BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2586c Length=442 Score E Sequences producing significant alignments: (Bits) Value gi|15609723|ref|NP_217102.1| preprotein translocase subunit SecF... 883 0.0 gi|15842125|ref|NP_337162.1| preprotein translocase subunit SecF... 881 0.0 gi|289448235|ref|ZP_06437979.1| preprotein translocase subunit s... 880 0.0 gi|289754704|ref|ZP_06514082.1| preprotein translocase subunit S... 880 0.0 gi|340627603|ref|YP_004746055.1| putative protein-export membran... 880 0.0 gi|31793770|ref|NP_856263.1| preprotein translocase subunit SecF... 878 0.0 gi|294994304|ref|ZP_06799995.1| preprotein translocase subunit S... 852 0.0 gi|289751210|ref|ZP_06510588.1| LOW QUALITY PROTEIN: preprotein ... 821 0.0 gi|118617350|ref|YP_905682.1| preprotein translocase subunit Sec... 661 0.0 gi|118462611|ref|YP_882649.1| preprotein translocase subunit Sec... 642 0.0 gi|41407142|ref|NP_959978.1| preprotein translocase subunit SecF... 638 0.0 gi|240171978|ref|ZP_04750637.1| preprotein translocase subunit S... 635 6e-180 gi|296170831|ref|ZP_06852396.1| protein-export membrane protein ... 630 2e-178 gi|254821449|ref|ZP_05226450.1| preprotein translocase subunit S... 605 4e-171 gi|342858589|ref|ZP_08715244.1| preprotein translocase subunit S... 603 2e-170 gi|15827165|ref|NP_301428.1| preprotein translocase subunit SecF... 584 8e-165 gi|254775914|ref|ZP_05217430.1| preprotein translocase subunit S... 583 2e-164 gi|108799244|ref|YP_639441.1| preprotein translocase subunit Sec... 553 1e-155 gi|120403569|ref|YP_953398.1| preprotein translocase subunit Sec... 546 3e-153 gi|466825|gb|AAA17100.1| secD [Mycobacterium leprae] 540 1e-151 gi|333991013|ref|YP_004523627.1| protein-export membrane protein... 530 1e-148 gi|145224397|ref|YP_001135075.1| preprotein translocase subunit ... 530 1e-148 gi|118470626|ref|YP_887281.1| preprotein translocase subunit Sec... 528 9e-148 gi|169629963|ref|YP_001703612.1| preprotein translocase subunit ... 509 4e-142 gi|111023849|ref|YP_706821.1| preprotein translocase subunit Sec... 485 6e-135 gi|226306415|ref|YP_002766375.1| protein-export membrane protein... 479 4e-133 gi|229491971|ref|ZP_04385788.1| preprotein translocase subunit S... 478 9e-133 gi|226366285|ref|YP_002784068.1| preprotein translocase subunit ... 472 5e-131 gi|54025660|ref|YP_119902.1| preprotein translocase subunit SecF... 449 4e-124 gi|325672612|ref|ZP_08152308.1| protein-export membrane protein ... 440 3e-121 gi|312139498|ref|YP_004006834.1| preprotein translocase subunit ... 439 6e-121 gi|333919487|ref|YP_004493068.1| protein-export membrane protein... 431 1e-118 gi|296393864|ref|YP_003658748.1| protein-export membrane protein... 415 7e-114 gi|326382131|ref|ZP_08203823.1| preprotein translocase subunit S... 409 5e-112 gi|343924323|ref|ZP_08763874.1| protein-export membrane protein ... 408 9e-112 gi|319947805|ref|ZP_08021999.1| preprotein translocase subunit S... 392 8e-107 gi|262202235|ref|YP_003273443.1| protein-export membrane protein... 382 7e-104 gi|237785617|ref|YP_002906322.1| protein-export membrane protein... 379 6e-103 gi|145295777|ref|YP_001138598.1| preprotein translocase subunit ... 375 1e-101 gi|38233956|ref|NP_939723.1| preprotein translocase subunit SecF... 374 2e-101 gi|227542213|ref|ZP_03972262.1| preprotein translocase subunit S... 372 7e-101 gi|227488790|ref|ZP_03919106.1| preprotein translocase subunit S... 371 1e-100 gi|336325686|ref|YP_004605652.1| preprotein translocase subunit ... 