BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2585c Length=557 Score E Sequences producing significant alignments: (Bits) Value gi|15609722|ref|NP_217101.1| lipoprotein [Mycobacterium tubercul... 1112 0.0 gi|15842124|ref|NP_337161.1| solute-binding family 5 protein [My... 1108 0.0 gi|340627602|ref|YP_004746054.1| putative lipoprotein [Mycobacte... 1108 0.0 gi|289444123|ref|ZP_06433867.1| conserved lipoprotein [Mycobacte... 1108 0.0 gi|306807616|ref|ZP_07444284.1| conserved lipoprotein [Mycobacte... 1069 0.0 gi|167968803|ref|ZP_02551080.1| extracellular solute-binding pro... 1030 0.0 gi|298526058|ref|ZP_07013467.1| conserved hypothetical protein [... 850 0.0 gi|240171979|ref|ZP_04750638.1| ABC-type dipeptide transport sys... 843 0.0 gi|296170830|ref|ZP_06852395.1| ABC superfamily ATP binding cass... 815 0.0 gi|183982136|ref|YP_001850427.1| ABC-type dipeptide transport sy... 806 0.0 gi|336461526|gb|EGO40394.1| ABC-type dipeptide transport system,... 803 0.0 gi|41407143|ref|NP_959979.1| hypothetical protein MAP1045 [Mycob... 802 0.0 gi|118462505|ref|YP_882648.1| extracellular solute-binding prote... 802 0.0 gi|118617351|ref|YP_905683.1| ABC-type dipeptide transport syste... 802 0.0 gi|342858590|ref|ZP_08715245.1| extracellular solute-binding pro... 790 0.0 gi|15827166|ref|NP_301429.1| lipoprotein [Mycobacterium leprae T... 784 0.0 gi|333991012|ref|YP_004523626.1| peptide ABC transporter peripla... 716 0.0 gi|108799245|ref|YP_639442.1| extracellular solute-binding prote... 708 0.0 gi|120403570|ref|YP_953399.1| extracellular solute-binding prote... 696 0.0 gi|145224396|ref|YP_001135074.1| extracellular solute-binding pr... 695 0.0 gi|315444728|ref|YP_004077607.1| peptide ABC transporter, peripl... 692 0.0 gi|118469995|ref|YP_887282.1| extracellular solute-binding prote... 676 0.0 gi|169629962|ref|YP_001703611.1| hypothetical protein MAB_2878c ... 617 1e-174 gi|289751208|ref|ZP_06510586.1| conserved lipoprotein [Mycobacte... 613 3e-173 gi|254775913|ref|ZP_05217429.1| hypothetical protein MaviaA2_147... 551 1e-154 gi|254821450|ref|ZP_05226451.1| extracellular solute-binding pro... 483 5e-134 gi|466821|gb|AAA17096.1| B1177_C2_197 [Mycobacterium leprae] 475 8e-132 gi|289751209|ref|ZP_06510587.1| conserved lipoprotein [Mycobacte... 424 2e-116 gi|312139499|ref|YP_004006835.1| high affinity substrate-binding... 421 2e-115 gi|325672611|ref|ZP_08152307.1| dipeptide ABC superfamily ATP bi... 418 1e-114 gi|229491974|ref|ZP_04385791.1| bacterial extracellular solute-b... 407 3e-111 gi|226306416|ref|YP_002766376.1| hypothetical protein RER_29290 ... 405 1e-110 gi|226366286|ref|YP_002784069.1| hypothetical protein ROP_68770 ... 403 5e-110 gi|111023850|ref|YP_706822.1| dipeptide-binding protein [Rhodoco... 402 1e-109 gi|54025659|ref|YP_119901.1| hypothetical protein nfa36890 [Noca... 374 3e-101 gi|333919488|ref|YP_004493069.1| ABC transporter substrate-bindi... 332 2e-88 gi|317508685|ref|ZP_07966340.1| extracellular solute-binding pro... 323 5e-86 gi|296393865|ref|YP_003658749.1| family 5 extracellular solute-b... 322 1e-85 gi|466812|gb|AAA17087.1| dciAE [Mycobacterium leprae] 321 2e-85 gi|343924322|ref|ZP_08763873.1| hypothetical protein GOALK_014_0... 320 3e-85 gi|326382132|ref|ZP_08203824.1| extracellular solute-binding pro... 316 8e-84 gi|262202236|ref|YP_003273444.1| extracellular solute-binding pr... 311 1e-82 gi|254820458|ref|ZP_05225459.1| hypothetical protein MintA_11046... 265 2e-68 gi|305681199|ref|ZP_07404006.1| bacterial extracellular solute-b... 212 2e-52 gi|225021307|ref|ZP_03710499.1| hypothetical protein CORMATOL_01... 211 4e-52 gi|271968440|ref|YP_003342636.1| dipeptide ABC transporter perip... 208 2e-51 gi|300858589|ref|YP_003783572.1| hypothetical protein cpfrc_0117... 199 1e-48 gi|227542212|ref|ZP_03972261.1| dipeptide-binding protein DciAE ... 198 2e-48 gi|337290889|ref|YP_004629910.1| hypothetical protein CULC22_012... 196 8e-48 gi|227549161|ref|ZP_03979210.1| dipeptide-binding protein DciAE ... 183 8e-44 >gi|15609722|ref|NP_217101.1| lipoprotein [Mycobacterium tuberculosis H37Rv] gi|148662424|ref|YP_001283947.1| extracellular solute-binding protein [Mycobacterium tuberculosis H37Ra] gi|307085271|ref|ZP_07494384.1| conserved lipoprotein [Mycobacterium tuberculosis SUMu012] gi|2496505|sp|Q50636.1|Y2585_MYCTU RecName: Full=Uncharacterized lipoprotein Rv2585c/MT2662; Flags: Precursor gi|1478227|emb|CAB01258.1| POSSIBLE CONSERVED LIPOPROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506576|gb|ABQ74385.1| extracellular solute-binding protein [Mycobacterium tuberculosis H37Ra] gi|308365179|gb|EFP54030.1| conserved lipoprotein [Mycobacterium tuberculosis SUMu012] Length=557 Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/557 (99%), Positives = 557/557 (100%), Gaps = 0/557 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV Sbjct 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA Sbjct 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 Query 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP Sbjct 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 Query 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY 480 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY Sbjct 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY 480 Query 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN Sbjct 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 Query 541 PTRWGAGWNMDRWALAR 557 PTRWGAGWNMDRWALAR Sbjct 541 PTRWGAGWNMDRWALAR 557 >gi|15842124|ref|NP_337161.1| solute-binding family 5 protein [Mycobacterium tuberculosis CDC1551] gi|31793769|ref|NP_856262.1| lipoprotein [Mycobacterium bovis AF2122/97] gi|121638470|ref|YP_978694.1| putative lipoprotein [Mycobacterium bovis BCG str. Pasteur 1173P2] 62 more sequence titles Length=557 Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/557 (99%), Positives = 556/557 (99%), Gaps = 0/557 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV Sbjct 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA Sbjct 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 Query 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP Sbjct 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 Query 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY 480 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGS AMDAYDLHSGNGNNLSGY Sbjct 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSSAMDAYDLHSGNGNNLSGY 480 Query 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN Sbjct 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 Query 541 PTRWGAGWNMDRWALAR 557 PTRWGAGWNMDRWALAR Sbjct 541 PTRWGAGWNMDRWALAR 557 >gi|340627602|ref|YP_004746054.1| putative lipoprotein [Mycobacterium canettii CIPT 140010059] gi|340005792|emb|CCC44958.1| putative conserved lipoprotein [Mycobacterium canettii CIPT 140010059] Length=557 Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/557 (99%), Positives = 555/557 (99%), Gaps = 0/557 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV Sbjct 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA Sbjct 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 Query 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP Sbjct 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 Query 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY 480 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGS AMDAYDLHSGNGNNLSGY Sbjct 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSSAMDAYDLHSGNGNNLSGY 480 Query 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 ANAQIDGIISALAVSADPAER RLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN Sbjct 481 ANAQIDGIISALAVSADPAERVRLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 Query 541 PTRWGAGWNMDRWALAR 557 PTRWGAGWNMDRWALAR Sbjct 541 PTRWGAGWNMDRWALAR 557 >gi|289444123|ref|ZP_06433867.1| conserved lipoprotein [Mycobacterium tuberculosis T46] gi|289570756|ref|ZP_06450983.1| conserved lipoprotein [Mycobacterium tuberculosis T17] gi|289417042|gb|EFD14282.1| conserved lipoprotein [Mycobacterium tuberculosis T46] gi|289544510|gb|EFD48158.1| conserved lipoprotein [Mycobacterium tuberculosis T17] Length=557 Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/557 (99%), Positives = 555/557 (99%), Gaps = 0/557 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 LMPSHVIADQLHIDVTAALLSNNVS VEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSVVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV Sbjct 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA Sbjct 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 Query 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP Sbjct 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 Query 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGY 480 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGS AMDAYDLHSGNGNNLSGY Sbjct 421 AGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSSAMDAYDLHSGNGNNLSGY 480 Query 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN Sbjct 481 ANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRN 540 Query 541 PTRWGAGWNMDRWALAR 557 PTRWGAGWNMDRWALAR Sbjct 541 PTRWGAGWNMDRWALAR 557 >gi|306807616|ref|ZP_07444284.1| conserved lipoprotein [Mycobacterium tuberculosis SUMu007] gi|308345938|gb|EFP34789.1| conserved lipoprotein [Mycobacterium tuberculosis SUMu007] Length=536 Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/536 (99%), Positives = 535/536 (99%), Gaps = 0/536 (0%) Query 22 LVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ 81 +VAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ Sbjct 1 MVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ 60 Query 82 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ 141 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ Sbjct 61 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ 120 Query 142 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLS 201 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLS Sbjct 121 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLS 180 Query 202 NNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGT 261 NNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGT Sbjct 181 NNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGT 240 Query 262 KAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFA 321 KAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFA Sbjct 241 KAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFA 300 Query 322 PQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVD 381 PQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVD Sbjct 301 PQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVD 360 Query 382 PAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDG 441 PAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDG Sbjct 361 PAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDG 420 Query 442 KIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAER 501 KIDVLLASTGGATGSGSSGS AMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAER Sbjct 421 KIDVLLASTGGATGSGSSGSSAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAER 480 Query 502 ARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 ARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR Sbjct 481 ARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 536 >gi|167968803|ref|ZP_02551080.1| extracellular solute-binding protein [Mycobacterium tuberculosis H37Ra] Length=518 Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/517 (99%), Positives = 514/517 (99%), Gaps = 0/517 (0%) Query 41 YVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLI 100 Y GALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLI Sbjct 2 YRGHGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLI 61 Query 101 LDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKAR 160 LDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKAR Sbjct 62 LDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKAR 121 Query 161 VSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDL 220 VSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDL Sbjct 122 VSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDL 181 Query 221 KPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDR 280 KPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDR Sbjct 182 KPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDR 241 Query 281 VNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVP 340 VNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVP Sbjct 242 VNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVP 301 Query 341 RDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGY 400 RDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGY Sbjct 302 RDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGY 361 Query 401 GRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSG 460 GRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSG Sbjct 362 GRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSG 421 Query 461 SCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLP 520 SCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLP Sbjct 422 SCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLP 481 Query 521 LYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 LYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR Sbjct 482 LYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 518 >gi|298526058|ref|ZP_07013467.