BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2582 Length=308 Score E Sequences producing significant alignments: (Bits) Value gi|15609719|ref|NP_217098.1| peptidyl-prolyl cis-trans isomerase... 626 2e-177 gi|306789983|ref|ZP_07428305.1| peptidyl-prolyl-cis-trans-isomer... 625 3e-177 gi|31793766|ref|NP_856259.1| peptidyl-prolyl cis-trans isomerase... 624 5e-177 gi|308405438|ref|ZP_07494381.2| peptidyl-prolyl-cis-trans-isomer... 591 5e-167 gi|308369760|ref|ZP_07418957.2| peptidyl-prolyl-cis-trans-isomer... 590 1e-166 gi|289746374|ref|ZP_06505752.1| peptidyl-prolyl-cis-trans-isomer... 550 1e-154 gi|308232181|ref|ZP_07415193.2| peptidyl-prolyl-cis-trans-isomer... 509 2e-142 gi|308371062|ref|ZP_07423705.2| peptidyl-prolyl-cis-trans-isomer... 508 6e-142 gi|308375546|ref|ZP_07668054.1| peptidyl-prolyl-cis-trans-isomer... 463 2e-128 gi|41407148|ref|NP_959984.1| PpiB [Mycobacterium avium subsp. pa... 444 1e-122 gi|336461522|gb|EGO40390.1| peptidyl-prolyl cis-trans isomerase ... 442 4e-122 gi|118464361|ref|YP_882644.1| peptidyl-prolyl cis-trans isomeras... 438 6e-121 gi|118617354|ref|YP_905686.1| peptidyl-prolyl cis-trans isomeras... 421 8e-116 gi|183982139|ref|YP_001850430.1| peptidyl-prolyl cis-trans isome... 417 1e-114 gi|254820461|ref|ZP_05225462.1| PpiB [Mycobacterium intracellula... 412 4e-113 gi|240171982|ref|ZP_04750641.1| peptidyl-prolyl cis-trans isomer... 410 1e-112 gi|15827168|ref|NP_301431.1| peptidyl-prolyl cis-trans isomerase... 406 2e-111 gi|296170821|ref|ZP_06852389.1| peptidyl-prolyl cis-trans isomer... 405 3e-111 gi|342858594|ref|ZP_08715249.1| peptidyl-prolyl cis-trans isomer... 390 1e-106 gi|333991009|ref|YP_004523623.1| peptidyl-prolyl cis-trans isome... 341 8e-92 gi|315444725|ref|YP_004077604.1| peptidyl-prolyl cis-trans isome... 323 2e-86 gi|108799250|ref|YP_639447.1| cyclophilin type peptidyl-prolyl c... 323 3e-86 gi|145224393|ref|YP_001135071.1| cyclophilin type peptidyl-proly... 322 3e-86 gi|169629958|ref|YP_001703607.1| peptidyl-prolyl cis-trans isome... 322 5e-86 gi|118468823|ref|YP_887293.1| peptidyl-prolyl cis-trans isomeras... 296 4e-78 gi|120403573|ref|YP_953402.1| cyclophilin type peptidyl-prolyl c... 295 7e-78 gi|118469332|ref|YP_887292.1| peptidyl-prolyl cis-trans isomeras... 272 4e-71 gi|108799249|ref|YP_639446.1| cyclophilin type peptidyl-prolyl c... 265 7e-69 gi|126434907|ref|YP_001070598.1| cyclophilin type peptidyl-proly... 265 1e-68 gi|54025635|ref|YP_119877.1| putative peptidyl-prolyl cis-trans ... 249 3e-64 gi|296170826|ref|ZP_06852391.1| peptidyl-prolyl cis-trans isomer... 245 5e-63 gi|312139503|ref|YP_004006839.1| peptidyl prolyl isomerase [Rhod... 245 6e-63 gi|229491962|ref|ZP_04385779.1| putative peptidyl-prolyl cis-tra... 239 3e-61 gi|226366290|ref|YP_002784073.1| peptidyl-prolyl cis-trans isome... 238 1e-60 gi|226306420|ref|YP_002766380.1| peptidyl-prolyl cis-trans isome... 236 5e-60 gi|342858593|ref|ZP_08715248.1| PknE [Mycobacterium colombiense ... 231 8e-59 gi|111023854|ref|YP_706826.1| peptidylprolyl isomerase B [Rhodoc... 231 1e-58 gi|118462481|ref|YP_882645.1| protein kinase/peptidyl-prolyl cis... 229 3e-58 gi|25028321|ref|NP_738375.1| putative peptidylprolyl isomerase [... 229 4e-58 gi|254775910|ref|ZP_05217426.1| PknE [Mycobacterium avium subsp.... 229 4e-58 gi|259507376|ref|ZP_05750276.1| peptidyl-prolyl cis-trans isomer... 229 5e-58 gi|41407147|ref|NP_959983.1| PknE [Mycobacterium avium subsp. pa... 228 7e-58 gi|145295770|ref|YP_001138591.1| hypothetical protein cgR_1696 [... 223 4e-56 gi|19552861|ref|NP_600863.1| peptidyl-prolyl cis-trans isomerase... 220 2e-55 gi|324999167|ref|ZP_08120279.1| peptidyl-prolyl cis-trans isomer... 215 6e-54 gi|333919492|ref|YP_004493073.1| peptidyl-prolyl cis-trans isome... 215 8e-54 gi|226306419|ref|YP_002766379.1| peptidyl-prolyl cis-trans isome... 205 7e-51 gi|227833230|ref|YP_002834937.1| peptidyl-prolyl cis-trans isome... 205 9e-51 gi|227488796|ref|ZP_03919112.1| peptidylprolyl isomerase [Coryne... 201 9e-50 gi|227542207|ref|ZP_03972256.1| peptidylprolyl isomerase [Coryne... 197 1e-48 >gi|15609719|ref|NP_217098.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium tuberculosis H37Rv] gi|15842121|ref|NP_337158.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium tuberculosis CDC1551] gi|148662421|ref|YP_001283944.1| putative peptidyl-prolyl cis-trans isomerase B [Mycobacterium tuberculosis H37Ra] 45 more sequence titles Length=308 Score = 626 bits (1614), Expect = 2e-177, Method: Compositional matrix adjust. Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV Sbjct 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 Query 61 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD Sbjct 61 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 Query 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT Sbjct 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 Query 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM Sbjct 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 Query 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV 300 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV Sbjct 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV 300 Query 301 TITSVLLD 308 TITSVLLD Sbjct 301 TITSVLLD 308 >gi|306789983|ref|ZP_07428305.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu004] gi|306804341|ref|ZP_07441009.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu008] gi|308333593|gb|EFP22444.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu004] gi|308349093|gb|EFP37944.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu008] Length=308 Score = 625 bits (1612), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV Sbjct 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 Query 61 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD Sbjct 61 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 Query 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT Sbjct 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 Query 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM Sbjct 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 Query 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV 300 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGV+GGGEDGKPATEV Sbjct 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVSGGGEDGKPATEV 300 Query 301 TITSVLLD 308 TITSVLLD Sbjct 301 TITSVLLD 308 >gi|31793766|ref|NP_856259.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium bovis AF2122/97] gi|121638467|ref|YP_978691.1| putative peptidyl-prolyl cis-trans isomerase B ppiB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990961|ref|YP_002645648.1| putative peptidyl-prolyl cis-trans isomerase B [Mycobacterium bovis BCG str. Tokyo 172] gi|31619360|emb|CAD94798.1| PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PPIB (CYCLOPHILIN) (PPIASE) (ROTAMASE) (PEPTIDYLPROLYL ISOMERASE) [Mycobacterium bovis AF2122/97] gi|121494115|emb|CAL72593.1| Probable peptidyl-prolyl cis-trans isomerase B ppiB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774074|dbj|BAH26880.1| putative peptidyl-prolyl cis-trans isomerase B [Mycobacterium bovis BCG str. Tokyo 172] gi|341602505|emb|CCC65181.1| probable peptidyl-prolyl cis-trans isomerase B ppiB [Mycobacterium bovis BCG str. Moreau RDJ] Length=308 Score = 624 bits (1609), Expect = 5e-177, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 307/308 (99%), Gaps = 0/308 (0%) Query 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV Sbjct 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 Query 61 IVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 IVAVV TVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD Sbjct 61 IVAVVFTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPD 120 Query 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT Sbjct 121 KAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGT 180 Query 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM Sbjct 181 TCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAM 240 Query 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV 300 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV Sbjct 241 ANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEV 300 Query 301 TITSVLLD 308 TITSVLLD Sbjct 301 TITSVLLD 308 >gi|308405438|ref|ZP_07494381.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu012] gi|308365221|gb|EFP54072.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu012] gi|323718855|gb|EGB28011.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis CDC1551A] gi|339295460|gb|AEJ47571.