BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2576c Length=154 Score E Sequences producing significant alignments: (Bits) Value gi|15609713|ref|NP_217092.1| hypothetical protein Rv2576c [Mycob... 309 1e-82 gi|167968814|ref|ZP_02551091.1| hypothetical protein MtubH3_1258... 285 2e-75 gi|308232179|ref|ZP_07415186.2| hypothetical protein TMAG_02381 ... 278 2e-73 gi|183982164|ref|YP_001850455.1| hypothetical protein MMAR_2151 ... 228 2e-58 gi|240171994|ref|ZP_04750653.1| hypothetical protein MkanA1_2195... 213 6e-54 gi|333991006|ref|YP_004523620.1| hypothetical protein JDM601_236... 182 2e-44 gi|41407154|ref|NP_959990.1| hypothetical protein MAP1056 [Mycob... 150 7e-35 gi|296170807|ref|ZP_06852378.1| conserved hypothetical protein [... 146 8e-34 gi|254823298|ref|ZP_05228299.1| hypothetical protein MintA_25444... 144 3e-33 gi|342858603|ref|ZP_08715258.1| hypothetical protein MCOL_06996 ... 135 1e-30 gi|118463299|ref|YP_882636.1| hypothetical protein MAV_3454 [Myc... 127 5e-28 gi|254775897|ref|ZP_05217413.1| hypothetical protein MaviaA2_146... 127 5e-28 gi|108799259|ref|YP_639456.1| hypothetical protein Mmcs_2292 [My... 120 9e-26 gi|183984660|ref|YP_001852951.1| hypothetical protein MMAR_4692 ... 99.0 2e-19 gi|118616181|ref|YP_904513.1| hypothetical protein MUL_0311 [Myc... 96.3 1e-18 gi|333992918|ref|YP_004525532.1| hypothetical protein JDM601_427... 93.2 1e-17 gi|120403842|ref|YP_953671.1| hypothetical protein Mvan_2859 [My... 91.7 3e-17 gi|118467808|ref|YP_887183.1| hypothetical protein MSMEG_2863 [M... 89.4 2e-16 gi|240171451|ref|ZP_04750110.1| hypothetical protein MkanA1_1921... 88.2 4e-16 gi|108797263|ref|YP_637460.1| hypothetical protein Mmcs_0283 [My... 87.8 5e-16 gi|118469000|ref|YP_887302.1| hypothetical protein MSMEG_2983 [M... 87.0 9e-16 gi|118462977|ref|YP_880226.1| hypothetical protein MAV_0965 [Myc... 83.6 1e-14 gi|254773854|ref|ZP_05215370.1| hypothetical protein MaviaA2_041... 83.6 1e-14 gi|145225108|ref|YP_001135786.1| hypothetical protein Mflv_4530 ... 83.2 1e-14 gi|169629955|ref|YP_001703604.1| hypothetical protein MAB_2871c ... 82.0 3e-14 gi|120403582|ref|YP_953411.1| hypothetical protein Mvan_2597 [My... 80.9 6e-14 gi|296169599|ref|ZP_06851219.1| conserved hypothetical protein [... 79.7 1e-13 gi|41406874|ref|NP_959710.1| hypothetical protein MAP0776c [Myco... 79.7 1e-13 gi|342861411|ref|ZP_08718059.1| hypothetical protein MCOL_21106 ... 79.7 1e-13 gi|315445475|ref|YP_004078354.1| hypothetical protein Mspyr1_393... 78.6 3e-13 gi|342860449|ref|ZP_08717100.1| hypothetical protein MCOL_16281 ... 78.2 3e-13 gi|254818345|ref|ZP_05223346.1| hypothetical protein MintA_00375... 78.2 4e-13 gi|145224379|ref|YP_001135057.1| hypothetical protein Mflv_3797 ... 74.3 6e-12 gi|120405096|ref|YP_954925.1| hypothetical protein Mvan_4142 [My... 73.9 7e-12 gi|315444711|ref|YP_004077590.1| hypothetical protein Mspyr1_313... 73.9 8e-12 gi|145223103|ref|YP_001133781.1| hypothetical protein Mflv_2516 ... 73.2 1e-11 gi|315443560|ref|YP_004076439.1| hypothetical protein Mspyr1_194... 73.2 1e-11 gi|126436251|ref|YP_001071942.1| hypothetical protein Mjls_3674 ... 72.0 3e-11 gi|108800627|ref|YP_640824.1| hypothetical protein Mmcs_3661 [My... 67.8 5e-10 gi|333992102|ref|YP_004524716.1| hypothetical protein JDM601_346... 67.8 5e-10 gi|118468286|ref|YP_889039.1| hypothetical protein MSMEG_4782 [M... 66.2 1e-09 gi|4039164|gb|AAC97520.1| hypothetical protein [Mycobacterium sp... 65.5 3e-09 gi|224826017|ref|ZP_03699120.1| 2-alkenal reductase [Lutiella ni... 40.0 0.13 gi|45775295|gb|AAS77250.1| hypothetical protein [Mycobacterium v... 38.9 0.27 gi|126730979|ref|ZP_01746788.1| methyl-accepting chemotaxis prot... 37.4 0.75 gi|169627668|ref|YP_001701317.1| hypothetical protein MAB_0565c ... 34.7 4.6 gi|302532889|ref|ZP_07285231.1| conserved hypothetical protein [... 34.3 7.2 >gi|15609713|ref|NP_217092.1| hypothetical protein Rv2576c [Mycobacterium tuberculosis H37Rv] gi|15842114|ref|NP_337151.1| hypothetical protein MT2652 [Mycobacterium tuberculosis CDC1551] gi|31793759|ref|NP_856252.1| hypothetical protein Mb2606c [Mycobacterium bovis AF2122/97] 59 more sequence titles Length=154 Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%) Query 1 VPAGVGNASGSVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTS 60 +PAGVGNASGSVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTS Sbjct 1 MPAGVGNASGSVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTS 60 Query 61 DLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGG 120 DLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGG Sbjct 61 DLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGG 120 Query 121 LRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 LRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW Sbjct 121 LRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 >gi|167968814|ref|ZP_02551091.1| hypothetical protein MtubH3_12585 [Mycobacterium tuberculosis H37Ra] gi|308373448|ref|ZP_07432359.2| hypothetical protein TMEG_03252 [Mycobacterium tuberculosis SUMu005] gi|308375547|ref|ZP_07444294.2| hypothetical protein TMGG_02297 [Mycobacterium tuberculosis SUMu007] gi|308337614|gb|EFP26465.1| hypothetical protein TMEG_03252 [Mycobacterium tuberculosis SUMu005] gi|308345947|gb|EFP34798.1| hypothetical protein TMGG_02297 [Mycobacterium tuberculosis SUMu007] Length=140 Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP 74 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP Sbjct 1 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP 60 Query 75 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVD 134 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVD Sbjct 61 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVD 120 Query 135 GQVVVSQDGGSGVQCSTRPW 154 GQVVVSQDGGSGVQCSTRPW Sbjct 121 GQVVVSQDGGSGVQCSTRPW 140 >gi|308232179|ref|ZP_07415186.2| hypothetical protein TMAG_02381 [Mycobacterium tuberculosis SUMu001] gi|308369757|ref|ZP_07418950.2| hypothetical protein TMBG_01116 [Mycobacterium tuberculosis SUMu002] gi|308371059|ref|ZP_07423699.2| hypothetical protein TMCG_01821 [Mycobacterium tuberculosis SUMu003] 13 more sequence titles Length=137 Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 136/137 (99%), Positives = 137/137 (100%), Gaps = 0/137 (0%) Query 18 VRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMA 77 +RTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMA Sbjct 1 MRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMA 60 Query 78 AFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQV 137 AFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQV Sbjct 61 AFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQV 120 Query 138 VVSQDGGSGVQCSTRPW 154 VVSQDGGSGVQCSTRPW Sbjct 121 VVSQDGGSGVQCSTRPW 137 >gi|183982164|ref|YP_001850455.1| hypothetical protein MMAR_2151 [Mycobacterium marinum M] gi|183175490|gb|ACC40600.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=160 Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/153 (74%), Positives = 127/153 (84%), Gaps = 1/153 (0%) Query 3 AGVGNASGSVLDMTSVRTVPSAVALVTFAGAALSGV-IPAIARADPVGHQVTYTVTTTSD 61 A +GN SGSV DMT+VR SAV++ A + V PAIA ADP GHQVTYTVTTTSD Sbjct 8 AAIGNESGSVFDMTNVRKRASAVSVTGAVVALAAVVATPAIAHADPAGHQVTYTVTTTSD 67 Query 62 LMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGL 121 L ANI+YM+ DPPS +AF+ADSSKY+ ++HTPI GGQPLVYTATL NPSQWAIVTASGGL Sbjct 68 LTANIQYMNVDPPSQSAFDADSSKYLTSVHTPITGGQPLVYTATLQNPSQWAIVTASGGL 127 Query 122 RVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 R+NPEFHCEI VDGQVVVSQ+GGSGV CSTRPW Sbjct 128 RINPEFHCEIAVDGQVVVSQNGGSGVTCSTRPW 160 >gi|240171994|ref|ZP_04750653.1| hypothetical protein MkanA1_21950 [Mycobacterium kansasii ATCC 12478] Length=147 Score = 213 bits (543), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 98/115 (86%), Positives = 106/115 (93%), Gaps = 0/115 (0%) Query 40 PAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQP 99 PA++ ADP GHQVTYTVTTTSDLMANI+YM+ADPPS AAFNADSSKYM T+H PI GG+P Sbjct 33 PAVSHADPAGHQVTYTVTTTSDLMANIQYMNADPPSQAAFNADSSKYMTTVHAPITGGEP 92 Query 100 LVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 LVYT TLANP+QWAIVTASGGLRVNPEFHCEI VDGQVVVSQ+GGSGV CSTRPW Sbjct 93 LVYTTTLANPNQWAIVTASGGLRVNPEFHCEIAVDGQVVVSQNGGSGVSCSTRPW 147 >gi|333991006|ref|YP_004523620.1| hypothetical protein JDM601_2366 [Mycobacterium sp. JDM601] gi|333486974|gb|AEF36366.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=182 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 80/106 (76%), Positives = 92/106 (87%), Gaps = 0/106 (0%) Query 49 GHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLAN 108 GH+VTYT+T TSDL NI Y+ DPPSMAA+NA+SS+Y+ T+ PI GGQPLVYTATLA+ Sbjct 77 GHEVTYTITATSDLTGNISYIKTDPPSMAAYNANSSEYLETVRVPIGGGQPLVYTATLAD 136 Query 109 PSQWAIVTASGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 P QWA+VTASGGLR+NPEFHCEI VDG+VVVSQ GGSGV CSTRPW Sbjct 137 PGQWALVTASGGLRINPEFHCEIAVDGEVVVSQQGGSGVTCSTRPW 182 >gi|41407154|ref|NP_959990.1| hypothetical protein MAP1056 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395505|gb|AAS03373.1| hypothetical protein MAP_1056 [Mycobacterium avium subsp. paratuberculosis K-10] Length=162 Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 84/155 (55%), Positives = 107/155 (70%), Gaps = 12/155 (7%) Query 5 VGNASGSVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMA 64 V N SGSV DMT+V SA++ VT A AA+ + PA A AD GHQVTYTVT+ +++ A Sbjct 13 VANESGSVFDMTNVHRTASAISAVTMAVAAV--LTPAAAHAD--GHQVTYTVTSPNNVTA 68 Query 65 NIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVN 124 N+ Y++ADPPS AAFNAD SK+ ++ P++GG P+ YTATLANP+Q+A +TASG L Sbjct 69 NVSYVNADPPSQAAFNADPSKFSTSVQAPLSGGTPVTYTATLANPNQFASITASGMLHWP 128 Query 125 ------PEFHCEIVVDGQVVVSQDGGSGVQCSTRP 153 +FHCEI VDGQVVV QD + V C RP Sbjct 129 DSGNGLAQFHCEIAVDGQVVVQQDATTTVTC--RP 161 >gi|296170807|ref|ZP_06852378.