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495852|gb|EFI31146.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=440 Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/428 (99%), Positives = 428/428 (100%), Gaps = 0/428 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV Sbjct 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA Sbjct 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 Query 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP Sbjct 361 TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAP 420 Query 421 AGITVSDV 428 AGITVSDV Sbjct 421 AGITVSDV 428 >gi|240171979|ref|ZP_04750638.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium kansasii ATCC 12478] Length=572 Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/527 (84%), Positives = 475/527 (91%), Gaps = 0/527 (0%) Query 31 CSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGT 90 CSGSAA QIDYVVDGAL TYNTNTVIGAASAGAQAFAR LTGFGYHGPDGQVVAD DFGT Sbjct 46 CSGSAAGQIDYVVDGALPTYNTNTVIGAASAGAQAFARVLTGFGYHGPDGQVVADHDFGT 105 Query 91 VSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANI 150 +SVV GSPL+LDYQI+D+AVYSDG+PVTCDDLVL+WAAQSGRFPGFDAATQAGY+DIANI Sbjct 106 ISVVGGSPLVLDYQIADNAVYSDGKPVTCDDLVLSWAAQSGRFPGFDAATQAGYIDIANI 165 Query 151 ECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQI 210 ECT GQKKARVSFIPDR VVD++QLF ATSLMPSHVIA+QL++D+T ALL+N V VEQI Sbjct 166 ECTPGQKKARVSFIPDRGVVDYTQLFGATSLMPSHVIAEQLNVDITTALLTNKVPVVEQI 225 Query 211 ARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITV 270 ARLWN+TWDLK G DE+ FPSSGPY+IESVLD GAVVLV NDRWWG KAITKR+TV Sbjct 226 ARLWNTTWDLKSGLKPDEISKHFPSSGPYQIESVLDGGAVVLVTNDRWWGAKAITKRVTV 285 Query 271 WPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSR 330 WPQGADIQDRVNNR+VDVVDVAAGSSG+L TPD+YQR D PS GIEQLIFAP+G LA+ R Sbjct 286 WPQGADIQDRVNNRNVDVVDVAAGSSGALATPDNYQRIDSPSDGIEQLIFAPRGPLAEVR 345 Query 331 TRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALG 390 RRA+ALC PR+AIARDAGV IANSRLSPAT+DA+ ADGAAEA QF + DPAAARDALG Sbjct 346 ARRAIALCTPREAIARDAGVAIANSRLSPATEDAVAQADGAAEASQFIKGDPAAARDALG 405 Query 391 GTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLAST 450 G+PL+VRIGY PNARLAA G IA +CAPAGITV+DVT+DT GPQALRDGKIDVLLAST Sbjct 406 GSPLSVRIGYRGPNARLAAVGGAIAKSCAPAGITVADVTLDTSGPQALRDGKIDVLLAST 465 Query 451 GGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAP 510 GGATGSGS+GS AMDAYDLHSGNGNNLSGYAN QID II ALAVSADPAER RLLAEAAP Sbjct 466 GGATGSGSTGSSAMDAYDLHSGNGNNLSGYANPQIDNIIGALAVSADPAERVRLLAEAAP 525 Query 511 VLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 VLW EMPTLPL RQQRTLLMS KMYAVSRNPTRWGAGWNMDRWAL + Sbjct 526 VLWAEMPTLPLCRQQRTLLMSKKMYAVSRNPTRWGAGWNMDRWALMQ 572 >gi|296170830|ref|ZP_06852395.1| ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894519|gb|EFG74259.1| ABC superfamily ATP binding cassette transporter, binding protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=549 Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/530 (80%), Positives = 462/530 (88%), Gaps = 4/530 (0%) Query 28 LTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRD 87 L ACSGS AAQ+DYVVDG LVTYNTNTV+GAASAGAQAFARTL GF YHGPDGQ VADRD Sbjct 24 LAACSGSTAAQVDYVVDGPLVTYNTNTVVGAASAGAQAFARTLAGFSYHGPDGQTVADRD 83 Query 88 FGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDI 147 FGTVSVV GSPL+LDYQI+D+AVYSDG+PVTCDDLVLAWAAQSGR+P FDAAT+AGY+DI Sbjct 84 FGTVSVVGGSPLVLDYQIADNAVYSDGKPVTCDDLVLAWAAQSGRYPEFDAATRAGYLDI 143 Query 148 ANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAV 207 AN+EC GQKKARVSFIPDR VVD++QLFTATS+MPSHVIAD+LH+DVTAALLSNN V Sbjct 144 ANVECLPGQKKARVSFIPDRGVVDYNQLFTATSMMPSHVIADRLHVDVTAALLSNNGELV 203 Query 208 EQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKR 267 +QIA+LWN+ WDLKPG FPSSGPYKIE VLD GAVVLVANDRWWG KA+TKR Sbjct 204 QQIAKLWNTIWDLKPGLDL----KNFPSSGPYKIERVLDGGAVVLVANDRWWGPKAVTKR 259 Query 268 ITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLA 327 +TVWPQG DIQDRVNNRSVDVVDVAAGSSG+L TPD+Y R D PS GIEQLIFAPQG LA Sbjct 260 VTVWPQGPDIQDRVNNRSVDVVDVAAGSSGTLTTPDNYDRADSPSDGIEQLIFAPQGPLA 319 Query 328 QSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARD 387 Q + RRALALC PRD +ARDAGVP+ANSRLSPA DD +T + GAAEA FG+ DP AARD Sbjct 320 QPKARRALALCTPRDTLARDAGVPVANSRLSPALDDPVTASVGAAEAGPFGKADPGAARD 379 Query 388 ALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLL 447 ALGG PLTVRIGY PNARLA +G I +CA AGITV++V +DT GPQALRDGKIDVLL Sbjct 380 ALGGAPLTVRIGYQGPNARLAVNVGVITKSCAAAGITVANVALDTSGPQALRDGKIDVLL 439 Query 448 ASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAE 507 ASTGGA GSGS+GS AMDAY+LHSGNGNNLSGYAN QID I ALAVSADPAER RLL E Sbjct 440 ASTGGAAGSGSTGSSAMDAYELHSGNGNNLSGYANPQIDSTIGALAVSADPAERVRLLGE 499 Query 508 AAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 AAP+LW +MPTLPLYRQQRTLLMS KMYAVS+NPTRWGAGWNMDRWAL + Sbjct 500 AAPILWGDMPTLPLYRQQRTLLMSKKMYAVSKNPTRWGAGWNMDRWALVQ 549 >gi|183982136|ref|YP_001850427.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium marinum M] gi|183175462|gb|ACC40572.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium marinum M] Length=570 Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/520 (82%), Positives = 459/520 (89%), Gaps = 4/520 (0%) Query 38 QIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGS 97 QIDYVVDG L TYNTNTV GAASAGAQAFAR LTGFGYHGPDGQVVAD DFGT+SVV G+ Sbjct 55 QIDYVVDGPLPTYNTNTVTGAASAGAQAFARVLTGFGYHGPDGQVVADHDFGTISVVGGA 114 Query 98 PLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQK 157 PL+LDYQI+DDAVYSDG+ VTCDDLVLAWAA+SGR+ GFDAATQAGYVDIANIECT GQK Sbjct 115 PLVLDYQIADDAVYSDGKQVTCDDLVLAWAAESGRYAGFDAATQAGYVDIANIECTPGQK 174 Query 158 KARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNST 217 KARVSFIPDR+VVD++QLFTATSLMPSHV+AD+L IDVTAALL N VEQIARLWN+T Sbjct 175 KARVSFIPDRAVVDYAQLFTATSLMPSHVLADELGIDVTAALLDNKAPQVEQIARLWNTT 234 Query 218 WDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADI 277 WDLK G FPSSGPYKIES+LDDG VVLVANDRWWG KAITKR+ V PQGADI Sbjct 235 WDLKRGVD----LKHFPSSGPYKIESILDDGGVVLVANDRWWGAKAITKRVIVRPQGADI 290 Query 278 QDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALAL 337 QDRVNNR VDVVDVAAGSSG+L TPD+YQRTD PS GI+QLIF+P+G LA R RRA+AL Sbjct 291 QDRVNNRDVDVVDVAAGSSGTLTTPDNYQRTDSPSEGIQQLIFSPKGPLADVRNRRAVAL 350 Query 338 CVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVR 397 C PRDAI+RDAGVPIANSRL+PAT+DA+ ADG AE +F + DP AARDALGG PLT+R Sbjct 351 CTPRDAISRDAGVPIANSRLNPATEDAIAGADGTAEGGKFTKGDPGAARDALGGAPLTLR 410 Query 398 IGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSG 457 IGY PNARLAA IG IA +C PAGI+VSDVT+DT GP ALRDGKIDVLLASTGGA+GSG Sbjct 411 IGYHGPNARLAAIIGAIAKSCGPAGISVSDVTLDTAGPGALRDGKIDVLLASTGGASGSG 470 Query 458 SSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMP 517 S+GS +MDAYDLHSGNGNNLSGYAN QIDGIISALAVSADPAER RLLAE APVLWDEMP Sbjct 471 STGSSSMDAYDLHSGNGNNLSGYANPQIDGIISALAVSADPAERVRLLAEGAPVLWDEMP 530 Query 518 TLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 TLPLYRQ+RTLLMS KMYAVSRNPTRWGAGWNMDRWAL + Sbjct 531 TLPLYRQERTLLMSKKMYAVSRNPTRWGAGWNMDRWALMQ 570 >gi|336461526|gb|EGO40394.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium avium subsp. paratuberculosis S397] Length=557 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/542 (77%), Positives = 465/542 (86%), Gaps = 1/542 (0%) Query 17 VGTATLV-AATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGY 75 +G A LV A L C+GSAAA+IDYVVDG L +YN NTV+GAASAGAQAFARTL GF Y Sbjct 16 IGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSY 75 Query 76 HGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPG 135 HGPDGQ V DRDFGTVSVV G+PL+LDYQI+D+AVYSDG+PVTCDD+VLAWAAQSGR+P Sbjct 76 HGPDGQTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPE 135 Query 136 FDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDV 195 F+AATQAGY+DIAN+EC GQKKARVSF+PDR +VD++QLFTAT+LMPSHVIADQL++DV Sbjct 136 FNAATQAGYLDIANVECMPGQKKARVSFVPDRGIVDYNQLFTATTLMPSHVIADQLNVDV 195 Query 196 TAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVAN 255 TAALLS+N V QIARLWN+ WDLKPG +E+ RFPSSGPYK+++VLD GAVVLVAN Sbjct 196 TAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYKLQAVLDGGAVVLVAN 255 Query 256 DRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGI 315 DRWWG KAITKRITVWPQG DIQDRVNNRSVDVVDVA GSSG+L TPD+Y R+D PS GI Sbjct 256 DRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLATPDNYDRSDAPSDGI 315 Query 316 EQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEAR 375 EQLIFAPQG L+ + RRA ALC PRD +A+DAG PIANSRL PA DDA++ DGAAEA Sbjct 316 EQLIFAPQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSAGDGAAEAA 375 Query 376 QFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGP 435 FG+ DP AAR+ALGG PL VRIGY PNARLA +G I ACAPAGITVS VT+D+ GP Sbjct 376 PFGKADPVAAREALGGAPLAVRIGYQGPNARLAVNVGVITKACAPAGITVSGVTLDSAGP 435 Query 436 QALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVS 495 QALRDGKID LLASTGGATGSGSSGS AMDAY LH+GNGNNLSGY+N Q+D I ALAVS Sbjct 436 QALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGYSNPQVDNAIGALAVS 495 Query 496 ADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 ADPAER RLLAE APVLW ++PTLPLYRQQRTLL+S KMYAVS+NPTRWGAGWNMDRWAL Sbjct 496 ADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWAL 555 Query 556 AR 557 + Sbjct 556 VQ 557 >gi|41407143|ref|NP_959979.1| hypothetical protein MAP1045 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395494|gb|AAS03362.1| hypothetical protein MAP_1045 [Mycobacterium avium subsp. paratuberculosis K-10] Length=557 Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/542 (77%), Positives = 465/542 (86%), Gaps = 1/542 (0%) Query 17 VGTATLV-AATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGY 75 +G A LV A L C+GSAAA+IDYVVDG L +YN NTV+GAASAGAQAFARTL GF Y Sbjct 16 IGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSY 75 Query 76 HGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPG 135 HGPDGQ V DRDFGTVSVV G+PL+LDYQI+D+AVYSDG+PVTCDD+VLAWAAQSGR+P Sbjct 76 HGPDGQTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPE 135 Query 136 FDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDV 195 F+AATQAGY+DIAN+EC GQKKARVSF+PDR +VD++QLFTAT+LMPSHVIADQL++DV Sbjct 136 FNAATQAGYLDIANVECMPGQKKARVSFVPDRGIVDYNQLFTATTLMPSHVIADQLNVDV 195 Query 196 TAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVAN 255 TAALLS+N V QIARLWN+ WDLKPG +E+ RFPSSGPYK+++VLD GAVVLVAN Sbjct 196 TAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYKLQAVLDGGAVVLVAN 255 Query 256 DRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGI 315 DRWWG KAITKRITVWPQG DIQDRVNNRSVDVVDVA GSSG+L TPD+Y R+D PS GI Sbjct 256 DRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLATPDNYDRSDAPSDGI 315 Query 316 EQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEAR 375 EQLIFAPQG L+ + RRA ALC PRD +A+DAG PIANSRL PA DDA++ DGAAEA Sbjct 316 EQLIFAPQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSADDGAAEAA 375 Query 376 QFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGP 435 FG+ DP AAR+ALGG PL VRIGY PNARLA +G I ACAPAGITVS VT+D+ GP Sbjct 376 PFGKADPVAAREALGGAPLAVRIGYQGPNARLAVNVGVITKACAPAGITVSGVTLDSAGP 435 Query 436 QALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVS 495 QALRDGKID LLASTGGATGSGSSGS AMDAY LH+GNGNNLSGY+N Q+D I ALAVS Sbjct 436 QALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGYSNPQVDNAIGALAVS 495 Query 496 ADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 ADPAER RLLAE APVLW ++PTLPLYRQQRTLL+S KMYAVS+NPTRWGAGWNMDRWAL Sbjct 496 ADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWAL 555 Query 556 AR 557 + Sbjct 556 VQ 557 >gi|118462505|ref|YP_882648.1| extracellular solute-binding protein, family protein 5 [Mycobacterium avium 104] gi|118163792|gb|ABK64689.1| bacterial extracellular solute-binding protein, family protein 5 [Mycobacterium avium 104] Length=557 Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/531 (78%), Positives = 461/531 (87%), Gaps = 0/531 (0%) Query 27 TLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADR 86 TL C+GSAAA+IDYVVDG L +YN NTV+GAASAGAQAFARTL GF YHGPDGQ V DR Sbjct 27 TLAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSYHGPDGQTVPDR 86 Query 87 DFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVD 146 DFGTVSVV G+PL+LDYQI+D+AVYSDG+PVTCDD+VLAWAAQSGR+P F+AATQAGY+D Sbjct 87 DFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPEFNAATQAGYLD 146 Query 147 IANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSA 206 IAN+EC GQKKARVSFIPDR +VD++QLFTAT+LMPSHVIADQL++DVTAALLS+N Sbjct 147 IANVECMPGQKKARVSFIPDRGIVDYNQLFTATTLMPSHVIADQLNVDVTAALLSHNAPL 206 Query 207 VEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITK 266 V QIARLWN+ WDLKPG +E+ RFPSSGPYK+++VLD GAVVLVANDRWWG KAITK Sbjct 207 VAQIARLWNTIWDLKPGLKGEEILKRFPSSGPYKLQAVLDGGAVVLVANDRWWGPKAITK 266 Query 267 RITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSL 326 RITVWPQG DIQDRVNNRSVDVVDVAAGSSG+L TPD+Y R+D PS GIEQLIFAPQG L Sbjct 267 RITVWPQGPDIQDRVNNRSVDVVDVAAGSSGTLATPDNYDRSDAPSDGIEQLIFAPQGPL 326 Query 327 AQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAAR 386 + + RRA ALC PRD +A+DAG PIANSRL PA DDA++ DGAAEA FG+ DP AAR Sbjct 327 SAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSAGDGAAEAAPFGKADPVAAR 386 Query 387 DALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVL 446 +ALGG PL VRIGY PNARLA +G I ACAPAGITVS VT+D+ GPQALRDGKID L Sbjct 387 EALGGAPLAVRIGYQGPNARLAVNVGVITKACAPAGITVSGVTLDSAGPQALRDGKIDAL 446 Query 447 LASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLA 506 LASTGGATGSGSSGS AMDAY LH+GNGNNLSGY+N Q+D I ALAVSADPAER RLLA Sbjct 447 LASTGGATGSGSSGSSAMDAYALHTGNGNNLSGYSNPQVDNAIGALAVSADPAERVRLLA 506 Query 507 EAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 E APVLW ++PTLPLYRQQRTLL+S KMYAVS+NPTRWGAGWNMDRWAL + Sbjct 507 ETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKNPTRWGAGWNMDRWALVQ 557 >gi|118617351|ref|YP_905683.