIV 333 >gi|312198313|ref|YP_004018374.1| hypothetical protein FraEuI1c_4511 [Frankia sp. EuI1c] gi|311229649|gb|ADP82504.1| protein of unknown function UCP012641 [Frankia sp. EuI1c] Length=341 Score = 422 bits (1084), Expect = 6e-116, Method: Compositional matrix adjust. Identities = 212/335 (64%), Positives = 240/335 (72%), Gaps = 7/335 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDA------DVQLCANLHLA 54 MRDF CP CGQRL FENS CL CGS LGF + V+ D+ CAN+ +A Sbjct 1 MRDFACPKCGQRLTFENSRCLGCGSGLGFDPEARSFAVLTDEGVRVDGPAAARCANVDVA 60 Query 55 QCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGR 114 CNWL P+D+ GLC+SC LT RP+D + L FA AE AKRRL+ EL EL LP+ GR Sbjct 61 ACNWLAPADRRSGLCASCALTRTRPADADLHALPAFAEAEAAKRRLVLELAELGLPMRGR 120 Query 115 DQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFR 174 D DP GL F LLSS HE V TGH +GV+TLDLAEGDDVHREQLRV M EPYRTLLGHFR Sbjct 121 DVDPATGLCFDLLSSGHERVITGHADGVVTLDLAEGDDVHREQLRVSMAEPYRTLLGHFR 180 Query 175 HEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATM 234 HE+GHYYF L A + +RF ELFGDPDADY ALDRHY+ GPP GWQ+++VS+YATM Sbjct 181 HEVGHYYFTVLAAGGAGR-ARFEELFGDPDADYQAALDRHYQQGPPPGWQETYVSAYATM 239 Query 235 HASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLN 294 H +EDWAETFAHYLHIRD LDTAA GLAPA AT G F II+ WLPL+WSLN Sbjct 240 HPAEDWAETFAHYLHIRDTLDTAAAFGLAPAGATLATALAGEVGFRRIIELWLPLAWSLN 299 Query 295 MVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVA 329 MVNRSMGH DLYPFVLP A L+KM +H +V E Sbjct 300 MVNRSMGHPDLYPFVLPPAALDKMGLVHQLVAEAG 334 >gi|296394005|ref|YP_003658889.1| hypothetical protein Srot_1596 [Segniliparus rotundus DSM 44985] gi|296181152|gb|ADG98058.1| protein of unknown function UCP012641 [Segniliparus rotundus DSM 44985] Length=348 Score = 412 bits (1060), Expect = 3e-113, Method: Compositional matrix adjust. Identities = 213/335 (64%), Positives = 237/335 (71%), Gaps = 11/335 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA----------DDADVQLCAN 50 MRDF C NCGQRL+FENS CL C S LGF R L+V+A D D +LC N Sbjct 1 MRDFACANCGQRLSFENSLCLGCDSQLGFHFARRDLVVLAHGEEHDGVIVDARDYKLCDN 60 Query 51 LHLAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLP 110 LHLA+CNWLV D GLC SC LT RP+D + L EFA+AE AKRRLI EL L LP Sbjct 61 LHLARCNWLVSVDDEDGLCESCALTRTRPNDNDIEALEEFAQAEDAKRRLIFELSVLGLP 120 Query 111 IVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLL 170 IV R+ PD GLAF LLSS E + TGH +GVITLDLAEGDDVHREQ+RVE+ EPYRTLL Sbjct 121 IVSREAQPDSGLAFDLLSSREEKIFTGHADGVITLDLAEGDDVHREQMRVELAEPYRTLL 180 Query 171 GHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSS 230 GHFRHEIGHYYF L+ + F LFGDPD DY ALDRHY G P GW+D FVSS Sbjct 181 GHFRHEIGHYYFTVLVGQGENR-PEFEALFGDPDLDYQAALDRHYTEGAPAGWEDEFVSS 239 Query 231 YATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLS 290 YATMH +EDWAETFAHYLHIRD LDTAA G APA T D+ G FN I+D+WLPL Sbjct 240 YATMHPAEDWAETFAHYLHIRDTLDTAAAFGFAPAGFTMDKSRPGRVGFNAILDEWLPLV 299 Query 291 WSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 WSLNM+NRSMGH DLYPFVL VL+K+ F H +V Sbjct 300 WSLNMMNRSMGHPDLYPFVLAPKVLDKLAFAHQLV 334 >gi|343924127|ref|ZP_08763690.1| hypothetical protein GOALK_002_00810 [Gordonia alkanivorans NBRC 16433] gi|343765932|dbj|GAA10616.1| hypothetical protein GOALK_002_00810 [Gordonia alkanivorans NBRC 16433] Length=334 Score = 407 bits (1047), Expect = 9e-112, Method: Compositional matrix adjust. Identities = 202/336 (61%), Positives = 241/336 (72%), Gaps = 9/336 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQL-------CANLHL 53 MRDF C NCGQRL+FENS CL+C S LGF L ++ V+ D ++ C N + Sbjct 1 MRDFICLNCGQRLSFENSLCLNCQSPLGFWLESRSIQVLDDKGRAEVDGVLLERCVNTKV 60 Query 54 AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113 AQCNWLV LC SC LT RP D + L F +AE AKRRL+ EL EL LPI Sbjct 61 AQCNWLVKWTGNPELCQSCELTRTRPGDDDPEALVVFGQAETAKRRLVLELTELGLPIEN 120 Query 114 RDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHF 173 RD++P GLAF LLSSA NV TGH +GVITLDLAEGDDVHREQ+RVE+DEPYRT+LGHF Sbjct 121 RDENPTTGLAFDLLSSAQRNVITGHASGVITLDLAEGDDVHREQMRVELDEPYRTVLGHF 180 Query 174 RHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYAT 233 RHEIGHYY +L+ + + +F ELFG+PD DY ALDRHY+ G PEGW+ ++VSSYAT Sbjct 181 RHEIGHYY--QLVLITDNRRPQFEELFGNPDDDYQAALDRHYKEGAPEGWRKNYVSSYAT 238 Query 234 MHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSL 293 MH +ED+AETFAHYLHIRD LDTAA +AP+ T D G F+ IID+WLPL+W+L Sbjct 239 MHPAEDFAETFAHYLHIRDTLDTAAAFAMAPSGTTLDSVPPGDVGFDRIIDEWLPLTWAL 298 Query 294 NMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVA 329 N +NRSMGH DLYPFVLPA VLEK+RF+H +V V Sbjct 299 NQINRSMGHPDLYPFVLPAPVLEKIRFVHNLVAPVG 334 >gi|258653472|ref|YP_003202628.1| hypothetical protein Namu_3310 [Nakamurella multipartita DSM 44233] gi|258556697|gb|ACV79639.1| conserved hypothetical protein [Nakamurella multipartita DSM 44233] Length=341 Score = 407 bits (1045), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 212/347 (62%), Positives = 248/347 (72%), Gaps = 12/347 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADV------QLCANLHLA 54 MRDF CP+CGQ+LAFENS CL+CG+A+GF L V+ + ++CANLH+A Sbjct 1 MRDFVCPHCGQQLAFENSVCLNCGNAIGFDLAARDFAVLGEGGTTVLEPARKMCANLHVA 60 Query 55 QCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGR 114 CNWLVP D LC SC LT RP+D + A L FA AE AKRRL+ EL EL LPI R Sbjct 61 ACNWLVPVDG-EPLCRSCSLTRTRPADGDPA-LPAFAEAEAAKRRLVVELVELSLPINDR 118 Query 115 DQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFR 174 DP+ GL F LLSS HENV TGH +GVITLDLAEGDDVHREQLR+ MDEPYRTLLGHFR Sbjct 119 TADPEKGLTFDLLSSEHENVITGHDSGVITLDLAEGDDVHREQLRISMDEPYRTLLGHFR 178 Query 175 HEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATM 234 HE GHY+F+ ++A + F +LFGDPD DY +ALDRHY G PEGW+D++VSSYATM Sbjct 179 HETGHYFFF-VLAETGPARQEFEKLFGDPDLDYQEALDRHYSQGAPEGWEDNYVSSYATM 237 Query 235 HASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLN 294 H +EDWAETFAHYLHIRD +DTAA G APA A +P G F+ +I WLPL+WSLN Sbjct 238 HPAEDWAETFAHYLHIRDTIDTAAAFGFAPAGAAATQPLAGDVGFDRMIALWLPLAWSLN 297 Query 295 MVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV 341 M+NRSMGH DLYPFVLP VL+KMR +H + VA PA TV Sbjct 298 MLNRSMGHKDLYPFVLPPTVLDKMRLVHKL---VAASNTPAEVNATV 341 >gi|296394985|ref|YP_003659869.1| hypothetical protein Srot_2603 [Segniliparus rotundus DSM 44985] gi|296182132|gb|ADG99038.1| protein of unknown function UCP012641 [Segniliparus rotundus DSM 44985] Length=331 Score = 406 bits (1044), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 212/325 (66%), Positives = 245/325 (76%), Gaps = 2/325 (0%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV 60 MRDF C CGQRL FENS CL+C S +G+SL +LVI D + Q CANL+LA CNWLV Sbjct 1 MRDFACHTCGQRLVFENSVCLNCDSPVGYSLADHDVLVI-DPSRFQPCANLNLAACNWLV 59 Query 61 PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH 120 P+ GLC SC LT RP+DT+T LA FA AE AKRRL+AELH+L LP+VG+ +DP Sbjct 60 PAGYEAGLCESCALTRTRPADTDTEFLALFAEAEAAKRRLVAELHDLGLPLVGKAEDPQG 119 Query 121 GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY 180 GLAF LLSSA ENV GH +GVITLDLAEGDD HREQ+R E+ EPYRTLLGHFRHE GHY Sbjct 120 GLAFDLLSSATENVVIGHADGVITLDLAEGDDAHREQMRAELAEPYRTLLGHFRHESGHY 179 Query 181 YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW 240 Y Y ++ + +F +LFGDPDADY ALDRHY G P GW+D FVSSYATMHA+EDW Sbjct 180 Y-YTVLVTDDTVKQQFMQLFGDPDADYQAALDRHYSEGAPAGWEDEFVSSYATMHAAEDW 238 Query 241 AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM 300 AETFAHYLHIRD LDTAA G APA + D+P G F+ +I+ WLPL+WSLNMVNRSM Sbjct 239 AETFAHYLHIRDTLDTAAAFGFAPAGVSIDKPKPGRVGFDQLIEHWLPLAWSLNMVNRSM 298 Query 301 GHDDLYPFVLPAAVLEKMRFIHTVV 325 GH DLYPFVL VL+KM F+H +V Sbjct 299 GHPDLYPFVLAPKVLDKMAFVHELV 323 >gi|111018045|ref|YP_701017.1| hypothetical protein RHA1_ro01032 [Rhodococcus jostii RHA1] gi|110817575|gb|ABG92859.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=353 Score = 402 bits (1033), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 214/342 (63%), Positives = 245/342 (72%), Gaps = 8/342 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVI--ADDADVQ-----LCANLHL 53 MR F C CGQRL+FENS CL C SALGF L +++V+ D ADV C N Sbjct 1 MRSFMCRKCGQRLSFENSLCLKCDSALGFHLPSRSIVVLDGGDRADVDGETWVRCGNAGT 60 Query 54 AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113 A+CNWLV +D + LC+SC LT RP+D + G+A FA AE KRR++ EL EL LPIV Sbjct 61 AKCNWLVRNDDVQSLCTSCRLTRTRPADGDDEGMAAFATAETNKRRVVLELDELGLPIVP 120 Query 114 RDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHF 173 + +DP GLAF LLSSA V TGH GVITLDLAEGDDVHREQLRVEMDEPYRTL+GHF Sbjct 121 KFEDPGTGLAFDLLSSAKTRVVTGHAGGVITLDLAEGDDVHREQLRVEMDEPYRTLVGHF 180 Query 174 RHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYAT 233 RHEIGHYY LI ++ +RF +LFGDPD DY AL RHYR G P+GW +VSSYAT Sbjct 181 RHEIGHYYQVMLIRGDAER-ARFEDLFGDPDVDYQAALKRHYREGAPKGWGRLYVSSYAT 239 Query 234 MHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSL 293 MH +EDWAETFAHYLHIRDALDTAA +APA AT G F+ IID WLPLSW+L Sbjct 240 MHPAEDWAETFAHYLHIRDALDTAAAFAMAPAGATTSSELSGDVGFDQIIDWWLPLSWAL 299 Query 294 NMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPA 335 N +NRSMGH DLYPFVLPAAVLEKMRFIH+++ EPA Sbjct 300 NQLNRSMGHHDLYPFVLPAAVLEKMRFIHSLIQPAPVWDEPA 341 >gi|333918501|ref|YP_004492082.1| hypothetical protein AS9A_0830 [Amycolicicoccus subflavus DQS3-9A1] gi|333480722|gb|AEF39282.1| hypothetical protein AS9A_0830 [Amycolicicoccus subflavus DQS3-9A1] Length=335 Score = 399 bits (1024), Expect = 5e-109, Method: Compositional matrix adjust. Identities = 201/332 (61%), Positives = 239/332 (72%), Gaps = 9/332 (2%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIAD-------DADVQLCANLHL 53 MRDF C CGQRL FEN+ CL C S LG L +L+ + + DA+ CAN L Sbjct 1 MRDFLCRTCGQRLTFENTQCLRCRSYLGLHLPSRSLVTLEESGATRIKDAEWVRCANRKL 60 Query 54 AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113 A CNWLVP++ LC+SC LT RP++ + EFA AE AKRR+I EL EL LP+ Sbjct 61 AHCNWLVPANSASPLCASCALTRTRPNEEDPL-FREFANAETAKRRVILELDELGLPLAD 119 Query 114 RDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHF 173 RD+DP GL F LLSS E V TGH +G+ITLDLAEGDD+HRE+LRVEMDEPYRTL+GHF Sbjct 120 RDEDPQRGLGFDLLSSVGEKVITGHASGLITLDLAEGDDLHRERLRVEMDEPYRTLVGHF 179 Query 174 RHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYAT 233 RHEIGHYY LI +++D + + LFGD +ADY AL+RHYR GPP+GW ++VSSYAT Sbjct 180 RHEIGHYYQMVLI-NTTDRHATYEALFGDINADYQAALNRHYRDGPPDGWSANYVSSYAT 238 Query 234 MHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSL 293 MH +EDWAETFAHYLHIRDALDTAA G AP+ A+ G + FN IID WLPL+W+L Sbjct 239 MHPAEDWAETFAHYLHIRDALDTAAAFGFAPSGASLTNDLSGDAGFNRIIDWWLPLAWAL 298 Query 294 NMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 N VNRSMGH DLYPFVL VL+KMRFIH +V Sbjct 299 NQVNRSMGHSDLYPFVLRGPVLKKMRFIHQLV 330 >gi|270261841|ref|ZP_06190113.1| putative cytoplasmic protein [Serratia odorifera 4Rx13] gi|270043717|gb|EFA16809.1| putative cytoplasmic protein [Serratia odorifera 4Rx13] Length=342 Score = 395 bits (1016), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 209/333 (63%), Positives = 241/333 (73%), Gaps = 12/333 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADV--------QLCANLH 52 MR+F CPNCGQ+L+FENS CLSC S+LGF L L+VI A V LCAN+H Sbjct 1 MRNFSCPNCGQQLSFENSLCLSCSSSLGFDLPGRRLVVIPALAPVGDGKPEQGHLCANMH 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 +AQCNWLV Q G LC+SC LT RP+D + L FA AE AKRRLI EL EL LPIV Sbjct 61 IAQCNWLVA--QEGDLCASCHLTQTRPADDDAEALPLFAEAETAKRRLILELTELGLPIV 118 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 ++ DP++GL F LLSS V TGH NGVITLDL EGDDVHREQ R+ M EPYRTLLGH Sbjct 119 SKNDDPNNGLIFELLSSERRQVLTGHANGVITLDLEEGDDVHREQRRISMGEPYRTLLGH 178 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHE+GHYY+ +LI + F +LFGDPDADY QALDRHYR G PEGW + +VS+YA Sbjct 179 