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894543|gb|EFG74281.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=147 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 82/147 (56%), Positives = 102/147 (70%), Gaps = 7/147 (4%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP 74 MT+VR V + VA+ TFA AA V PA + ADP GHQVTYT+T T +L N+RYM++DPP Sbjct 1 MTNVRIVTTGVAVATFAAAAAVAVTPATSSADPAGHQVTYTITATGNLTGNVRYMNSDPP 60 Query 75 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRV-------NPEF 127 S AAFNA+SS+Y+ ++ T A GQPLVY TL +P+QWA V ASGG P+ Sbjct 61 SQAAFNANSSQYLNSVQTAFAAGQPLVYNTTLNDPNQWAFVNASGGCHWPDCDSSNTPQI 120 Query 128 HCEIVVDGQVVVSQDGGSGVQCSTRPW 154 C+I VDGQVVV+Q +GV CSTRPW Sbjct 121 QCQIAVDGQVVVTQSATTGVTCSTRPW 147 >gi|254823298|ref|ZP_05228299.1| hypothetical protein MintA_25444 [Mycobacterium intracellulare ATCC 13950] Length=147 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/147 (54%), Positives = 100/147 (69%), Gaps = 7/147 (4%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP 74 MT+VR + +A TFA AA PA + ADP GHQVTYT+T T +L N+RYM++DPP Sbjct 1 MTNVRIATTGIAAATFAAAAAMIATPATSHADPAGHQVTYTITATGNLTGNVRYMNSDPP 60 Query 75 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRV-------NPEF 127 S AAFN++SS+++ T+ T GQPLVY ATLA+P+QWA V ASGG P+ Sbjct 61 SQAAFNSNSSQFLNTVQTAFTAGQPLVYNATLADPNQWAFVNASGGCHWPDCDSSNMPQI 120 Query 128 HCEIVVDGQVVVSQDGGSGVQCSTRPW 154 C+I VDGQVVV+Q +GV CSTRPW Sbjct 121 QCQIAVDGQVVVTQSATTGVTCSTRPW 147 >gi|342858603|ref|ZP_08715258.1| hypothetical protein MCOL_06996 [Mycobacterium colombiense CECT 3035] gi|342134307|gb|EGT87487.1| hypothetical protein MCOL_06996 [Mycobacterium colombiense CECT 3035] Length=142 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/145 (53%), Positives = 99/145 (69%), Gaps = 10/145 (6%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPP 74 MT+V SA++ VT A AA + + PA A+AD GHQVTYTVT+ ++L AN+ Y++ADPP Sbjct 1 MTNVHRTASAISAVTLAMAAGAVLTPATAQAD--GHQVTYTVTSPNNLTANVSYVNADPP 58 Query 75 SMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLR-----VNP-EFH 128 + AAF AD SK+ ++ P++GG P+ YTATLANP Q+A +TASG L P +FH Sbjct 59 NQAAFTADPSKFSTSVQAPLSGGTPVTYTATLANPKQFASITASGMLHWPDSGNGPAQFH 118 Query 129 CEIVVDGQVVVSQDGGSGVQCSTRP 153 CEI VDGQVV QD + V C RP Sbjct 119 CEIAVDGQVVAQQDATTTVTC--RP 141 >gi|118463299|ref|YP_882636.1| hypothetical protein MAV_3454 [Mycobacterium avium 104] gi|118164586|gb|ABK65483.1| conserved hypothetical protein [Mycobacterium avium 104] Length=127 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 87/122 (72%), Gaps = 10/122 (8%) Query 38 VIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGG 97 + PA A AD GHQVTYTVT+ +++ AN+ Y++ADPPS AAFNAD SK+ ++ P++GG Sbjct 9 LTPAAAHAD--GHQVTYTVTSPNNVTANVSYVNADPPSQAAFNADPSKFSTSVQAPLSGG 66 Query 98 QPLVYTATLANPSQWAIVTASGGLR-----VNP-EFHCEIVVDGQVVVSQDGGSGVQCST 151 P+ YTATLANP+Q+A +TASG L P +FHCEI VDGQVVV QD + V C Sbjct 67 TPVTYTATLANPNQFASITASGMLHWPDSGNGPAQFHCEIAVDGQVVVQQDATTTVTC-- 124 Query 152 RP 153 RP Sbjct 125 RP 126 >gi|254775897|ref|ZP_05217413.1| hypothetical protein MaviaA2_14675 [Mycobacterium avium subsp. avium ATCC 25291] gi|336461516|gb|EGO40384.1| hypothetical protein MAPs_30040 [Mycobacterium avium subsp. paratuberculosis S397] Length=125 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 68/122 (56%), Positives = 87/122 (72%), Gaps = 10/122 (8%) Query 38 VIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGG 97 + PA A AD GHQVTYTVT+ +++ AN+ Y++ADPPS AAFNAD SK+ ++ P++GG Sbjct 7 LTPAAAHAD--GHQVTYTVTSPNNVTANVSYVNADPPSQAAFNADPSKFSTSVQAPLSGG 64 Query 98 QPLVYTATLANPSQWAIVTASGGLR-----VNP-EFHCEIVVDGQVVVSQDGGSGVQCST 151 P+ YTATLANP+Q+A +TASG L P +FHCEI VDGQVVV QD + V C Sbjct 65 TPVTYTATLANPNQFASITASGMLHWPDSGNGPAQFHCEIAVDGQVVVQQDATTTVTC-- 122 Query 152 RP 153 RP Sbjct 123 RP 124 >gi|108799259|ref|YP_639456.1| hypothetical protein Mmcs_2292 [Mycobacterium sp. MCS] gi|119868375|ref|YP_938327.1| hypothetical protein Mkms_2339 [Mycobacterium sp. KMS] gi|126434917|ref|YP_001070608.1| hypothetical protein Mjls_2331 [Mycobacterium sp. JLS] gi|108769678|gb|ABG08400.1| putative conserved membrane protein [Mycobacterium sp. MCS] gi|119694464|gb|ABL91537.1| putative conserved membrane protein [Mycobacterium sp. KMS] gi|126234717|gb|ABN98117.1| putative conserved membrane protein [Mycobacterium sp. JLS] Length=123 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 64/121 (53%), Positives = 80/121 (67%), Gaps = 4/121 (3%) Query 38 VIPAIARADPVG----HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTP 93 V P +A ADP H VTYTV S+L A I Y++ +PPS A F+ADSS+Y+ + P Sbjct 3 VSPVVAHADPAAERGSHMVTYTVVAQSELNAQIYYLATEPPSRADFDADSSRYLTNVKVP 62 Query 94 IAGGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRP 153 + G P V+ TL +P+QWA+V+ASG LRV P FHCEI VD VVV DGGSG QC+ R Sbjct 63 LQPGVPWVFQTTLDDPTQWALVSASGALRVPPNFHCEIAVDSVVVVQSDGGSGTQCALRA 122 Query 154 W 154 W Sbjct 123 W 123 >gi|183984660|ref|YP_001852951.1| hypothetical protein MMAR_4692 [Mycobacterium marinum M] gi|183177986|gb|ACC43096.