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium ulcerans Agy99] gi|118569461|gb|ABL04212.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium ulcerans Agy99] Length=570 Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/520 (81%), Positives = 457/520 (88%), Gaps = 4/520 (0%) Query 38 QIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGS 97 QIDYVVDG L TYNTNTV GAASAGAQAFAR LTGFGYHGPDGQVVAD DFGT+SVV G+ Sbjct 55 QIDYVVDGPLPTYNTNTVTGAASAGAQAFARVLTGFGYHGPDGQVVADHDFGTISVVGGA 114 Query 98 PLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQK 157 PL+LDYQI+DDAVYSDG+ VTCDDLVLAWAA+SGR+ GFDAATQAGYVDIANIECT GQK Sbjct 115 PLVLDYQIADDAVYSDGKQVTCDDLVLAWAAESGRYAGFDAATQAGYVDIANIECTPGQK 174 Query 158 KARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNST 217 KARVSFIPDR+ VD++QLFTATSLMPSHV+AD+L IDVTAALL N VEQIARLWN+T Sbjct 175 KARVSFIPDRAGVDYAQLFTATSLMPSHVLADELGIDVTAALLDNKAPQVEQIARLWNTT 234 Query 218 WDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADI 277 WDLK G FPSSGPYKIES+LDDG VVLVANDRWWG KAITKR+ V PQGADI Sbjct 235 WDLKRGVD----LKHFPSSGPYKIESILDDGGVVLVANDRWWGAKAITKRVIVRPQGADI 290 Query 278 QDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALAL 337 QDRVNNR VDVVDVAAGSSG+L TPD+YQRTD PS GI+QLIF+P+G LA R RRA+AL Sbjct 291 QDRVNNRDVDVVDVAAGSSGTLTTPDNYQRTDSPSEGIQQLIFSPKGPLADVRNRRAVAL 350 Query 338 CVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVR 397 C PRDAI+RDAGVPIANSRL+PAT+DA+ ADG AE +F + DP AARDALGG PLT+R Sbjct 351 CTPRDAISRDAGVPIANSRLNPATEDAIAGADGTAEGGKFTKGDPGAARDALGGAPLTLR 410 Query 398 IGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSG 457 IGY PNARLAA IG IA +C PAGI+VSDVT+DT GP ALRDGKIDVLLASTGGA+GSG Sbjct 411 IGYHGPNARLAAIIGAIAKSCGPAGISVSDVTLDTAGPGALRDGKIDVLLASTGGASGSG 470 Query 458 SSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMP 517 S+GS +MDAYDLHSGNGNNLSGYAN QIDGIIS LAVSADPAER RLLAE APVLWDEMP Sbjct 471 STGSSSMDAYDLHSGNGNNLSGYANPQIDGIISGLAVSADPAERVRLLAEGAPVLWDEMP 530 Query 518 TLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 TLPLYRQ+RTLLMS KMYAVSRNPTRWGAGWNMDRWAL + Sbjct 531 TLPLYRQERTLLMSKKMYAVSRNPTRWGAGWNMDRWALMQ 570 >gi|342858590|ref|ZP_08715245.1| extracellular solute-binding protein, family protein 5 [Mycobacterium colombiense CECT 3035] gi|342134294|gb|EGT87474.1| extracellular solute-binding protein, family protein 5 [Mycobacterium colombiense CECT 3035] Length=555 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/522 (79%), Positives = 455/522 (88%), Gaps = 0/522 (0%) Query 34 SAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSV 93 SAA+QIDYVVDG L TYNTNTV GAASAGAQAFARTLTGF YHGPDGQ VADRDFGTVSV Sbjct 32 SAASQIDYVVDGPLSTYNTNTVAGAASAGAQAFARTLTGFSYHGPDGQTVADRDFGTVSV 91 Query 94 VEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECT 153 V G+PL+LDYQI+D+AVYSDG+PVTCDD+VLAWAAQSG+FP F AATQAGY+DIAN+EC Sbjct 92 VGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGKFPDFHAATQAGYLDIANVECM 151 Query 154 AGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARL 213 GQKKARVSFIPDR VVD++QLFTAT+LMPSHVIADQL++DVTAALLSNNV V+QIARL Sbjct 152 PGQKKARVSFIPDRGVVDYAQLFTATTLMPSHVIADQLNVDVTAALLSNNVPLVQQIARL 211 Query 214 WNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQ 273 WN+ WDLKPG +E+ RFPSSGPYKIESVLD GAVVLVANDRWWG KAITKR+TVW Q Sbjct 212 WNTIWDLKPGLKPEEILKRFPSSGPYKIESVLDGGAVVLVANDRWWGPKAITKRVTVWSQ 271 Query 274 GADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRR 333 G DIQDRVN+RSVDVVDVAAGSSG+L TPD+Y+R+D PS G+EQLIFAPQG LA + RR Sbjct 272 GPDIQDRVNSRSVDVVDVAAGSSGALTTPDNYERSDGPSDGVEQLIFAPQGPLAAPKARR 331 Query 334 ALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTP 393 A+ALC PRD++A+DAG PIANSRL PA DDA++ DGAAEA F + DPAAAR ALGG P Sbjct 332 AVALCTPRDSLAKDAGTPIANSRLDPAGDDAVSAGDGAAEAEPFSKADPAAARTALGGAP 391 Query 394 LTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGA 453 LTVRIGY PNARLA +G I ACA AG+TV+ V +D PGPQALRDGKID LLASTGGA Sbjct 392 LTVRIGYQGPNARLAVNVGVITKACAAAGVTVTGVILDGPGPQALRDGKIDALLASTGGA 451 Query 454 TGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLW 513 TGSGS+GS A+DAY LH+GNGNNLSGY+N Q+D ISALAVSAD AER RLL E APVLW Sbjct 452 TGSGSTGSSALDAYTLHTGNGNNLSGYSNPQVDNAISALAVSADAAERVRLLTETAPVLW 511 Query 514 DEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 +MPTLPLYRQQRTLL S KMYAV +NPTRWGAGWNMDRWAL Sbjct 512 GDMPTLPLYRQQRTLLTSKKMYAVGKNPTRWGAGWNMDRWAL 553 >gi|15827166|ref|NP_301429.1| lipoprotein [Mycobacterium leprae TN] gi|221229644|ref|YP_002503060.1| putative lipoprotein [Mycobacterium leprae Br4923] gi|13432281|sp|Q49646.2|Y489_MYCLE RecName: Full=Uncharacterized lipoprotein ML0489; Flags: Precursor gi|3136011|emb|CAA19082.1| putative lipoprotein [Mycobacterium leprae] gi|13092714|emb|CAC29997.1| putative lipoprotein [Mycobacterium leprae] gi|219932751|emb|CAR70582.1| putative lipoprotein [Mycobacterium leprae Br4923] Length=555 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/542 (79%), Positives = 469/542 (87%), Gaps = 8/542 (1%) Query 20 ATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPD 79 ATLVA+ LTACSGSAA +I YVVDGAL TYNTNT++GAASAGAQAFARTL GFGYHGPD Sbjct 18 ATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAGAQAFARTLIGFGYHGPD 77 Query 80 GQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAA 139 GQ+VAD DFGT++VV G PL+LDYQI+D+AVYSDG+ VTCDDLVL WAAQSGRFPGFDAA Sbjct 78 GQIVADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDLVLTWAAQSGRFPGFDAA 137 Query 140 TQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAAL 199 TQAGY DIANIEC AGQKK+RV F+PDRSVVD+ QLF ATS+MPSHVIADQL+IDVT AL Sbjct 138 TQAGYRDIANIECLAGQKKSRVFFVPDRSVVDYEQLFAATSMMPSHVIADQLNIDVTEAL 197 Query 200 LSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWW 259 L++N + VEQIARLWN+TWDLKP ++R RFPSSGPYKIESVL+ GAVVLVANDRWW Sbjct 198 LTHNATLVEQIARLWNTTWDLKPAV---DLR-RFPSSGPYKIESVLNGGAVVLVANDRWW 253 Query 260 GTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLI 319 G KA TKRITV PQ ADIQDRVNNRSVDVVDVA GSSGSL TPD+Y R D PSAGIEQLI Sbjct 254 GLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYARIDSPSAGIEQLI 313 Query 320 FAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGR 379 FAPQG LA + RRALALC PRD +ARDAG+ IANSRLSPAT+DA+ ADGA EA QF + Sbjct 314 FAPQGLLAAAAARRALALCTPRDVVARDAGLSIANSRLSPATEDAIAAADGAREAGQFSK 373 Query 380 VDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDT----PGP 435 DPAAA DAL G L VRIGY PNARLAAT+GTIA ACA AGI+VS VT+D+ GP Sbjct 374 ADPAAAHDALSGETLPVRIGYQGPNARLAATVGTIAKACAVAGISVSSVTLDSSTDPSGP 433 Query 436 QALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVS 495 QALRDGKIDVLLASTGGATGSGSSGS +MDAYDLH+GNGNNLSGYANAQ+D I ALAVS Sbjct 434 QALRDGKIDVLLASTGGATGSGSSGSSSMDAYDLHTGNGNNLSGYANAQVDNNIGALAVS 493 Query 496 ADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 ADPAER RLLA++APVLW +MPTLPLYRQQR LLMS MYAV+RNPTRWGAGWNMDRWAL Sbjct 494 ADPAERVRLLADSAPVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPTRWGAGWNMDRWAL 553 Query 556 AR 557 R Sbjct 554 VR 555 >gi|333991012|ref|YP_004523626.1| peptide ABC transporter periplasmic protein [Mycobacterium sp. JDM601] gi|333486980|gb|AEF36372.1| ABC-type dipeptide transport system periplasmic component [Mycobacterium sp. JDM601] Length=552 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/538 (67%), Positives = 433/538 (81%), Gaps = 7/538 (1%) Query 23 VAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQV 82 + A +++AC+ + QIDY VDG L+TYNT +V GAASAG QAF+RTLTGFGYHGPDGQ+ Sbjct 19 LGAWSVSACTSATVDQIDYAVDGGLITYNTTSVTGAASAGPQAFSRTLTGFGYHGPDGQI 78 Query 83 VADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQA 142 VAD DFG++SVV +PL+LDYQI++ AVYSDG+P+TCDDLVLAWAAQSGRF GFDAA++A Sbjct 79 VADHDFGSISVVGRAPLVLDYQIAEAAVYSDGKPITCDDLVLAWAAQSGRFGGFDAASRA 138 Query 143 GYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSN 202 GY+DI +IEC G KKARVSF PDR++VD+ +LFTATS+MPSH++ D L +++T A+L N Sbjct 139 GYLDIEHIECRPGAKKARVSFFPDRNIVDYEELFTATSMMPSHILNDLLGLNITEAILGN 198 Query 203 NVSAVEQIARL---WNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWW 259 A E +A++ WN+TW L FPSSGPYKI+SVL+ GAVVLVAND WW Sbjct 199 EPPAEEVVAKIAHAWNTTWQLDANAD----LGHFPSSGPYKIDSVLEGGAVVLVANDLWW 254 Query 260 GTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLI 319 G K +T+R+TVWPQGADI DRVN R V+VVDVA GS+GS++TPD YQ +D PS GIEQLI Sbjct 255 GAKPVTRRVTVWPQGADIADRVNKRVVEVVDVATGSAGSVITPDDYQSSDSPSGGIEQLI 314 Query 320 FAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGR 379 FAP G LA+ RRA+ALC PRD IARDAGVP+ NSRL+ A DDA A+ EA+QF + Sbjct 315 FAPSGPLAEIPARRAVALCTPRDVIARDAGVPMVNSRLNTAMDDAFDQAENVPEAQQFAQ 374 Query 380 VDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALR 439 DP AARD LGG PLTVRIGY PN RLAA +G I+ +CAPAG+TV++V + GPQ+LR Sbjct 375 ADPNAARDTLGGKPLTVRIGYRGPNTRLAAVVGAISASCAPAGVTVTEVASEGIGPQSLR 434 Query 440 DGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPA 499 +G+IDVLLASTGG+TGSGS+GS MDAY+L SGNGNNLSGY N QIDGIISALAV+ADPA Sbjct 435 EGQIDVLLASTGGSTGSGSTGSSVMDAYELFSGNGNNLSGYHNDQIDGIISALAVTADPA 494 Query 500 ERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 + RLLAE+APVLW +MPTLPLYRQQRTLL S K Y V+ NPTRWGAGWNMDRWAL + Sbjct 495 DLVRLLAESAPVLWADMPTLPLYRQQRTLLSSKKTYGVAANPTRWGAGWNMDRWALQQ 552 >gi|108799245|ref|YP_639442.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119868361|ref|YP_938313.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|126434903|ref|YP_001070594.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|108769664|gb|ABG08386.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. MCS] gi|119694450|gb|ABL91523.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. KMS] gi|126234703|gb|ABN98103.1| extracellular solute-binding protein, family 5 [Mycobacterium sp. JLS] Length=549 Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/529 (68%), Positives = 420/529 (80%), Gaps = 2/529 (0%) Query 29 TACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDF 88 ++C G AA +DY VDGAL++YNTNTV GAAS G QAFAR LTGF YHGP+GQ+V D DF Sbjct 23 SSCGG-AAESVDYAVDGALLSYNTNTVAGAASGGPQAFARVLTGFNYHGPEGQIVGDHDF 81 Query 89 GTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIA 148 GT++VV +PL+LDYQI+D AVYSDG+PVTCDDLVLAWA+QSGRFP FDAA + GY D+A Sbjct 82 GTIAVVGRAPLVLDYQINDKAVYSDGKPVTCDDLVLAWASQSGRFPQFDAANRGGYSDVA 141 Query 149 NIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVE 208 +++C GQK+ARVSF PDR VD QLF+AT+LMPSHV+ADQL +DVT AL + V Sbjct 142 SVDCAPGQKRARVSFAPDRGFVDFGQLFSATALMPSHVLADQLGVDVTTALTKGDQPTVA 201 Query 209 QIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRI 268 +IA WN+TW+LKPG +DE +FPSSGPYK+ESV D+GAV LVAND+WWG K +T RI Sbjct 202 RIAEAWNTTWELKPGL-NDEDLKKFPSSGPYKLESVTDEGAVTLVANDKWWGAKPVTNRI 260 Query 269 TVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQ 328 TVWP+GADIQ+RVN + DVVD+AAGSSG+L P+ Y RTD PS+G+EQLIFAP+G LA Sbjct 261 TVWPRGADIQERVNEGAYDVVDIAAGSSGTLNMPEDYVRTDSPSSGVEQLIFAPRGPLAA 320 Query 329 SRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDA 388 RRALA C PRD IAR+A VPIANSRL+PA +DA A+ E QF +P AARDA Sbjct 321 PPARRALAFCTPRDVIARNADVPIANSRLNPADEDAFAAAEATGEVGQFTAANPNAARDA 380 Query 389 LGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLA 448 LG PLTVRIGY PNARLAAT+GTIA AC PAGI V D GP LR +IDVLLA Sbjct 381 LGNRPLTVRIGYQSPNARLAATVGTIARACEPAGIRVVDAAGPKVGPLTLRANEIDVLLA 440 Query 449 STGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEA 508 STGGA GSGS+GS A+DAY LH+GNGNNLSGY+NA++DGII +LAVS DP E ARL+ E Sbjct 441 STGGAPGSGSTGSSALDAYALHTGNGNNLSGYSNARVDGIIGSLAVSNDPKELARLIGEG 500 Query 509 APVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 AP+LW +MPTLPLYRQQRTLL S+KMYAV NPTRWGAGWNMDRW L+R Sbjct 501 APILWADMPTLPLYRQQRTLLTSSKMYAVIGNPTRWGAGWNMDRWRLSR 549 >gi|120403570|ref|YP_953399.