371 1e-100 gi|300858590|ref|YP_003783573.1| protein-export membrane protein... 371 1e-100 gi|302206302|gb|ADL10644.1| Protein-export membrane protein secF... 370 3e-100 gi|19552867|ref|NP_600869.1| preprotein translocase subunit SecF... 370 4e-100 gi|334563775|ref|ZP_08516766.1| preprotein translocase subunit S... 367 2e-99 gi|300787169|ref|YP_003767460.1| preprotein translocase SecF sub... 366 4e-99 gi|296139652|ref|YP_003646895.1| protein-export membrane protein... 365 1e-98 gi|257055541|ref|YP_003133373.1| protein translocase subunit sec... 363 2e-98 >gi|15609723|ref|NP_217102.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis H37Rv] gi|148662425|ref|YP_001283948.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis H37Ra] gi|148823781|ref|YP_001288535.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis F11] 57 more sequence titles Length=442 Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/442 (100%), Positives = 442/442 (100%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 421 GARPVRPVGTRRPTGKRNAGRR 442 >gi|15842125|ref|NP_337162.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis CDC1551] gi|13882409|gb|AAK46976.1| protein-export membrane protein SecF [Mycobacterium tuberculosis CDC1551] gi|323718859|gb|EGB28015.1| protein-export membrane protein secF [Mycobacterium tuberculosis CDC1551A] Length=442 Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/442 (99%), Positives = 442/442 (100%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALM+VAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLALMLVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 421 GARPVRPVGTRRPTGKRNAGRR 442 >gi|289448235|ref|ZP_06437979.1| preprotein translocase subunit secF [Mycobacterium tuberculosis CPHL_A] gi|289575294|ref|ZP_06455521.1| preprotein translocase subunit secF [Mycobacterium tuberculosis K85] gi|339632614|ref|YP_004724256.1| protein-export membrane protein SECF [Mycobacterium africanum GM041182] gi|289421193|gb|EFD18394.1| preprotein translocase subunit secF [Mycobacterium tuberculosis CPHL_A] gi|289539725|gb|EFD44303.1| preprotein translocase subunit secF [Mycobacterium tuberculosis K85] gi|339331970|emb|CCC27673.1| putative protein-export membrane protein SECF [Mycobacterium africanum GM041182] Length=442 Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/442 (99%), Positives = 441/442 (99%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVL LMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLTLMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 421 GARPVRPVGTRRPTGKRNAGRR 442 >gi|289754704|ref|ZP_06514082.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis EAS054] gi|289695291|gb|EFD62720.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis EAS054] Length=442 Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/442 (99%), Positives = 441/442 (99%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGT VSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTMVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 421 GARPVRPVGTRRPTGKRNAGRR 442 >gi|340627603|ref|YP_004746055.1| putative protein-export membrane protein SECF [Mycobacterium canettii CIPT 140010059] gi|340005793|emb|CCC44959.1| putative protein-export membrane protein SECF [Mycobacterium canettii CIPT 140010059] Length=442 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/442 (99%), Positives = 441/442 (99%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTL ERTELVR Sbjct 