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=143 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/130 (44%), Positives = 76/130 (59%), Gaps = 3/130 (2%) Query 26 ALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSK 85 A+ T GA L+G P DP HQVTYTV+ S + A+I Y DP + ++ ++ + Sbjct 16 AIATMTGA-LAGA-PKSYADDPPMHQVTYTVSAKSPIYADIYYGDQDPAVFSDYSHNNYQ 73 Query 86 YMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGG 144 + + IA G+P LANP QWA+VTAS G + P+FHC++ VDG V VS+DG Sbjct 74 FTPNIQADIAPGKPWTMQVMLANPDQWAVVTASTGRQQGTPQFHCDLAVDGVVKVSKDGP 133 Query 145 SGVQCSTRPW 154 GV CS R W Sbjct 134 RGVLCSLRIW 143 >gi|118616181|ref|YP_904513.1| hypothetical protein MUL_0311 [Mycobacterium ulcerans Agy99] gi|118568291|gb|ABL03042.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=143 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/130 (43%), Positives = 75/130 (58%), Gaps = 3/130 (2%) Query 26 ALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSK 85 A+ T GA L+G P DP HQVTYTV+ S + A+I Y DP + ++ ++ + Sbjct 16 AIATMTGA-LAGA-PKSYADDPPMHQVTYTVSAKSPIYADIYYGDQDPAVSSDYSHNNYQ 73 Query 86 YMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGG 144 + + IA G+P LANP QWA+VT S G + P+FHC++ VDG V VS+DG Sbjct 74 FTPNIQADIAPGKPWTMQVMLANPDQWAVVTTSTGRQQGTPQFHCDLAVDGVVKVSKDGP 133 Query 145 SGVQCSTRPW 154 GV CS R W Sbjct 134 RGVLCSLRIW 143 >gi|333992918|ref|YP_004525532.1| hypothetical protein JDM601_4278 [Mycobacterium sp. JDM601] gi|333488886|gb|AEF38278.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=134 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/115 (43%), Positives = 65/115 (57%), Gaps = 2/115 (1%) Query 42 IARAD-PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPL 100 +A AD P H V YTVT + + A I Y DPP+ A ++ + ++ + GQP Sbjct 20 VAHADTPTSHHVVYTVTAAAPVTAEIYYRDVDPPTWADYSHNPYEFSPMARVEVGPGQPW 79 Query 101 VYTATLANPSQWAIVTA-SGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 V ATL +P +WA+VTA SG L P FHCE+ VDG VV + DG G C+ R W Sbjct 80 VLHATLTDPQRWAMVTATSGRLSAAPMFHCELSVDGAVVATADGPKGALCALRHW 134 >gi|120403842|ref|YP_953671.1| hypothetical protein Mvan_2859 [Mycobacterium vanbaalenii PYR-1] gi|119956660|gb|ABM13665.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=138 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/139 (40%), Positives = 74/139 (54%), Gaps = 4/139 (2%) Query 18 VRTVPSAVALVTFAGAALSGVIPAIARADPVG-HQVTYTVTTTSDLMANIRYMSADPPSM 76 +R S+V + A LS P +ARADP Q+TYTVTT + A+I Y DPP+ Sbjct 2 MRKALSSVVIAVAATITLSA--PGVARADPPALRQITYTVTTEHPVTADIYYRDVDPPTW 59 Query 77 AAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTA-SGGLRVNPEFHCEIVVDG 135 A ++ + Y + P V A L +P WA+V+A SG L V P+F CE+ VDG Sbjct 60 ADYSHNPYLYSPKARVDVGPDTPWVLHAVLTDPDSWAMVSATSGRLPVEPQFRCELAVDG 119 Query 136 QVVVSQDGGSGVQCSTRPW 154 VV + +G G CS R W Sbjct 120 VVVATAEGPRGALCSVRHW 138 >gi|118467808|ref|YP_887183.1| hypothetical protein MSMEG_2863 [Mycobacterium smegmatis str. MC2 155] gi|118169095|gb|ABK69991.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=139 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/118 (41%), Positives = 65/118 (56%), Gaps = 2/118 (1%) Query 39 IPAIARADPVG-HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGG 97 +P A ADP HQVTYTVT + A+I Y DPP+ A ++ + + + G Sbjct 22 LPVPAHADPAPLHQVTYTVTAQTPTRADIYYRETDPPNWADYSHNPYVFSPKAEVEVGPG 81 Query 98 QPLVYTATLANPSQWAIVTASGGL-RVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 P V T LA+P +WA+V+A+ G P FHCE+ VDG VV + DG G C+ R W Sbjct 82 APWVLTVQLADPDRWAMVSATSGRGPATPAFHCELAVDGVVVATGDGPKGALCAVRHW 139 >gi|240171451|ref|ZP_04750110.1| hypothetical protein MkanA1_19211 [Mycobacterium kansasii ATCC 12478] Length=141 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/106 (44%), Positives = 60/106 (57%), Gaps = 1/106 (0%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 HQV YTV+ + + A+I Y DP + ++ + ++ + IA +P LANP Sbjct 36 HQVRYTVSAKNPIYADIYYQDQDPAVFSDYSHNPYQFTPNIQADIAPDRPWTMQVMLANP 95 Query 110 SQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 QWA VTAS G P FHCEI VDG VVV++DG GV CS R W Sbjct 96 DQWATVTASTGPEPGTPMFHCEIAVDGVVVVAKDGPRGVLCSLRNW 141 >gi|108797263|ref|YP_637460.1| hypothetical protein Mmcs_0283 [Mycobacterium sp. MCS] gi|119866348|ref|YP_936300.1| hypothetical protein Mkms_0293 [Mycobacterium sp. KMS] gi|126432887|ref|YP_001068578.1| hypothetical protein Mjls_0274 [Mycobacterium sp. JLS] gi|108767682|gb|ABG06404.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119692437|gb|ABL89510.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126232687|gb|ABN96087.