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium tuberculosis CCDC5079] gi|339299078|gb|AEJ51188.1| peptidyl-prolyl cis-trans isomerase B [Mycobacterium tuberculosis CCDC5180] Length=292 Score = 591 bits (1523), Expect = 5e-167, Method: Compositional matrix adjust. Identities = 291/292 (99%), Positives = 292/292 (100%), Gaps = 0/292 (0%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ Sbjct 1 MPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 60 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT 136 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT Sbjct 61 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT 120 Query 137 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC 196 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC Sbjct 121 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC 180 Query 197 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY 256 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY Sbjct 181 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY 240 Query 257 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD Sbjct 241 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 292 >gi|308369760|ref|ZP_07418957.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu002] gi|308378404|ref|ZP_07482482.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu009] gi|308326554|gb|EFP15405.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu002] gi|308352630|gb|EFP41481.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu009] Length=292 Score = 590 bits (1521), Expect = 1e-166, Method: Compositional matrix adjust. Identities = 290/292 (99%), Positives = 292/292 (100%), Gaps = 0/292 (0%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ Sbjct 1 MPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 60 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT 136 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT Sbjct 61 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT 120 Query 137 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC 196 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC Sbjct 121 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC 180 Query 197 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY 256 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY Sbjct 181 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY 240 Query 257 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGV+GGGEDGKPATEVTITSVLLD Sbjct 241 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVSGGGEDGKPATEVTITSVLLD 292 >gi|289746374|ref|ZP_06505752.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis 02_1987] gi|289686902|gb|EFD54390.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis 02_1987] Length=294 Score = 550 bits (1416), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%) Query 38 RAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATA 97 RAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATA Sbjct 24 RAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATA 83 Query 98 PPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLA 157 PPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLA Sbjct 84 PPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLA 143 Query 158 NNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPT 217 NNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPT Sbjct 144 NNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPT 203 Query 218 DQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLT 277 DQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLT Sbjct 204 DQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLT 263 Query 278 TLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 TLDKIAKAGVAGGGEDGKPATEVTITSVLLD Sbjct 264 TLDKIAKAGVAGGGEDGKPATEVTITSVLLD 294 >gi|308232181|ref|ZP_07415193.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu001] gi|308379248|ref|ZP_07485631.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu010] gi|308380408|ref|ZP_07489851.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu011] gi|308214782|gb|EFO74181.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu001] gi|308357661|gb|EFP46512.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu010] gi|308361602|gb|EFP50453.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu011] Length=251 Score = 509 bits (1311), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 250/251 (99%), Positives = 251/251 (100%), Gaps = 0/251 (0%) Query 58 VAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP 117 +AVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP Sbjct 1 MAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP 60 Query 118 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF 177 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF Sbjct 61 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF 120 Query 178 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT 237 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT Sbjct 121 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT 180 Query 238 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPA 297 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPA Sbjct 181 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPA 240 Query 298 TEVTITSVLLD 308 TEVTITSVLLD Sbjct 241 TEVTITSVLLD 251 >gi|308371062|ref|ZP_07423705.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu003] gi|308373450|ref|ZP_07432366.2| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu005] gi|308329976|gb|EFP18827.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu003] gi|308337620|gb|EFP26471.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu005] Length=251 Score = 508 bits (1307), Expect = 6e-142, Method: Compositional matrix adjust. Identities = 249/251 (99%), Positives = 251/251 (100%), Gaps = 0/251 (0%) Query 58 VAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP 117 +AVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP Sbjct 1 MAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPP 60 Query 118 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF 177 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF Sbjct 61 SPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFF 120 Query 178 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT 237 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT Sbjct 121 KGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGT 180 Query 238 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPA 297 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGV+GGGEDGKPA Sbjct 181 LAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVSGGGEDGKPA 240 Query 298 TEVTITSVLLD 308 TEVTITSVLLD Sbjct 241 TEVTITSVLLD 251 >gi|308375546|ref|ZP_07668054.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu007] gi|308345941|gb|EFP34792.1| peptidyl-prolyl-cis-trans-isomerase B ppiB [Mycobacterium tuberculosis SUMu007] Length=328 Score = 463 bits (1191), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 225/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%) Query 81 ATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQ 140 + PTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQ Sbjct 101 SNPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQ 160 Query 141 VSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPK 200 VSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPK Sbjct 161 VSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPK 220 Query 201 GDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSK 260 GDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSK Sbjct 221 GDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSK 280 Query 261 LPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 LPPQYTVFGTIQADGLTTLDKIAKAGV+GGGEDGKPATEVTITSVLLD Sbjct 281 LPPQYTVFGTIQADGLTTLDKIAKAGVSGGGEDGKPATEVTITSVLLD 328 >gi|41407148|ref|NP_959984.1| PpiB [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395499|gb|AAS03367.1| PpiB [Mycobacterium avium subsp. paratuberculosis K-10] Length=313 Score = 444 bits (1141), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 228/297 (77%), Positives = 253/297 (86%), Gaps = 3/297 (1%) Query 15 AFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDD 74 A VPTN QRRA AKRKLERQLERRAKQA+ RRIL I GS+ AVAVI AVVVTV+ N+++ Sbjct 17 AAVPTNEQRRANAKRKLERQLERRAKQARTRRILLIAAGSIVAVAVIAAVVVTVLNNRNE 76 Query 75 HQSTTSATPTDSA---STSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRT 131 H+++T+A T ++ +T+P Q + PPLPPFKPSA++GANCQYPPSP+ A K VK PRT Sbjct 77 HKASTAAPSTSTSAPETTTPGQPSQVPPLPPFKPSADVGANCQYPPSPEPAAKQVKPPRT 136 Query 132 GKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPML 191 GKVPTDPAQVS SMVTNQG+IGLMLANNESPCTVNSF SL Q +F T CHRLTTSP L Sbjct 137 GKVPTDPAQVSASMVTNQGHIGLMLANNESPCTVNSFASLIGQKYFDNTKCHRLTTSPSL 196 Query 192 AVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQ 251 VLQCGDPKG+GTGGPGYQFANEYPTDQY NDPK +PV+YPRGTLAMANAGP TN SQ Sbjct 197 GVLQCGDPKGEGTGGPGYQFANEYPTDQYPPNDPKAQQPVLYPRGTLAMANAGPGTNGSQ 256 Query 252 FFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 FFMVY+DS+LPPQYTVFG IQ DGL TLDKIAKAGVAGGGEDG PATEVTITSVLLD Sbjct 257 FFMVYKDSQLPPQYTVFGKIQDDGLATLDKIAKAGVAGGGEDGAPATEVTITSVLLD 313 >gi|336461522|gb|EGO40390.