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956388|gb|ABM13393.1| extracellular solute-binding protein, family 5 [Mycobacterium vanbaalenii PYR-1] Length=548 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/556 (65%), Positives = 425/556 (77%), Gaps = 12/556 (2%) Query 5 RRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQ 64 RRR T + + L+ L++C+ A +DY VDG LVTYNTNTV+GAASAG Q Sbjct 2 RRRATALTAVLA-----LIGGLGLSSCADDTADAVDYAVDGTLVTYNTNTVVGAASAGPQ 56 Query 65 AFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVL 124 AFAR LTGF YHGPDGQ+V D DFGT+SVV SPLILDY+I +AVYSDG+P+TCDD+VL Sbjct 57 AFARVLTGFNYHGPDGQIVGDHDFGTISVVGRSPLILDYEIKAEAVYSDGKPITCDDMVL 116 Query 125 AWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPS 184 AWA+QSGR+P FDAA++AGY DIA I+C GQKKARVSF PDR D+ QLF ATS+MPS Sbjct 117 AWASQSGRYPWFDAASRAGYADIATIDCAPGQKKARVSFAPDRGFTDYGQLFAATSMMPS 176 Query 185 HVIADQLHID---VTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKI 241 HV+AD L + VT AL +N+ VE+IA++WN+TW+L P D +FPSSGPYK+ Sbjct 177 HVVADVLGLGEGGVTTALQTNDGPVVERIAQVWNTTWNLAP----DLDLKKFPSSGPYKL 232 Query 242 ESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVT 301 +SV +DGAVVLVAND+WWGT +T RITVWP AD+QDRVN + DVVD+A GSSG+L Sbjct 233 DSVTEDGAVVLVANDKWWGTAPVTGRITVWPSSADMQDRVNEGAYDVVDIATGSSGTLNL 292 Query 302 PDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPAT 361 PD Y RTD PSAGIEQLIFAPQG LA RRALALC PRD IAR A +P+AN+RL+ AT Sbjct 293 PDDYVRTDSPSAGIEQLIFAPQGPLAAVPARRALALCTPRDVIARSAELPVANARLNAAT 352 Query 362 DDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPA 421 +DA A+ + +F +P AAR AL G PLTVRIGY PNARLAAT+GTIA ACAPA Sbjct 353 EDAYGAAESTPQVNEFAVANPDAARAALNGAPLTVRIGYQTPNARLAATVGTIAKACAPA 412 Query 422 GITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYA 481 GITV D + GP +LRD +IDVL+A TGGA GSGSSGS AMDAY LHSGNGNNL Y Sbjct 413 GITVEDAAAEGIGPLSLRDNEIDVLIAGTGGAAGSGSSGSSAMDAYTLHSGNGNNLPRYR 472 Query 482 NAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNP 541 N +ID II+ +AV++DP E ARLL EA P+LW +MPTLPLYRQQRTLL STKMYAVS NP Sbjct 473 NERIDAIIATMAVTSDPKELARLLGEAGPILWGDMPTLPLYRQQRTLLTSTKMYAVSGNP 532 Query 542 TRWGAGWNMDRWALAR 557 TRWGAGWNMDRW L++ Sbjct 533 TRWGAGWNMDRWKLSQ 548 >gi|145224396|ref|YP_001135074.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145216882|gb|ABP46286.1| extracellular solute-binding protein, family 5 [Mycobacterium gilvum PYR-GCK] Length=548 Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/539 (67%), Positives = 421/539 (79%), Gaps = 7/539 (1%) Query 22 LVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ 81 +V LT+C + A +DY VDG L +YNTNTV+GAASAG QAFAR LTGF YHGP+GQ Sbjct 14 VVGGLGLTSCGEATADSVDYAVDGVLTSYNTNTVVGAASAGPQAFARVLTGFSYHGPEGQ 73 Query 82 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ 141 +V D DFGT+SVV +PLILDY+I +AVYSDG+P+TCDD+VLAWA+QSGRFP FDAA++ Sbjct 74 IVGDHDFGTISVVGRTPLILDYEIKPEAVYSDGKPITCDDMVLAWASQSGRFPAFDAASR 133 Query 142 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHID---VTAA 198 +GY DIA IEC GQKKARVSF P+R+ D+ QLFTATS+MPSHV+ D L + VT A Sbjct 134 SGYADIAAIECAPGQKKARVSFAPERAFTDYGQLFTATSMMPSHVVGDVLGLGDGAVTTA 193 Query 199 LLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRW 258 LL+N++ A E+IA++WN+TW+L P D +FPSSGPYK++SV DGAVVLVAND+W Sbjct 194 LLNNDIPAAERIAQVWNTTWNLGP----DLDLKKFPSSGPYKLDSVTADGAVVLVANDKW 249 Query 259 WGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQL 318 WG K +T R+TVWP+ DIQDRVN + DVVD+AAGSSG+L PD Y RTD PSAGIEQL Sbjct 250 WGAKPVTDRVTVWPRSPDIQDRVNEGAYDVVDIAAGSSGTLNVPDDYVRTDAPSAGIEQL 309 Query 319 IFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFG 378 IFAP+G+LA RRALA C PRD IAR+A VP+ N+RL+ AT+DA+ A+ + +F Sbjct 310 IFAPEGALAAVPARRALAFCTPRDVIARNAEVPVVNARLTTATEDAIGSAELTPQINEFA 369 Query 379 RVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQAL 438 +P AAR ALG TPLTVRIGY PNARLAAT+GTIA ACAPAGITV D GP AL Sbjct 370 VANPDAARQALGNTPLTVRIGYQTPNARLAATVGTIAKACAPAGITVQDAANADTGPTAL 429 Query 439 RDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADP 498 RD +IDVL+ASTGGA GSGSSGS A+DAY LHSGNGNNL YAN +ID IIS LAV+ DP Sbjct 430 RDNQIDVLIASTGGAAGSGSSGSSAVDAYTLHSGNGNNLPRYANGRIDAIISTLAVTTDP 489 Query 499 AERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 E ARLL EA P+LW +MPTLPLYRQQRTLL STKM AV NPTRWGAGWNMDRW L+R Sbjct 490 KEFARLLGEAGPILWADMPTLPLYRQQRTLLTSTKMSAVIGNPTRWGAGWNMDRWKLSR 548 >gi|315444728|ref|YP_004077607.1| peptide ABC transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|315263031|gb|ADT99772.1| ABC-type dipeptide transport system, periplasmic component [Mycobacterium sp. Spyr1] Length=548 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/539 (67%), Positives = 420/539 (78%), Gaps = 7/539 (1%) Query 22 LVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ 81 +V LT+C + A +DY VDG L +YNTNTV+GAASAG QAFAR LTGF YHGP+GQ Sbjct 14 VVGGLGLTSCGEATADSVDYAVDGVLTSYNTNTVVGAASAGPQAFARVLTGFSYHGPEGQ 73 Query 82 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ 141 +V D DFGT+SVV +PLILDY+I +AVYSDG+P+TCDD+VLAWA+QSGRFP FDAA++ Sbjct 74 IVGDHDFGTISVVGRTPLILDYEIKPEAVYSDGKPITCDDMVLAWASQSGRFPAFDAASR 133 Query 142 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHID---VTAA 198 +GY DIA IEC GQKKARVSF P+R+ D+ QLFTATS+MPSHV+ D L + VT A Sbjct 134 SGYADIAAIECAPGQKKARVSFAPERAFTDYGQLFTATSMMPSHVVGDVLGLGDGAVTTA 193 Query 199 LLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRW 258 LL+N++ A E+IA++WN+TW+L P D +FPSSGPYK++SV DGAVVLVAND+W Sbjct 194 LLNNDIPAAERIAQVWNTTWNLGP----DLDLKKFPSSGPYKLDSVTADGAVVLVANDKW 249 Query 259 WGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQL 318 WG K +T R+TVWP+ DIQDRVN + DVVD+AAGSSG+L PD Y RTD PSAGIEQL Sbjct 250 WGAKPVTDRVTVWPRSPDIQDRVNEGAYDVVDIAAGSSGTLNVPDDYVRTDAPSAGIEQL 309 Query 319 IFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFG 378 IFAP+G+LA RRALA C PRD IAR+A VP+ N+RL+ AT+DA+ A+ + +F Sbjct 310 IFAPEGALAAVPARRALAFCTPRDVIARNAEVPVVNARLTTATEDAIGSAELTPQINEFA 369 Query 379 RVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQAL 438 +P AAR ALG TPLTVRIGY PNARLAAT+G IA ACAPAGITV D GP AL Sbjct 370 VANPDAARQALGNTPLTVRIGYQTPNARLAATVGAIAKACAPAGITVQDAANADTGPTAL 429 Query 439 RDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADP 498 RD +IDVL+ASTGGA GSGSSGS A+DAY LHSGNGNNL YAN +ID IIS LAV+ DP Sbjct 430 RDNQIDVLIASTGGAAGSGSSGSSAVDAYTLHSGNGNNLPRYANGRIDAIISTLAVTTDP 489 Query 499 AERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 E ARLL EA P+LW +MPTLPLYRQQRTLL STKM AV NPTRWGAGWNMDRW L+R Sbjct 490 KEFARLLGEAGPILWADMPTLPLYRQQRTLLTSTKMSAVIGNPTRWGAGWNMDRWKLSR 548 >gi|118469995|ref|YP_887282.1| extracellular solute-binding protein, family protein 5 [Mycobacterium smegmatis str. MC2 155] gi|118171282|gb|ABK72178.1| bacterial extracellular solute-binding protein, family protein 5 [Mycobacterium smegmatis str. MC2 155] Length=555 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/540 (66%), Positives = 425/540 (79%), Gaps = 7/540 (1%) Query 21 TLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDG 80 +L+A LT+C +A +IDY VDG L TYNTNTV GAAS+G QAFARTLTGF YHGPDG Sbjct 20 SLLAGVGLTSCGSGSAGEIDYAVDGTLTTYNTNTVAGAASSGPQAFARTLTGFAYHGPDG 79 Query 81 QVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAAT 140 QVVAD DFGT+SVV +PL+LDY I+D+AVYSDG+P+TCDD+VL WAAQSGRFPGFD+A+ Sbjct 80 QVVADHDFGTMSVVGRAPLVLDYVINDNAVYSDGKPITCDDMVLTWAAQSGRFPGFDSAS 139 Query 141 QAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHID---VTA 197 +AGY DI +++C GQK+ARVSF DR +D+ LF ATSLMPSHVIAD+L + V Sbjct 140 RAGYRDIGSVDCEPGQKRARVSFAQDRGFLDYGYLFAATSLMPSHVIADELGLGDGGVVT 199 Query 198 ALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDR 257 A N+++A+E IA+ WN+ WDLKP D RFPSSGPY+++SV +DG+VVLVAND+ Sbjct 200 AFRDNDLNAIENIAKAWNTIWDLKP----DIDLKRFPSSGPYRLDSVSEDGSVVLVANDK 255 Query 258 WWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQ 317 WWGT AIT ++TVWP+GADIQ+RVN S DVVD+A GSSG L PD Y TD PSAGIEQ Sbjct 256 WWGTPAITPKVTVWPRGADIQERVNEGSFDVVDIATGSSGLLNLPDDYVSTDTPSAGIEQ 315 Query 318 LIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQF 377 LIFAP+G L RRA+ALC PRD IAR+A +PIAN+RLSPA++DA + A+G AE +F Sbjct 316 LIFAPRGPLGAPDARRAVALCTPRDVIARNAEMPIANARLSPASEDAFSVAEGTAEGGRF 375 Query 378 GRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQA 437 +P AARDAL PLTVRIGY PNARLAA +G IA ACAPAGITV D +T GP A Sbjct 376 SVANPDAARDALDNRPLTVRIGYQTPNARLAAIVGAIAKACAPAGITVQDAGSETAGPIA 435 Query 438 LRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSAD 497 LR+ +ID LLASTGGA G+GSSGS A+DAY LH GNGNNL Y N +IDGII ALAV++D Sbjct 436 LRNNEIDALLASTGGAAGAGSSGSSAIDAYTLHVGNGNNLPNYNNERIDGIIDALAVTSD 495 Query 498 PAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 P E ARLL E AP+LW+++PTLPLYRQQRT+L S KMYAVS NPTRWGAGWNMDRW L++ Sbjct 496 PKELARLLGEGAPILWNDVPTLPLYRQQRTVLTSNKMYAVSGNPTRWGAGWNMDRWKLSK 555 >gi|169629962|ref|YP_001703611.1| hypothetical protein MAB_2878c [Mycobacterium abscessus ATCC 19977] gi|169241929|emb|CAM62957.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=558 Score = 617 bits (1592), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 309/556 (56%), Positives = 399/556 (72%), Gaps = 6/556 (1%) Query 2 APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASA 61 +P R RIA + + T L+AA LT+C SAA +DY VDG L TYN N+V G ASA Sbjct 5 SPARTGARRIARIGAIVTTVLLAAGLLTSCWTSAAKTLDYAVDGRLTTYNVNSVAGNASA 64 Query 62 GAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDD 121 GAQAF R LTGFG+HGPDGQV+AD DFGTV VV PL+LDY I++ AVYSDG+PVTC+D Sbjct 65 GAQAFNRVLTGFGFHGPDGQVIADHDFGTVEVVGRIPLVLDYTINEKAVYSDGKPVTCED 124 Query 122 LVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSL 181 +VL+W AQSGR P FD A+ AGY DI+ ++C GQK ARV+F PDR+ D +QLFTAT++ Sbjct 125 MVLSWFAQSGRMPDFDTASTAGYADISTVDCKPGQKTARVTFAPDRAFTDWTQLFTATTM 184 Query 182 MPSHVIADQL--HIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPY 239 +P HV+AD+L +ID+ A+ SN+V A+++IA WN+ W+L D S+FPSSGPY Sbjct 185 LPWHVVADKLGGNIDLVGAIASNDVPALQKIADFWNNQWNLD----TDLDLSKFPSSGPY 240 Query 240 KIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSL 299 K++ DDG+VVLVAND+WWG +TKR+TVWP G D+Q R+++ ++VVDVAAGS+G+L Sbjct 241 KLDGYNDDGSVVLVANDKWWGNPPVTKRVTVWPSGIDVQKRLSDGDLEVVDVAAGSAGTL 300 Query 300 VTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSP 359 PD + RT+ P +G+EQLIF GS+ RRA+ALC PRDAIA AGVP+ N+RL Sbjct 301 TAPDGFVRTEEPGSGVEQLIFGAGGSVGAPDLRRAVALCTPRDAIAGIAGVPVMNARLDT 360 Query 360 ATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACA 419 + D+ + AAEA +F R DP AAR A PLT+R+GY PN R AA + +A AC Sbjct 361 SIGDSFASVEAAAEAGRFMRSDPIAARAAAANRPLTLRVGYQAPNPRRAAIVSAMAQACE 420 Query 420 PAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSG 479 PAGITV DV+ GP +LRD ++D LL+S GG GSGS+GS MDAY L S G N + Sbjct 421 PAGITVQDVSSPETGPHSLRDNQVDALLSSIGGVPGSGSTGSWLMDAYALRSREGKNPAN 480 Query 480 YANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSR 539 YAN QIDGII+ALAV+ + +++RLL +A+ +LW+++PTLPLYRQ R L+ MYA + Sbjct 481 YANGQIDGIIAALAVTTNARDQSRLLGDASAILWNDLPTLPLYRQPRVLIAPKSMYAATP 540 Query 540 NPTRWGAGWNMDRWAL 555 + TRWGAGWNMDRW L Sbjct 541 SVTRWGAGWNMDRWVL 556 >gi|289751208|ref|ZP_06510586.1| conserved lipoprotein [Mycobacterium tuberculosis T92] gi|289691795|gb|EFD59224.1| conserved lipoprotein [Mycobacterium tuberculosis T92] Length=311 Score = 613 bits (1581), Expect = 3e-173, Method: Compositional matrix adjust. Identities = 309/310 (99%), Positives = 309/310 (99%), Gaps = 0/310 (0%) Query 248 GAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQR 307 GAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQR Sbjct 2 GAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQR 61 Query 308 TDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTD 367 TDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTD Sbjct 62 TDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTD 121 Query 368 ADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSD 427 ADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSD Sbjct 122 ADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSD 181 Query 428 VTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDG 487 VTVDTPGPQALRDGKIDVLLASTGGATGSGSSGS AMDAYDLHSGNGNNLSGYANAQIDG Sbjct 182 VTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSSAMDAYDLHSGNGNNLSGYANAQIDG 241 Query 488 IISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAG 547 IISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAG Sbjct 242 IISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAG 301 Query 548 WNMDRWALAR 557 WNMDRWALAR Sbjct 302 WNMDRWALAR 311 >gi|254775913|ref|ZP_05217429.1| hypothetical protein MaviaA2_14755 [Mycobacterium avium subsp. avium ATCC 25291] Length=561 Score = 551 bits (1420), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 273/356 (77%), Positives = 310/356 (88%), Gaps = 0/356 (0%) Query 27 TLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADR 86 TL C+GSAAA+IDYVVDG L +YN NTV+GAASAGAQAFARTL GF YHGPDGQ V DR Sbjct 27 TLAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAASAGAQAFARTLVGFSYHGPDGQTVPDR 86 Query 87 DFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVD 146 DFGTVSVV G+PL+LDYQI+D+AVYSDG+PVTCDD+VLAWAAQSGR+P F+AATQAGY+D