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLCERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 421 GARPVRPVGTRRPTGKRNAGRR 442 >gi|31793770|ref|NP_856263.1| preprotein translocase subunit SecF [Mycobacterium bovis AF2122/97] gi|121638471|ref|YP_978695.1| preprotein translocase subunit SecF [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990965|ref|YP_002645652.1| preprotein translocase subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|31619364|emb|CAD94802.1| PROBABLE PROTEIN-EXPORT MEMBRANE PROTEIN SECF [Mycobacterium bovis AF2122/97] gi|121494119|emb|CAL72597.1| Probable protein-export membrane protein secF [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774078|dbj|BAH26884.1| preprotein translocase subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|341602509|emb|CCC65185.1| probable protein-export membrane protein secF [Mycobacterium bovis BCG str. Moreau RDJ] Length=442 Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/442 (99%), Positives = 440/442 (99%), Gaps = 0/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVL LMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLTLMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRP GKRNAGRR Sbjct 421 GARPVRPVGTRRPPGKRNAGRR 442 >gi|294994304|ref|ZP_06799995.1| preprotein translocase subunit SecF [Mycobacterium tuberculosis 210] Length=441 Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/442 (99%), Positives = 441/442 (99%), Gaps = 1/442 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEA GPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEA-GPKGTDGQPSKQAISDSAVS 179 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 180 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 239 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 240 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 299 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 300 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 359 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 360 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 419 Query 421 GARPVRPVGTRRPTGKRNAGRR 442 GARPVRPVGTRRPTGKRNAGRR Sbjct 420 GARPVRPVGTRRPTGKRNAGRR 441 >gi|289751210|ref|ZP_06510588.1| LOW QUALITY PROTEIN: preprotein translocation complex subunit secF [Mycobacterium tuberculosis T92] gi|289691797|gb|EFD59226.1| LOW QUALITY PROTEIN: preprotein translocation complex subunit secF [Mycobacterium tuberculosis T92] Length=443 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/439 (98%), Positives = 429/439 (98%), Gaps = 3/439 (0%) Query 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV Sbjct 1 MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV 60 Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG Sbjct 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG 120 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS Sbjct 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV Sbjct 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS Sbjct 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR Sbjct 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP Sbjct 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 Query 421 GARPVRPVGTRRPTGKRNA 439 GA RP RR G R A Sbjct 421 GA---RPSAVRRYPGVRPA 436 >gi|118617350|ref|YP_905682.1| preprotein translocase subunit SecF [Mycobacterium ulcerans Agy99] gi|183982135|ref|YP_001850426.1| protein-export membrane protein SecF [Mycobacterium marinum M] gi|118569460|gb|ABL04211.1| protein-export membrane protein SecF [Mycobacterium ulcerans