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Mycobacterium avium subsp. paratuberculosis S397] Length=295 Score = 442 bits (1136), Expect = 4e-122, Method: Compositional matrix adjust. Identities = 226/295 (77%), Positives = 252/295 (86%), Gaps = 3/295 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRA AKRKLERQLERRAKQA+ RRIL I GS+ AVAVI AVVVTV+ N+++H+ Sbjct 1 MPTNEQRRANAKRKLERQLERRAKQARTRRILLIAAGSIVAVAVIAAVVVTVLNNRNEHK 60 Query 77 STTSATPTDSA---STSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGK 133 ++T+A T ++ +T+P Q + PPLPPFKPSA++GANCQYPPSP+ A K VK PRTGK Sbjct 61 ASTAAPSTSTSAPETTTPGQPSQVPPLPPFKPSADVGANCQYPPSPEPAAKQVKPPRTGK 120 Query 134 VPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 VPTDPAQVS SMVTNQG+IGLMLANNESPCTVNSF SL Q +F T CHRLTTSP L V Sbjct 121 VPTDPAQVSASMVTNQGHIGLMLANNESPCTVNSFASLIGQKYFDNTKCHRLTTSPSLGV 180 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFF 253 LQCGDPKG+GTGGPGYQFANEYPTDQY NDPK +PV+YPRGTLAMANAGP TN SQFF Sbjct 181 LQCGDPKGEGTGGPGYQFANEYPTDQYPPNDPKAQQPVLYPRGTLAMANAGPGTNGSQFF 240 Query 254 MVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 MVY+DS+LPPQYTVFG IQ DGL TLDKIAKAGVAGGGEDG PATEVTITSVLLD Sbjct 241 MVYKDSQLPPQYTVFGKIQDDGLATLDKIAKAGVAGGGEDGAPATEVTITSVLLD 295 >gi|118464361|ref|YP_882644.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium avium 104] gi|254775909|ref|ZP_05217425.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium avium subsp. avium ATCC 25291] gi|118165648|gb|ABK66545.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium avium 104] Length=295 Score = 438 bits (1126), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 225/295 (77%), Positives = 250/295 (85%), Gaps = 3/295 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRA AKRKLERQLERRAKQA+ RRIL I GS+ AVAVI AVVVTV+ N+ +H+ Sbjct 1 MPTNEQRRANAKRKLERQLERRAKQARTRRILLIAAGSIVAVAVIAAVVVTVLNNRHEHK 60 Query 77 STTSATPTDSA---STSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGK 133 ++T+A T ++ +T+P Q + PPLPPFKPSA++GANCQYPPSP+ A K VK PRTGK Sbjct 61 ASTAAPSTSTSAPETTTPGQPSQVPPLPPFKPSADVGANCQYPPSPEPAAKQVKPPRTGK 120 Query 134 VPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 VPTDPAQVS SMVTNQG+IGLMLANNESPCTVNSF SL Q +F T CHRLTTSP L V Sbjct 121 VPTDPAQVSASMVTNQGHIGLMLANNESPCTVNSFASLIGQKYFDNTKCHRLTTSPSLGV 180 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFF 253 LQCGDPKG+GTGGPGYQFANEYPTDQY NDPK +PV+YPRGTLAMANA P TN SQFF Sbjct 181 LQCGDPKGEGTGGPGYQFANEYPTDQYPPNDPKAQQPVLYPRGTLAMANARPGTNGSQFF 240 Query 254 MVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 MVY+DS+LPPQYTVFG IQ DGL TLDKIAKAGVAGGGEDG PATEVTITSVLLD Sbjct 241 MVYKDSQLPPQYTVFGKIQDDGLATLDKIAKAGVAGGGEDGAPATEVTITSVLLD 295 >gi|118617354|ref|YP_905686.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium ulcerans Agy99] gi|118569464|gb|ABL04215.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium ulcerans Agy99] Length=325 Score = 421 bits (1082), Expect = 8e-116, Method: Compositional matrix adjust. Identities = 248/325 (77%), Positives = 267/325 (83%), Gaps = 17/325 (5%) Query 1 MGHLTPVAAPRLACA--------------FVPTNAQRRATAKRKLERQLERRAKQAKRRR 46 MG LT V+A LA A VPTN QRRATAKRKLERQLERRAKQAKRRR Sbjct 1 MGCLTRVSALTLAWAGHSARFTGQAGRTSAVPTNQQRRATAKRKLERQLERRAKQAKRRR 60 Query 47 ILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSP---PQAATAPPLPPF 103 IL IVG ++AAVAVI AVVV VV+NK DH++T SA+P+ S TS P + PPLP F Sbjct 61 ILMIVGSAVAAVAVIAAVVVVVVINKGDHKTTASASPSSSEPTSSAAAPADDSVPPLPAF 120 Query 104 KPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPC 163 KPSANLGANCQYP SPDKA KP K PR+GKVPT+PAQVS SM+T+QG +GLMLANNESPC Sbjct 121 KPSANLGANCQYPASPDKAAKPAKPPRSGKVPTEPAQVSASMMTSQGKVGLMLANNESPC 180 Query 164 TVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSAN 223 TVNSF SLAQQGFFK T CHRLTTSP L+VLQCGDPKGDGTGGPGYQFANEYPTDQY N Sbjct 181 TVNSFASLAQQGFFKDTKCHRLTTSPTLSVLQCGDPKGDGTGGPGYQFANEYPTDQYPPN 240 Query 224 DPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIA 283 DP L +PVIYPRGTLAMANAGP+TNSSQFFMVYRDS+LPPQYTVFGTIQADGL TLDKIA Sbjct 241 DPALRQPVIYPRGTLAMANAGPDTNSSQFFMVYRDSQLPPQYTVFGTIQADGLETLDKIA 300 Query 284 KAGVAGGGEDGKPATEVTITSVLLD 308 KAGVAGGGEDG PA +VTI SV LD Sbjct 301 KAGVAGGGEDGPPALDVTIKSVFLD 325 >gi|183982139|ref|YP_001850430.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium marinum M] gi|183175465|gb|ACC40575.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium marinum M] Length=295 Score = 417 bits (1072), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 238/295 (81%), Positives = 257/295 (88%), Gaps = 3/295 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRATAKRKLERQLERRAKQAKRRRIL IVG ++AAVAVI AVVV VV+NK DH+ Sbjct 1 MPTNQQRRATAKRKLERQLERRAKQAKRRRILMIVGSAVAAVAVIAAVVVVVVINKGDHK 60 Query 77 STTSATPTDSASTSP---PQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGK 133 +T SA+P+ S TS P + PPLP FKPSANLGANCQYP SPDKA KP K PR+GK Sbjct 61 TTASASPSSSEPTSSAAAPADDSVPPLPAFKPSANLGANCQYPASPDKAAKPAKPPRSGK 120 Query 134 VPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 VPT+PAQVS SM+T+QG +GLMLANNESPCTVNSF SLAQQGFFK T CHRLTTSP L+V Sbjct 121 VPTEPAQVSASMMTSQGKVGLMLANNESPCTVNSFASLAQQGFFKDTKCHRLTTSPTLSV 180 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFF 253 LQCGDPKGDGTGGPGYQFANEYPTDQY NDP L +PVIYPRGTLAMANAGP+TNSSQFF Sbjct 181 LQCGDPKGDGTGGPGYQFANEYPTDQYPPNDPALRQPVIYPRGTLAMANAGPDTNSSQFF 240 Query 254 MVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 MVYRDS+LPPQYTVFGTIQADGL TLDKIAKAGVAGGGEDG PA +VTI SV LD Sbjct 241 MVYRDSQLPPQYTVFGTIQADGLETLDKIAKAGVAGGGEDGPPALDVTIKSVFLD 295 >gi|254820461|ref|ZP_05225462.1| PpiB [Mycobacterium intracellulare ATCC 13950] Length=296 Score = 412 bits (1058), Expect = 4e-113, Method: Compositional matrix adjust. Identities = 225/296 (77%), Positives = 244/296 (83%), Gaps = 4/296 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRA AKRKLERQLERRAKQAK RRI+ I GS+ AVAV+VAVV+T+V K +H+ Sbjct 1 MPTNEQRRANAKRKLERQLERRAKQAKTRRIVLIAAGSIVAVAVVVAVVLTIVNTKHEHK 60 Query 77 STTSATPTDSASTSPPQAATAPPLPP----FKPSANLGANCQYPPSPDKAVKPVKLPRTG 132 S T+AT T S+S A P P FKPSA +GANCQYP +P+ A K VK PRTG Sbjct 61 SNTAATTTSSSSPESTTPAGPAPSAPPLPAFKPSAEVGANCQYPATPEPAAKQVKPPRTG 120 Query 133 KVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLA 192 KVPTDPAQVSVSMVTNQG+IGLMLANNESPCTVNSF SL Q +F T CHRLTTSP L Sbjct 121 KVPTDPAQVSVSMVTNQGHIGLMLANNESPCTVNSFASLVGQKYFDNTKCHRLTTSPGLG 180 Query 193 VLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQF 252 VLQCGDPKG+GTGGPGYQFANEYPTDQY NDPK EPV+YPRGTLAMANAGP TN SQF Sbjct 181 VLQCGDPKGEGTGGPGYQFANEYPTDQYPPNDPKAQEPVLYPRGTLAMANAGPGTNGSQF 240 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 FMVY+DS+LPPQYTVFGTIQ DGL TLDKIAKAGVAGGGEDG PATEVTITSVLLD Sbjct 241 FMVYKDSQLPPQYTVFGTIQPDGLATLDKIAKAGVAGGGEDGAPATEVTITSVLLD 296 >gi|240171982|ref|ZP_04750641.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium kansasii ATCC 12478] Length=299 Score = 410 bits (1054), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 235/299 (79%), Positives = 252/299 (85%), Gaps = 7/299 (2%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRATAKRKLERQLERRAKQAKRRRI TI G S+ AVAV+ AVV V VNKDDH+ Sbjct 1 MPTNQQRRATAKRKLERQLERRAKQAKRRRIATIAGASVVAVAVVAAVVYVVFVNKDDHK 60 Query 77 STTSATPTDSASTS-------PPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLP 129 TTSA+P+ SA S P Q A P+P FK ANLGANCQYPPSPDKA K K P Sbjct 61 GTTSASPSSSAPGSPSATGLPPVQLGNAVPMPAFKAPANLGANCQYPPSPDKAAKEAKPP 120 Query 130 RTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSP 189 RTGKVPT+PAQ+S SMVT+QG IGLMLANNESPCTVNSF SLAQQGFFK T CHRLTTSP Sbjct 121 RTGKVPTEPAQISASMVTSQGKIGLMLANNESPCTVNSFASLAQQGFFKDTKCHRLTTSP 180 Query 190 MLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNS 249 L+VLQCGDPKGDGTGGPGYQFANEYPT+QY NDPKL EPVIYPRGTLAMANAGP+TNS Sbjct 181 SLSVLQCGDPKGDGTGGPGYQFANEYPTNQYPPNDPKLKEPVIYPRGTLAMANAGPDTNS 240 Query 250 SQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 SQFFMVYRDS LPP+YTVFGTIQADGL TLDKIA+AGVAGGGEDG PA +V I S+LLD Sbjct 241 SQFFMVYRDSALPPEYTVFGTIQADGLATLDKIAEAGVAGGGEDGPPALDVVIKSLLLD 299 >gi|15827168|ref|NP_301431.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae TN] gi|221229646|ref|YP_002503062.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae Br4923] gi|1169180|sp|P46697.1|PPIB_MYCLE RecName: Full=Probable peptidyl-prolyl cis-trans isomerase B; Short=PPIase B; AltName: Full=Rotamase B gi|466838|gb|AAA17113.1| cypH [Mycobacterium leprae] gi|3136013|emb|CAA19085.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae] gi|13092716|emb|CAC30000.