Sbjct 87 DFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCDDIVLAWAAQSGRYPEFNAATQAGYLD 146 Query 147 IANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSA 206 IAN+EC GQKKARVSFIPDR +VD++QLFTAT+LMPSHVIADQL++DVTAALLS+N Sbjct 147 IANVECMPGQKKARVSFIPDRGIVDYNQLFTATTLMPSHVIADQLNVDVTAALLSHNAPL 206 Query 207 VEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITK 266 V QIARLWN+ WDLKPG +E+ RFPSSGPYK+++VLD GAVVLVANDRWWG KAITK Sbjct 207 VAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYKLQAVLDGGAVVLVANDRWWGPKAITK 266 Query 267 RITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSL 326 RITVWPQG DIQDRVNNRSVDVVDVAAGSSG+L TPD+Y R+D PS GIEQLIFAPQG L Sbjct 267 RITVWPQGPDIQDRVNNRSVDVVDVAAGSSGTLATPDNYDRSDAPSDGIEQLIFAPQGPL 326 Query 327 AQSRTRRALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDP 382 + + RRA ALC PRD +A+DAG PIANSRL PA DDA++ DGAAEA FG+ DP Sbjct 327 SAPKARRAFALCTPRDVLAKDAGTPIANSRLDPAVDDAVSAGDGAAEAAPFGKADP 382 >gi|254821450|ref|ZP_05226451.1| extracellular solute-binding protein, family protein 5 [Mycobacterium intracellulare ATCC 13950] Length=343 Score = 483 bits (1242), Expect = 5e-134, Method: Compositional matrix adjust. Identities = 245/316 (78%), Positives = 278/316 (88%), Gaps = 4/316 (1%) Query 22 LVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQ 81 LVA +TAC+GSAA+++DYVVDG L TYNTNTV GAASAGAQAFARTLTGF YHGP GQ Sbjct 32 LVAGFVVTACAGSAASELDYVVDGPLSTYNTNTVAGAASAGAQAFARTLTGFSYHGPGGQ 91 Query 82 VVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQ 141 +VADRDFGTVSVV G+PL+LDYQI+D+AVYSDG+P+TCDD+VLAWAAQSGRFP FDAATQ Sbjct 92 IVADRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPLTCDDIVLAWAAQSGRFPEFDAATQ 151 Query 142 AGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLS 201 GY+DIAN+EC GQKKARVSF+PDR VVD++QLFTATSLMPSHVIADQL++DVTAALLS Sbjct 152 GGYIDIANVECIPGQKKARVSFVPDRGVVDYNQLFTATSLMPSHVIADQLNVDVTAALLS 211 Query 202 NNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGT 261 +N V+QIA+LWN+ WDLKPG RFPSSGPYKI SVL+ GAVVLVANDRWWG Sbjct 212 HNAPLVQQIAKLWNTIWDLKPGVD----LKRFPSSGPYKIGSVLEGGAVVLVANDRWWGP 267 Query 262 KAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFA 321 +AITKRITVWPQG DIQDRVNNR+VDVVDVAAGSSG+L TPD+Y+R+D PS GIEQL FA Sbjct 268 RAITKRITVWPQGPDIQDRVNNRTVDVVDVAAGSSGTLATPDNYERSDAPSDGIEQLFFA 327 Query 322 PQGSLAQSRTRRALAL 337 PQG LA + RRA+AL Sbjct 328 PQGPLAAPKARRAVAL 343 >gi|466821|gb|AAA17096.1| B1177_C2_197 [Mycobacterium leprae] Length=426 Score = 475 bits (1223), Expect = 8e-132, Method: Compositional matrix adjust. Identities = 247/307 (81%), Positives = 271/307 (89%), Gaps = 4/307 (1%) Query 20 ATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPD 79 ATLVA+ LTACSGSAA +I YVVDGAL TYNTNT++GAASAGAQAFARTL GFGYHGPD Sbjct 31 ATLVASLALTACSGSAAGEIVYVVDGALGTYNTNTIVGAASAGAQAFARTLIGFGYHGPD 90 Query 80 GQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAA 139 GQ+VAD DFGT++VV G PL+LDYQI+D+AVYSDG+ VTCDDLVL WAAQSGRFPGFDAA Sbjct 91 GQIVADHDFGTITVVGGVPLVLDYQIADNAVYSDGKQVTCDDLVLTWAAQSGRFPGFDAA 150 Query 140 TQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAAL 199 TQAGY DIANIEC AGQKK+RV F+PDRSVVD+ QLF ATS+MPSHVIADQL+IDVT AL Sbjct 151 TQAGYRDIANIECLAGQKKSRVFFVPDRSVVDYEQLFAATSMMPSHVIADQLNIDVTEAL 210 Query 200 LSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWW 259 L++N + VEQIARLWN+TWDLKP ++R RFPSSGPYKIESVL+ GAVVLVANDRWW Sbjct 211 LTHNATLVEQIARLWNTTWDLKPAV---DLR-RFPSSGPYKIESVLNGGAVVLVANDRWW 266 Query 260 GTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLI 319 G KA TKRITV PQ ADIQDRVNNRSVDVVDVA GSSGSL TPD+Y R D PSAGIEQLI Sbjct 267 GLKATTKRITVRPQEADIQDRVNNRSVDVVDVAVGSSGSLATPDNYARIDSPSAGIEQLI 326 Query 320 FAPQGSL 326 FAPQG L Sbjct 327 FAPQGLL 333 >gi|289751209|ref|ZP_06510587.1| conserved lipoprotein [Mycobacterium tuberculosis T92] gi|289691796|gb|EFD59225.1| conserved lipoprotein [Mycobacterium tuberculosis T92] Length=213 Score = 424 bits (1090), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%) Query 1 VAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 +APRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS Sbjct 1 MAPRRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAAS 60 Query 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD Sbjct 61 AGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCD 120 Query 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS Sbjct 121 DLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATS 180 Query 181 LMPSHVIADQLHIDVTAALLSNNVSAVEQIARL 213 LMPSHVIADQLHIDVTAALLSNNVS VEQIARL Sbjct 181 LMPSHVIADQLHIDVTAALLSNNVSVVEQIARL 213 >gi|312139499|ref|YP_004006835.1| high affinity substrate-binding lipoprotein [Rhodococcus equi 103S] gi|311888838|emb|CBH48150.1| putative high affinity substrate binding lipoprotein [Rhodococcus equi 103S] Length=579 Score = 421 bits (1081), Expect = 2e-115, Method: Compositional matrix adjust. Identities = 242/551 (44%), Positives = 318/551 (58%), Gaps = 28/551 (5%) Query 31 CSGSAAAQI---DYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRD 87 CS Q+ Y +D + TYN NTV G+A+ Q+F R LTG Y GP G VAD D Sbjct 33 CSSEPTDQVPSLGYAIDNVVTTYNGNTVEGSATGALQSFGRVLTGMSYTGPSGAPVADTD 92 Query 88 FGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF--PG-------FDA 138 FGT SVV G L + Y+++ +VYSDG P++CDD VLAWAA SGRF PG FDA Sbjct 93 FGTASVVPGDSLTVQYRLNPSSVYSDGVPISCDDFVLAWAAGSGRFTRPGDSGPVSMFDA 152 Query 139 ATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-DVTA 197 AT+AGY DI ++C G K V F P R + LF AT LMP+HV A + D+ Sbjct 153 ATRAGYADIERVDCQPGAKDVTVVFSPGRGYLGWRSLFGATELMPAHVAAQAAGVPDLVG 212 Query 198 ALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDR 257 A+ S + AV +IA WN+ W L+PG D ++FPSSGPY+IES D +VLV N+R Sbjct 213 AIRSGDADAVGRIADFWNTGWRLEPG---DLELAKFPSSGPYRIESYTTDDGLVLVENER 269 Query 258 WWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQ 317 WWG K T RI VWP+G+D+Q ++ V+VVD+ AGS + PS +EQ Sbjct 270 WWGIKPQTSRIVVWPKGSDVQAGMDAGDVEVVDIGAGSLAGFEPDGGFDVAHEPSRSVEQ 329 Query 318 LIFAPQGSLAQSRTRRALALCVPRDAIARDAGVP-----------IANSRLSPATDDALT 366 + A QG RRA ALC+PR + + G P + +SR++ D Sbjct 330 FVLATQGVFGSPDARRAFALCLPRQRLYDELGHPGFDRADGIGSGVIDSRIT-GPDTLFY 388 Query 367 DADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVS 426 + AAE + D A AR+A G LTVR+GY P+ R A T+ +A++CA AGITV Sbjct 389 PSAVAAEGGTYTDPDIAGAREAAGQQQLTVRVGYLGPDERRARTVQIVAESCAGAGITVE 448 Query 427 DVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQID 486 D P ALR G++D +LA T A G+ + S A+ L +GNG+N G++N + D Sbjct 449 DAGSPDFSPTALRAGQVDAVLAGTASAAGAAGTDSIDDAAFALRTGNGDNFGGFSNRRFD 508 Query 487 GIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGA 546 ++ LAV A A R LL EA +LW+EMPT+PL+ Q RT+ S M+AV NPTR G+ Sbjct 509 QVVDQLAVDASLAARMSLLGEAEAILWNEMPTIPLFDQPRTIAHSKGMHAVVPNPTRSGS 568 Query 547 GWNMDRWALAR 557 GWNMDRW L R Sbjct 569 GWNMDRWILLR 579 >gi|325672611|ref|ZP_08152307.1| dipeptide ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325556488|gb|EGD26154.1| dipeptide ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length=579 Score = 418 bits (1075), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 239/551 (44%), Positives = 315/551 (58%), Gaps = 28/551 (5%) Query 31 CSGSAAAQI---DYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRD 87 CS Q+ Y +D + TYN NTV G+A+ Q+F R LTG Y GP G VAD D Sbjct 33 CSSEPTDQVPSLGYAIDNVVTTYNGNTVEGSATGALQSFGRVLTGMSYTGPSGAPVADTD 92 Query 88 FGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF---------PGFDA 138 FGT SVV G L + Y+++ +VYSDG P++CDD VLAWAA SGRF P FDA Sbjct 93 FGTASVVPGDSLTVQYRLNPSSVYSDGVPISCDDFVLAWAAGSGRFTRPGDSGPVPMFDA 152 Query 139 ATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-DVTA 197 AT+AGY DI ++C G K V F P R + LF AT LMP+HV A + D+ Sbjct 153 ATRAGYADIERVDCQPGAKDVTVVFSPGRGYLGWRSLFGATELMPAHVAAQAAGVPDLVG 212 Query 198 ALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDR 257 A+ S + AV +IA WN+ W L+PG D ++FPSSGPY+IES D +VLV N+R Sbjct 213 AIRSGDADAVGRIADFWNTGWRLEPG---DLELAKFPSSGPYRIESYTTDDGLVLVENER 269 Query 258 WWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQ 317 WWG K T RI VWP+G+D+Q ++ V+VVD+ AGS + PS +EQ Sbjct 270 WWGIKPQTSRIVVWPKGSDVQAGMDAGDVEVVDIGAGSLAGFEPDGGFDVAHEPSRSVEQ 329 Query 318 LIFAPQGSLAQSRTRRALALCVPRDAIARDAGVP-----------IANSRLSPATDDALT 366 + A QG RRA ALC+PR + + G P + +SR++ D Sbjct 330 FVLATQGVFGSPDARRAFALCLPRQRLYDELGHPGFDRADGIGSGVIDSRIT-GPDTLFY 388 Query 367 DADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVS 426 + AAE + D AR+A G L VR+GY P+ R A T+ +A++CA AGITV Sbjct 389 PSAVAAEGGTYTDPDIPGAREAAGQQQLNVRVGYLGPDERRARTVQIVAESCAGAGITVE 448 Query 427 DVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQID 486 D P ALR G++D +LA T A G+ + S A+ L +GNG+N G++N + D Sbjct 449 DAGSPDFSPTALRAGQVDAVLAGTASAAGAAGTDSIDDAAFALRTGNGDNFGGFSNRRFD 508 Query 487 GIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGA 546 ++ LAV A A R LL EA +LW+EMPT+PL+ Q RT+ S M+AV NPTR G+ Sbjct 509 QVVDQLAVDASLAARMSLLGEAEAILWNEMPTIPLFDQPRTIAHSKGMHAVVPNPTRSGS 568 Query 547 GWNMDRWALAR 557 GWNMDRW L R Sbjct 569 GWNMDRWILLR 579 >gi|229491974|ref|ZP_04385791.1| bacterial extracellular solute-binding protein, family protein 5 [Rhodococcus erythropolis SK121] gi|229321106|gb|EEN86910.1| bacterial extracellular solute-binding protein, family protein 5 [Rhodococcus erythropolis SK121] Length=576 Score = 407 bits (1045), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 234/558 (42%), Positives = 315/558 (57%), Gaps = 32/558 (5%) Query 27 TLTACSGSAAA--QIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVA 84 +L ACS SA I Y +D ++ TYN NT G+ S AF R L GF + GP G V+ Sbjct 24 SLAACSESAEQVPSIGYAIDNSISTYNANTTAGSVSGAMAAFGRVLPGFTFTGPAGAPVS 83 Query 85 DRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF---------PG 135 D D GT S + G L + Y+++ +VYSDG P++CDDLVL WAA SG+F P Sbjct 84 DTDIGTASELPGDVLTVSYKLNPASVYSDGIPMSCDDLVLTWAASSGKFTEDVDGAVKPM 143 Query 136 FDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-D 194 FD A GY DI I+C +G K A V F P RS D LF AT+LMPSHV+ + + D Sbjct 144 FDTANNLGYADIDRIDCQSGAKDATVFFKPGRSFTDWRSLFGATALMPSHVVTQRTGVSD 203 Query 195 VTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVA 254 V +A+ + + A+ +IA WN+ W+L PG+ V PS+GPY+I+S D +VLVA Sbjct 204 VVSAVNAGDTEALSKIADFWNTGWNLTPGQVDTSV---LPSAGPYRIDSYSTDDGLVLVA 260 Query 255 NDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAG 314 N+RWWG K T RI VWP+G ++ + ++ S++VVDVA+GS+G L TP + PS Sbjct 261 NERWWGNKPATDRIVVWPRGVNLTEDLDKNSIEVVDVASGSAGELGTPSGFDVQQIPSRS 320 Query 315 IEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVP-----------IANSRLSPATDD 363 IEQ + A GSL RRA A CVPR + G + +SRL D Sbjct 321 IEQFVLATSGSLGDEAARRAFAHCVPRTTLFEKFGQTENAPQAGLGSGVVDSRL--MAPD 378 Query 364 ALTDADGAA-EARQFGRVDPAAARDALGGT---PLTVRIGYGRPNARLAATIGTIADACA 419 +L +D AA + ++ D AA+ +L LTVR+GY P+ A + ACA Sbjct 379 SLVYSDAAAVDGDRYANADIEAAKTSLSEADLDQLTVRVGYLAPDPVRAQIVSEAKAACA 438 Query 420 PAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSG 479 PAGITV D + D+ P +L+ G +D +L+ G G+G + S L SGNG NL Sbjct 439 PAGITVEDASSDSFDPASLQSGGVDAVLSGMAGKVGAGGTASMIDARGALRSGNGANLGT 498 Query 480 YANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSR 539 Y NA+ID II L V A + + L EA +LW ++PT+PL+ Q RT+ ++ M AV Sbjct 499 YGNARIDQIIDQLNVDASTSAQLGLSVEAENILWTQVPTIPLFNQLRTVAVAPGMSAVLV 558 Query 540 NPTRWGAGWNMDRWALAR 557 NPTR GWNMDRW L R Sbjct 559 NPTRAATGWNMDRWVLRR 576 >gi|226306416|ref|YP_002766376.1| hypothetical protein RER_29290 [Rhodococcus erythropolis PR4] gi|226185533|dbj|BAH33637.