FRHEVGHYYYDQLIIQPEQRQA-FVDLFGDPDADYQQALDRHYRQGAPEGWHECYVSAYA 237 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWS 292 TMHA+EDWAETFAHYLHIRD LDTAA G A A F+ P F+ +I +WLP+SW+ Sbjct 238 TMHAAEDWAETFAHYLHIRDTLDTAAAYGFAAPDAAFNHSDETPD-FDRLIGQWLPVSWA 296 Query 293 LNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 LN +NRSMGH DLYPFVLP VLEKMRFIH + Sbjct 297 LNQLNRSMGHADLYPFVLPTPVLEKMRFIHQTI 329 >gi|333927237|ref|YP_004500816.1| hypothetical protein SerAS12_2382 [Serratia sp. AS12] gi|333932191|ref|YP_004505769.1| hypothetical protein SerAS9_2382 [Serratia sp. AS9] gi|333473798|gb|AEF45508.1| protein of unknown function UCP012641 [Serratia sp. AS9] gi|333491297|gb|AEF50459.1| protein of unknown function UCP012641 [Serratia sp. AS12] gi|333961393|gb|AEG28166.1| protein of unknown function UCP012641 [Serratia sp. AS13] Length=342 Score = 395 bits (1015), Expect = 5e-108, Method: Compositional matrix adjust. Identities = 209/336 (63%), Positives = 242/336 (73%), Gaps = 12/336 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA--------DDADVQLCANLH 52 MR+F CPNCGQ+L+FENS CLSC S+LGF L L+ IA D LCAN+H Sbjct 1 MRNFSCPNCGQQLSFENSLCLSCSSSLGFDLPGRRLVAIAAPGPAGSGDPEQGHLCANMH 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 +AQCNWLV Q G LC+SC LT RP+D +T L FA AE AKRRLI EL EL LPIV Sbjct 61 IAQCNWLVA--QEGDLCASCHLTQTRPADDDTEALPLFAEAETAKRRLILELTELGLPIV 118 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 ++ DP++GL F LLSS V TGH NGVITLDL EGDDVHREQ R+ M E YRTLLGH Sbjct 119 SKNDDPNNGLIFELLSSERRQVLTGHANGVITLDLEEGDDVHREQRRISMGESYRTLLGH 178 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHE+GHYY Y L+ + F +LFGDPDADY QALDRHY+ G PEGW + +VS+YA Sbjct 179 FRHEVGHYY-YSLLIIQPERRQAFIDLFGDPDADYQQALDRHYQQGAPEGWHECYVSAYA 237 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWS 292 TMHA+EDWAETFAHYLHIRD LDTAA G A A F+ A P F+ +I +WLP+SW+ Sbjct 238 TMHAAEDWAETFAHYLHIRDTLDTAAAYGFAAPDAAFNHSAETPD-FDRLIAQWLPVSWA 296 Query 293 LNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEV 328 LN +NRSMGH DLYPFVLP VLEKMRFIH + +V Sbjct 297 LNQLNRSMGHADLYPFVLPTPVLEKMRFIHQTIADV 332 >gi|262202991|ref|YP_003274199.1| hypothetical protein Gbro_3100 [Gordonia bronchialis DSM 43247] gi|262086338|gb|ACY22306.1| protein of unknown function UCP012641 [Gordonia bronchialis DSM 43247] Length=336 Score = 386 bits (991), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 203/332 (62%), Positives = 236/332 (72%), Gaps = 10/332 (3%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVI-------ADDADVQLCANLHL 53 MRDF C CGQRL+FENS CL C S LGF L ++ V+ D V+ CAN + Sbjct 4 MRDFLCRKCGQRLSFENSLCLHCKSPLGFWLPTRSIYVLDEKERTEVDGVLVERCANNKV 63 Query 54 AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113 AQCNWLV LC+SC LT RP+D +T L + +AE AKRRLI EL EL LPI G Sbjct 64 AQCNWLVEWTGKSELCASCRLTRTRPADDDTDALPAYGQAETAKRRLILELDELGLPIRG 123 Query 114 RDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHF 173 RD+DPD GLAF LLSSA E V TGH NGVITLDLAEGDDVHREQ+RVE+ E YRT+LGHF Sbjct 124 RDEDPDTGLAFDLLSSAREPVVTGHANGVITLDLAEGDDVHREQMRVELAEQYRTVLGHF 183 Query 174 RHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYAT 233 RHEIGHYY + S+ + F LFG+PD DY ALDRHY G P GW+ +FVSSYAT Sbjct 184 RHEIGHYYQLVFLDSAR---AGFEALFGNPDEDYQAALDRHYSQGAPAGWEQNFVSSYAT 240 Query 234 MHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSL 293 MH +ED+AETFAHYLHIRD LDTAA +APA AT D G F I++ WLPL+W+L Sbjct 241 MHPAEDFAETFAHYLHIRDTLDTAAAFAMAPAGATLDGILPGDVGFEQIVEWWLPLTWAL 300 Query 294 NMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 N +NRSMGH DLYPFVLPA VLEK++F+H +V Sbjct 301 NQINRSMGHPDLYPFVLPAKVLEKIKFVHNLV 332 >gi|317509231|ref|ZP_07966852.1| hypothetical protein HMPREF9336_03224 [Segniliparus rugosus ATCC BAA-974] gi|316252441|gb|EFV11890.1| hypothetical protein HMPREF9336_03224 [Segniliparus rugosus ATCC BAA-974] Length=324 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 186/300 (62%), Positives = 219/300 (73%), Gaps = 2/300 (0%) Query 20 CLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERP 79 CLSC SA+G+SL +LV+ D Q CANL++A CNWLVP + G LC SC LT RP Sbjct 2 CLSCQSAVGYSLSDGDILVL-DPERHQACANLNVAACNWLVPVGEAGALCESCALTRTRP 60 Query 80 SDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQ 139 +D + L FA AE AKRRL+A+LHEL LP+ G+ +DP GLAF LLSSA +NV GH Sbjct 61 NDDDAEFLPLFAEAETAKRRLVAQLHELGLPVAGKAEDPSGGLAFDLLSSAAQNVVIGHA 120 Query 140 NGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNEL 199 +GVITLDLAEGDD HREQ+R ++ EPYRTLLGHFRHE GHYY Y ++ + + F EL Sbjct 121 DGVITLDLAEGDDSHREQMRAQLAEPYRTLLGHFRHESGHYY-YTVLVQDEEAKAAFVEL 179 Query 200 FGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAW 259 FGDPDADY ALDRHY G P GW+D FVSSYATMHA+EDWAETFAHYLHIRD LDTAA Sbjct 180 FGDPDADYQAALDRHYSQGAPAGWEDEFVSSYATMHAAEDWAETFAHYLHIRDTLDTAAA 239 Query 260 CGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMR 319 G APA + D+P G F+ +I +W+PL+WSLNMVNRSMGH DLYPFV P + R Sbjct 240 FGFAPAGVSVDKPKPGRVGFDQLIAEWIPLAWSLNMVNRSMGHQDLYPFVPPPESPRQTR 299 >gi|317507309|ref|ZP_07965050.1| hypothetical protein HMPREF9336_01422 [Segniliparus rugosus ATCC BAA-974] gi|316254395|gb|EFV13724.1| hypothetical protein HMPREF9336_01422 [Segniliparus rugosus ATCC BAA-974] Length=403 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 175/270 (65%), Positives = 197/270 (73%), Gaps = 1/270 (0%) Query 56 CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRD 115 +V D GLC SC LT RPSD + L FA AE AKRRLI EL L LPIVGR Sbjct 118 VQLVVAVDDEDGLCESCALTRTRPSDDDLEALEAFAEAEDAKRRLILELSVLGLPIVGRK 177 Query 116 QDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRH 175 DP+ GLAF LLSS + + TGH NGVITLDLAEGDDVHREQ+RVE+ EPYRTLLGHFRH Sbjct 178 ADPEGGLAFDLLSSRSQQILTGHANGVITLDLAEGDDVHREQMRVELAEPYRTLLGHFRH 237 Query 176 EIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMH 235 EIGHYYF L+ + ++ F E FGDPD DY +ALDRHY G P GW+D FVSSYATMH Sbjct 238 EIGHYYFPVLVGTG-EHRREFEEFFGDPDLDYQEALDRHYSEGAPAGWEDEFVSSYATMH 296 Query 236 ASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNM 295 +EDWAETFAHYLHIRD LDTAA G APA T D+ G FN I+D+WLPL WSLNM Sbjct 297 PAEDWAETFAHYLHIRDTLDTAASFGFAPAGVTLDKARPGRIGFNAIVDEWLPLVWSLNM 356 Query 296 VNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 +NRSMGH DLYPFVL VL+K+ F+H +V Sbjct 357 INRSMGHPDLYPFVLAPKVLDKLAFVHQLV 386 >gi|311744124|ref|ZP_07717930.