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae] gi|219932753|emb|CAR70585.1| putative peptidyl-prolyl cis-trans isomerase [Mycobacterium leprae Br4923] Length=295 Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 211/295 (72%), Positives = 238/295 (81%), Gaps = 3/295 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRATAKRKL+RQLERRAKQA+ RR+L I GG + AVAVI+ VV TVV++K H+ Sbjct 1 MPTNEQRRATAKRKLKRQLERRAKQARWRRVLLISGGVVVAVAVIITVVATVVISKLGHK 60 Query 77 STTSATPTDSASTSPPQAATAP---PLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGK 133 T+++ ++ T+ A P PLP F+PS NLG NCQYPPS DKA KPVK PR GK Sbjct 61 HDTASSTASNSLTATKTPAVTPSVLPLPSFQPSTNLGVNCQYPPSADKAAKPVKPPRAGK 120 Query 134 VPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 VPTDPA VS SM TNQGNIGL+L N ESPCTVNSF SL QGFF T CHRLTTS ML V Sbjct 121 VPTDPATVSASMATNQGNIGLLLNNAESPCTVNSFASLTGQGFFNNTKCHRLTTSLMLGV 180 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFF 253 LQCGDPK DGTGGPGY+FANEYPTDQY NDPKL +PV+YPRGTLAMAN+GPNTN SQFF Sbjct 181 LQCGDPKVDGTGGPGYKFANEYPTDQYPPNDPKLKQPVLYPRGTLAMANSGPNTNGSQFF 240 Query 254 MVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 +VY DS+LPP+YTVFGTIQADGL TLDKIAK G+A GG+DG PATEVTI S+ LD Sbjct 241 LVYHDSQLPPEYTVFGTIQADGLATLDKIAKGGIASGGDDGPPATEVTIESLRLD 295 >gi|296170821|ref|ZP_06852389.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894526|gb|EFG74265.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=299 Score = 405 bits (1042), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 224/299 (75%), Positives = 246/299 (83%), Gaps = 7/299 (2%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRA AKRKLERQLERRAKQAK RRI+ I G++ AVAV+VAV + VV NK +H+ Sbjct 1 MPTNEQRRANAKRKLERQLERRAKQAKTRRIVLIAAGAIVAVAVVVAVALAVVNNKHEHK 60 Query 77 STTSATPTDSASTSPPQAATAPPLPP-------FKPSANLGANCQYPPSPDKAVKPVKLP 129 S T+A+ T SA+T P++ T P FKPSA+LGANCQYP SP+ A KPVK P Sbjct 61 SNTAASTTSSAATGSPESTTPAGPTPPVPPLPAFKPSADLGANCQYPASPEPAAKPVKPP 120 Query 130 RTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSP 189 RTGKVPTDPAQVS SMVTNQG IGLMLANNESPCTVNSF SL Q +F T CHRLTTS Sbjct 121 RTGKVPTDPAQVSASMVTNQGRIGLMLANNESPCTVNSFASLIGQKYFDNTKCHRLTTSA 180 Query 190 MLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNS 249 L VLQCGDPKGDGTGGPGYQFANEYPTDQY NDPK +PV+YPRGTLAMANAGP TN Sbjct 181 DLGVLQCGDPKGDGTGGPGYQFANEYPTDQYPPNDPKAQQPVLYPRGTLAMANAGPGTNG 240 Query 250 SQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 SQFFMVY+DS+LPPQYTVFGTIQADGL TLDKIAKAGVAGGGEDG PA+EVTITS+LLD Sbjct 241 SQFFMVYKDSQLPPQYTVFGTIQADGLATLDKIAKAGVAGGGEDGAPASEVTITSLLLD 299 >gi|342858594|ref|ZP_08715249.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium colombiense CECT 3035] gi|342134298|gb|EGT87478.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium colombiense CECT 3035] Length=297 Score = 390 bits (1003), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 225/297 (76%), Positives = 246/297 (83%), Gaps = 5/297 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNK-DDH 75 +PTN QRRA AKRKLERQLERRAKQAK RRI+ I GS+ AVAVI AVV+T+V K DDH Sbjct 1 MPTNEQRRANAKRKLERQLERRAKQAKTRRIVLIAAGSIVAVAVIAAVVITIVNTKHDDH 60 Query 76 QSTTSATPTDSA----STSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRT 131 +S T+A+ T S+ +T+P Q PLPPFKPSA +GANCQYP SP+ A K VK PRT Sbjct 61 KSNTAASTTASSSAPETTAPGQPGQTAPLPPFKPSAEVGANCQYPASPEPAAKQVKPPRT 120 Query 132 GKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPML 191 GKVPTDPAQVSVSMVTNQG+IGLMLANNESPCTVNSF SLA Q +F T CHRLTTS L Sbjct 121 GKVPTDPAQVSVSMVTNQGHIGLMLANNESPCTVNSFASLAGQKYFDNTKCHRLTTSQGL 180 Query 192 AVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQ 251 VLQCGDPKG+GTGGPGYQFANEYPTDQ+ NDPK EPV+YPRGTLAMANAGP TN SQ Sbjct 181 GVLQCGDPKGEGTGGPGYQFANEYPTDQFPPNDPKAQEPVVYPRGTLAMANAGPGTNGSQ 240 Query 252 FFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 FF+VY+DS+LPPQYTVFGTIQ DGL TLDKIAK GVAGGGEDG PAT VTITSV LD Sbjct 241 FFLVYKDSQLPPQYTVFGTIQPDGLATLDKIAKGGVAGGGEDGAPATAVTITSVQLD 297 >gi|333991009|ref|YP_004523623.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium sp. JDM601] gi|333486977|gb|AEF36369.1| peptidyl-prolyl cis-trans isomerase B PpiB [Mycobacterium sp. JDM601] Length=291 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 181/291 (63%), Positives = 220/291 (76%), Gaps = 3/291 (1%) Query 19 TNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQST 78 TN +RRA AKRKL+ Q+++RA+ A+++R + ++ G++ AVA++ VV VV+ D Sbjct 3 TNEERRAQAKRKLDEQVQQRAEAARKQRRILMIAGAVVAVALLAGVVF-VVLRDDGDTGN 61 Query 79 TSATPTDSASTSPPQAATAP-PLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTD 137 +A PT S +P + P LP F S LGA+CQYP + A KPV+ PR+GKVPT+ Sbjct 62 INALPTSETSDAPAPSPGEPGQLPKFTASPTLGADCQYPKA-RPASKPVEPPRSGKVPTE 120 Query 138 PAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCG 197 PA+VSVSM+T+QG IGLML N +SPCTVNSF+SL + FF T CHRLTTSPML+VLQCG Sbjct 121 PAEVSVSMMTDQGPIGLMLDNAQSPCTVNSFISLGAKDFFADTQCHRLTTSPMLSVLQCG 180 Query 198 DPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYR 257 DP GDGTGGPGY+FANEYPTDQY+ NDP +PV YPRGTLAMANAGP TN SQFF+VY+ Sbjct 181 DPAGDGTGGPGYEFANEYPTDQYAPNDPAAQQPVRYPRGTLAMANAGPGTNGSQFFLVYQ 240 Query 258 DSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 DS LPPQYTVFGTIQ DGL TLDKIA GV GGG DG PAT+VTI S+ D Sbjct 241 DSMLPPQYTVFGTIQQDGLDTLDKIAAGGVQGGGTDGPPATKVTIKSIRAD 291 >gi|315444725|ref|YP_004077604.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Mycobacterium sp. Spyr1] gi|315263028|gb|ADT99769.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Mycobacterium sp. Spyr1] Length=295 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 190/296 (65%), Positives = 223/296 (76%), Gaps = 5/296 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVV-NKDDH 75 +PTN QRRATAKRKLERQLE RA++ ++RR TI+G ++ V V+ AVV T+V+ N+D Sbjct 1 MPTNEQRRATAKRKLERQLEHRAERERKRRQYTIIGSAVGGVLVVAAVVATIVLVNRDSG 60 Query 76 QSTTSATPTDSASTSP---PQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTG 132 T SA+ + + ++SP P A A LP F LG NCQYP + + A KP PRTG Sbjct 61 TETASASTSTTETSSPFDVPPPAEAGTLPEFVAPEGLGGNCQYPEA-EPASKPNNAPRTG 119 Query 133 KVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLA 192 KVPT+PAQVS SM T+QGNIGL L N +SPCTVNSF SLAQQG+F T CHRLTTS L Sbjct 120 KVPTEPAQVSASMETDQGNIGLQLDNGKSPCTVNSFASLAQQGYFANTPCHRLTTSDSLG 179 Query 193 VLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQF 252 VLQCGDP G+GTGGPGYQF NEYPTDQY +DPKL EPV+YPRGTLAMANAGP TN SQF Sbjct 180 VLQCGDPTGEGTGGPGYQFDNEYPTDQYQPDDPKLGEPVVYPRGTLAMANAGPGTNGSQF 239 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 F+VY+DS+LPPQYTVFGTI GL TLDKIA+AGV GGG DG P VT+ ++ LD Sbjct 240 FLVYKDSQLPPQYTVFGTIDETGLETLDKIAEAGVDGGGPDGAPKLPVTVKNIQLD 295 >gi|108799250|ref|YP_639447.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. MCS] gi|119868366|ref|YP_938318.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. KMS] gi|126434908|ref|YP_001070599.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. JLS] gi|108769669|gb|ABG08391.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. MCS] gi|119694455|gb|ABL91528.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. KMS] gi|126234708|gb|ABN98108.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. JLS] Length=335 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 196/296 (67%), Positives = 232/296 (79%), Gaps = 4/296 (1%) Query 15 AFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDD 74 A VPTN QRR AKRKLERQLERRA++A++RRI TI G ++AAV VI A+V T+V+ K D Sbjct 42 AAVPTNEQRREAAKRKLERQLERRAEKARKRRIATIAGSAVAAVVVIGAIVATIVLTKSD 101 Query 75 HQSTTSA--TPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTG 132 TT++ TPT + S +P Q A LP F P A LGA+CQYP S A KPV+ PRTG Sbjct 102 SSDTTASAQTPTPT-SGAPAQPAADGGLPAFAPPAGLGADCQYPAS-GAASKPVEPPRTG 159 Query 133 KVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLA 192 +VPTDPA+VSVSM TNQGN+GL+L N ++PCTVNSF SLAQQG+F T CHRLTT+P L+ Sbjct 160 QVPTDPAEVSVSMSTNQGNLGLLLDNAKAPCTVNSFASLAQQGYFNDTPCHRLTTTPSLS 219 Query 193 VLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQF 252 VLQCGDP G+GTGGPGY+FANEYPT+QY +DP L E V+YPRGT+AMANAGPNTN SQF Sbjct 220 VLQCGDPTGEGTGGPGYKFANEYPTNQYQPDDPALGEAVLYPRGTIAMANAGPNTNGSQF 279 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 F+VY+DS+LPP YTVFG I GL TLDKIA AGV GGG DG PA EV + ++LLD Sbjct 280 FLVYKDSQLPPGYTVFGRIDDTGLATLDKIAAAGVQGGGPDGAPAEEVQVKTILLD 335 >gi|145224393|ref|YP_001135071.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium gilvum PYR-GCK] gi|145216879|gb|ABP46283.