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=134 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/129 (38%), Positives = 71/129 (56%), Gaps = 5/129 (3%) Query 31 AGAALSGVI----PAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKY 86 A AA++G+I P + PV H V YTVT A+I Y + DPP+ A ++ + ++ Sbjct 6 APAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSHNPYRF 65 Query 87 MITLHTPIAGGQPLVYTATLANPSQWAIVTASGGLRVN-PEFHCEIVVDGQVVVSQDGGS 145 + P V+ TL +P++WA+VTA+ G+ + P F CE+ VDG VV S +G Sbjct 66 SPKAEVVLDPASPWVFDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVASHEGPK 125 Query 146 GVQCSTRPW 154 G CS R W Sbjct 126 GALCSQRSW 134 >gi|118469000|ref|YP_887302.1| hypothetical protein MSMEG_2983 [Mycobacterium smegmatis str. MC2 155] gi|118170287|gb|ABK71183.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=143 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 76/144 (53%), Gaps = 5/144 (3%) Query 15 MTSVRTVPSAV-ALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADP 73 MT++R V V A V A A+++ V A A A+P GHQV YT+T+ + ++ Y++ P Sbjct 1 MTNMRNVTKRVGAAVLAASASIAVVGQATAHAEPEGHQVRYTLTSGAPYEFDLYYLATQP 60 Query 74 PSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASG---GLRVNPEFHCE 130 AA++AD Y+ +A P V+ TLA+P QWAI T S G R P HCE Sbjct 61 ADKAAYDADPYAYLQKAEVNVAPDAPWVFETTLADP-QWAIFTVSSTTHGGRGAPNAHCE 119 Query 131 IVVDGQVVVSQDGGSGVQCSTRPW 154 I VDG++ D +C W Sbjct 120 IAVDGEIATQNDHPYSPRCQLGNW 143 >gi|118462977|ref|YP_880226.1| hypothetical protein MAV_0965 [Mycobacterium avium 104] gi|118164264|gb|ABK65161.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336461204|gb|EGO40080.1| hypothetical protein MAPs_32890 [Mycobacterium avium subsp. paratuberculosis S397] Length=147 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/124 (38%), Positives = 66/124 (54%), Gaps = 5/124 (4%) Query 36 SGVIPAIARAD----PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLH 91 SGV+ RA PV H V YTVT + + +I Y+ +P A ++ + + + Sbjct 24 SGVLVGAGRAHADDPPVMHHVKYTVTAQNPIYTSIYYLDHEPAIFADYSHNPYSFTPHVD 83 Query 92 TPIAGGQPLVYTATLANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCS 150 +A G+P Y L+ P +A+V AS G P HC++ VDG VVVS+DG GV CS Sbjct 84 VDLAPGKPWSYELDLSKPEVYAMVVASTGTEPGTPGLHCDLTVDGAVVVSKDGPKGVLCS 143 Query 151 TRPW 154 RPW Sbjct 144 IRPW 147 >gi|254773854|ref|ZP_05215370.1| hypothetical protein MaviaA2_04137 [Mycobacterium avium subsp. avium ATCC 25291] Length=139 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/124 (38%), Positives = 66/124 (54%), Gaps = 5/124 (4%) Query 36 SGVIPAIARAD----PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLH 91 SGV+ RA PV H V YTVT + + +I Y+ +P A ++ + + + Sbjct 16 SGVLVGAGRAHADDPPVMHHVKYTVTAQNPIYTSIYYLDHEPAIFADYSHNPYSFTPHVD 75 Query 92 TPIAGGQPLVYTATLANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCS 150 +A G+P Y L+ P +A+V AS G P HC++ VDG VVVS+DG GV CS Sbjct 76 VDLAPGKPWSYELDLSKPEVYAMVVASTGTEPGTPGLHCDLTVDGAVVVSKDGPKGVLCS 135 Query 151 TRPW 154 RPW Sbjct 136 IRPW 139 >gi|145225108|ref|YP_001135786.1| hypothetical protein Mflv_4530 [Mycobacterium gilvum PYR-GCK] gi|145217594|gb|ABP46998.1| hypothetical protein Mflv_4530 [Mycobacterium gilvum PYR-GCK] Length=136 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/104 (42%), Positives = 60/104 (58%), Gaps = 1/104 (0%) Query 52 VTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQ 111 VTYTVT + A+I Y DPP+ A ++ + ++ + GQP V + LA+P + Sbjct 33 VTYTVTADRHVSADIYYRDTDPPTWADYSHNPYQFSPRARVDVGPGQPWVRSLVLADPQR 92 Query 112 WAIVTA-SGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 WA+V+A SG L V F CE+ VDG+VV + DG G CS R W Sbjct 93 WAMVSATSGPLPVESGFRCELAVDGEVVATGDGPRGALCSLRHW 136 >gi|169629955|ref|YP_001703604.1| hypothetical protein MAB_2871c [Mycobacterium abscessus ATCC 19977] gi|169241922|emb|CAM62950.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=140 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/108 (39%), Positives = 62/108 (58%), Gaps = 3/108 (2%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 HQV Y +++ D ++ + +PPS +A++ +SSKY++ T IA P V TL +P Sbjct 33 HQVKYVISSDRDFLSQTLVLQNEPPSKSAYDTESSKYLVRNSTRIAPDAPFVVETTLNDP 92 Query 110 SQWAIVTASGGLRVN---PEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 +QWA V+AS + P FHCE+ VDG + DG + V CS R W Sbjct 93 TQWAYVSASAAAKAVTGAPVFHCEVYVDGALATQADGETAVTCSLRQW 140 >gi|120403582|ref|YP_953411.1| hypothetical protein Mvan_2597 [Mycobacterium vanbaalenii PYR-1] gi|119956400|gb|ABM13405.1| putative conserved membrane protein [Mycobacterium vanbaalenii PYR-1] Length=141 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/120 (38%), Positives = 67/120 (56%), Gaps = 5/120 (4%) Query 38 VIPAIARADPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGG 97 + PA+A A GHQV YT+T+ ++ Y+++ PPSM AFNAD+ + +A G Sbjct 24 ISPAMAGAQD-GHQVRYTLTSAGAYEFDLFYLTSQPPSMEAFNADAYAFAKREKVNLAPG 82 Query 98 QPLVYTATLANPSQWAIVTASG---GLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 P V+ T+A+P+ WAI+ S G + P HC+I VDGQV+ + V+C W Sbjct 83 VPWVFETTMADPN-WAILQVSSTTRGGQAAPNAHCDIAVDGQVLTEHNDPYNVRCQLGQW 141 >gi|296169599|ref|ZP_06851219.