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=576 Score = 405 bits (1040), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 232/558 (42%), Positives = 315/558 (57%), Gaps = 32/558 (5%) Query 27 TLTACSGSAAA--QIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVA 84 +L ACS SA I Y +D ++ TYN NT G+ S AF R L GF + GP G V+ Sbjct 24 SLAACSESAEQVPSIGYAIDNSISTYNANTTAGSVSGAMAAFGRVLPGFTFTGPAGAPVS 83 Query 85 DRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF---------PG 135 D D GT S + G L + Y+++ +VYSDG P++CDDLVL WAA SG+F P Sbjct 84 DTDIGTASELPGDVLTVSYKLNPASVYSDGIPMSCDDLVLTWAASSGKFTKDVDGAAKPM 143 Query 136 FDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-D 194 FD A GY DI I+C +G K A V F P RS D LF AT+LMPSH++ + + D Sbjct 144 FDTANNLGYADIDRIDCQSGSKDATVFFKPGRSFTDWRSLFGATALMPSHIVTQRAGVGD 203 Query 195 VTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVA 254 V +A+ + + A+ +IA WN+ W+L PG+ V PS+GPY+I+S D +VLVA Sbjct 204 VVSAVNAGDTDALSKIADFWNTGWNLTPGQVDTSV---LPSAGPYRIDSYSADDGLVLVA 260 Query 255 NDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAG 314 N+RWWG K T RI VWP+G ++ + ++ S++VVDVA+GS+G L TP + PS Sbjct 261 NERWWGNKPATDRIVVWPRGVNLTEDLDKNSIEVVDVASGSAGELGTPSGFDVQQIPSRS 320 Query 315 IEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVP-----------IANSRLSPATDD 363 IEQ + A GSL RRA A CVPR + G + +SRL D Sbjct 321 IEQFVLATSGSLGDEAARRAFAHCVPRTTLFEKFGQTENAPQAGLGSGVVDSRL--MAPD 378 Query 364 ALTDADGAA-EARQFGRVDPAAARDALGGT---PLTVRIGYGRPNARLAATIGTIADACA 419 +L +D AA + ++ D AA+ +L LTVR+GY P+ A + ACA Sbjct 379 SLVYSDAAAVDGDRYANADVDAAKTSLSEADLDQLTVRVGYLAPDPVRAQIVSEAKAACA 438 Query 420 PAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSG 479 PAGIT+ D + D+ P +L+ G +D +L+ G G+G + S L SGNG NL Sbjct 439 PAGITIEDASTDSFDPASLQSGGVDAVLSGMAGKVGAGGTASMIDARGALRSGNGANLGT 498 Query 480 YANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSR 539 Y NA+ID II L V A + + L EA +LW ++PT+PL+ Q RT+ ++ M AV Sbjct 499 YGNARIDQIIDQLNVDASTSAQLGLSVEAENILWTQVPTIPLFNQLRTVAVAPGMSAVLV 558 Query 540 NPTRWGAGWNMDRWALAR 557 NPTR GWNMDRW L R Sbjct 559 NPTRAATGWNMDRWVLRR 576 >gi|226366286|ref|YP_002784069.1| hypothetical protein ROP_68770 [Rhodococcus opacus B4] gi|226244776|dbj|BAH55124.1| hypothetical protein [Rhodococcus opacus B4] Length=578 Score = 403 bits (1035), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 249/585 (43%), Positives = 331/585 (57%), Gaps = 54/585 (9%) Query 7 RHTRIAGLRVVGT-ATLVAATTLTACS--GSAAAQIDYVVDGALVTYNTNTVIGAASAGA 63 RH R A + G AT++ A TL C+ G I Y +D + TYN NTV GA S Sbjct 14 RHGRTAAVSGAGLLATVLLAGTLVGCAEEGEQIPSIGYAIDNTVTTYNANTVAGAVSGAR 73 Query 64 QAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLV 123 QAFAR L GF Y GP+G VAD D GT + V G L + Y+++ ++VYSDG P++CDDLV Sbjct 74 QAFARVLPGFNYTGPEGGPVADTDIGTANAVPGDALTIQYKLNPNSVYSDGVPMSCDDLV 133 Query 124 LAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMP 183 L WAA SGRFP FDAA+ AGY DI I+C G K A V+F R+V D LF ATS+MP Sbjct 134 LTWAANSGRFPMFDAASTAGYTDIDRIDCQTGAKDAVVTFKAGRNVTDWKSLFGATSMMP 193 Query 184 SHVIADQLHI-DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIE 242 +HV A + D+ +A+ +++ +A+ ++A WN W + PG D + FP+SGPYK+E Sbjct 194 AHVAATATGVPDIVSAVQNSDTAALTRVADFWNDGWTMTPG---DLDLALFPASGPYKVE 250 Query 243 SVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTP 302 S D +VLVANDRWWG + T RI VWP+ +D+ R+ + SV+VVDVAAGS P Sbjct 251 SFSADEGLVLVANDRWWGNRPATSRIVVWPKSSDVSARIGDGSVEVVDVAAGS-----VP 305 Query 303 D----SYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLS 358 D + T+ S +EQ + + G + RRA A C+PR+ +A G+P Sbjct 306 DLDLGGFDVTEVASRSVEQFVLSTSGLFENAAGRRAFASCLPREDLASKFGLP------- 358 Query 359 PATDDALTDADGAAEARQFG-RVDPA------AARDALGG-------------------T 392 A DADGAA A RV P + A+ G T Sbjct 359 -----AEPDADGAAPAGPVDTRVTPTDSLVHQSVAGAVAGRYETADTAAATAALADTDNT 413 Query 393 PLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGG 452 TVRIGY PN R A + +A ACAPAGITV D P LR G++DV+LA T Sbjct 414 TATVRIGYLGPNPRRAEIVSAVAAACAPAGITVQDAASPEFTPSMLRSGQVDVVLAGTAS 473 Query 453 ATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVL 512 A G+ + + Y L SGNG+N Y+N+++D I+ LAV A + L EA +L Sbjct 474 APGAAGTAAATTAMYALRSGNGSNFGDYSNSRVDQIVDQLAVDDTTATQLSLSTEAENIL 533 Query 513 WDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 W ++PT+PL+ Q RT+ ++ + A + NPTR GAGWNMDRW L R Sbjct 534 WSDVPTVPLFDQPRTVAFASGLQAGTVNPTRSGAGWNMDRWVLRR 578 >gi|111023850|ref|YP_706822.1| dipeptide-binding protein [Rhodococcus jostii RHA1] gi|110823380|gb|ABG98664.1| possible dipeptide-binding protein [Rhodococcus jostii RHA1] Length=578 Score = 402 bits (1032), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 240/571 (43%), Positives = 331/571 (58%), Gaps = 23/571 (4%) Query 4 RRRRHTRIAGLRVVGTATLVAATTLTACS--GSAAAQIDYVVDGALVTYNTNTVIGAASA 61 RR R ++G ++ AT++ A +L CS G I Y +D + TYN N+V GA S Sbjct 14 RRGRTAAVSGAGLL--ATVLLAGSLVGCSEEGEQIPSIGYAIDNTITTYNGNSVAGAVSG 71 Query 62 GAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDD 121 QAFAR L GF Y GP+G VAD D GT + + G L + Y+++ ++VYSDG P++CDD Sbjct 72 ARQAFARVLPGFNYTGPEGGPVADTDIGTANAMPGDALTIQYKLNPNSVYSDGVPMSCDD 131 Query 122 LVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSL 181 LVL WAA SGRFP FDAA+ AGY DI I+C G K A V+F R+ D LF ATS+ Sbjct 132 LVLTWAANSGRFPMFDAASTAGYSDIDRIDCQTGSKDAVVTFKAGRNFTDWKSLFGATSM 191 Query 182 MPSHVIADQLHI-DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 MP+HV+A + DV AA+ +++ A+ ++A WN+ W + PG D ++FP+SGPYK Sbjct 192 MPAHVVASAAGVPDVVAAVQNSDAEALTRVADFWNNGWTMAPG---DLDLAKFPASGPYK 248 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV 300 +ES +D +VLVANDRWWG + T RI VWP+ +D+ R+ + SV+VVDVAAGS+ L Sbjct 249 VESFSEDEGLVLVANDRWWGNRPATSRIVVWPKSSDVSARIGDGSVEVVDVAAGSAPDL- 307 Query 301 TPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAGVPIANSRLSPA 360 + T+ PS +EQ + + G + RRA A C+PR+ +A G+ + A Sbjct 308 DLGGFDVTEVPSRSVEQFVLSTSGLFENAAGRRAFAACLPREELASKFGIAAESDEAGGA 367 Query 361 T----DDALTDADGAAEARQFGRV----------DPAAARDALGGTPLTVRIGYGRPNAR 406 + D +T D G V A G T TVR+GY PN R Sbjct 368 SGGPVDTRVTAPDSLVHQTVAGAVGGRYETADTAAATDALADTGNTSATVRVGYLGPNPR 427 Query 407 LAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDA 466 A + +A ACAPAGITV DV P LRDG++DV+LA T A G+ + + Sbjct 428 RAEIVAAVAAACAPAGITVQDVASPEFTPSMLRDGQVDVVLAGTASAPGAAGTAAATTAM 487 Query 467 YDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQR 526 Y L SG +N Y+N ++D I+ L+V + A + L EA +LW ++PT+PL+ Q R Sbjct 488 YALRSGIRSNFGDYSNGRVDQIVDQLSVDSLTATQLSLSTEAENILWSDVPTVPLFDQPR 547 Query 527 TLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 T+ +T + A + NPTR GAGWNMDRW L R Sbjct 548 TVAFATGLQAGAVNPTRSGAGWNMDRWVLHR 578 >gi|54025659|ref|YP_119901.1| hypothetical protein nfa36890 [Nocardia farcinica IFM 10152] gi|54017167|dbj|BAD58537.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=571 Score = 374 bits (959), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 229/578 (40%), Positives = 306/578 (53%), Gaps = 35/578 (6%) Query 7 RHTRIAGLRVVG--TATLVAATTLTACSG-SAAAQIDYVVDGALVTYNTNTVIGAASAGA 63 R R +R+ G TA +AA +T CSG S + Y VD + TYN + +G +S A Sbjct 2 RQPRSVAVRLAGACTALALAAGPVTGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGSA 61 Query 64 QAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLV 123 F R LTGF Y GP+GQ VAD D GT V G + Y+++ D VYSDG P +CDDLV Sbjct 62 AVFQRVLTGFFYTGPEGQQVADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDLV 121 Query 124 LAWAAQSGRF---------PGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQ 174 L WAA+SGRF P FDAA+ AGY DI ++C G K A V F P + Sbjct 122 LTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCEPGSKDATVVFRPGARYLPWRT 181 Query 175 LFTATSLMPSHVIADQLHI-DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRF 233 LF A LMP+HV A + +V + + S + +A++++A WN+ W+L G D SRF Sbjct 182 LFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTG---DLDLSRF 238 Query 234 PSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAA 293 PSSGPY+IES +VLVAN+RWWG A T R+ V+ + D++ ++ + +V V+D+ A Sbjct 239 PSSGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGA 298 Query 294 GSSGSLVTPD----SYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAG 349 GS PD + + P G EQL+ A G L RRA A CVPR A+ D G Sbjct 299 GS-----IPDLDLAGFTASTVPGRGAEQLVLATGGVLGSVEARRAFARCVPRQALYNDLG 353 Query 350 ----VPIANSRLSP-----ATDDALTDADGAAEARQFGRVDPAAARDALGGTP-LTVRIG 399 +P P D+L A + D A AR GTP T+RIG Sbjct 354 KAAEIPSTGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARAGFAGTPNPTIRIG 413 Query 400 YGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSS 459 Y P+ R A T+ IA++C AGITV D P L +G +D +LASTG G S Sbjct 414 YLSPDDRRAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGS 473 Query 460 GSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTL 519 + + A L +GNG + + N + D I LA D A + LL EA +LW EMP++ Sbjct 474 LTGTVAAAALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSI 533 Query 520 PLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 PL+ RT+ ++ PT+ G GWNMDRW L R Sbjct 534 PLFATPRTIAFGNGLHNGVAGPTQGGTGWNMDRWVLRR 571 >gi|333919488|ref|YP_004493069.1| ABC transporter substrate-binding protein [Amycolicicoccus subflavus DQS3-9A1] gi|333481709|gb|AEF40269.1| ABC superfamily ATP binding cassette transporter, binding protein [Amycolicicoccus subflavus DQS3-9A1] Length=578 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 215/580 (38%), Positives = 298/580 (52%), Gaps = 41/580 (7%) Query 5 RRRHTRIAGLRVVGTATLVAATTLTACSGS---AAAQIDYVVDGALVTYNTNTVIGAASA 61 RR IAGL VV T +L +C+ S + Y VD + TYN NTV GA SA Sbjct 8 RRTKAGIAGLAVVATTG-----SLASCATSDPLREVTLGYAVDAPITTYNANTVTGALSA 62 Query 62 GAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDD 121 G F R LTG Y GP+G + DRDFGT+ + G I D+AV+SDG P+TCDD Sbjct 63 GPAIFGRVLTGLSYPGPEGAPLEDRDFGTIEQIAGEAFTFQVTIRDEAVFSDGEPITCDD 122 Query 122 LVLAWAAQSGRF-----------PGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVV 170 LVLAWAA SGRF P FDAA+ G+ D+ N+ C G K+ARV R Sbjct 123 LVLAWAAGSGRFTVDDPDSEETRPLFDAASDWGFADVENVACEPGTKQARVELRAGRPFT 182 Query 171 DHSQLFTATSLMPSHVIADQLHI-DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEV 229 D LF+AT++MPSHV + D+ A+ S ++ A+ ++A WN+ W L+PG Sbjct 183 DWRALFSATTVMPSHVAGRAADVPDIVGAVASEDLDALGRLAEFWNTGWTLEPGALD--- 239 Query 230 RSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVV 289 S +PSSGPY IES ++ ++L N +WWG T RI VW G +I+D V VV Sbjct 240 LSLYPSSGPYMIESFSEENGLILERNPQWWGEPPRTPRIAVW-TGREIRDAVARDDAHVV 298 Query 290 DVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARDAG 349 DV AGS L + P+ IEQLIF +G RRA CVPR IA D Sbjct 299 DVGAGSVAGLDL-GGFTEQLVPALNIEQLIFNTRGIFGNVDARRAFTACVPRQRIADDIV 357 Query 350 V--------------PIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLT 395 P+A+SR+ P G A+ + + + D AAR Sbjct 358 APVYEDSANLGERYGPVASSRVVPVGAAGYDFIAGPAQ-QAYLQPDIEAARAFPELDGAR 416 Query 396 VRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGP-QALRDGKIDVLLASTGGAT 454 +R+GY P+ R + +A C+ AGI V +V+ P +A++ G++D+++ +GG Sbjct 417 IRVGYTGPDRRREEIVSFLARTCSEAGIIVQNVSSPAFDPSEAMQAGEVDIVVGGSGGVQ 476 Query 455 GSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWD 514 G G S LHS + N+ ++ +DG+I+ LA++ R LAEA ++W Sbjct 477 GPGGLRSAGAQLVTLHSRSPLNIGAFSFEALDGVIAELAITGQQDARFERLAEAERIMWG 536 Query 515 EMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWA 554 E+P++PL Q R + V N ++ GAGWNMD+WA Sbjct 537 ELPSVPLSVQPRVTAHDDVVVGVVPNGSKAGAGWNMDKWA 576 >gi|317508685|ref|ZP_07966340.1| extracellular solute-binding protein, family 5 [Segniliparus rugosus ATCC BAA-974] gi|316253006|gb|EFV12421.1| extracellular solute-binding protein, family 5 [Segniliparus rugosus ATCC BAA-974] Length=554 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 200/524 (39%), Positives = 280/524 (54%), Gaps = 20/524 (3%) Query 39 IDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVS--VVEG 96 ++Y +D L TYN NTV+G ++ AF+R L GF Y P G VAD D G +G Sbjct 40 VNYFIDAKLPTYNANTVLGRSNGTLMAFSRVLPGFSYPAPTGGSVADSDIGAAEPQTGQG 99 Query 97 SPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQ 156 + Y + A +SDG +TC+DLVLAWAA SGR PG A++ GY I+ ++C G Sbjct 100 EEFTVRYTFNPKATWSDGVAMTCEDLVLAWAALSGRLPGAQPASKLGYELISQMQCEKGS 159 Query 157 KKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDVTAALLSNNVSAVEQIARLWNS 216 K A F +R D LF +++PSHV+A + +DV A+ S++ + ++ + WN Sbjct 160 KTATAVF--ERHFPDWPSLFGPGTILPSHVLAKAVGVDVAGAMGSDDRAKLQAAGKFWNE 217 Query 217 TWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQGAD 276 W G D+ +RFPSSGPY+I+S G LV N RWWG A ++ +WP+G Sbjct 218 GWSF--GAKFDQ--ARFPSSGPYQIQST-GSGPTTLVRNPRWWGDPARIPKVAIWPKGF- 271 Query 277 IQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALA 336 R V+D+ GS G L P S GIEQ + +G+ AQ R R A A Sbjct 272 ---RPPVAGAQVIDIGKGSLGELRLPSGMSERTVRSLGIEQFVLLLRGAFAQKRAREAFA 328 Query 337 LCVPRDAIARDAG--VPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARD-ALGGTP 393 LC+PR +A G P+A+ LS + D A A Q ARD A G P Sbjct 329 LCLPRAELAARFGDNEPLASGALSSSQDPWQLSASQPARYAQPNAAAAYQARDSAAKGQP 388 Query 394 LTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGA 453 LTVR+GY P+AR AA + +ADAC PAGI V D + + P A G+ DVLL S+ A Sbjct 389 LTVRVGYLAPDARRAALVKAVADACDPAGIRVEDKSNEF-DPLAPAKGQFDVLLTSSDLA 447 Query 454 TGSGSSGSCAM---DAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAP 510 TG+G + + A + G G NLSGY +A+ D +++ LA++ +R LLA A Sbjct 448 TGAGGAAGPSWGLASAAQVREGEGENLSGYQSARTDDLVAQLALAEKEDDRIGLLARAQD 507 Query 511 VLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWA 554 +WD++P +PL+ R+++ S + V T GWNMDRW+ Sbjct 508 AVWDDLPMIPLFAAPRSVVWSETLSGVQPGATACATGWNMDRWS 551 >gi|296393865|ref|YP_003658749.1| family 5 extracellular solute-binding protein [Segniliparus rotundus DSM 44985] gi|296181012|gb|ADG97918.1| extracellular solute-binding protein family 5 [Segniliparus rotundus DSM 44985] Length=548 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 210/556 (38%), Positives = 298/556 (54%), Gaps = 20/556 (3%) Query 7 RHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAF 66 R +R A A L+ T A ++Y +D L TYN NT +G +S AF Sbjct 2 RLSRPAARIATALAVLLCCATGCGFFHKQAEVVNYFIDAKLPTYNANTALGRSSGALMAF 61 Query 67 ARTLTGFGYHGPDGQVVADRDFGTVSVV--EGSPLILDYQISDDAVYSDGRPVTCDDLVL 124 AR L GF Y P G VAD D G+ + +G + Y + AV+SDG P+TCDDLVL Sbjct 62 ARVLPGFSYPSPTGSSVADADVGSAEPLAGQGEEFTVRYTFNPKAVWSDGVPMTCDDLVL 121 Query 125 AWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPS 184 AWAA +GR PG A++AGY I N++C AG K A F +R S LF +++PS Sbjct 122 AWAALAGRLPGAVPASKAGYELITNMQCAAGSKTATAVF--ERHFPGWSGLFGPGTILPS 179 Query 185 HVIADQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESV 244 HV+A + V A+ S + + ++ + WNS WD G+ ++FP+SGPY+I+S Sbjct 180 HVLAKAARLRVVDAVSSADQARLQAAGKFWNSGWDFT-GKFD---AAKFPASGPYRIQSA 235 Query 245 LDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDS 304 D G LV N+RWWG A T ++ +WP+G R V+D+ GS L P Sbjct 236 -DAGRATLVRNERWWGESARTPKVEIWPKGF----RPPVAGAQVIDIGKGSIAQLALPSG 290 Query 305 YQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIAR---DAGVPIANSRLSPAT 361 + S GIEQ + + +G+ A R R A ALC+PR ++A DAG P A S Sbjct 291 LREKTVRSLGIEQFVLSLRGTFAAKRAREAFALCLPRASLAAQFGDAGAPAAGELSSSQD 350 Query 362 DDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPA 421 L+ A A + A + G P+TVR+GY P+AR AA + +A +C PA Sbjct 351 PWQLSPAQPARYVQPDAAAAYRAREEVSKGKPITVRVGYLAPDARRAALVAAVAQSCDPA 410 Query 422 GITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMD---AYDLHSGNGNNLS 478 G+ V D + D AL G++DVLL S+ ATG+G + D A + + G N+S Sbjct 411 GVRVLDSSKDF-NLLALESGQLDVLLTSSDLATGAGGAAGPTWDLTAAAQVRTEEGENVS 469 Query 479 GYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVS 538 GYA++Q+D +I LA++ ER LLA+A +W+++P +PL+ Q R+L S + V Sbjct 470 GYASSQLDDLILRLALTEKEDERIVLLAQAQEAIWEDLPVIPLFAQPRSLWWSEDLRGVV 529 Query 539 RNPTRWGAGWNMDRWA 554 N T GAGWNM+RW+ Sbjct 530 PNATASGAGWNMERWS 545 >gi|466812|gb|AAA17087.1| dciAE [Mycobacterium leprae] Length=344 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 179/229 (79%), Positives = 195/229 (86%), Gaps = 4/229 (1%) Query 333 RALALCVPRDAIARDAGVPIANSRLSPATDDALTDADGAAEARQFGRVDPAAARDALGGT 392 RALALC PRD +ARDAG+ IANSRLSPAT+DA+ ADGA EA QF + DPAAA DAL G Sbjct 116 RALALCTPRDVVARDAGLSIANSRLSPATEDAIAAADGAREAGQFSKADPAAAHDALSGE 175 Query 393 PLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTP----GPQALRDGKIDVLLA 448 L VRIGY PNARLAAT+GTIA ACA AGI+VS VT+D+ GPQALRDGKIDVLLA Sbjct 176 TLPVRIGYQGPNARLAATVGTIAKACAVAGISVSSVTLDSSTDPSGPQALRDGKIDVLLA 235 Query 449 STGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEA 508 STGGATGSGSSGS +MDAYDLH+GNGNNLSGYANAQ+D I ALAVSADPAER RLLA++ Sbjct 236 STGGATGSGSSGSSSMDAYDLHTGNGNNLSGYANAQVDNNIGALAVSADPAERVRLLADS 295 Query 509 APVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALAR 557 APVLW +MPTLPLYRQQR LLMS MYAV+RNPTRWGAGWNMDRWAL R Sbjct 296 APVLWADMPTLPLYRQQRMLLMSKTMYAVTRNPTRWGAGWNMDRWALVR 344 >gi|343924322|ref|ZP_08763873.1| hypothetical protein GOALK_014_00220 [Gordonia alkanivorans NBRC 16433] gi|343765756|dbj|GAA10799.1| hypothetical protein GOALK_014_00220 [Gordonia alkanivorans NBRC 16433] Length=571 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 215/576 (38%), Positives = 293/576 (51%), Gaps = 34/576 (5%) Query 4 RRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGA 63 R R R L +VG T A+ LTAC IDYVVD + +YN NTV G A Sbjct 4 RHREFIRALSL-LVGIVT--GASVLTACGDDGPPTIDYVVDAHVTSYNANTVDGNADGVL 60 Query 64 QAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLV 123 A +R L GF GP GQV+ DRD GTV+ + G L Y+ + +A ++D + CDDLV Sbjct 61 MATSRLLPGFSLLGPQGQVIPDRDVGTVTPIPGRAPALRYEFTPEAAFTDEVALDCDDLV 120 Query 124 LAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMP 183 LAWAA SGRFPGF AT AGY DI +EC+ G+K A V+F R + LF A +L+P Sbjct 121 LAWAAMSGRFPGFTPATTAGYRDIEKVECSPGEKSATVTFAQGREYRNWLSLFGAGTLLP 180 Query 184 SHVIA-DQLHIDVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIE 242 +H++A D +V A+ + + A+ +IA WN+ +DL G +RFPSSGPY+I+ Sbjct 181 AHIVARDAGLANVVDAIRAMDRGALARIATAWNTGFDLTFGPVD---HARFPSSGPYRID 237 Query 243 SVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAG-SSGSLVT 301 G +VL+ N+ WWG K T RI +W +G D R+ + DVVDV AG G L Sbjct 238 RYSRSGGLVLIPNESWWGNKPETSRIVIWGRGTDSTRRLPDGKFDVVDVTAGIVEGDLAG 297 Query 302 PDSYQRTDYP--SAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARD--AGVPIANSR- 356 P + G+EQ++ A +G R R+A A CVPR +ARD G + N R Sbjct 298 TSGPDGPASPARAIGVEQIVLAGKGVFGDVRMRQAFASCVPRADLARDFSGGAAVWNLRV 357 Query 357 LSPATDDALTDADGAAEARQFGRVDPAAARDAL---------GGT-------PLTVRIGY 400 L+PA D L R + D AR+ L GT P VRIGY Sbjct 358 LAPA--DNLAGPMNPEFGRAYQSPDLERARNLLRAATGQGAADGTTTTASLQPRRVRIGY 415 Query 401 GRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGK-IDVLLASTGGATGSGSS 459 P R + IA +C AG V DV P++L GK +D ++ ++G + + + Sbjct 416 VAPTLRWQQMVAAIAASCREAGFVVEDVATPDVQPRSL--GKDVDAVIMASGDSFAAAGA 473 Query 460 GSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTL 519 + DAY L G+ NLSG + Q+ I AV+ +R RL W MP++ Sbjct 474 ADPSRDAYSLRGGDPLNLSGTRDQQVSRGIDQFAVTVSEPDRLRLARSIENASWSSMPSI 533 Query 520 PLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 PL+ R ++ V +R G GWNMDRW + Sbjct 534 PLFASPRIRQWKDQVGGVKAGLSRAGTGWNMDRWTI 569 >gi|326382132|ref|ZP_08203824.1| extracellular solute-binding protein family 5 protein [Gordonia neofelifaecis NRRL B-59395] gi|326198862|gb|EGD56044.1| extracellular solute-binding protein family 5 protein [Gordonia neofelifaecis NRRL B-59395] Length=566 Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 204/545 (38%), Positives = 289/545 (54%), Gaps = 24/545 (4%) Query 31 CSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGT 90 C G + +DY+VD + +YN NTV G A A +R L GF GPDGQ++ADRD GT Sbjct 26 CGGDDRSDVDYLVDARVSSYNVNTVDGHADGALMALSRVLPGFNIVGPDGQIIADRDIGT 85 Query 91 VSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANI 150 V+ G L L Y + AVYSDG +TCDDL LA A SG PGF AAT AGY DIA++ Sbjct 86 VTPQPGGGLTLRYDFNPAAVYSDGTKLTCDDLFLAATAMSGTTPGFAAATNAGYRDIASV 145 Query 151 ECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-DVTAALLSNNVSAVEQ 209 +C G+ A V+F R ++LF A +L+P+HV+A + +V + S + +A+ + Sbjct 146 DCRPGESSATVAFAKGREYGQWNELFGAGTLLPAHVVARLAGVPNVVDPIRSGDKAAIAK 205 Query 210 IARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRIT 269 I + WN+ +D+ PG + DE F S+GPY++ES DG + L+ ND+WWG + + IT Sbjct 206 IVKAWNTAFDMLPGAAIDE--KTFVSAGPYRVESYSVDGGLKLIENDKWWGARPTSDTIT 263 Query 270 VWPQGADIQDRVNNRSVDVVDVAAGSSG-------SLVTP-DSYQRTDYPSAGIEQLIFA 321 VWP+G D ++ V+D A + G S TP D + + QL+F Sbjct 264 VWPRGTDGDTALDGSKATVIDTADLALGDRVSGRASATTPVDRSTLRETAPLSVTQLVFE 323 Query 322 PQGSLAQSRTRRALALCVPRDAIARDAGVP-IANSRLSPATDDALTDADGAAEARQFGRV 380 +G A R+ALA C+PRD++AR G I + + + D L + R++ R Sbjct 324 GRGVAADPLVRKALASCMPRDSLARRYGANGIVWNLRTASPSDPLGPSLNVQYGRRYPRS 383 Query 381 DPAAARDALGGTPL---------TVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVD 431 D A+D L + TVRIGY + A + I+DAC PAG T+ DV+ Sbjct 384 DVPRAKDLLSQRAVSDTGRRAKPTVRIGYLAKSPENADVVKMISDACTPAGFTIEDVSSP 443 Query 432 TPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISA 491 +L +D LL S G S S+ S +A+ L+ G+ NLS + NAQ+ I+A Sbjct 444 ELSVNSL-GTDVDALLLSDGSFAAS-STASGFPEAFALYGGDPLNLSKFRNAQVSEAITA 501 Query 492 LAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMD 551 LA + + R LL V WDE+PT+PLY R S + V G GWNMD Sbjct 502 LAATRSDSARLPLLRTIETVAWDELPTIPLYGTVRARESSLVTHVVPGLGVS-GTGWNMD 560 Query 552 RWALA 556 RW ++ Sbjct 561 RWGVS 565 >gi|262202236|ref|YP_003273444.1| extracellular solute-binding protein family 5 protein [Gordonia bronchialis DSM 43247] gi|262085583|gb|ACY21551.1| extracellular solute-binding protein family 5 [Gordonia bronchialis DSM 43247] Length=555 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 208/543 (39%), Positives = 288/543 (54%), Gaps = 13/543 (2%) Query 20 ATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPD 79 A AA LTAC +DY+VD + TYN NTV G A R L GF G Sbjct 17 AVAFAAGLLTACGDDGPPTVDYLVDARITTYNANTVSGNADGALMVTGRLLPGFSLLGAA 76 Query 80 GQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAA 139 GQV+ DRD G+V+ ++G L L Y+ +A +SDG + CDDL+LAWAA SGRF GF A Sbjct 77 GQVIPDRDVGSVTRLDGDRLTLRYEFVPEAAFSDGVALDCDDLLLAWAAMSGRFRGFTPA 136 Query 140 TQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI-DVTAA 198 T AGY DI ++EC AG++ A V+F P R D + LF A +++P+HV+A I DV Sbjct 137 TTAGYRDIDSVECAAGERTATVTFKPGRDYRDWASLFGAGTMLPAHVVAHDAGIADVIDP 196 Query 199 LLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRW 258 + + N + + +IA+ WN + L PG DE +R PSSGPY+++ +VLVAND+W Sbjct 197 IRAGNDAVIARIAKAWNEGFPLVPG-PVDE--TRLPSSGPYRVDRYSRTDGLVLVANDKW 253 Query 259 WGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPSAGIEQL 318 WG + T RI VW +G D R+ D+ DV AG V + +E+L Sbjct 254 WGERPKTARIVVWGRGTDATRRLPEGRFDIADVTAGMIDGDVAGTHGAANPARALAVEEL 313 Query 319 IFAPQGSLAQSRTRRALALCVPRDAIAR--DAGVPIANSR-LSPATDDALTDADGAAEAR 375 + A +G R R+A A C+PR+ +AR G + N R L+PA D L R Sbjct 314 VLATRGVFGDVRVRQAFASCMPREGLARRFGQGARMWNQRLLAPA--DNLAGQINNDFGR 371 Query 376 QFGRVDPAAARDAL---GGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDT 432 + R DPA AR L G +TVRIGY P AR + IA+ACA AGITV D + D Sbjct 372 AYQRPDPARARALLEQHGSAKVTVRIGYVAPTARWQQMVAAIAEACAGAGITVVDASSDR 431 Query 433 PGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISAL 492 P L +D L+ + G + + + A DAY L G+ +L G+ + Q+ I L Sbjct 432 IAPGDL-GTSLDALVVAGGTSFAAAGAADPARDAYSLRGGDPADLGGFRDPQVSRAIDQL 490 Query 493 AVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDR 552 AV + P ++ L+ W +P++PL+ R + ++ V R G GWNMDR Sbjct 491 AVVSSPTDQLPLIRVIENAAWTAVPSIPLFAAPRVQRWNDRVGNVVAGLARSGTGWNMDR 550 Query 553 WAL 555 W + Sbjct 551 WTV 553 >gi|254820458|ref|ZP_05225459.1| hypothetical protein MintA_11046 [Mycobacterium intracellulare ATCC 13950] Length=194 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 144/194 (75%), Positives = 162/194 (84%), Gaps = 0/194 (0%) Query 364 ALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGI 423 A+T ADGAAEA FG+ DP AAR+ALGG PL +RIGY PNARLA +G I +CA AGI Sbjct 1 AVTAADGAAEAGPFGKADPVAARNALGGAPLALRIGYQGPNARLAVNVGVITKSCAAAGI 60 Query 424 TVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANA 483 TV+ VT+D+ GP+ALRDGKID LLASTGGATGSGS+GS A+DAY LH+GNGNNLSGY+N Sbjct 61 TVTGVTLDSSGPRALRDGKIDALLASTGGATGSGSTGSSALDAYALHTGNGNNLSGYSNP 120 Query 484 QIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTR 543 Q+D I ALAVSAD AER RLLAE AP+LW +MPTLPLYRQQRTLLMS KMYAVS NPTR Sbjct 121 QVDSAIGALAVSADAAERVRLLAETAPILWGDMPTLPLYRQQRTLLMSKKMYAVSNNPTR 180 Query 544 WGAGWNMDRWALAR 557 WG GWNMDRWAL + Sbjct 181 WGVGWNMDRWALVQ 194 >gi|305681199|ref|ZP_07404006.1| bacterial extracellular solute-binding protein, family 5 [Corynebacterium matruchotii ATCC 14266] gi|305659404|gb|EFM48904.1| bacterial extracellular solute-binding protein, family 5 [Corynebacterium matruchotii ATCC 14266] Length=530 Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 166/556 (30%), Positives = 261/556 (47%), Gaps = 63/556 (11%) Query 22 LVAATTL--TACSGS------AAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGF 73 L+ AT L T CS S A YV+D L+ N T IG +S Q R G Sbjct 12 LIMATILLVTGCSNSKTEETKAEHSFGYVLDDYLINTNVTTGIGFSSNIHQLVGRIYPGA 71 Query 74 GYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF 133 +GP+GQ + + D + G+P+ ++YQI+D AVYSDG+PVTCD +LA A + R Sbjct 72 FVNGPEGQRIPNTDLVEARALPGAPMRVEYQITDKAVYSDGQPVTCDSFLLAQVAATSR- 130 Query 134 PGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI 193 P FD+ I I C G K A V F + LF+ +L+P+H IA + ++ Sbjct 131 PLFDSYNPL-MDQIDTINCQPGNKTATVVFKGNFGP-RWRYLFSGGTLLPAHAIAAKANM 188 Query 194 ---DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAV 250 D+ AL + ++ ++Q+A++WNS +DL +V SSGP+ ++SV DGAV Sbjct 189 SLADLNTALHNRDLPRLQQVAQVWNSGFDLGKFDPALQV-----SSGPFLVQSVAPDGAV 243 Query 251 VLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV----TPDSYQ 306 LV ND+++G A+ ++ V+P+G D+ + ++ + + + + + + + Y Sbjct 244 TLVRNDKYYGEPAVLDKLIVYPKGTDLHKLADAGNLHIAEADSKTDTNWIDRNDNKNPYI 303 Query 307 RTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIA----RDAGV---PIANSRLSP 359 P E LI A G LA R+A A CV + A+A +++GV P+A + P Sbjct 304 VKANPGVLAEHLILASAGVLADQADRQAFAACVDQAAVAQASSKESGVEVQPVALRTIRP 363 Query 360 ATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACA 419 D++ + G V+ A+ G T +RIGY P+ R A + I +C Sbjct 364 G--DSIATHLKEISDQHLG-VNIDQAKKLTGKT---IRIGYFAPDKRKMAMVAAIKASCE 417 Query 420 PAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSG 479 PAGIT+ DV+ +S S +Y G G Sbjct 418 PAGITILDVS-------------------------NEAASVSNLPFSYQDEDGVDQATDG 452 Query 480 YANAQIDGIISALAVS--ADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAV 537 A+A + + + A+PA + + WD T+PL Q R L+++ + + Sbjct 453 KADAVLQALDPQFSFPYVANPASDIEVARREENLSWDYTRTIPLAVQPRVLVLNKSVEGI 512 Query 538 SRNPTRWGAGWNMDRW 553 + N +G GWNMDRW Sbjct 513 AENTDLFGVGWNMDRW 528 >gi|225021307|ref|ZP_03710499.1| hypothetical protein CORMATOL_01326 [Corynebacterium matruchotii ATCC 33806] gi|224946040|gb|EEG27249.1| hypothetical protein CORMATOL_01326 [Corynebacterium matruchotii ATCC 33806] Length=530 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 165/556 (30%), Positives = 261/556 (47%), Gaps = 63/556 (11%) Query 22 LVAATTL--TACSGS------AAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGF 73 L+ AT L T CS + A YV+D L+ N T IG +S Q R G Sbjct 12 LIMATILLVTGCSNNKTEETKAEHSFGYVLDDYLINTNVTTGIGFSSNIHQLVGRIYPGA 71 Query 74 GYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRF 133 +GP+GQ + + D + G+P+ ++YQI+D AVYSDG+PVTCD +LA A + R Sbjct 72 FVNGPEGQRIPNTDLVEARALPGAPMRVEYQITDKAVYSDGQPVTCDSFLLAQVAATSR- 130 Query 134 PGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHI 193 P FD+ I I C G K A V F + LF+ +L+P+H IA + ++ Sbjct 131 