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium gilvum PYR-GCK] Length=295 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 190/296 (65%), Positives = 223/296 (76%), Gaps = 5/296 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVV-NKDDH 75 +PTN QRRATAKRKLERQLE RA++ ++RR TI+G ++ V V+ AVV T+V+ N+D Sbjct 1 MPTNEQRRATAKRKLERQLEHRAERERKRRQYTIIGSAVGGVLVVAAVVATIVLVNRDSG 60 Query 76 QSTTSATPTDSASTSP---PQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTG 132 T SA+ + + ++SP P A A LP F LG NCQYP + + A KP PRTG Sbjct 61 TETASASTSTTETSSPFDVPPPAEAVTLPEFVAPEGLGGNCQYPEA-EPASKPNNAPRTG 119 Query 133 KVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLA 192 KVPT+PAQVS SM T+QGNIGL L N +SPCTVNSF SLAQQG+F T CHRLTTS L Sbjct 120 KVPTEPAQVSASMETDQGNIGLQLDNGKSPCTVNSFASLAQQGYFANTPCHRLTTSDSLG 179 Query 193 VLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQF 252 VLQCGDP G+GTGGPGYQF NEYPTDQY +DPKL EPV+YPRGTLAMANAGP TN SQF Sbjct 180 VLQCGDPTGEGTGGPGYQFDNEYPTDQYQPDDPKLGEPVVYPRGTLAMANAGPGTNGSQF 239 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 F+VY+DS+LPPQYTVFGTI GL TLDKIA+AGV GGG DG P VT+ ++ LD Sbjct 240 FLVYKDSQLPPQYTVFGTIDETGLETLDKIAEAGVDGGGPDGAPKLPVTVKNIQLD 295 >gi|169629958|ref|YP_001703607.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium abscessus ATCC 19977] gi|169241925|emb|CAM62953.1| Probable peptidyl-prolyl cis-trans isomerase [Mycobacterium abscessus] Length=307 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 177/313 (57%), Positives = 214/313 (69%), Gaps = 27/313 (8%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRR TAKRKLERQLE RA++A+++RI I G ++ AV V VA+ ++K D Sbjct 1 MPTNEQRRQTAKRKLERQLENRAERARKQRIWAISGVAVLAVVVAVAITAWFAISKGDKT 60 Query 77 STTSATPTDSASTSPPQAATAPP----------------LPPFKPSANLGANCQYPPSPD 120 T D+AST+P APP LP F PSA +GANCQY PS Sbjct 61 DTAH----DTASTTPVSTVDAPPTSSLPTPDEPPLAGPALPKFVPSAEVGANCQYRPS-G 115 Query 121 KAVKPV--KLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFK 178 KA K + ++PRTGK+PTDPA ++ SM T+QGNIGL+L N ++PCTVNSF SLAQ G+F Sbjct 116 KASKTIEKQIPRTGKIPTDPATLTASMKTSQGNIGLVLDNAKAPCTVNSFASLAQGGYFD 175 Query 179 GTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTL 238 T CHR+T S L+VLQCGDP G+GGPGY+F NEYPT QY A+DP + V+YP GTL Sbjct 176 NTVCHRMT-SGGLSVLQCGDPTATGSGGPGYEFDNEYPTTQYKADDPAAQQAVVYPAGTL 234 Query 239 AMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGV---AGGGEDGK 295 AMANAGP TN SQFFMVY+DSKLPPQYTVFGTI G+ TL KIAK G+ A G DG+ Sbjct 235 AMANAGPGTNGSQFFMVYKDSKLPPQYTVFGTIDKTGMDTLAKIAKNGIKPGARGAGDGE 294 Query 296 PATEVTITSVLLD 308 PA EV I + LD Sbjct 295 PAQEVKIIDLQLD 307 >gi|118468823|ref|YP_887293.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium smegmatis str. MC2 155] gi|118170110|gb|ABK71006.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium smegmatis str. MC2 155] Length=287 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 186/292 (64%), Positives = 221/292 (76%), Gaps = 5/292 (1%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +PTN QRRATAKRKLERQLERRA +A+++RILTI GS+ AV VI AV+ T+V+ D Sbjct 1 MPTNEQRRATAKRKLERQLERRAARARKQRILTI-AGSVVAVLVIGAVITTLVITDKDGG 59 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPT 136 T+A+ S+ + P A LPPF A+LGANCQYP + +A KPV+ PR+GKVPT Sbjct 60 GDTTASAATSSEAAEPAADGQ--LPPFVAPADLGANCQYPAA-GEASKPVEPPRSGKVPT 116 Query 137 DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQC 196 DPA +SVSMVT QGNIGL L N ++PCTVNSF SLA + +F T CHRLTT L+VLQC Sbjct 117 DPATISVSMVTTQGNIGLQLDNAKAPCTVNSFASLAAKDYFNDTPCHRLTTG-GLSVLQC 175 Query 197 GDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVY 256 GDP G GTGGPGYQFANEYPT+QY ++P L +PV+YPRGT+AMANAGP TN SQFF+VY Sbjct 176 GDPTGTGTGGPGYQFANEYPTNQYQPDNPALQQPVVYPRGTVAMANAGPGTNGSQFFLVY 235 Query 257 RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 +DS+LPP YTVFG I GL TLDKIA GV GGG DGKPA +V + SV LD Sbjct 236 QDSQLPPNYTVFGKIDETGLATLDKIAAGGVEGGGPDGKPALDVELKSVALD 287 >gi|120403573|ref|YP_953402.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium vanbaalenii PYR-1] gi|119956391|gb|ABM13396.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium vanbaalenii PYR-1] Length=318 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 191/312 (62%), Positives = 225/312 (73%), Gaps = 4/312 (1%) Query 1 MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAV 60 + H P + VPTN QRRATAKRKLERQLE RA++ ++RR+ TI+G ++AAV V Sbjct 7 LAHSVPTGSTARRTPAVPTNEQRRATAKRKLERQLENRAERERKRRLYTIIGSAVAAVVV 66 Query 61 IVAVVVTVVV-NKDDHQSTTSATPTDSASTSP---PQAATAPPLPPFKPSANLGANCQYP 116 I AVV T+V+ N+D T S + + ++SP P A LP F + LG++CQYP Sbjct 67 IAAVVATIVITNRDSGTQTASTATSTTQTSSPFDVPPPTEAGALPEFVAAEGLGSDCQYP 126 Query 117 PSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGF 176 S + A K PR+GKVPT+PA VS SM T+QGNIGL L N +SPCTVNSF SLAQQGF Sbjct 127 KSAEAASKSNNPPRSGKVPTEPALVSASMATDQGNIGLQLDNGKSPCTVNSFASLAQQGF 186 Query 177 FKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRG 236 F T CHRLTTS L VLQCGDP G+GTGGPGY+FANEYPTDQY +DP L PV+YPRG Sbjct 187 FNDTPCHRLTTSDSLGVLQCGDPTGEGTGGPGYEFANEYPTDQYQPDDPALGAPVVYPRG 246 Query 237 TLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKP 296 TLAMANAGP TN SQFF+VY+DS+LPPQYTVFGTI GL TLDKIA AGVAGGG DG P Sbjct 247 TLAMANAGPGTNGSQFFLVYKDSQLPPQYTVFGTIDETGLQTLDKIAAAGVAGGGPDGAP 306 Query 297 ATEVTITSVLLD 308 T+ S+ LD Sbjct 307 QLATTVKSIQLD 318 >gi|118469332|ref|YP_887292.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium smegmatis str. MC2 155] gi|118170619|gb|ABK71515.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium smegmatis str. MC2 155] Length=318 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 154/275 (56%), Positives = 186/275 (68%), Gaps = 6/275 (2%) Query 34 QLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQ 93 Q++R +Q + I +V + V +VAV+V++++ Q T P + PQ Sbjct 50 QIKRTGEQGRSLAIAGLVISYVFTVLTVVAVIVSILLTMAAVQ-TVDRRPGGPTYDAAPQ 108 Query 94 AATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIG 153 A LP F P NLG +CQYPP+ + A KP + PRTG VPT+PA VS + TN G+IG Sbjct 109 NA----LPAFDPPPNLGLDCQYPPTTEPAAKPARPPRTGTVPTEPATVSAGIRTNHGSIG 164 Query 154 LMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFAN 213 L LAN SPCTVNSF SLAQQGF+ T CHRL+T M AVLQCGDP G GTGGPGY+FAN Sbjct 165 LRLANGRSPCTVNSFASLAQQGFYDNTPCHRLSTGQM-AVLQCGDPTGKGTGGPGYRFAN 223 Query 214 EYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQA 273 EYPT+QY +DP L PV+YPRGT+A ANAGP +N SQFF+VY+DS LPP YTVFG + Sbjct 224 EYPTNQYRLSDPALRTPVVYPRGTVATANAGPGSNGSQFFLVYQDSPLPPTYTVFGEVDR 283 Query 274 DGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 GL TLD IA AGVA GG+DG PA VTIT LD Sbjct 284 TGLRTLDAIASAGVADGGDDGPPAEPVTITEASLD 318 >gi|108799249|ref|YP_639446.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. MCS] gi|119868365|ref|YP_938317.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. KMS] gi|108769668|gb|ABG08390.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. MCS] gi|119694454|gb|ABL91527.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. KMS] Length=320 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 141/224 (63%), Positives = 159/224 (71%), Gaps = 0/224 (0%) Query 85 DSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVS 144 D ST + LP F NLGANCQYP A PV PRTG+VPTDPA++S S Sbjct 97 DDGSTRSAAPPSGDRLPAFVAPRNLGANCQYPKGDLPAGAPVTPPRTGRVPTDPAKISAS 156 Query 145 MVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGT 204 + T+QGNIGL L N +SPCTVN+F SLAQQGFF TTCHRLTT+ L VLQCGDP G G Sbjct 157 VSTSQGNIGLELDNGKSPCTVNNFASLAQQGFFDDTTCHRLTTARSLKVLQCGDPTGTGA 216 Query 205 GGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQ 264 GGPGY+F NEYPT QY +DP L PV+YPRGTL MAN GP TN SQF +VY D+ LPP Sbjct 217 GGPGYRFPNEYPTSQYRLSDPGLRRPVVYPRGTLVMANTGPGTNGSQFMLVYGDTLLPPT 276 Query 265 YTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 YTVFGT+ + GL TLD+IA GVAGG +DGKPA EV I S LD Sbjct 277 YTVFGTVDSTGLATLDRIAARGVAGGADDGKPAAEVKIISARLD 320 >gi|126434907|ref|YP_001070598.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mycobacterium sp. JLS] gi|126234707|gb|ABN98107.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Mycobacterium sp. JLS] Length=320 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 141/224 (63%), Positives = 159/224 (71%), Gaps = 0/224 (0%) Query 85 DSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVS 144 D ST + LP F NLGANCQYP A PV PRTG+VPTDPA++S S Sbjct 97 DDGSTRSAAPPSGDRLPAFVAPRNLGANCQYPKGDLPAGAPVTPPRTGRVPTDPAKISAS 156 Query 145 MVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGT 204 + T+QGNIGL L N +SPCTVN+F SLAQQGFF TTCHRLTT+ L VLQCGDP G G Sbjct 157 VSTSQGNIGLELDNGKSPCTVNNFASLAQQGFFDDTTCHRLTTARSLNVLQCGDPTGTGA 216 Query 205 GGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQ 264 GGPGY+F NEYPT QY +DP L PV+YPRGTL MAN GP TN SQF +VY D+ LPP Sbjct 217 GGPGYRFPNEYPTSQYRLSDPGLRRPVVYPRGTLVMANTGPGTNGSQFMLVYGDTLLPPT 276 Query 265 YTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 YTVFGT+ + GL TLD+IA GVAGG +DGKPA EV I S LD Sbjct 277 YTVFGTVDSTGLATLDRIAARGVAGGADDGKPAAEVKIISARLD 320 >gi|54025635|ref|YP_119877.1| putative peptidyl-prolyl cis-trans isomerase [Nocardia farcinica IFM 10152] gi|54017143|dbj|BAD58513.1| putative peptidyl-prolyl cis-trans isomerase [Nocardia farcinica IFM 10152] Length=292 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 164/297 (56%), Positives = 192/297 (65%), Gaps = 12/297 (4%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 VP+N QRRA AKRKLERQL RA++A++R+ LTI G L V V A ++ K + Sbjct 3 VPSNEQRRAAAKRKLERQLANRAERARKRKRLTIAGSVLGVVVVAAAATGVYLLTKGEEP 62 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLP-RTGKVP 135 T +A+ T AS S A P P NC Y SP+ A KPV+ P +T +P Sbjct 63 DTAAASETPEASLSAAAPPAATPKPEL-------VNCTYTDSPEPAAKPVQKPTKTEGIP 115 Query 136 T--DPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 T A VSVS+ TNQG +GL L N ESPCTVNSFVSLA QGFF GT CHR+T L V Sbjct 116 TTGGDATVSVSVETNQGPLGLTLNNAESPCTVNSFVSLATQGFFDGTDCHRMTADATLKV 175 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFF 253 LQCGDP G G GGPGY F NEYPTDQY+ DP E + Y RGTLAMANAGP TN SQFF Sbjct 176 LQCGDPTGTGKGGPGYVFGNEYPTDQYAEGDPMAMEAIAYKRGTLAMANAGPGTNGSQFF 235 Query 254 MVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGV--AGGGEDGKPATEVTITSVLLD 308 +VY DS+LPPQYT+FGT+ + + TLDKIA G + G DGKP + VTI SV LD Sbjct 236 LVYGDSQLPPQYTIFGTVDENSMATLDKIAALGQDDSNGPGDGKPTSPVTIQSVRLD 292 >gi|296170826|ref|ZP_06852391.