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895865|gb|EFG75560.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=142 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 66/125 (53%), Gaps = 4/125 (3%) Query 34 ALSGVIPAIARA--DPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLH 91 AL+G++ RA DPV HQV Y V++TS +I Y DP + ++ + + +H Sbjct 18 ALTGLLVNTGRAQADPVWHQVVYIVSSTSPAYVDIFYQDQDPTLFSDYSHNPYAFTPQVH 77 Query 92 TPIAGGQPLVYTATLANPSQWAIVTASGGLRVNPE--FHCEIVVDGQVVVSQDGGSGVQC 149 + +P V L NP QWA+VT + G + C++ VDG+VVVS+ G G C Sbjct 78 ADVGPDKPWVQPVNLLNPDQWAMVTVTTGREPMAQGGIQCDLSVDGKVVVSKIGPKGALC 137 Query 150 STRPW 154 S R W Sbjct 138 SLRTW 142 >gi|41406874|ref|NP_959710.1| hypothetical protein MAP0776c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395224|gb|AAS03093.1| hypothetical protein MAP_0776c [Mycobacterium avium subsp. paratuberculosis K-10] Length=147 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/124 (38%), Positives = 65/124 (53%), Gaps = 5/124 (4%) Query 36 SGVIPAIARAD----PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLH 91 SGV+ RA PV V YTVT + + +I Y+ +P A ++ + + + Sbjct 24 SGVLVGAGRAHADDPPVMDHVKYTVTAQNPIYTSIYYLDHEPAIFADYSRNPYSFTPHVD 83 Query 92 TPIAGGQPLVYTATLANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCS 150 +A G+P Y L+ P +A+V AS G P HC++ VDG VVVS+DG GV CS Sbjct 84 VDLAPGKPWSYELDLSKPEVYAMVVASTGTEPGTPGLHCDLTVDGAVVVSKDGPKGVLCS 143 Query 151 TRPW 154 RPW Sbjct 144 IRPW 147 >gi|342861411|ref|ZP_08718059.1| hypothetical protein MCOL_21106 [Mycobacterium colombiense CECT 3035] gi|342131311|gb|EGT84592.1| hypothetical protein MCOL_21106 [Mycobacterium colombiense CECT 3035] Length=108 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 55/106 (52%), Gaps = 1/106 (0%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 H VTYTVT + I + DPP+ A ++ D ++ + + G + LA+P Sbjct 3 HHVTYTVTAERPVHVYIYFRDTDPPNWAEYSHDPYQFSPKVEADVGPGARWTHEVMLADP 62 Query 110 SQWAIVTASGGLR-VNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 QWA+VT +GG FHCE+ VDG VV S +G G CS R W Sbjct 63 EQWAMVTVTGGPSAATAGFHCELSVDGAVVASNNGAKGALCSMRHW 108 >gi|315445475|ref|YP_004078354.1| hypothetical protein Mspyr1_39300 [Mycobacterium sp. Spyr1] gi|315263778|gb|ADU00520.1| hypothetical protein Mspyr1_39300 [Mycobacterium sp. Spyr1] Length=136 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/109 (39%), Positives = 59/109 (55%), Gaps = 1/109 (0%) Query 47 PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATL 106 P Q+TYTVT + A+I Y DPP+ A ++ + +Y I QP V + L Sbjct 28 PTPRQITYTVTADRPVSADIYYRDTDPPNWADYSHNPYRYSPRARVDIGPQQPWVRSVVL 87 Query 107 ANPSQWAIVTA-SGGLRVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 A+P +WA+V+A SG V+ C + VDGQVV + +G G CS R W Sbjct 88 ADPDRWAMVSATSGAGPVDSGLRCALAVDGQVVATGEGPHGALCSLRHW 136 >gi|342860449|ref|ZP_08717100.1| hypothetical protein MCOL_16281 [Mycobacterium colombiense CECT 3035] gi|342132104|gb|EGT85345.1| hypothetical protein MCOL_16281 [Mycobacterium colombiense CECT 3035] Length=139 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/110 (36%), Positives = 60/110 (55%), Gaps = 1/110 (0%) Query 46 DPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTAT 105 DPV H V YTV+ + + +I Y+ P + ++ + + + +A G+P + Sbjct 30 DPVMHHVRYTVSAQNPIYTSIYYLDHQPEKFSDYSHNPYSFTPHVDVDLAPGKPWGFDLD 89 Query 106 LANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 +++P +A+V AS G P HCE+ VDG VVVS+DG GV CS R W Sbjct 90 MSDPDHYAMVVASTGTEPGTPGLHCELAVDGAVVVSKDGPKGVLCSLRNW 139 >gi|254818345|ref|ZP_05223346.1| hypothetical protein MintA_00375 [Mycobacterium intracellulare ATCC 13950] Length=121 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/110 (38%), Positives = 60/110 (55%), Gaps = 1/110 (0%) Query 46 DPVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTAT 105 D V H V YTV+T + + +I Y+ +P A ++ + + + +A G+P Y Sbjct 12 DLVMHHVKYTVSTQNPIYTSIYYLDHEPAIFADYSHNPYSFTPHVDVDLAPGKPWSYELD 71 Query 106 LANPSQWAIVTASGGLRV-NPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 L+ P +A+V AS G P HC++ VDG VVVS+DG GV CS R W Sbjct 72 LSKPDVYAMVVASTGTEPGTPNLHCDLAVDGAVVVSKDGPKGVLCSLRHW 121 >gi|145224379|ref|YP_001135057.1| hypothetical protein Mflv_3797 [Mycobacterium gilvum PYR-GCK] gi|145216865|gb|ABP46269.1| hypothetical protein Mflv_3797 [Mycobacterium gilvum PYR-GCK] Length=142 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/108 (36%), Positives = 56/108 (52%), Gaps = 4/108 (3%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 HQV YT+T+ ++ Y++ PPSM AFNAD+ Y +A G P + T+A+P Sbjct 36 HQVRYTLTSAGAYEFDLFYLTTQPPSMQAFNADAYAYAKREKVNLAPGVPWTFETTMADP 95 Query 110 SQWAIVTASGGLR---VNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 + WAI+ S R P HC+I VDG++ + V+C W Sbjct 96 N-WAILQVSSTTRGGQAAPNAHCDIAVDGEIRTEHNDPYNVRCQLGQW 142 >gi|120405096|ref|YP_954925.1| hypothetical protein Mvan_4142 [Mycobacterium vanbaalenii PYR-1] gi|119957914|gb|ABM14919.