PLFDSYNPL-MDQIDTINCQPGNKTATVVFKGNFGP-RWRYLFSGGTLLPAHAIAAKANM 188 Query 194 ---DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAV 250 D+ AL + ++ ++Q+A++WNS +DL +V SSGP+ ++SV DGAV Sbjct 189 SLADLNTALHNRDLPRLQQVAQVWNSGFDLGKFDPALQV-----SSGPFLVKSVAPDGAV 243 Query 251 VLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLV----TPDSYQ 306 LV ND+++G A+ ++ V+P+G D+ + ++ + + + + + + + Y Sbjct 244 TLVRNDKYYGEPAVLDKLIVYPKGTDLHKLADAGNLHIAEANSKTDTNWIDRNDNKNPYI 303 Query 307 RTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIA----RDAGV---PIANSRLSP 359 P E LI A G LA R+A A CV + A+A +++GV P+A + P Sbjct 304 VKANPGVLAEHLILASAGVLADQADRQAFAACVDQAAVAQASAKESGVEVQPVALRTIRP 363 Query 360 ATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACA 419 D++ + G V+ A+ G T +RIGY P+ R A + I +C Sbjct 364 G--DSIATHLKEISDQHLG-VNIDQAKKLTGKT---IRIGYFAPDKRKMAMVAAIKASCE 417 Query 420 PAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSG 479 PAGIT+ DV+ +S S +Y G G Sbjct 418 PAGITILDVS-------------------------NEAASVSNLPFSYQDEDGVDQATDG 452 Query 480 YANAQIDGIISALAVS--ADPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAV 537 A+A + + + A+PA + + WD T+PL Q R L+++ + + Sbjct 453 KADAVLQALDPQFSFPYVANPASDIEVARREENLSWDYTRTIPLAVQPRVLVLNKSVEGI 512 Query 538 SRNPTRWGAGWNMDRW 553 + N +G GWNMDRW Sbjct 513 AENTDLFGVGWNMDRW 528 >gi|271968440|ref|YP_003342636.1| dipeptide ABC transporter periplasmic component-like protein [Streptosporangium roseum DSM 43021] gi|270511615|gb|ACZ89893.1| ABC-type dipeptide transport system periplasmic component-like protein [Streptosporangium roseum DSM 43021] Length=581 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 156/537 (30%), Positives = 243/537 (46%), Gaps = 24/537 (4%) Query 39 IDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSP 98 I Y + +YN NT A+ R LTGF ++G G + D+DFGT P Sbjct 50 ITYAYEQEFHSYNGNTAAENATRNNGPLQRVLTGFWFYGDKGAITPDKDFGTYEKTSDDP 109 Query 99 LILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKK 158 L ++Y ISD AV+SDG P+ CDD +L WA +SG+ GF A+ G D ++C G KK Sbjct 110 LTVEYTISDKAVWSDGTPIDCDDALLWWAYKSGKIKGFSASGTDGVQDTKVLDCDKGGKK 169 Query 159 ARVSFIPDRSVVDH-SQLFTATSLMPSHVIADQLHI---DVTAALLSNNVSAVEQIARLW 214 + + D+ D + A +MP+HV+ Q + + AA+ + + +E+ + + Sbjct 170 --FTLVYDKPFADWVANGPGAAEIMPAHVVEKQGGLSEDEFIAAVKATDAKKLEKAIKFF 227 Query 215 NSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITKRITVWPQG 274 N W + G P+SGPYK+ + ++ VAND+WWGT A T I Sbjct 228 NDGW-ISEGTL--PAADLIPASGPYKLSKMDAGQSLTFVANDKWWGTPAATPTIVERFIA 284 Query 275 ADIQDR-VNNRSVDVVDVAAGSS--GSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRT 331 D Q + + NR V +V+ G L + Q + E L F S + + Sbjct 285 LDEQAQALQNREVQIVEPQPGPDVLNQLKALEGVQVNLGDAYTYEHLDFNFDSSPFKDKA 344 Query 332 -RRALALCVPRDAIARDAGVPIANS-------RLSPATDDALTDADGAAEARQFGRVDPA 383 R A A CVPR I + P+A ++P +++ + A + + D Sbjct 345 LREAFAKCVPRQLIVDNLIKPVAPESKPLEVRNVAPFQNNSAAVVAASGGAGVYAQQDIE 404 Query 384 AAR---DALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRD 440 A+ + G T L V+IGY PN R A + I D+C AG V D + + Sbjct 405 GAKALVEKAGKTGLEVKIGYQTPNPRRTAAVQLIIDSCNKAGFKVVDKGSEDFFGTVMPA 464 Query 441 GKIDV-LLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPA 499 DV L A G + SG + + GNN Y++ ++D +I L + D A Sbjct 465 NNYDVALYAWAGSSLVSGWASTFTTPKKCDGENKGNNNGCYSSKKVDELIKKLNSTVDLA 524 Query 500 ERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWALA 556 + ++AE LW ++ T+PL++ + V NP + WNMD+W+L+ Sbjct 525 AQDPIIAEIEKNLWADLATIPLFQHPGLSAWDETVKNVVPNPAQSTITWNMDKWSLS 581 >gi|300858589|ref|YP_003783572.1| hypothetical protein cpfrc_01172 [Corynebacterium pseudotuberculosis FRC41] gi|300686043|gb|ADK28965.1| putative secreted protein [Corynebacterium pseudotuberculosis FRC41] gi|302206301|gb|ADL10643.1| Oligopeptide-binding protein oppA [Corynebacterium pseudotuberculosis C231] gi|302330858|gb|ADL21052.1| Oligopeptide-binding protein oppA [Corynebacterium pseudotuberculosis 1002] gi|308276543|gb|ADO26442.1| dipeptide-binding protein DciAE [Corynebacterium pseudotuberculosis I19] gi|341824985|gb|AEK92506.1| Oligopeptide-binding protein oppA [Corynebacterium pseudotuberculosis PAT10] Length=546 Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 182/569 (32%), Positives = 260/569 (46%), Gaps = 85/569 (14%) Query 20 ATLVAATTLTACSGSAA--------AQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLT 71 A + ++ LTAC A Y VD LVT N T +G S AQ A L Sbjct 22 AVIASSVLLTACGSDGARNGAAGNSKHFGYAVDDYLVTTNAGTNLGI-STNAQLMAGRLY 80 Query 72 GFGY-HGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQS 130 Y GP GQ++ +R V+ G + Y+I+D AVYSDG+PVTCD +LA+ A S Sbjct 81 PSAYVSGPKGQLIPNRTLVETQVLPGPNQRVIYKIADSAVYSDGKPVTCDAFLLAFTAGS 140 Query 131 GRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQ 190 A VD +++CTAG K+A V + + QLF A LMP+H +A + Sbjct 141 MNSLFESHMPLAQQVD--HVDCTAGSKQATVVYKENFG-ARWRQLFGAGVLMPAHAVAAK 197 Query 191 LHIDVTA---ALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDD 247 ID+ L S + +A+ ++A +WN+ ++L SH + + +SGP+KIESV D Sbjct 198 AGIDLEELNRLLKSRDYTALSRVADIWNNGFNL----SHFDPELQV-ASGPFKIESVGDK 252 Query 248 GAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGS-LVTPDSYQ 306 G VV V ND + G KA R+ VWP+G D+ + NN S+ + DV S L DS+ Sbjct 253 GEVVFVRNDLYNGEKAALDRLVVWPRGIDLNELRNNGSLQIADVTNTDLISWLDRNDSHN 312 Query 307 -RTDYPSAGI--EQLIFAPQGSLAQSRTRRALALCVPRDAIAR----DAGVPI--ANSRL 357 T G+ + LI G + RRALA CV + ++A+ +GV + ++R Sbjct 313 PYTVAAETGLLTDSLILGNAGIFSDVEARRALAACVDQASVAKASSTASGVDVQPVHART 372 Query 358 SPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADA 417 ATD E +D AA R L G T+++GY P+ R A + I+ + Sbjct 373 VRATDAVNAQLKDIIEPHTHVNID-AAKR--LEGK--TIKVGYDGPDPRKKAMVEEISKS 427 Query 418 CAPAGITVSDVT-------------VDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAM 464 CAPAGIT+ D V G + +G ID +L + A+ Sbjct 428 CAPAGITIEDAAKEAASLADLSHTHVTDSGVGLIEEGTIDAILMAIDPAS---------- 477 Query 465 DAYDLHSGNGNNLSGYANAQIDGIISALAVSADPAERARLLAEAAPVLWDEMPTLPLYRQ 524 + +NLS A AER W+E+PT+PL Q Sbjct 478 -----EYADVSNLSNNVQA------------TRAAERRS---------WEEVPTIPLASQ 511 Query 525 QRTLLMSTKMYAVSRNPTRWGAGWNMDRW 553 R ++ + V N G GWNMDRW Sbjct 512 PRVFVVDKAVGNVVTNTDLSGIGWNMDRW 540 >gi|227542212|ref|ZP_03972261.1| dipeptide-binding protein DciAE [Corynebacterium glucuronolyticum ATCC 51866] gi|227182041|gb|EEI63013.1| dipeptide-binding protein DciAE [Corynebacterium glucuronolyticum ATCC 51866] Length=560 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 180/582 (31%), Positives = 267/582 (46%), Gaps = 59/582 (10%) Query 4 RRRRHTRIAGLRVVGTATLVAATTLTACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGA 63 RR +A + VG L+A+ + G+ Y V G +VT N+ + IG + A Sbjct 4 RRAIRALVAAVCSVG---LLASCSSGGKDGNDEKIFSYFVPGDVVTTNSASYIGFLTDSA 60 Query 64 QAFARTLTGFGYHGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLV 123 R G HGP GQ++ +RD T ++ G+ + Y ISD A +SDG P+TCDD Sbjct 61 LVSPRLFPGVFVHGPAGQMIPNRDVATAQLLPGAKRQVVYTISDTATFSDGVPLTCDDFA 120 Query 124 LAWAAQSGRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMP 183 L A Q+G+FP + I ++C G K+ V F + LF + ++MP Sbjct 121 L--AVQAGKFPEVFDSHLPLMEQIEGVKCQPGAKEFTVVFHEGQG-QRWRNLFRSGTVMP 177 Query 184 SHVIADQLHI---DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYK 240 +HV+A + + D A + S +V+ +++I W D + V+ F GPY+ Sbjct 178 AHVLATKFGLTEADFLARVQSGDVAQMQEIGDAWAQ--DFRVDNFDPAVQVSF---GPYR 232 Query 241 IESVLDDGAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSV----DVVDVAAGS- 295 IE V + G +VLVAN+ + G + + P G + + V DV VA S Sbjct 233 IERVTEGGGLVLVANEHYNGDAPAISPLVIRPHGGSTGEFHESGGVIGIADVPRVADASW 292 Query 296 ----SGSLVTPDSYQRTDYPSAGIEQLIFAPQGSLAQSRTRRALALCVPRDAIARD---- 347 SG V P S + I+QL+ + G R+A A C+ ++A+A+ Sbjct 293 TDKKSGYAVEPTSGKL-------IDQLVLSKTGIFTAPEDRQAFAACINQEAVAQQSTSV 345 Query 348 AGVPIA--NSRLSPA---TDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGR 402 +GVP+ +RLS A T A D A A P A R L G T+R+ Y Sbjct 346 SGVPVTPLGTRLSSAETPTTIATQDIGAAHMAVDL----PLAER--LRGK--TIRVAYVG 397 Query 403 PNARLAATIGTIADACAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSC 462 PN R AA + I +C PAGITV DV+ D PQA V A+ T +G Sbjct 398 PNERYAAMVEAIRQSCEPAGITVVDVSADF-DPQAATIEPPTVGDAAAAYPTDAGIVPEQ 456 Query 463 AMDAYDLHSGNGNNLSGYANAQIDGIISALAVSADPA----------ERARLLAEAAPVL 512 ++ L + N + + A + + AL ++ +PA E + +A +L Sbjct 457 PVEP-PLTTYAAGNYATASGAVVPPMADALLIAVEPAFEYGHVAASTEDQEEVRKAEEML 515 Query 513 WDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWA 554 W E+PT+PL Q R +M T + V TR G GWNMDRWA Sbjct 516 WQEVPTIPLSSQPRVFIMDTTVDNVVIGTTRSGIGWNMDRWA 557 >gi|337290889|ref|YP_004629910.1| hypothetical protein CULC22_01281 [Corynebacterium ulcerans BR-AD22] gi|334697002|gb|AEG81799.1| putative secreted protein [Corynebacterium ulcerans 809] gi|334699195|gb|AEG83991.1| putative secreted protein [Corynebacterium ulcerans BR-AD22] Length=557 Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 177/562 (32%), Positives = 253/562 (46%), Gaps = 71/562 (12%) Query 20 ATLVAATTLTACSGSA--------AAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLT 71 A LV++ LTAC + Y VD LVT N T +G S AQ A L Sbjct 33 AVLVSSVLLTACGSDSTRDGTAGNGKHFGYAVDDYLVTTNAGTNVGV-STNAQLMAGRLY 91 Query 72 GFGY-HGPDGQVVADRDFGTVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQS 130 Y GP GQ++ +R V+ G + Y+I+D AVYSDG+PVTCD +LA+ A S Sbjct 92 PSAYVSGPKGQLIPNRTLVETQVLPGPNQQVIYKIADSAVYSDGKPVTCDAFLLAFTAGS 151 Query 131 GRFPGFDAATQAGYVDIANIECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQ 190 A VD ++ECTAG K+A V + + QLF A LMP+H +A + Sbjct 152 MNSLFESHMPLAQQVD--HVECTAGSKQATVVYKENFG-ARWRQLFGAGVLMPAHAVAAK 208 Query 191 LHI---DVTAALLSNNVSAVEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDD 247 I ++ L S + +A+ +IA +WN+ ++LK +V +SGP+KIESV D Sbjct 209 AGISLEELNRLLKSRDYAALSRIAEIWNNGFNLKHFDPELQV-----ASGPFKIESVGDK 263 Query 248 GAVVLVANDRWWGTKAITKRITVWPQGADIQDRVNNRSVDVVDVAAGSSGS-LVTPDSYQ 306 G VV V ND + G KA R+ VWP+G D+ + N S+ + DV S L DS+ Sbjct 264 GEVVFVRNDLYNGEKAALDRLVVWPRGIDLNELRNKGSLQIADVTNTDLISWLDRNDSHN 323 Query 307 -RTDYPSAGI--EQLIFAPQGSLAQSRTRRALALCVPRDAIAR----DAGVPI--ANSRL 357 T G+ + LI G + RRALA CV + ++A+ +GV + +R Sbjct 324 PYTVAAETGLLTDSLILGDAGIFSDVEARRALAACVDQASVAKASSTASGVDVQPVYART 383 Query 358 SPATDDALTDADGAAEARQFGRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADA 417 ATD E +D A + T+++GY P+ R A + I + Sbjct 384 VRATDAVNAQLRDIIEPHVHVNIDVAKRLEG-----KTIKVGYDGPDPRKKAMVEEIRKS 438 Query 418 CAPAGITVSDVTVDTPGPQALRDGKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNL 477 CA AGIT+ D + L + T G G+ Sbjct 439 CAAAGITIEDAAKEAASLADLSHTHV------TDSGVGLVEEGT---------------- 476 Query 478 SGYANAQIDGIISALAVSADPAERARLLAE------AAPVLWDEMPTLPLYRQQRTLLMS 531 ID I+ A+ S++ A+ A L A W+E+PT+PL Q R ++ Sbjct 477 -------IDAILMAVDPSSEYADVASLSNNVQATRAAERRSWEEVPTIPLASQPRVFVVD 529 Query 532 TKMYAVSRNPTRWGAGWNMDRW 553 + V N G GWNMDRW Sbjct 530 KAVGNVVTNTDLSGIGWNMDRW 551 >gi|227549161|ref|ZP_03979210.1| dipeptide-binding protein DciAE [Corynebacterium lipophiloflavum DSM 44291] gi|227078721|gb|EEI16684.1| dipeptide-binding protein DciAE [Corynebacterium lipophiloflavum DSM 44291] Length=534 Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 164/539 (31%), Positives = 240/539 (45%), Gaps = 47/539 (8%) Query 30 ACSGSAAAQIDYVVDGALVTYNTNTVIGAASAGAQAFARTLTGFGYHGPDGQVVADRDFG 89 A S ++ Y V L T N T +GA+ AR G GP GQ++ + D Sbjct 17 ASDESTTSEFSYQVPVNLSTTNAGTDVGASEFAQMLSARLYPGVFVVGPSGQMIPNTDLV 76 Query 90 TVSVVEGSPLILDYQISDDAVYSDGRPVTCDDLVLAWAAQSGRFPGFDAATQAGYVDIAN 149 + G+ I++Y +SD+AV+SDG PVTC D +LA+ A G+ P + + ++ Sbjct 77 RTQALPGAQRIVEYTLSDEAVFSDGEPVTCTDYLLAFTA--GKNPALFGSHMPLFEEVER 134 Query 150 IECTAGQKKARVSFIPDRSVVDHSQLFTATSLMPSHVIADQLHIDV---TAALLSNNVSA 206 ++C G K V F P +LF +++P+H +A +L DV +A L + + Sbjct 135 LDCEPGAKTFDVVFAPGHGA-QWRELFGPGTVVPAHAVAAKLGTDVAGLSAQLDEGDAAT 193 Query 207 VEQIARLWNSTWDLKPGRSHDEVRSRFPSSGPYKIESVLDDGAVVLVANDRWWGTKAITK 266 + +A +W S +DL V S GPY ++SV + G V LVAN+R++G +T Sbjct 194 LRPVAEVWRSGFDLANFDPAMHV-----SFGPYTVDSVGEAGQVSLVANERYYGDAPLTD 248 Query 267 RITVWPQGADIQDRVNNRSVDVVDVAAGSSGSLVTPDSYQRTDYPS---AGIEQLIFAPQ 323 I VWP A ++ V D+A + L D S E L F Sbjct 249 EIVVWPGTAASAQLNGTGNLRVADLAEPNPEWLDINAEGNELDVTSLVGTLTESLTFETA 308 Query 324 GSLAQSRTRRALALCVPRDAIARDAG------VPIANSRLSPATDDALTDADGAAEARQF 377 G + R+ALA C +A+A + VP + + P D D R Sbjct 309 GPWSFPANRQALARCADPNAVAAASSGAAGVEVPSVLTHVVPNNDPLAPRFDDIVAPR-- 366 Query 378 GRVDPAAARDALGGTPLTVRIGYGRPNARLAATIGTIADACAPAGITVSDVTVDTPGPQA 437 G VD AAA A G L +R+GY + R+A+ + +I C PAGI+V DVT T Sbjct 367 GGVDIAAASAAGG---LELRVGYAHVSPRMASMVDSIRATCEPAGISVIDVTAATGAGAT 423 Query 438 LRD-GKIDVLLASTGGATGSGSSGSCAMDAYDLHSGNGNNLSGYANAQIDGIISALAVSA 496 LRD G++DV G D + G + + N Q + I + + Sbjct 424 LRDLGRVDV--------------GEWGEDV--VVEGTIDAMLRPVNPQTEYTIPSTRAAD 467 Query 497 DPAERARLLAEAAPVLWDEMPTLPLYRQQRTLLMSTKMYAVSRNPTRWGAGWNMDRWAL 555 A R R LWDE+P+LPL Q R+ + K+ V G GWNMDRW L Sbjct 468 LDAMRKRETE-----LWDELPSLPLAAQPRSFAVDRKLSNVIVYTGPTGIGWNMDRWQL 521 Lambda K H 0.317 0.131 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1240770250536 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40