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894515|gb|EFG74255.1| peptidyl-prolyl cis-trans isomerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=315 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 144/275 (53%), Positives = 175/275 (64%), Gaps = 14/275 (5%) Query 43 KRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPP 102 RR +L IVG S A+A +VA+VV +V DD S SA PT P + P P Sbjct 40 SRRLLLGIVGASALALAAVVALVVALVTQNDD--SANSAAPTTPTRARVPGRPGSNPGPT 97 Query 103 FKPSA------------NLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQG 150 + + +LGANCQYP +PD VKPV P +G+V TDP Q+ ++ TN G Sbjct 98 DQATGTVPPLPAFAPPADLGANCQYPSAPDTIVKPVSPPPSGRVSTDPPQIPATLSTNFG 157 Query 151 NIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQ 210 +IG+ L N ESPCTVNSFVSLA+Q FF T C RL + L CG P+ DG+GGPGYQ Sbjct 158 DIGIQLTNYESPCTVNSFVSLAKQQFFDNTQCARLIDASDGGSLLCGGPESDGSGGPGYQ 217 Query 211 FANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGT 270 FA+EYPTDQY A DP L V+YPRGT+ MA GPNTN SQF +V+RDS+L PQ TVFGT Sbjct 218 FADEYPTDQYPAGDPALRATVMYPRGTVIMATDGPNTNGSQFSLVFRDSELAPQSTVFGT 277 Query 271 IQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSV 305 I GL LDKIA+AG+AG + G P VT+TSV Sbjct 278 ITQAGLAVLDKIAQAGIAGNRQSGAPTNPVTLTSV 312 >gi|312139503|ref|YP_004006839.1| peptidyl prolyl isomerase [Rhodococcus equi 103S] gi|325672607|ref|ZP_08152303.1| peptidyl-prolyl cis-trans isomerase B [Rhodococcus equi ATCC 33707] gi|311888842|emb|CBH48154.1| putative secreted peptidyl prolyl isomerase [Rhodococcus equi 103S] gi|325556484|gb|EGD26150.1| peptidyl-prolyl cis-trans isomerase B [Rhodococcus equi ATCC 33707] Length=286 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 168/298 (57%), Positives = 201/298 (68%), Gaps = 18/298 (6%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVN-KDDH 75 +P+N QRR AKRKLERQLERRA++A++R+ +TI G + A+ VI V V ++ KDD+ Sbjct 1 MPSNQQRREAAKRKLERQLERRAERARKRKQMTIAGSIVGAIVVIAVGAVVVTLSGKDDN 60 Query 76 QS-TTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKV 134 + TT+A+ T SA+ P A A PLP NL NC Y P+ + KP PR + Sbjct 61 STETTAASETPSAAAMP--AGRAEPLP------NL-VNCAYTPA-EAPAKPNNPPRAEGI 110 Query 135 PTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVL 194 T A VS SM T QG IGL L N ESPCTVNSFVSLA QG+F GTTCHRL T L VL Sbjct 111 DTTVATVSASMETTQGPIGLTLNNAESPCTVNSFVSLASQGYFDGTTCHRLVTGEGLQVL 170 Query 195 QCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM 254 QCGDP G G+GGPGYQFANE+PTDQY+ +D PV Y RGT+AMANAG TN SQFF+ Sbjct 171 QCGDPTGTGSGGPGYQFANEFPTDQYAPDDLAAQTPVTYKRGTIAMANAGAGTNGSQFFL 230 Query 255 VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAG----VAGGGEDGKPATEVTITSVLLD 308 VY DS LPPQYTVFGTI GL T++K+A AG ++ GG GKP + ITSV LD Sbjct 231 VYGDSTLPPQYTVFGTIDETGLQTIEKVAAAGDDGSMSAGG--GKPNLPIDITSVRLD 286 >gi|229491962|ref|ZP_04385779.1| putative peptidyl-prolyl cis-trans isomerase B [Rhodococcus erythropolis SK121] gi|229321094|gb|EEN86898.1| putative peptidyl-prolyl cis-trans isomerase B [Rhodococcus erythropolis SK121] Length=293 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 160/296 (55%), Positives = 193/296 (66%), Gaps = 7/296 (2%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVV-NKDDH 75 +P+N QRR AKRKLERQLERRA++A++R+ +TI G +L V V+ V + + N+ D Sbjct 1 MPSNEQRREAAKRKLERQLERRAERARKRKQMTIAGTALGVVVVVGVVGGLIWLSNRSDD 60 Query 76 QSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVP 135 + T+ T D +S +P Q A A P P A+ +C YP A K PRT +P Sbjct 61 DANTTNTAADDSSLTP-QTAGAMPAGLSTPLADT-VSCSYPADGATASKANNPPRTDGIP 118 Query 136 TD--PAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 T A S+S+ T+QGNIGL L +SPCTVNSFVSLAQQ +F TTCHR+TTSP L V Sbjct 119 TTAPDATPSISVETSQGNIGLTLDGTKSPCTVNSFVSLAQQDYFNDTTCHRMTTSPSLQV 178 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAG-PNTNSSQF 252 LQCGDP G GTGGPGY F NE+PT YS DP EPV Y RGT+AMAN G P +N SQF Sbjct 179 LQCGDPSGTGTGGPGYGFDNEFPTTAYSTTDPAAQEPVTYARGTVAMANTGAPGSNGSQF 238 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 F+VY DS+LPPQYTVFGTI GL TLDK+A G G DGKP I +V LD Sbjct 239 FLVYGDSQLPPQYTVFGTIDETGLATLDKVAAGGSTPEG-DGKPNLTTDIKTVRLD 293 >gi|226366290|ref|YP_002784073.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus opacus B4] gi|226244780|dbj|BAH55128.1| putative peptidyl-prolyl cis-trans isomerase [Rhodococcus opacus B4] Length=292 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 158/302 (53%), Positives = 193/302 (64%), Gaps = 20/302 (6%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +P+N QRR AKRKLERQLERRA +A++R+ LTI G L V V+ A V + D + Sbjct 1 MPSNEQRREAAKRKLERQLERRADRARKRKQLTIAGSVLGVVLVVAAGAVVFALTSGDDE 60 Query 77 STTSATPTDSASTSPPQAATAP-----PLPPFKPSANLGANCQYPPSPDKAVKPVKLPRT 131 +T A+ +S + SP P PLP +C Y P K V PRT Sbjct 61 AT-EASAAESVTASPQSPGVMPAGRSEPLPE-------KVSCTYTPGTQPPAKQVNPPRT 112 Query 132 GKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPML 191 + T +VSVSM T QGNIGL+L N +SPCTVN+F+SLA Q +F T CHRL TS L Sbjct 113 DDIDTTLQEVSVSMQTTQGNIGLILDNADSPCTVNNFLSLASQNYFDNTPCHRLVTSEGL 172 Query 192 AVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAG-PNTNSS 250 VLQCGDP G GTGGPGY FANE+PTDQY A+DP L PV YPRGT+AMAN+G P++N S Sbjct 173 KVLQCGDPTGAGTGGPGYGFANEFPTDQYEASDPSLQVPVTYPRGTIAMANSGQPDSNGS 232 Query 251 QFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAG----GGEDGKPATEVTITSVL 306 QFF+VY DS+LPPQYT FG + GL T++K+A AG G GG GKP + ITSV Sbjct 233 QFFLVYADSQLPPQYTAFGKVDETGLATIEKVAAAGDDGSMQAGG--GKPNLPIDITSVR 290 Query 307 LD 308 +D Sbjct 291 MD 292 >gi|226306420|ref|YP_002766380.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis PR4] gi|226185537|dbj|BAH33641.1| putative peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis PR4] Length=293 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 158/296 (54%), Positives = 191/296 (65%), Gaps = 7/296 (2%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVV-NKDDH 75 +P+N QRR AKRKLERQLERRA++A++R+ +TI G +L V V+ V + N+ D Sbjct 1 MPSNEQRREAAKRKLERQLERRAERARKRKQMTIAGTALGVVVVVGVVGGLIWFSNRSDD 60 Query 76 QSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVP 135 + + T D +S +P Q A A P P A+ +C YP A K PRT +P Sbjct 61 DANKTNTAADDSSLTP-QTAGAMPAGLSTPLADT-VSCSYPADGATASKANNPPRTDGIP 118 Query 136 TD--PAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAV 193 T A S+S+ T+QGNIGL L +SPCTVNSFVSLAQQ +F TTCHR+TTSP L V Sbjct 119 TTAPDATPSISVETSQGNIGLTLDGTKSPCTVNSFVSLAQQDYFNDTTCHRMTTSPSLQV 178 Query 194 LQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAG-PNTNSSQF 252 LQCGDP G GTGGPGY F NE+PT Y+ DP EPV Y RGT+AMAN G P +N SQF Sbjct 179 LQCGDPSGTGTGGPGYGFDNEFPTTAYATTDPAAQEPVTYARGTVAMANTGAPGSNGSQF 238 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 F+VY DS+LPPQYTVFGTI GL TLDK+A G G DGKP I +V LD Sbjct 239 FLVYGDSQLPPQYTVFGTIDETGLATLDKVAAGGSTPEG-DGKPNLTTDIKTVRLD 293 >gi|342858593|ref|ZP_08715248.1| PknE [Mycobacterium colombiense CECT 3035] gi|342134297|gb|EGT87477.1| PknE [Mycobacterium colombiense CECT 3035] Length=585 Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 112/200 (56%), Positives = 138/200 (69%), Gaps = 0/200 (0%) Query 108 NLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNS 167 +LGANCQY PD +PV P +G+V T P Q+ + TN G+I + LAN+ESPC VNS Sbjct 385 DLGANCQYRSVPDSVTRPVNPPPSGQVSTTPPQIGAVISTNVGDIAIQLANSESPCAVNS 444 Query 168 FVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKL 227 FVSLA+Q FF T C RL +S L CG P+ DG+GGPGY+F +EYPTDQY +DP L Sbjct 445 FVSLAKQQFFDNTQCARLISSQDGGSLLCGGPEVDGSGGPGYEFGDEYPTDQYKPDDPAL 504 Query 228 NEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGV 287 V+YPRGT+ MA GPNTN SQF ++++DS++ PQ TV GTI GL TLDKIA+AGV Sbjct 505 RATVVYPRGTIVMATEGPNTNGSQFALIFKDSEMEPQSTVLGTIDQAGLETLDKIARAGV 564 Query 288 AGGGEDGKPATEVTITSVLL 307 AG + G P V ITSV L Sbjct 565 AGNRQSGAPTNPVKITSVRL 584 >gi|111023854|ref|YP_706826.1| peptidylprolyl isomerase B [Rhodococcus jostii RHA1] gi|110823384|gb|ABG98668.1| peptidylprolyl isomerase B [Rhodococcus jostii RHA1] Length=292 