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311313254|gb|EFQ83165.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=325 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 167/336 (50%), Positives = 217/336 (65%), Gaps = 25/336 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVI--------ADDADVQLCANLH 52 MR F C C L FENS C+SCG+ LGFS R ++ + D +C NL+ Sbjct 1 MRAFTCGICDSPLYFENSVCVSCGTNLGFSRDRREIVPVDEGGRWIDPDGLVWHVCDNLN 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 L+ C WL P + GG CS+C LT RPSD + GL++F AE AKR L+ EL L V Sbjct 61 LSGCTWLAPLE--GGACSACDLTRTRPSDDDLTGLSQFPVAEAAKRHLLVELDTQGLSYV 118 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 RD DP+ GL F +LSS ENV GH++GVIT+DLAEGDD HR ++RVE+ EPYRT+LGH Sbjct 119 SRDDDPEFGLCFDMLSSVEENVVIGHEDGVITIDLAEGDDAHRVKVRVELAEPYRTMLGH 178 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 RHE+GHY + D ++ ELFG+ +A Y +A++RHY GPPE W+DS++S+YA Sbjct 179 LRHEVGHY--MEFLHVRGDRIAAARELFGNEEASYPEAIERHYEQGPPENWEDSYISTYA 236 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIID----KWLP 288 TMH ED+AETFAH LHI D +DTAA GL A+ PSAF++ D W+P Sbjct 237 TMHPFEDFAETFAHVLHITDTVDTAASYGLL---------AIDPSAFSSFRDLVTGVWVP 287 Query 289 LSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTV 324 LS +LN +NRSMG DLYPFV+P VL+K+ F+ ++ Sbjct 288 LSTALNQINRSMGALDLYPFVIPPPVLDKLEFVASL 323 >gi|111220637|ref|YP_711431.1| hypothetical protein FRAAL1176 [Frankia alni ACN14a] gi|111148169|emb|CAJ59838.1| conserved hypothetical protein [Frankia alni ACN14a] Length=439 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 160/295 (55%), Positives = 191/295 (65%), Gaps = 23/295 (7%) Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 LA CNWL+P GGLC C LT RP+DT+ G +F RAE AKRRL+A+L EL LP+V Sbjct 128 LAGCNWLIPVPA-GGLCVCCRLTRTRPADTDPVGKEQFERAEAAKRRLVAQLLELGLPVV 186 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 DP GLAF LLSS + V TGH +GVITLDLAE DD HRE +R ++ EPYRTLLGH Sbjct 187 SHLDDPATGLAFDLLSSTRQKVMTGHSDGVITLDLAESDDAHRETVRTQLGEPYRTLLGH 246 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHE GHYY+ L+ + + +RF ELFGD DYS ALDRHY GPP W+D+ VS+YA Sbjct 247 FRHETGHYYWSSLVDADPERAARFRELFGDAGLDYSAALDRHYADGPPPNWRDTHVSAYA 306 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNT----------- 281 TMH EDWAETFAHYLHIRD L TAA GL A D + P + Sbjct 307 TMHPWEDWAETFAHYLHIRDTLRTAAEFGLRVAGPDLDAFGVAPRSLAAEPADLPPLDVD 366 Query 282 -----------IIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 I+ +WLPL+++LN +NRSMG DDLYPFVL AV K+ F+H V+ Sbjct 367 GLDRSSGELAEIVAQWLPLTYALNAINRSMGRDDLYPFVLTPAVQAKLSFVHDVI 421 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 19/43 (45%), Positives = 26/43 (61%), Gaps = 0/43 (0%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDA 43 M+ C CGQ + FEN+ACL CG+ LGF R +L + D+ Sbjct 1 MKVNGCARCGQLVFFENTACLRCGAPLGFEPERGRVLTLVPDS 43 >gi|323356658|ref|YP_004223054.1| hypothetical protein MTES_0210 [Microbacterium testaceum StLB037] gi|323273029|dbj|BAJ73174.1| uncharacterized protein conserved in bacteria [Microbacterium testaceum StLB037] Length=341 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 160/337 (48%), Positives = 217/337 (65%), Gaps = 25/337 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALL--------VIADDADVQLCANLH 52 M+ F C C L FENS C+SC + LGFS ++ V A++ +C NL+ Sbjct 1 MKSFRCRVCRNALTFENSVCVSCHTPLGFSRDEAEIVPVDENGRYVDAEERTWHVCRNLN 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 L+ C WL P + GG CS+C LT RP+D + GL+++ AE AKR L+ +L L P+V Sbjct 61 LSGCTWLAPVE--GGQCSACDLTRVRPNDADAKGLSQYPVAERAKRWLLVDLDRLGFPVV 118 Query 113 GRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 G+ +DP+ GL F LLSS E+VT GH +GVIT+DLAE DD +R +++ ++ EPYRT+LGH Sbjct 119 GKAEDPERGLCFDLLSSVAEDVTIGHADGVITIDLAESDDAYRVRVQEQLGEPYRTMLGH 178 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHE GHY+ + L+ +D L+ LFGD ADY +DRHY GPP W + F+S+YA Sbjct 179 FRHESGHYFEWILV-EGTDRLAEARALFGDETADYQAEIDRHYSEGPPADWPERFISTYA 237 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGL-----APASATFDRPALGPSAFNTIIDKWL 287 TMH ED+AET+AHYLHI D ++TA GL APASA F + + W+ Sbjct 238 TMHPYEDFAETWAHYLHITDTVETATVYGLSRVDDAPASARFR---------EFVTEVWM 288 Query 288 PLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTV 324 PL+ +LNMVNRSMG DDLYPF+LP VL+K+ F+ ++ Sbjct 289 PLANALNMVNRSMGKDDLYPFLLPDPVLDKLDFVASL 325 >gi|170692998|ref|ZP_02884159.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170141996|gb|EDT10163.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length=363 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 165/358 (47%), Positives = 216/358 (61%), Gaps = 24/358 (6%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVI--------------ADDADVQ 46 M+ FHC C QR+ FEN C C + LG+ A+ AD A + Sbjct 1 MKTFHCNRCSQRVFFENVRCERCAALLGYLPQLRAISAFEDAGEARWRSLHPQADGALYK 60 Query 47 LCANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELH 105 C N + CNW++P+D LC +C LT P+ + + R E AKRRL+ L Sbjct 61 QCHNYAVENVCNWMIPADSPDTLCRACQLTRTIPNLSTPDNRLYWYRLEVAKRRLLYTLA 120 Query 106 ELKLPIVGRDQDPDHGLAFRLLSSAHE--NVTTGHQNGVITLDLAEGDDVHREQLRVEMD 163 EL L + R QDP GLAF L + + V TGH NG+ITL++AE DD HRE++R M Sbjct 121 ELGLDVKSRRQDPQQGLAFEFLEDSGDGSRVMTGHDNGLITLNIAEADDAHREKVRTAMG 180 Query 164 EPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGW 223 EPYRTLLGHFRHE GHYYF RLIA++ +L F ELFGD A+Y ALD +YR G P W Sbjct 181 EPYRTLLGHFRHETGHYYFSRLIANNPRWLPAFRELFGDERANYGDALDTYYRVGAPADW 