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=146 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/146 (34%), Positives = 69/146 (48%), Gaps = 6/146 (4%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLM-ANIRYMSADP 73 M +T+P ALV AA + V A A P H+V YTV + D+ A I + DP Sbjct 1 MVFYKTLPVVAALVAGTFAASTVVAGGTAAAQPPLHRVQYTVGASQDIANAEIYWRQVDP 60 Query 74 PSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTA-----SGGLRVNPEFH 128 P A++ + ++ + + Q V+ LA+P+QWA+V S P F Sbjct 61 PDWGAYSHNPYEFTPNVEANLGPNQAWVHETWLADPNQWAMVVVGLPAQSTPPLAEPGFV 120 Query 129 CEIVVDGQVVVSQDGGSGVQCSTRPW 154 CE+ VD VV + G G CS RPW Sbjct 121 CELKVDDVVVATDAGTKGALCSMRPW 146 >gi|315444711|ref|YP_004077590.1| hypothetical protein Mspyr1_31380 [Mycobacterium sp. Spyr1] gi|315263014|gb|ADT99755.1| hypothetical protein Mspyr1_31380 [Mycobacterium sp. Spyr1] Length=120 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/108 (36%), Positives = 56/108 (52%), Gaps = 4/108 (3%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 HQV YT+T+ ++ Y++ PPSM AFNAD+ Y +A G P + T+A+P Sbjct 14 HQVRYTLTSAGAYEFDLFYLTTQPPSMQAFNADAYAYAKREKVNLAPGVPWTFETTMADP 73 Query 110 SQWAIVTASGGLR---VNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 + WAI+ S R P HC+I VDG++ + V+C W Sbjct 74 N-WAILQVSSTTRGGQAAPNAHCDIAVDGEIRTEHNDPYNVRCQLGQW 120 >gi|145223103|ref|YP_001133781.1| hypothetical protein Mflv_2516 [Mycobacterium gilvum PYR-GCK] gi|145215589|gb|ABP44993.1| hypothetical protein Mflv_2516 [Mycobacterium gilvum PYR-GCK] Length=146 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/149 (33%), Positives = 72/149 (49%), Gaps = 12/149 (8%) Query 15 MTSVRTVP---SAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLM-ANIRYMS 70 M +T+P + VA + A A ++G A A P H V YTV + D++ A I Y Sbjct 1 MVFCKTLPLLAAPVAGLLTASAVMAG---GTAAAQPQMHHVKYTVGASQDVVNAEIYYRE 57 Query 71 ADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIV-----TASGGLRVNP 125 DPP+ A ++ + Y + +P V+ LA+P+QW++V T + P Sbjct 58 KDPPNWAEYSHNPYLYTPNQEATLGPNKPWVFETWLADPNQWSMVVVGLPTETTPPLAEP 117 Query 126 EFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 F CE+ VD VV + G G CS RPW Sbjct 118 GFVCELRVDDVVVATDSGLRGALCSQRPW 146 >gi|315443560|ref|YP_004076439.1| hypothetical protein Mspyr1_19430 [Mycobacterium sp. Spyr1] gi|315261863|gb|ADT98604.1| hypothetical protein Mspyr1_19430 [Mycobacterium sp. Spyr1] Length=146 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/149 (33%), Positives = 72/149 (49%), Gaps = 12/149 (8%) Query 15 MTSVRTVP---SAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLM-ANIRYMS 70 M +T+P + VA + A A ++G A A P H V YTV + D++ A I Y Sbjct 1 MVFCKTLPLLAAPVAGLLTASAVIAG---GTAAAQPQMHHVKYTVGASQDVVNAEIYYRE 57 Query 71 ADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIV-----TASGGLRVNP 125 DPP+ A ++ + Y + +P V+ LA+P+QW++V T + P Sbjct 58 KDPPNWAEYSHNPYLYTPNQEATLGPNKPWVFETWLADPNQWSMVVVGLPTETTPPLAEP 117 Query 126 EFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 F CE+ VD VV + G G CS RPW Sbjct 118 GFVCELRVDDVVVATDSGLRGALCSQRPW 146 >gi|126436251|ref|YP_001071942.1| hypothetical protein Mjls_3674 [Mycobacterium sp. JLS] gi|126236051|gb|ABN99451.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=153 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/151 (36%), Positives = 68/151 (46%), Gaps = 9/151 (5%) Query 13 LDMTSVRTVPSAV-ALVTFAGAALSGVI--PAIARAD-----PVGHQVTYTVTTTSDLMA 64 L T+ RT S V AL++ A GV+ PA A A P H V YTV Sbjct 3 LSQTNGRTRRSVVPALISVTAIAAGGVLFTPAHAGAQGPPPLPPLHNVKYTVFAEQPFFV 62 Query 65 NIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTASGGL-RV 123 +I Y DP + AA++ + Y + + Q LA P QWA+VTA+ G Sbjct 63 DIYYRDVDPENWAAYSHNPYVYSPKVAAQVGPDQQWNLDVQLAKPDQWAMVTATSGPGEQ 122 Query 124 NPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 P HC + VDG VV + G G CS R W Sbjct 123 TPNIHCVLAVDGVVVATHQGPKGALCSIRKW 153 >gi|108800627|ref|YP_640824.1| hypothetical protein Mmcs_3661 [Mycobacterium sp. MCS] gi|119869766|ref|YP_939718.1| hypothetical protein Mkms_3734 [Mycobacterium sp. KMS] gi|108771046|gb|ABG09768.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695855|gb|ABL92928.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=153 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/109 (35%), Positives = 49/109 (45%), Gaps = 1/109 (0%) Query 47 PVGHQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATL 106 P H V YTV +I Y DP + AA++ + Y + + Q L Sbjct 45 PPLHNVKYTVFAEQPFFVDIYYRDVDPENWAAYSHNPYVYSPKVAAQVGPDQQWNLDVQL 104 Query 107 ANPSQWAIVTASGGL-RVNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 A P QWA+VTA+ G P HC + VDG VV + G G CS R W Sbjct 105 AKPDQWAMVTATSGPGEQTPNIHCVLAVDGVVVATHQGPKGALCSIRKW 153 >gi|333992102|ref|YP_004524716.1| hypothetical protein JDM601_3462 [Mycobacterium sp. JDM601] gi|333488070|gb|AEF37462.