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 156/303 (52%), Positives = 193/303 (64%), Gaps = 22/303 (7%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 +P+N QRR AKRKLERQLERRA +A++R+ LTI G L V V+ A V + D Sbjct 1 MPSNEQRREAAKRKLERQLERRADRARKRKQLTIAGSVLGVVLVVAAGAVVFALTSGDDD 60 Query 77 STTSATPTDSASTSPPQ------AATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPR 130 +T ++ + ++ PQ A + PLP +C Y PS K V PR Sbjct 61 ATEASA--AESVSASPQSPGVMPAGRSEPLPE-------KVSCTYTPSTQPPAKQVNPPR 111 Query 131 TGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPM 190 T + T +VSVSM T QGNIGL+L N +SPCTVN+F+SLA Q +F T CHRL TS Sbjct 112 TDDIDTTLQEVSVSMQTTQGNIGLILDNADSPCTVNNFLSLASQNYFDNTPCHRLVTSEG 171 Query 191 LAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAG-PNTNS 249 L VLQCGDP G GTGGPGY FANE+PTDQY +DP L PV YPRGT+AMAN+G P++N Sbjct 172 LKVLQCGDPTGAGTGGPGYGFANEFPTDQYEESDPSLQVPVTYPRGTIAMANSGQPDSNG 231 Query 250 SQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAG----GGEDGKPATEVTITSV 305 SQFF+VY DS+LPPQYT FG + GL T++K+A AG G GG GKP + ITSV Sbjct 232 SQFFLVYADSQLPPQYTAFGKVDETGLATIEKVAAAGDDGSMQAGG--GKPNLPIDITSV 289 Query 306 LLD 308 +D Sbjct 290 RMD 292 >gi|118462481|ref|YP_882645.1| protein kinase/peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium avium 104] gi|118163768|gb|ABK64665.1| protein kinase/peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Mycobacterium avium 104] Length=550 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 120/218 (56%), Positives = 148/218 (68%), Gaps = 0/218 (0%) Query 90 SPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQ 149 SP TAPPLP F +LG NCQY PD + +PV P +G+VPT P Q+ + TN Sbjct 332 SPAPGRTAPPLPAFVAPPDLGVNCQYRAVPDPSSRPVSPPPSGRVPTTPGQIGAVIATNL 391 Query 150 GNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGY 209 G+IG+ LAN+ESPC VNSF+SLA+Q FF T C RL SP L CG P DG+GGPGY Sbjct 392 GDIGISLANSESPCAVNSFISLARQRFFDNTQCARLVDSPDGGSLLCGGPDVDGSGGPGY 451 Query 210 QFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFG 269 +FA+EYP +QY +DP L ++YPRGT+ MA GPNTN SQF +++ DS++ PQ TV G Sbjct 452 EFADEYPANQYRPDDPALRATLLYPRGTVVMATEGPNTNGSQFALIFHDSEMDPQSTVLG 511 Query 270 TIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLL 307 TI GL TLDKIA+AG+AG G PA VTITSV + Sbjct 512 TIDPAGLATLDKIARAGIAGNRPSGPPANPVTITSVRI 549 >gi|25028321|ref|NP_738375.1| putative peptidylprolyl isomerase [Corynebacterium efficiens YS-314] gi|23493606|dbj|BAC18575.1| putative peptidylprolyl isomerase [Corynebacterium efficiens YS-314] Length=324 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 131/303 (44%), Positives = 177/303 (59%), Gaps = 24/303 (7%) Query 12 LACAFVPT----------NAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVI 61 +C + PT N +RR TA +LE++L+ R ++ K + +T+V SLA + ++ Sbjct 28 FSCTYFPTRKKGYNAVSNNKERRQTALSQLEKELKSRDRKEKTKP-MTVVAASLAVILLV 86 Query 62 VAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFK--PSANLGANCQYPPSP 119 V + ++ T+ +T+ P+ T PL + P N +C Y + Sbjct 87 VGGIWYAATRDTGEEAITA-----DETTTAPEDPTYEPLAVTRTTPLGNT-VSCTYEEA- 139 Query 120 DKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKG 179 +A + V P T VP V+V++ TNQG IG+ L + SPCTVN+ A +G++ Sbjct 140 GEASREVSTPETEDVPA-TGTVTVNLSTNQGEIGMELDRSVSPCTVNAIEHFAAEGYYDD 198 Query 180 TTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLA 239 CHRLTTS + VLQCGDP G G GGPG+QFANEYPTD+ + D LN PVIY RGT+A Sbjct 199 VVCHRLTTSGIY-VLQCGDPSGTGAGGPGFQFANEYPTDEAAQED--LNTPVIYERGTIA 255 Query 240 MANAGPNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATE 299 MANAG +TN SQFF+ Y DS LPP YT FG I +GL TLD IA+ GV GG DG PA + Sbjct 256 MANAGQDTNGSQFFLNYEDSPLPPVYTYFGQITEEGLATLDAIAETGVEGGATDGAPAEK 315 Query 300 VTI 302 V I Sbjct 316 VVI 318 >gi|254775910|ref|ZP_05217426.1| PknE [Mycobacterium avium subsp. avium ATCC 25291] Length=550 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 121/218 (56%), Positives = 148/218 (68%), Gaps = 0/218 (0%) Query 90 SPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQ 149 SP APPLP F +LGANCQY PD + +PV P +G+VPT P Q+ + TN Sbjct 332 SPAPGRPAPPLPAFVAPPDLGANCQYRAVPDPSSRPVSPPPSGRVPTTPGQIGAVIATNL 391 Query 150 GNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGY 209 G+IG+ LAN+ESPC VNSF+SLA+Q FF T C RL SP L CG P DG+GGPGY Sbjct 392 GDIGISLANSESPCAVNSFISLARQRFFDNTQCARLVDSPDGGSLLCGGPDVDGSGGPGY 451 Query 210 QFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFG 269 +FA+EYP +QY +DP L ++YPRGT+ MA GPNTN SQF +V+ DS++ PQ TV G Sbjct 452 EFADEYPANQYRPDDPALRATLLYPRGTVVMATEGPNTNGSQFALVFHDSEMDPQSTVLG 511 Query 270 TIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLL 307 TI GL TLDKIA+AG+AG G PA VTITSV + Sbjct 512 TIDPAGLATLDKIARAGIAGNRPSGPPANPVTITSVRI 549 >gi|259507376|ref|ZP_05750276.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium efficiens YS-314] gi|259165001|gb|EEW49555.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium efficiens YS-314] Length=282 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 128/285 (45%), Positives = 172/285 (61%), Gaps = 14/285 (4%) Query 20 NAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTT 79 N +RR TA +LE++L+ R ++ K + +T+V SLA + ++V + ++ T Sbjct 4 NKERRQTALSQLEKELKSRDRKEKTKP-MTVVAASLAVILLVVGGIWYAATRDTGEEAIT 62 Query 80 SATPTDSASTSPPQAATAPPLPPFK--PSANLGANCQYPPSPDKAVKPVKLPRTGKVPTD 137 + +T+ P+ T PL + P N +C Y + +A + V P T VP Sbjct 63 A-----DETTTAPEDPTYEPLAVTRTTPLGNT-VSCTYEEA-GEASREVSTPETEDVPA- 114 Query 138 PAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCG 197 V+V++ TNQG IG+ L + SPCTVN+ A +G++ CHRLTTS + VLQCG Sbjct 115 TGTVTVNLSTNQGEIGMELDRSVSPCTVNAIEHFAAEGYYDDVVCHRLTTSGIY-VLQCG 173 Query 198 DPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYR 257 DP G G GGPG+QFANEYPTD+ + D LN PVIY RGT+AMANAG +TN SQFF+ Y Sbjct 174 DPSGTGAGGPGFQFANEYPTDEAAQED--LNTPVIYERGTIAMANAGQDTNGSQFFLNYE 231 Query 258 DSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTI 302 DS LPP YT FG I +GL TLD IA+ GV GG DG PA +V I Sbjct 232 DSPLPPVYTYFGQITEEGLATLDAIAETGVEGGATDGAPAEKVVI 276 >gi|41407147|ref|NP_959983.1| PknE [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395498|gb|AAS03366.1| PknE [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461523|gb|EGO40391.1| protein kinase family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=550 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 120/218 (56%), Positives = 148/218 (68%), Gaps = 0/218 (0%) Query 90 SPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQ 149 SP APPLP F +LGANCQY PD + +PV P +G+VPT P Q+ + TN Sbjct 332 SPAPGRPAPPLPAFVAPPDLGANCQYRAVPDPSSRPVSPPPSGRVPTTPGQIGAVIATNL 391 Query 150 GNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGY 209 G+IG+ LAN+ESPC VNSF+SLA+Q FF T C RL SP L CG P DG+GGPGY Sbjct 392 GDIGISLANSESPCAVNSFISLARQRFFDNTQCARLVDSPDGGSLLCGGPDVDGSGGPGY 451 Query 210 QFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKLPPQYTVFG 269 +FA+EYP +QY +DP L ++YPRGT+ MA GPNTN SQF +++ DS++ PQ TV G Sbjct 452 EFADEYPANQYRPDDPALRATLLYPRGTVVMATEGPNTNGSQFALIFHDSEMDPQSTVLG 511 Query 270 TIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLL 307 TI GL TLDKIA+AG+AG G PA VTITSV + Sbjct 512 TIDPAGLATLDKIARAGIAGNRPSGPPANPVTITSVRI 549 >gi|145295770|ref|YP_001138591.1| hypothetical protein cgR_1696 [Corynebacterium glutamicum R] gi|140845690|dbj|BAF54689.1| hypothetical protein [Corynebacterium glutamicum R] gi|344044905|gb|EGV40579.1| hypothetical protein CgS9114_06265 [Corynebacterium glutamicum S9114] Length=280 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 131/290 (46%), Positives = 174/290 (60%), Gaps = 16/290 (5%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 + TN +RR A +LE++++ R ++ K + LT+V SLA + V+V + + + Sbjct 1 MSTNKERRQQALSQLEKEIKSRDRKEKTKP-LTVVFASLAVILVVVGGIWYAATRSTEDE 59 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLG--ANCQYPPSPDKAVKPVKLPRTGKV 134 T+ + +A T Q PL + +A LG C+YP + + A K V P T V Sbjct 60 VITADETSTTAETPDYQ-----PLALTRTTA-LGDSVTCEYPDAGE-ASKDVSKPATENV 112 Query 135 PTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVL 194 P V+V++ T QGNIG+ L + SPCTVN+ +A +G++ T CHR+TTS + VL Sbjct 113 PA-TGTVTVNLTTAQGNIGMELDRSVSPCTVNAVEHMASEGYYNDTVCHRITTSGIY-VL 170 Query 195 QCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM 254 QCGDP G G GGPG+ FANEYPTD+ A D L PVIY RGT+AMANAG +TN SQFF+ Sbjct 171 QCGDPSGTGAGGPGFSFANEYPTDE--ATD--LTTPVIYERGTIAMANAGADTNGSQFFL 226 Query 255 VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITS 304 Y DS L P YT FG I +GL TLD IA+ G GG DG PA EV I S Sbjct 227 NYEDSPLAPNYTYFGQITEEGLATLDAIAEVGAEGGTGDGAPAQEVRIES 276 >gi|19552861|ref|NP_600863.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Corynebacterium glutamicum ATCC 13032] gi|62390532|ref|YP_225934.