240 Query 224 QDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGPS 277 Q S++S+YATMH EDWAET+AHYL I D LDT+ G+A P T DR + + Sbjct 241 QASYISAYATMHPWEDWAETWAHYLMIVDVLDTSTAYGIALLSDDPREPTLTDRTPVENA 300 Query 278 AFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPA 335 +F+T++ +W PL+++LN +NRS+G D YPF L A V++K+RF+H V+ E A D PA Sbjct 301 SFDTLMKRWFPLTYALNGLNRSLGMPDGYPFALAAPVVDKLRFVHRVIAE-AGDKSPA 357 >gi|326328626|ref|ZP_08194966.1| hypothetical protein NBCG_00064 [Nocardioidaceae bacterium Broad-1] gi|325953587|gb|EGD45587.1| hypothetical protein NBCG_00064 [Nocardioidaceae bacterium Broad-1] Length=333 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 158/341 (47%), Positives = 216/341 (64%), Gaps = 28/341 (8%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQ--------LCANLH 52 M F C CG RL FENSAC+SCG+ L +S ++ ++ + +CAN Sbjct 1 MEAFTCRECGNRLYFENSACVSCGTRLAYSREEREIVPVSPEGRYVDSDGYVWWVCANTL 60 Query 53 LAQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAE-FARAEGAKRRLIAELHELKLPI 111 C WL + GG+C SC LT RP+D + + ++ AE AKR L+ EL L L + Sbjct 61 ETGCTWLARLE--GGICFSCELTRTRPNDAAPEFVQQQYSLAEQAKRHLVVELDTLGLEV 118 Query 112 VGRDQDPDHGLAFRLLSS----AHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYR 167 + +DP GLAF LL+S + +V GH +GVIT+DLAE DD +RE +R +DEPYR Sbjct 119 RTKAEDPVDGLAFDLLASDGIASTADVVIGHDSGVITIDLAESDDAYREHVRATLDEPYR 178 Query 168 TLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSF 227 TLLGHFRHE+GHYY ++L+ + + R E+FGD Y ++L RHY GPP+GW +++ Sbjct 179 TLLGHFRHEVGHYYEWQLV-RGPELMQRCTEVFGDESVSYEESLQRHYSEGPPDGWTENY 237 Query 228 VSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA---PASATFDRPALGPSAFNTIID 284 +S+YATMH ED+AET+AHYLHIRD L +AA GLA PA F + + D Sbjct 238 ISTYATMHPFEDFAETWAHYLHIRDTLGSAAAYGLADPVPADMPFRQ---------VVTD 288 Query 285 KWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 W+PLS +LN++NRSMGHDDLYPFV+P AVL+K+ F+ ++V Sbjct 289 IWVPLSAALNVINRSMGHDDLYPFVIPPAVLDKLDFVASLV 329 >gi|330820541|ref|YP_004349403.1| hypothetical protein bgla_2g14450 [Burkholderia gladioli BSR3] gi|327372536|gb|AEA63891.1| hypothetical protein bgla_2g14450 [Burkholderia gladioli BSR3] Length=382 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 162/359 (46%), Positives = 212/359 (60%), Gaps = 31/359 (8%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGF--SLGRMALLVIADDADVQLCANLHLAQ--- 55 M+ FHC NCGQ + FEN C C + LG+ +G + I DA +LH + Sbjct 1 MKTFHCGNCGQLVFFENVRCERCEAPLGYLPEVGEVGAFEI--DASSGQWRSLHPSVAGQ 58 Query 56 -------------CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIA 102 CNW+VP+D C SC LT P +N + R E AKRRL+ Sbjct 59 LYRPCHNYSVENVCNWMVPADSPASYCESCALTETIPDLSNPDNRPLWYRTEAAKRRLVY 118 Query 103 ELHELKLPIVGRDQDPDHGLAFRLLSSAH-ENVTTGHQNGVITLDLAEGDDVHREQLRVE 161 L L LP+ R P+ G++F ++ E V TGH NG+ITL+LAE DD RE++R Sbjct 119 TLTMLGLPVESRLLAPERGMSFAFKAATESEPVMTGHANGLITLNLAEADDAERERVRAA 178 Query 162 MDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPE 221 M EPYRTL+GHFRHEIGHYYF RLI S+ + F E FGD ADY ALD HY+ G P Sbjct 179 MHEPYRTLVGHFRHEIGHYYFDRLIVGSA-WQEAFRERFGDERADYQAALDAHYQNGAPA 237 Query 222 GWQDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA--PASATF----DRPALG 275 GW+DS++S YA+MH EDWAET+AHYLH+ D LDTA CGL P + D+ ++ Sbjct 238 GWEDSYISEYASMHPWEDWAETWAHYLHMVDTLDTANACGLVLDPDDESLPHLDDQTSVD 297 Query 276 PSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD---EVAPD 331 ++F ++ +W PL+++LN +NRSMG D YPF L AV+ K+RF+H V+ E APD Sbjct 298 EASFGNLMRRWFPLTYALNSLNRSMGVADAYPFALSPAVVAKLRFVHRVISATREAAPD 356 >gi|295700100|ref|YP_003607993.1| hypothetical protein BC1002_4506 [Burkholderia sp. CCGE1002] gi|295439313|gb|ADG18482.1| protein of unknown function UCP012641 [Burkholderia sp. CCGE1002] Length=401 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 157/348 (46%), Positives = 211/348 (61%), Gaps = 23/348 (6%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGF--SLGRMALLVIADD------------ADVQ 46 M+ FHC C Q + +EN C C S LG+ LG ++ A D A + Sbjct 36 MKTFHCNRCAQLVFYENVRCERCESLLGYLPELGEISAFDDAGDGRWRSLHPEANGALFR 95 Query 47 LCANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELH 105 C N + CNW++P+D LC +C LT P+ + + R E AKRRL+ L Sbjct 96 QCHNYAVENVCNWMIPADSPDTLCRACQLTRTIPNLSEPENRLYWYRLEVAKRRLLYTLG 155 Query 106 ELKLPIVGRDQDPDHGLAFRLLSSAH--ENVTTGHQNGVITLDLAEGDDVHREQLRVEMD 163 EL L + RD DP+ GLAF L+ E V TGH NG+ITL++AE DD HRE++R M Sbjct 156 ELGLDVQSRDADPERGLAFEFLADGGDGEPVMTGHDNGLITLNIAEADDAHREKVRTAMG 215 Query 164 EPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGW 223 EPYRTLLGHFRHE GHY+F +LI + +L F +LFGD ADY +AL+ +YR G P W Sbjct 216 EPYRTLLGHFRHETGHYFFSQLIENEPRWLEPFRKLFGDEQADYGEALNTYYRDGAPADW 275 Query 224 QDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGPS 277 Q S++S+YATMH EDWAET+AHYL I D LDT+ GLA P+ T DR + + Sbjct 276 QASYISAYATMHPWEDWAETWAHYLLIVDVLDTSTSYGLALLPDDPSEPTLTDRTPVEDA 335 Query 278 AFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 +F ++ +W PL+++LN +NRS+G D YPF L A V++K+RF+H V+ Sbjct 336 SFGNLMKRWFPLTYALNSLNRSLGMPDGYPFTLAAPVVDKLRFVHRVI 383 >gi|187919120|ref|YP_001888151.1| hypothetical protein Bphyt_4405 [Burkholderia phytofirmans PsJN] gi|187717558|gb|ACD18781.