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=143 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/109 (34%), Positives = 53/109 (49%), Gaps = 4/109 (3%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 H+V Y V+ T ANI Y PP+ ++ + +Y I QP ++ TLA+P Sbjct 35 HRVRYLVSATETAQANIYYREVQPPNFGDYSHNPYQYSPRADVTIGPNQPWIFETTLADP 94 Query 110 SQWAIVTAS-GGLR---VNPEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 WA+V S G+ +P F CE+ +D VV + G G CS R W Sbjct 95 QDWAMVVVSLPGMHPQLASPGFVCELRIDDVVVATDAGTKGALCSLRTW 143 >gi|118468286|ref|YP_889039.1| hypothetical protein MSMEG_4782 [Mycobacterium smegmatis str. MC2 155] gi|118169573|gb|ABK70469.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=139 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/108 (34%), Positives = 52/108 (49%), Gaps = 3/108 (2%) Query 50 HQVTYTVTTTSDLMANIRYMSADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANP 109 H V YTVT + A+I Y P + ++ + + +A +P V+ LA+P Sbjct 32 HHVRYTVTADAPFWAHIYYRDTQPAIFSDYSHNPYVFSPRAEADVAPDKPWVHETMLADP 91 Query 110 SQWAIVTASGGLRVN---PEFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 + WA+V G N P F+CE+ VDG VV + G G CS R W Sbjct 92 NLWAMVVVQSGEAPNLEPPGFNCELAVDGVVVKTDSGPKGALCSIRAW 139 >gi|4039164|gb|AAC97520.1| hypothetical protein [Mycobacterium sp. FM10] Length=146 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/149 (31%), Positives = 70/149 (47%), Gaps = 12/149 (8%) Query 15 MTSVRTVPS---AVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLM-ANIRYMS 70 M +T+P +VA + AG+ ++G A A P + YTV + D+ A I + Sbjct 1 MVFYKTLPVLAVSVAALCTAGSVIAG---GTAAAQPPLRHIQYTVGASQDIANAEIYWRQ 57 Query 71 ADPPSMAAFNADSSKYMITLHTPIAGGQPLVYTATLANPSQWAIVTA-----SGGLRVNP 125 DPP A++ + ++ + + Q V+ LA+P QWA+V S +P Sbjct 58 IDPPDWGAYSHNPYEFTPNVEANLGPNQAWVHETWLADPDQWAMVVVGLPAQSTPPLADP 117 Query 126 EFHCEIVVDGQVVVSQDGGSGVQCSTRPW 154 F CE+ VD V+ + G G CS RPW Sbjct 118 GFVCELRVDDVVLATDAGTKGALCSLRPW 146 >gi|224826017|ref|ZP_03699120.1| 2-alkenal reductase [Lutiella nitroferrum 2002] gi|224601654|gb|EEG07834.1| 2-alkenal reductase [Lutiella nitroferrum 2002] Length=625 Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/85 (38%), Positives = 38/85 (45%), Gaps = 12/85 (14%) Query 6 GNASGSVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMAN 65 G SG V D+ V P + + T G A P IAR PV Q T T TT SDL Sbjct 355 GVLSGEVSDIVLVDVTPLTLGVETLGGVA----TPLIARNTPVPVQKTETFTTASDLQTA 410 Query 66 I--------RYMSADPPSMAAFNAD 82 + R M+AD S+ FN D Sbjct 411 VTIHVYQGERAMAADNVSLGEFNLD 435 >gi|45775295|gb|AAS77250.1| hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=123 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/93 (30%), Positives = 42/93 (46%), Gaps = 1/93 (1%) Query 15 MTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLM-ANIRYMSADP 73 M +T+P ALV AA + V A A P H+V YTV + D+ A I + DP Sbjct 1 MVFYKTLPVVAALVAGTFAASTVVAGGTAAAQPPLHRVQYTVGASQDIANAEIYWRQVDP 60 Query 74 PSMAAFNADSSKYMITLHTPIAGGQPLVYTATL 106 P A++ + ++ + + Q V+ L Sbjct 61 PDWGAYSHNPYEFTPNVEANLGPNQAWVHETWL 93 >gi|126730979|ref|ZP_01746788.1| methyl-accepting chemotaxis protein McpI [Sagittula stellata E-37] gi|126708695|gb|EBA07752.1| methyl-accepting chemotaxis protein McpI [Sagittula stellata E-37] Length=519 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 24/71 (34%), Positives = 36/71 (51%), Gaps = 0/71 (0%) Query 11 SVLDMTSVRTVPSAVALVTFAGAALSGVIPAIARADPVGHQVTYTVTTTSDLMANIRYMS 70 SVL S R V + V LV AGA L GV+ A+ +A + TV T S +A++++ Sbjct 405 SVLINDSARQVQNGVELVDNAGAVLRGVLEAVRKASDAMQNIAETVGTHSQGIADLKHTM 464 Query 71 ADPPSMAAFNA 81 + + NA Sbjct 465 GELDQLTQQNA 475 >gi|169627668|ref|YP_001701317.1| hypothetical protein MAB_0565c [Mycobacterium abscessus ATCC 19977] gi|169239635|emb|CAM60663.1| Hypothetical protein MAB_0565c [Mycobacterium abscessus] Length=121 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 13/27 (49%), Positives = 16/27 (60%), Gaps = 0/27 (0%) Query 126 EFHCEIVVDGQVVVSQDGGSGVQCSTR 152 +C I+VDGQ V+S DG V C R Sbjct 88 HIYCRILVDGQTVLSNDGEKTVNCQDR 114 >gi|302532889|ref|ZP_07285231.1| conserved hypothetical protein [Streptomyces sp. C] gi|302441784|gb|EFL13600.1| conserved hypothetical protein [Streptomyces sp. C] Length=839 Score = 34.3 bits (77), Expect = 7.2, Method: Compositional matrix adjust. Identities = 22/49 (45%), Positives = 26/49 (54%), Gaps = 2/49 (4%) Query 96 GGQPLVYTATLANPSQWAIVTASGGLRVNPEFHCEIVVDGQVVVSQDGG 144 G +PLV T+ NP+ I GG V E CE+VV GQ VS GG Sbjct 129 GARPLVRRCTVENPAGVGISVLDGGGGVFEE--CEVVVAGQAGVSVRGG 175 Lambda K H 0.316 0.129 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131222683000 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40