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium glutamicum ATCC 13032] gi|41325870|emb|CAF20033.1| PEPTIDYL-PROLYL CIS-TRANS ISOMERASE [Corynebacterium glutamicum ATCC 13032] Length=280 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 130/290 (45%), Positives = 173/290 (60%), Gaps = 16/290 (5%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 + TN +RR A +LE++++ R ++ K + LT+V SLA + V+V + + + Sbjct 1 MSTNKERRQQALSQLEKEIKSRDRKEKTKP-LTVVFASLAVILVVVGGIWYAATRSTEDE 59 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLG--ANCQYPPSPDKAVKPVKLPRTGKV 134 T+ + +A T Q PL + +A LG C+YP + + A K V P T V Sbjct 60 VITADETSTTAETPDYQ-----PLALTRTTA-LGDSVTCEYPDAGE-ASKDVSKPATENV 112 Query 135 PTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVL 194 P V+V++ T QGNIG+ L + SPCTVN+ +A +G++ T CHR+TTS + VL Sbjct 113 PA-TGTVTVNLTTAQGNIGMELDRSVSPCTVNAVEHMASEGYYNDTVCHRITTSGIY-VL 170 Query 195 QCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM 254 QCGDP G GGPG+ FANEYPTD+ A D L PVIY RGT+AMANAG +TN SQFF+ Sbjct 171 QCGDPSSTGAGGPGFSFANEYPTDE--ATD--LTTPVIYERGTIAMANAGADTNGSQFFL 226 Query 255 VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITS 304 Y DS L P YT FG I +GL TLD IA+ G GG DG PA EV I S Sbjct 227 NYEDSPLAPNYTYFGQITEEGLATLDAIAEVGTEGGTGDGAPAQEVRIES 276 >gi|324999167|ref|ZP_08120279.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pseudonocardia sp. P1] Length=280 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 134/288 (47%), Positives = 167/288 (58%), Gaps = 20/288 (6%) Query 19 TNAQRRATAKRKLERQLERRAKQA-KRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQS 77 TN QRR AKRKL Q RA++A KR+R TI + V + A V + Sbjct 3 TNEQRREAAKRKLAAQQAHRAERAEKRKRTTTIAAVATVLVVALAAGGVYALTAA--WGG 60 Query 78 TTSATPTDSASTSPPQAATAPPLP-PFKPSA-NLGANCQYPPSPDKAVKPVKLPRTGKVP 135 A P A P + P +P P +P+A +C YP SP+ A KP P G+V Sbjct 61 PEEAAPPAQAQGDGPDTSGLPTVPLPQRPTALPASVDCAYPASPEPASKPATPPPGGQVS 120 Query 136 TDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQ 195 + QV ++ T+ G I L L +PCTVNSF +LAQQG+F GT+CHRLTTSP L VLQ Sbjct 121 AE-GQVPTTLQTSAGTIDLTLDRALAPCTVNSFANLAQQGYFDGTSCHRLTTSPGLQVLQ 179 Query 196 CGDPKGDGTGGPGYQFANE-YPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM 254 CGDP G G+GGPGY FA+E +P + Y RG LAMANAGP+TN SQFFM Sbjct 180 CGDPTGRGSGGPGYSFADEVFPE-------------LTYGRGLLAMANAGPDTNGSQFFM 226 Query 255 VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTI 302 +Y D++LPP YTVFG+I GL+TLD +AK G + G DG P V I Sbjct 227 IYGDAQLPPNYTVFGSIGPQGLSTLDTVAKGGESVGSGDGTPNVPVEI 274 >gi|333919492|ref|YP_004493073.1| peptidyl-prolyl cis-trans isomerase [Amycolicicoccus subflavus DQS3-9A1] gi|333481713|gb|AEF40273.1| Peptidyl-prolyl cis-trans isomerase [Amycolicicoccus subflavus DQS3-9A1] Length=292 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 128/299 (43%), Positives = 170/299 (57%), Gaps = 21/299 (7%) Query 19 TNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQS- 77 +N +RR AK+KLERQL+ RA+ +RR+ LTI V V+ A V V + D Sbjct 3 SNQERREAAKQKLERQLKERAEHDRRRKQLTIAAAVGGVVLVVGAAVAVFAVTRGDDTDV 62 Query 78 ---------TTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKL 128 T P ++ P A + LPP +C Y SP +A + +L Sbjct 63 AAEDEITNITDEQDPFEAPEPEPLPEARSEALPPT-------VDCDYAESPMEAAREAEL 115 Query 129 PRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTS 188 P T VPT+ V V++ + G + L L +SPCTVNSFVSLA+QG++ T CHRLTT Sbjct 116 PPTSDVPTE-GTVDVTLEMSGGPVTLTLDRAKSPCTVNSFVSLAEQGYYNDTECHRLTTG 174 Query 189 PMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTN 248 + VLQCGDP G GGPGY FA+E+P DQY + + + +Y RGT+AMANAGP TN Sbjct 175 GIF-VLQCGDPSASGAGGPGYSFADEFPADQYESPEEIMYAQTVYARGTVAMANAGPGTN 233 Query 249 SSQFFMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLL 307 SQFF+VY +S LPP Y VFGTI +GL +D++A+ G G DG P I +V + Sbjct 234 GSQFFLVYDESPLPPAYNVFGTIDDEGLRVIDEVAEGGAPGN--DGPPNNPADIATVTV 290 >gi|226306419|ref|YP_002766379.1| peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis PR4] gi|226185536|dbj|BAH33640.1| putative peptidyl-prolyl cis-trans isomerase [Rhodococcus erythropolis PR4] Length=270 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 105/184 (58%), Positives = 127/184 (70%), Gaps = 3/184 (1%) Query 100 LPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANN 159 LPP A+ +C YP S A K V P + V T+ V+V++ T G IG+ L Sbjct 60 LPPVPAPASATVDCSYP-SAAGAAKTVNPPNSTGVSTE-GTVNVALTTTAGPIGMELNRA 117 Query 160 ESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQ 219 E+PCTVNS VSL +Q FF T CHRL+T P L +LQCGDP G GTGGPGYQFANEYPT Sbjct 118 EAPCTVNSIVSLTEQKFFDDTPCHRLSTMPGLQILQCGDPSGKGTGGPGYQFANEYPTTT 177 Query 220 YSANDPKLNEPVIYPRGTLAMANAG-PNTNSSQFFMVYRDSKLPPQYTVFGTIQADGLTT 278 Y+ NDP L+ PV+YPRGTLAMA++ P++N SQFF+VY DS LPP YTVFGTI GL T Sbjct 178 YAGNDPALSLPVVYPRGTLAMAHSSVPDSNGSQFFLVYEDSMLPPDYTVFGTIDDSGLAT 237 Query 279 LDKI 282 ++KI Sbjct 238 IEKI 241 >gi|227833230|ref|YP_002834937.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium aurimucosum ATCC 700975] gi|262184216|ref|ZP_06043637.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium aurimucosum ATCC 700975] gi|227454246|gb|ACP32999.1| peptidyl-prolyl cis-trans isomerase [Corynebacterium aurimucosum ATCC 700975] Length=286 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 116/294 (40%), Positives = 172/294 (59%), Gaps = 11/294 (3%) Query 17 VPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQ 76 + TN+QR A +L+R+L+ R ++ K R + ++ +AAV +I V ++ + Sbjct 1 MSTNSQRLDDALNQLDRELKSRDRKQKSRPLGVVL---MAAVVIITLVGGIWFLSTRSSE 57 Query 77 STTSATPTDSASTSPPQAATAPPLPPFKPSANLG--ANCQYPPSPDKAVKPVKLPRTGKV 134 SA+ + +A TA L K + LG C+YP S D A + V P+ + Sbjct 58 EEEIQAEESSAANTTTEAPTAEALSG-KRAKPLGETVTCEYPESGD-ASREVPTPQGKDI 115 Query 135 PTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVL 194 P +V+V+ T QG+I + L + +PCTVN+ + ++ T CHR+T + VL Sbjct 116 PA-KGEVTVNFATKQGDIEMTLDRSLAPCTVNAITDMISAKYYDDTVCHRMTDGGIF-VL 173 Query 195 QCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM 254 QCGDP G G+GGP +QFANEYPTD+ A+D + +P +YP+G++AMANAG +TN SQFF+ Sbjct 174 QCGDPSGKGSGGPDFQFANEYPTDE--ADDAAMAQPALYPKGSIAMANAGEDTNGSQFFI 231 Query 255 VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD 308 Y+DS+LPP YT FG + G T+D IA GV G DG+PA EV IT ++ Sbjct 232 NYKDSELPPAYTYFGNLTEKGQKTIDAIAAKGVKDGQSDGEPAEEVRITKATIE 285 >gi|227488796|ref|ZP_03919112.1| peptidylprolyl isomerase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091218|gb|EEI26530.1| peptidylprolyl isomerase [Corynebacterium glucuronolyticum ATCC 51867] Length=295 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 126/290 (44%), Positives = 163/290 (57%), Gaps = 16/290 (5%) Query 20 NAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDD----- 74 N Q R + KL + L R ++ KR + TI+ +L V V+V + KDD Sbjct 9 NRQIREESLEKLRKDLATRERKEKRGPLGTILASAL--VIVLVVAGIYFFATKDDGAKIE 66 Query 75 -HQSTTSATPTDSASTSPPQAATAPPLPPFKPSAN-LGANCQYPPSPDKAVKPVKLPRTG 132 STT+ T + + TAP L + A C+YP A + V P T Sbjct 67 AEDSTTTVESTTMTTATEEPEVTAPALALTRSEALPETVTCEYPEE-GGAAREVSAPDTQ 125 Query 133 KVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLA 192 +P V+V++ TNQG+I + L + SPCTVN+ LA G++ T CHR+TT+ + Sbjct 126 DIPA-TGTVNVTLKTNQGDIPMTLDRSVSPCTVNAITHLASNGYYDDTVCHRITTNGIY- 183 Query 193 VLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQF 252 VLQCGDP G+G GGPG+ FANEYPTD+ A D + PV Y RGT+AMANAG TN SQF Sbjct 184 VLQCGDPTGNGAGGPGFNFANEYPTDE--AEDQ--SSPVNYQRGTIAMANAGIGTNGSQF 239 Query 253 FMVYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTI 302 F+ Y+DS LPP YT FG I +GL T+D IA G GG DG PA EV I Sbjct 240 FLNYKDSPLPPLYTYFGKISDEGLATIDGIAAKGTKTGGSDGAPAEEVRI 289 >gi|227542207|ref|ZP_03972256.1| peptidylprolyl isomerase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182036|gb|EEI63008.1| peptidylprolyl isomerase [Corynebacterium glucuronolyticum ATCC 51866] Length=279 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 123/281 (44%), Positives = 159/281 (57%), Gaps = 16/281 (5%) Query 29 RKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDD------HQSTTSAT 82 KL + L R ++ KR + TI+ +L V V+V + KDD STT+ Sbjct 2 EKLRKDLATRERKEKRGPLGTILASAL--VIVLVVAGIYFFATKDDGAKIEAEDSTTTVE 59 Query 83 PTDSASTSPPQAATAPPLPPFKPSAN-LGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQV 141 T + + TAP L + A C+YP A + V P T +P V Sbjct 60 STTMTTATEEPEVTAPALALTRSEALPETVTCEYPEE-GGAAREVSAPDTQDIPA-TGTV 117 Query 142 SVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKG 201 +V++ TNQG+I + L + SPCTVN+ LA G++ T CHR+TT+ + VLQCGDP G Sbjct 118 NVTLKTNQGDIPMTLDRSVSPCTVNAITHLASNGYYDDTVCHRITTNGIY-VLQCGDPTG 176 Query 202 DGTGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDSKL 261 +G GGPG+ FANEYPTD+ A D + PV Y RGT+AMANAG TN SQFF+ Y+DS L Sbjct 177 NGAGGPGFNFANEYPTDE--AEDQ--SSPVNYQRGTIAMANAGIGTNGSQFFLNYKDSPL 232 Query 262 PPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTI 302 PP YT FG I +GL T+D IA G GG DG PA EV I Sbjct 233 PPLYTYFGKISDEGLATIDGIAAKGTKTGGSDGAPAEEVRI 273 Lambda K H 0.314 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 524399257434 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40