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length=409 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 155/357 (44%), Positives = 213/357 (60%), Gaps = 23/357 (6%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGF-------------SLGR-MALLVIADDADVQ 46 M+ FHC +C + +EN C C S LG+ GR +L A+ A + Sbjct 1 MKTFHCNHCSHLVFYENVRCERCESLLGYVPEVAEISAFEDAGEGRWRSLHPGAEGALFR 60 Query 47 LCANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELH 105 C N + CNW++P+D LC +C LT+ P+ + + R E AKRRL+ L Sbjct 61 QCHNYAVENVCNWMIPADSPDQLCRACQLTLTIPNLSAPDNRLYWYRLEMAKRRLLYTLA 120 Query 106 ELKLPIVGRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMD 163 EL L + R DP+HGLAF L + V TGH NG+ITL++AE DD HRE++R M Sbjct 121 ELGLDVKSRQVDPEHGLAFEFLEDGGDGSRVMTGHDNGLITLNIAEADDAHREKVRTAMG 180 Query 164 EPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGW 223 EPYRTLLGHFRHE GHYYF +L+ ++ +L F +LFGD DY +AL+ +YR G P W Sbjct 181 EPYRTLLGHFRHETGHYYFSQLVENNPRWLEPFRKLFGDESVDYGEALNAYYRDGAPAEW 240 Query 224 QDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGPS 277 Q SF+S+YATMH EDWAET+AHY+ I D LDT+ G+A P+ T DR + + Sbjct 241 QASFISAYATMHPWEDWAETWAHYMLIVDVLDTSTSYGVALLPDDPSEPTLTDRTPVEDA 300 Query 278 AFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEP 334 +F ++ +W PL+++LN +NRS+G D YPF L A V+EK+RF+H V+ +P Sbjct 301 SFENLMKRWFPLTYALNSLNRSLGMPDGYPFTLAAPVVEKLRFVHRVIQAAGDKSQP 357 >gi|296157014|ref|ZP_06839851.1| protein of unknown function UCP012641 [Burkholderia sp. Ch1-1] gi|295892900|gb|EFG72681.1| protein of unknown function UCP012641 [Burkholderia sp. Ch1-1] Length=467 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 151/350 (44%), Positives = 211/350 (61%), Gaps = 25/350 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQ----- 55 M+ FHC +C + +EN C C S LG+ + +A + +DA +LH Sbjct 1 MKTFHCNHCSHLVFYENVRCERCESLLGY-VPELAEISAFEDAGEGRWRSLHPGAEGALF 59 Query 56 -----------CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAEL 104 CNW++P++ LC +C LT+ P+ + + R E AKRRL+ L Sbjct 60 RQCHNYAVENVCNWMIPAESPDVLCRACQLTLTIPNLSAPDNRLYWYRLEMAKRRLLYTL 119 Query 105 HELKLPIVGRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEM 162 EL L + R DP+HGLAF L + V TGH NG+ITL++AE DD +RE++R M Sbjct 120 AELGLDVKSRQADPEHGLAFEFLEDGGDGSRVMTGHDNGLITLNIAEADDAYREKVRTAM 179 Query 163 DEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEG 222 EPYRTLLGHFRHE GHYYF +L+ ++ +L F +LFGD ADY +AL +YR G P Sbjct 180 GEPYRTLLGHFRHETGHYYFSQLVENNPRWLEPFRKLFGDESADYGEALKAYYRDGAPAD 239 Query 223 WQDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGP 276 WQ SF+S+YATMH EDWAET+AHY+ I D LDT+ G+A P+ T DR + Sbjct 240 WQASFISAYATMHPWEDWAETWAHYMLIVDVLDTSTSYGVALLPDDPSEPTLTDRTPVED 299 Query 277 SAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD 326 ++F ++ +W PL+++LN +NRS+G D YPF L A V+EK+RF+H V++ Sbjct 300 ASFENLMKRWFPLTYALNSLNRSLGMPDGYPFTLAAPVVEKLRFVHRVIE 349 >gi|91779372|ref|YP_554580.1| hypothetical protein Bxe_B0724 [Burkholderia xenovorans LB400] gi|91692032|gb|ABE35230.1| conserved hypothetical protein [Burkholderia xenovorans LB400] Length=467 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 151/350 (44%), Positives = 211/350 (61%), Gaps = 25/350 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQ----- 55 M+ FHC +C + +EN C C S LG+ + +A + +DA +LH Sbjct 1 MKTFHCNHCSHLVFYENVRCERCESLLGY-VPELAEISAFEDAGEGRWRSLHPGAGGALF 59 Query 56 -----------CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAEL 104 CNW++P++ LC +C LT+ P+ + + R E AKRRL+ L Sbjct 60 RQCHNYAVENVCNWMIPAESPDVLCRACQLTLTIPNLSAPDNRLYWYRLEMAKRRLLYTL 119 Query 105 HELKLPIVGRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEM 162 EL L + R DP+HGLAF L + V TGH NG+ITL++AE DD +RE++R M Sbjct 120 AELGLDVKSRQADPEHGLAFEFLEDGGDGSRVMTGHDNGLITLNIAEADDAYREKVRTAM 179 Query 163 DEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEG 222 EPYRTLLGHFRHE GHYYF +L+ ++ +L F +LFGD ADY +AL +YR G P Sbjct 180 GEPYRTLLGHFRHETGHYYFSQLVENNPRWLEPFRKLFGDERADYGEALKAYYRDGAPAD 239 Query 223 WQDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGP 276 WQ SF+S+YATMH EDWAET+AHY+ I D LDT+ G+A P+ T DR + Sbjct 240 WQASFISAYATMHPWEDWAETWAHYMLIVDVLDTSTSYGVALLPDDPSEPTLTDRTPVED 299 Query 277 SAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD 326 ++F ++ +W PL+++LN +NRS+G D YPF L A V+EK+RF+H V++ Sbjct 300 ASFENLMKRWFPLTYALNSLNRSLGMPDGYPFTLAAPVVEKLRFVHRVIE 349 >gi|238024603|ref|YP_002908835.1| hypothetical protein bglu_2g12180 [Burkholderia glumae BGR1] gi|237879268|gb|ACR31600.1| Hypothetical protein bglu_2g12180 [Burkholderia glumae BGR1] Length=370 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 161/355 (46%), Positives = 210/355 (60%), Gaps = 26/355 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGF--SLGRM------------ALLVIADDADVQ 46 M+ FHC NC Q + FEN C C + LG+ +G + +L A + Sbjct 1 MKTFHCGNCTQLVFFENVRCERCEAPLGYLPEIGEVGAFEPDASGNWRSLHPAAHGRRYR 60 Query 47 LCANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELH 105 C N + CNW++P++ C +C LT P +N + R E AKRRL+ L Sbjct 61 PCHNYAVENVCNWMIPAESDATYCEACALTETIPDLSNPDNRPLWYRTEVAKRRLLYTLA 120 Query 106 ELKLPIVGRDQDPDHGLAFRLLSSAH-ENVTTGHQNGVITLDLAEGDDVHREQLRVEMDE 164 L LPI R P+ G++F ++ E V TGH NG++TL+LAE DD RE++R M E Sbjct 121 MLGLPIEPRSVFPERGMSFAFKAATETEPVLTGHANGLVTLNLAEADDAERERVRAAMRE 180 Query 165 PYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQ 224 PYRTLLGHFRHEIGHYYF RLIA + +L F E FGD ADY ALD HY+ G P GW Sbjct 181 PYRTLLGHFRHEIGHYYFDRLIAGTP-WLEPFRERFGDERADYQAALDAHYQHGAPAGWH 239 Query 225 DSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA--PASATF----DRPALGPSA 278 D++VS YATMH EDWAET+AHYLHI D LDTA CGL P + D+ ++ ++ Sbjct 240 DAYVSEYATMHPWEDWAETWAHYLHIVDTLDTANACGLVLDPDDESLPRLDDQTSVDEAS 299 Query 279 FNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVD---EVAP 330 F ++ +W PL+++LN +NRSMG D YPF L AV+ K+RF+H VV E AP Sbjct 300 FGNLMRRWFPLTYALNSLNRSMGVADAYPFALSPAVVAKLRFVHRVVTATREAAP 354 >gi|344201228|ref|YP_004785554.1| hypothetical protein Acife_3162 [Acidithiobacillus ferrivorans SS3] gi|343776672|gb|AEM49228.1| protein of unknown function UCP012641 [Acidithiobacillus ferrivorans SS3] Length=352 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 155/348 (45%), Positives = 205/348 (59%), Gaps = 24/348 (6%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLV-------------IADDADVQL 47 M+ F CPNC + FE++ C +C + LGF + + I+ ++Q Sbjct 1 MKTFTCPNCANMVFFESTVCENCNANLGFVPEQQFMAAFFRQMNGSWVPAGISPQYNIQP 60 Query 48 CANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHE 106 C N Q CNW+V D LC SC T P + L + E AKRRLI L Sbjct 61 CRNYESEQVCNWMVAKDDGNDLCQSCRYTEIIPQLSKPENLHYWYLLEAAKRRLIYSLKF 120 Query 107 LKLPIVGRDQDPDHGLAFRLLS-SAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEP 165 L LPI GR DP HGLAFR ++ SA + V TGH +GVITL++ E +D RE+ R M EP Sbjct 121 LGLPIPGRTDDPKHGLAFRFIADSAKKKVLTGHSSGVITLNILEANDAEREKRRFSMHEP 180 Query 166 YRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQD 225 YRTLLGHFRHEIGH+Y+ LIA SS +L F E+FGD DY +AL ++Y+ GP WQ Sbjct 181 YRTLLGHFRHEIGHFYWDYLIAKSS-WLESFREIFGDESRDYQEALQQYYQTGPATNWQM 239 Query 226 SFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-------PASATFDRPALGPSA 278 +++SSYATMH EDWAET+A YLHI+D L+TA G++ AS + L + Sbjct 240 NYISSYATMHPWEDWAETWAQYLHIKDTLETAINWGVSIHVSGQHAASVSEADINLNTQS 299 Query 279 F-NTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVV 325 F +I++WLPL+ LN +NRS+G D YPFVLP V+ K+ F+ +V Sbjct 300 FREMLIEQWLPLTQFLNSMNRSLGQQDSYPFVLPDVVINKLEFVDQLV 347 >gi|333901142|ref|YP_004475015.1| protein of unknown function UCP012641 [Pseudomonas fulva 12-X] gi|333116407|gb|AEF22921.1| protein of unknown function UCP012641 [Pseudomonas fulva 12-X] Length=380 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 167/349 (48%), Positives = 210/349 (61%), Gaps = 27/349 (7%) Query 8 NCGQRLAFENSACLSCGSALGFS--LGRMALLVIAD-------DADVQL---CANLH-LA 54 CGQ + F NS CL+C S LG+ G+M L + D DV+ CANLH A Sbjct 31 TCGQPIFFRNSQCLACQSPLGYEPERGQMVTLHAGEGPHSWRIDGDVRRYRRCANLHSAA 90 Query 55 QCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGR 114 CNWL+P G LC +C L P + +AR E AKRRL+A+L L LP++ + Sbjct 91 GCNWLLPHTSAGELCIACQLNRTIPDLSIPGNEQRWARLEIAKRRLVAQLLNLGLPLISK 150 Query 115 DQDPDHGLAFRLLSS--AHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGH 172 +D + GLAF L + + TGH G+ITL++AE DD REQ R+++ EPYRTLLGH Sbjct 151 REDAERGLAFDFLGPDLSGQPPVTGHARGLITLNIAEADDDVREQTRIQLHEPYRTLLGH 210 Query 173 FRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYA 232 FRHE+GHYY+ RLIA + L+ + LFGD ADY AL RHY GPP WQ SFVS+YA Sbjct 211 FRHEVGHYYWDRLIAGTPR-LNGYRRLFGDERADYGAALQRHYEQGPPADWQASFVSAYA 269 Query 233 TMHASEDWAETFAHYLHIRDALDTAAWCGLAPASAT-----FDRPALG----PSA--FNT 281 TMH EDWAET+AHYLH+ D LDTA G+ F R AL P A F Sbjct 270 TMHPWEDWAETWAHYLHMMDTLDTALSFGMRAGDVELEFRPFTRAALSDPHDPQADEFLR 329 Query 282 IIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAP 330 I+ W+ L+ LN + RSMGH DLYPFVL AV+ K++FIH VV+ +P Sbjct 330 FINAWIELAAMLNELARSMGHKDLYPFVLCPAVVGKLQFIHQVVEAASP 378 >gi|323528552|ref|YP_004230704.1| hypothetical protein BC1001_4241 [Burkholderia sp. CCGE1001] gi|323385554|gb|ADX57644.1| protein of unknown function UCP012641 [Burkholderia sp. CCGE1001] Length=382 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 156/365 (43%), Positives = 213/365 (59%), Gaps = 26/365 (7%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGF--SLGRMALLVIADDAD------------VQ 46 M+ FHC +C + FEN C C + LG+ L ++ A DA + Sbjct 13 MKTFHCNHCSHLVFFENVRCERCEALLGYVPELREISTFEEAGDARWRSLHPQAGGALYK 72 Query 47 LCANLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELH 105 C N + CNW++P+D LC +C LT P+ + R E AKRRL+ L Sbjct 73 QCHNYAVENVCNWMIPADSPDTLCRACQLTRTIPNLGAPDNRLYWYRLEVAKRRLLYTLG 132 Query 106 ELKLPIVGRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMD 163 E L + R +DP+ GLAF L + V TGH NG+ITL++AE DD HRE++R M Sbjct 133 EFGLDVKSRLEDPEQGLAFEFLEDGGDGSRVMTGHDNGLITLNIAEADDAHREKVRTAMG 192 Query 164 EPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGW 223 EPYRTLLGHFRHE GHYYF RL+ ++ +L F LFGD ADY +ALD +YR G P W Sbjct 193 EPYRTLLGHFRHETGHYYFSRLVENNPRWLEPFRALFGDERADYGEALDAYYRDGAPADW 252 Query 224 QDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----PASATF-DRPALGPS 277 Q S++S+YATMH EDWAET+AHY+ I D LDT+ G+A P + T DR + + Sbjct 253 QASYISAYATMHPWEDWAETWAHYMLIVDVLDTSTSYGVALLPDDPGAPTLTDRTPVEDA 312 Query 278 AFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFE---P 334 +F+ ++ +W PL+++LN +NRS+G D YPF L A V++K+RF+H V+ E P Sbjct 313 SFDNLMKRWFPLTYALNSLNRSLGMPDGYPFTLAAPVIDKLRFVHRVIAEAGDQSSAPGP 372 Query 335 AHSRR 339 H +R Sbjct 373 QHEKR 377 >gi|312962449|ref|ZP_07776940.1| hypothetical protein PFWH6_4369 [Pseudomonas fluorescens WH6] gi|311283376|gb|EFQ61966.1| hypothetical protein PFWH6_4369 [Pseudomonas fluorescens WH6] Length=387 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 158/352 (45%), Positives = 208/352 (60%), Gaps = 30/352 (8%) Query 4 FHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIA--------------DDADVQLCA 49 +HC CGQ L F NS CL+C + LG+ + L + D + CA Sbjct 27 WHC-RCGQSLFFRNSQCLACQALLGYQPQQSRLSSLQPGPVEGTWLPDDNLDAGAFRRCA 85 Query 50 NLHL-AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELK 108 NL A CNWL+P+ LC +C L P + + + E AKRRL+A+L L Sbjct 86 NLDTPAACNWLIPAHSTAALCVACSLNRTIPDLSMPENHERWLKVETAKRRLVAQLISLG 145 Query 109 LPIVGRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMDEPY 166 L +V + D D GLAF + E TGH NG+ITLD+ E DD HRE++RV+M EPY Sbjct 146 LQVVPKRADEDTGLAFDFVGVDLEGNAPMTGHANGLITLDIKEADDAHREKIRVQMREPY 205 Query 167 RTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDS 226 RTLLGHFRHE+GHYY+ RLIA+S +L F +LFGD A Y+ ALD+HY+ GP WQ + Sbjct 206 RTLLGHFRHEVGHYYWDRLIANSH-WLEPFRQLFGDERASYADALDQHYQNGPRPDWQHT 264 Query 227 FVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----------PASATFDRPALG 275 VS+YATMH EDWAET+AHYLH+ DA+DTA G++ P + +D G Sbjct 265 CVSAYATMHPWEDWAETWAHYLHMMDAVDTALGFGMSAREMDLDYQPFPLTTLYDPEHPG 324 Query 276 PSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDE 327 AF + ++ W+ L+ LN ++RSMG D YPFVLP AV+ K+ FIH V+ E Sbjct 325 GPAFLSFVNAWIELAGMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQE 376 >gi|70729276|ref|YP_259013.1| hypothetical protein PFL_1894 [Pseudomonas fluorescens Pf-5] gi|68343575|gb|AAY91181.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length=388 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 156/347 (45%), Positives = 208/347 (60%), Gaps = 29/347 (8%) Query 9 CGQRLAFENSACLSCGSALGFS--LGRMALLVIADDADVQL------------CANLHL- 53 CGQ L F NS CL+C + LG++ LG ++ L D + CANL Sbjct 31 CGQSLFFRNSQCLACSAMLGYAPHLGLLSSLQPGPAGDTWVLDAKPEAGAFRRCANLDTP 90 Query 54 AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113 A CNWL+P+ LC +C L P + + + E AKRRL+A+L +L L ++ Sbjct 91 AACNWLLPAHLTDSLCVACKLNRTIPDLSIAENPERWRKVEIAKRRLVAQLLDLGLQVIP 150 Query 114 RDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLG 171 + +D GLAF + E TGH NG+ITLD+ E DD HRE++R +M EPYRTLLG Sbjct 151 KGEDEQAGLAFDFIGVDLEGRAPVTGHANGLITLDIKEADDAHREKIRAQMHEPYRTLLG 210 Query 172 HFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSY 231 HFRHE+GHYY+ RLIA+S +L F LFGD Y+QAL+RHY+ G P GWQ S VS+Y Sbjct 211 HFRHEVGHYYWDRLIANSP-WLEAFRSLFGDERYSYAQALERHYQKGAPAGWQQSHVSAY 269 Query 232 ATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----------PASATFDRPALGPSAFN 280 ATMH EDWAET+AHYLH+ DA+DTA G++ P S+ +D G AF Sbjct 270 ATMHPWEDWAETWAHYLHMVDAVDTALGFGMSARDVDLDYQPFPLSSLYDPQHPGGPAFL 329 Query 281 TIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDE 327 ++ W+ L+ LN ++RSMG D YPF+LP AV+ K+ FIH V+ + Sbjct 330 AFVNAWIELAGMLNELSRSMGQPDFYPFILPPAVIAKLHFIHLVIQQ 376 >gi|120555946|ref|YP_960297.1| hypothetical protein Maqu_3036 [Marinobacter aquaeolei VT8] gi|120325795|gb|ABM20110.1| conserved hypothetical protein [Marinobacter aquaeolei VT8] Length=353 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 158/351 (46%), Positives = 206/351 (59%), Gaps = 29/351 (8%) Query 1 MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDAD-----------VQLCA 49 M+ FHC C L FENS C CG+ LGF+ M LL I + D +LC Sbjct 1 MKLFHCGRCANLLYFENSRCTHCGADLGFAPDVMDLLAIEPEGDNTWATVARGDLYRLCD 60 Query 50 NLHLAQ-CNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELK 108 N + CNWL+P+ C +C L P + + R E KRRL+ + L Sbjct 61 NYQNQRACNWLIPNTDPHTFCVACRLNRTIPDLSIEKNNDLWRRLEKEKRRLVYSVLRLG 120 Query 109 LPIVGRDQDPDHGLAFRLLSSA------HENVTTGHQNGVITLDLAEGDDVHREQLRVEM 162 LP R++D GLAF L+ E VTTGH NGVIT+++AE D V RE++R +M Sbjct 121 LPCEPRNED-QLGLAFDFLADQPAMFDEREKVTTGHANGVITINIAEADPVERERMRNQM 179 Query 163 DEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEG 222 EPYRT+LGHFRHE GHYY + L+ SS +L +F +LFGD DY QALD+HY+ GPP Sbjct 180 AEPYRTVLGHFRHESGHYY-WDLLVRSSPWLGKFRDLFGDETRDYRQALDQHYQYGPPSD 238 Query 223 WQDSFVSSYATMHASEDWAETFAHYLHIRDALDTAAWCGLAPASATFDR------PALGP 276 WQ ++S+YA+ HA EDWAET+AHYLH+ D L+TA GL + + PA P Sbjct 239 WQSRYISAYASSHAWEDWAETWAHYLHMVDTLETAWQLGLRVNTLQLEETNGESGPAFDP 298 Query 277 SA---FNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTV 324 F+ +I WLPL+ +LN +NRSMGHDD YPFVL AV+EK+R +H + Sbjct 299 CQTGDFDALIRHWLPLTLALNSLNRSMGHDDAYPFVLAPAVVEKLRLVHQI 349 >gi|289679602|ref|ZP_06500492.1| hypothetical protein PsyrpsF_40267 [Pseudomonas syringae pv. syringae FF5] Length=388 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 155/350 (45%), Positives = 209/350 (60%), Gaps = 29/350 (8%) Query 8 NCGQRLAFENSACLSCGSALGF--SLGRMALLV---------IADDADVQL---CANLHL 53 CGQ + F N+ CL+C +ALG+ GR+A L ++D+ L CANL Sbjct 30 TCGQSVFFPNTQCLACSAALGYLPEQGRVATLEAGPEPTTWRLSDEPGAGLYRRCANLGT 89 Query 54 -AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 A CNWL P G C +C L P + + + E AKRRL+A+L L L ++ Sbjct 90 PAACNWLFPEHNAGEFCVACSLNHTIPDLSVVENGERWRKVETAKRRLVAQLISLGLQVI 149 Query 113 GRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLL 170 + D + GLAF + E TTGH NG+ITL++ E DD HRE +RV+M EPYRTLL Sbjct 150 PKTVDEETGLAFDFVGVDLEGNLPTTGHANGLITLNIEEADDAHREAMRVQMHEPYRTLL 209 Query 171 GHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSS 230 GHFRHE+GHYY+ RLIA++ + + LFGD A Y+ ALD HY+ G P+ WQ+SFVS+ Sbjct 210 GHFRHEVGHYYWDRLIANTH-WQDSYRNLFGDERASYADALDHHYKNGAPDNWQESFVSA 268 Query 231 YATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----------PASATFDRPALGPSAF 279 YATMH+ EDWAET+AHYLH+ DA+DTA G++ P +D G AF Sbjct 269 YATMHSWEDWAETWAHYLHMMDAVDTALGFGMSARDMELDYQPFPLEVLYDPQHPGGPAF 328 Query 280 NTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVA 329 + ++ W+ L+ LN ++RSMG D YPFVLP AV+ K+ FIH V+ + Sbjct 329 LSFVNAWIELASMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQDAG 378 >gi|302185109|ref|ZP_07261782.1| hypothetical protein Psyrps6_02159 [Pseudomonas syringae pv. syringae 642] Length=388 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 154/350 (44%), Positives = 206/350 (59%), Gaps = 29/350 (8%) Query 8 NCGQRLAFENSACLSCGSALGF--SLGRMALLVIADDADV------------QLCANLHL 53 CGQ + F N+ CL+C +ALG+ GR+A L D+ + CANL Sbjct 30 TCGQSVFFPNTQCLACSAALGYLPEQGRVATLEAGPDSTTWRLSDEPGAGLYRRCANLGT 89 Query 54 -AQCNWLVPSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIV 112 A CNWL P G C +C L P + + + E AKRRL+A+L L L ++ Sbjct 90 PAACNWLFPEHNAGEFCVACSLNRTIPDLSVVENGERWRKVETAKRRLVAQLISLGLQVI 149 Query 113 GRDQDPDHGLAFRLLSSAHEN--VTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLL 170 + D + GLAF + E TTGH NG+ITL++ E DD HRE +RV+M EPYRTLL Sbjct 150 PKTVDEETGLAFDFVGVDLEGNLPTTGHANGLITLNIEEADDAHREAMRVQMHEPYRTLL 209 Query 171 GHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSS 230 GHFRHE+GHYY+ RLIA++ + + LFGD A Y+ ALD HY+ G P+ WQ+SFVS+ Sbjct 210 GHFRHEVGHYYWDRLIANTH-WQDSYRNLFGDERASYADALDHHYKNGAPDDWQESFVSA 268 Query 231 YATMHASEDWAETFAHYLHIRDALDTAAWCGLA-----------PASATFDRPALGPSAF 279 YATMH EDWAET+AHYLH+ DA+DTA G++ P +D G AF Sbjct 269 YATMHPWEDWAETWAHYLHMMDAVDTALGFGMSARDMELDYQPFPLEVLYDPQHPGGPAF 328 Query 280 NTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRFIHTVVDEVA 329 + ++ W+ L+ LN ++RSMG D YPFVLP AV+ K+ FIH V+ + Sbjct 329 LSFVNAWIELASMLNELSRSMGQPDFYPFVLPPAVIAKLHFIHLVIQDAG 378 Lambda K H 0.322 0.137 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 620632698468 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40