Agy99] gi|183175461|gb|ACC40571.1| protein-export membrane protein SecF [Mycobacterium marinum M] Length=446 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/448 (75%), Positives = 381/448 (86%), Gaps = 8/448 (1%) Query 1 MASKAK---TGRDDE-ATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTG 56 MAS+ K T ++D+ SAVELTEA+E + A G S ++ A+ L HH+ LSRLYTGTG Sbjct 1 MASETKAETTAKNDKKGASAVELTEASEGS-AELSG-SGSEKATGLPHHNLLSRLYTGTG 58 Query 57 AFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYY 116 AFEVVGRR+LW+G+SGAI+A+AI SI+ RGFTFGIDFKGGTTVSFPRG +QV QVE+V++ Sbjct 59 AFEVVGRRKLWYGISGAIMAIAILSIIVRGFTFGIDFKGGTTVSFPRGDSQVTQVEEVFH 118 Query 117 RALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISD 176 +GS+P+SVV VG+GASATVQIRSETL+++QT KLRDALF+AF PKG DG+PSK+AISD Sbjct 119 NVVGSDPESVVTVGSGASATVQIRSETLSNEQTEKLRDALFDAFHPKGADGKPSKKAISD 178 Query 177 SAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLV 236 +AVSETWGGQITKKAVIALVVFLVLVA+YITVRYERYMTISAI AM+FDLTVTAGVYSLV Sbjct 179 AAVSETWGGQITKKAVIALVVFLVLVAIYITVRYERYMTISAIAAMIFDLTVTAGVYSLV 238 Query 237 GFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRS 296 GFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLA+NQTFMRS Sbjct 239 GFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAVNQTFMRS 298 Query 297 INTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERT 356 INTSLI VLPVL+LMVVAVWLLGVGTLKDLALVQLIGII+GTYSSIFFATPLLVTLRERT Sbjct 299 INTSLISVLPVLSLMVVAVWLLGVGTLKDLALVQLIGIIVGTYSSIFFATPLLVTLRERT 358 Query 357 ELVRNHTRRVLKRRNSGSPAGSEDASTDG--GEQPAAADEQSLVGITQASSQSAPRAAQG 414 ELVR+HTR+V+KRR S A E A D G++ T ++ A Sbjct 359 ELVRSHTRKVIKRRTPASRAAGERAEADAESGQELTETTAAETSTETARPNEKADAKPAA 418 Query 415 SSKPAPGARPVRPVGTRRPTGKRNAGRR 442 S+KPAPGARPVRP T+RPTGKRNAGRR Sbjct 419 SNKPAPGARPVRPTATKRPTGKRNAGRR 446 >gi|118462611|ref|YP_882649.1| preprotein translocase subunit SecF [Mycobacterium avium 104] gi|118163898|gb|ABK64795.1| protein export protein SecF [Mycobacterium avium 104] Length=435 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/445 (75%), Positives = 365/445 (83%), Gaps = 19/445 (4%) Query 2 ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVV 61 ASKA G A E+TE + A TD D+ A+ L HSFLSRLYTGTGAFEVV Sbjct 6 ASKAAKG-------ATEITETSSGASELTDSDAA---AAGLPRHSFLSRLYTGTGAFEVV 55 Query 62 GRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYR 117 GRRRLWFG+SGAIVAVAI SI RGFTFGIDF GGTTVS P G+ AQV++V+ + Sbjct 56 GRRRLWFGISGAIVAVAILSIALRGFTFGIDFNGGTTVSMPAAGTHGTVHTAQVQEVFRK 115 Query 118 ALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDS 177 LG++P+SVV+VG GA+ATVQIRSETLT+DQT KLR+ALF+AFGPKG DG+PSKQAISDS Sbjct 116 TLGTDPESVVVVGNGAAATVQIRSETLTNDQTTKLRNALFDAFGPKGADGKPSKQAISDS 175 Query 178 AVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVG 237 AVSETWG QIT KA+IALVVFL LV LYITVRYERYMT++AI AM FDLTVTAGVYSLVG Sbjct 176 AVSETWGDQITDKALIALVVFLALVGLYITVRYERYMTLAAIAAMFFDLTVTAGVYSLVG 235 Query 238 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSI 297 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENT FQHT RRTFAEQANLAINQTFMRSI Sbjct 236 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTRDFQHTNRRTFAEQANLAINQTFMRSI 295 Query 298 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTE 357 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQL+GI++GTYSSIF ATPLLVTLRERTE Sbjct 296 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLVGILVGTYSSIFVATPLLVTLRERTE 355 Query 358 LVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSK 417 LVR HTRRVLKRR G+ A +E + D E PA + +++ T+A +S P + SK Sbjct 356 LVRTHTRRVLKRRAGGARASAESTADDAAETPAGSGDEA----TEAERES-PSSRAAPSK 410 Query 418 PAPGARPVRPVGTRRPTGKRNAGRR 442 PAPGARPVRP G RRPTGKRN GRR Sbjct 411 PAPGARPVRPTGARRPTGKRNVGRR 435 >gi|41407142|ref|NP_959978.1| preprotein translocase subunit SecF [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395493|gb|AAS03361.1| SecF [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461527|gb|EGO40395.1| protein-export membrane protein, SecD/SecF family/protein-export membrane protein SecF [Mycobacterium avium subsp. paratuberculosis S397] Length=435 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/446 (75%), Positives = 362/446 (82%), Gaps = 21/446 (4%) Query 2 ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVV 61 ASKA G A E+TE + A TD D+ A+ L HSFLSRLYTGTGAFEVV Sbjct 6 ASKAAKG-------ATEITETSSGASELTDSDAA---AAGLPRHSFLSRLYTGTGAFEVV 55 Query 62 GRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYR 117 GRRRLWFG+SGAIVAVAI SI RGFTFGIDF GGTTVS P G+ AQV++V+ + Sbjct 56 GRRRLWFGISGAIVAVAILSIALRGFTFGIDFNGGTTVSMPAAGTHGTVHTAQVQEVFRK 115 Query 118 ALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDS 177 LG++P+SVV+VG GA+ATVQIRSETLT+DQT KLR+ALF+AFGPKG DG+PSKQAISDS Sbjct 116 TLGTDPESVVVVGNGAAATVQIRSETLTNDQTTKLRNALFDAFGPKGADGKPSKQAISDS 175 Query 178 AVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVG 237 VSETWG QIT KA+IALVVFL LV LYITVRYERYMT++AI AM FDLTVTAGVYSLVG Sbjct 176 QVSETWGDQITDKALIALVVFLALVGLYITVRYERYMTLAAIAAMFFDLTVTAGVYSLVG 235 Query 238 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSI 297 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENT FQHT RRTFAEQANLAINQTFMRSI Sbjct 236 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTRDFQHTNRRTFAEQANLAINQTFMRSI 295 Query 298 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTE 357 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQL+GI++GTYSSIF ATPLLVTLRERTE Sbjct 296 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLVGILVGTYSSIFVATPLLVTLRERTE 355 Query 358 LVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPA-AADEQSLVGITQASSQSAPRAAQGSS 416 LVR HTRRVLKRR G+ A +E + D E PA + DE + SS+ AP S Sbjct 356 LVRTHTRRVLKRRAGGARASAESTADDAAEPPAGSGDEATEAERESRSSRPAP------S 409 Query 417 KPAPGARPVRPVGTRRPTGKRNAGRR 442 KPAPGARPVRP G RRPTGKRN GRR Sbjct 410 KPAPGARPVRPTGARRPTGKRNVGRR 435 >gi|240171978|ref|ZP_04750637.1| preprotein translocase subunit SecF [Mycobacterium kansasii ATCC 12478] Length=436 Score = 635 bits (1637), Expect = 6e-180, Method: Compositional matrix adjust. Identities = 329/439 (75%), Positives = 368/439 (84%), Gaps = 26/439 (5%) Query 11 DEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGV 70 D A AVEL+ S D A+ HSFLSRLYTGTGAFEVVGRR+LW+G+ Sbjct 17 DAAQGAVELS------------GSDPDRATGGVQHSFLSRLYTGTGAFEVVGRRKLWYGI 64 Query 71 SGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVG 130 SG IV +AI SI+ RGFTFGIDFKGGTTVSFPRG +V +VE+V+++ LGS+P+SVV VG Sbjct 65 SGGIVTIAILSIIVRGFTFGIDFKGGTTVSFPRGDVKVTEVEEVFHKTLGSDPESVVTVG 124 Query 131 AGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKK 190 GASATVQIRS+TL++ QT KLRDALF+AF PKG DG+PSK+AISD+AVSETWGGQITKK Sbjct 125 NGASATVQIRSKTLSNAQTEKLRDALFDAFHPKGADGKPSKKAISDAAVSETWGGQITKK 184 Query 191 AVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLT 250 AVIALVVFLVLVA+YITVRYERYMTISAI AM+FDLTVTAGVY+LVGFEVTPATVIGLLT Sbjct 185 AVIALVVFLVLVAIYITVRYERYMTISAIAAMVFDLTVTAGVYALVGFEVTPATVIGLLT 244 Query 251 ILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLAL 310 ILGFS+YDTVIVFDKVEENT+GFQHTTRRTFAEQANLA+NQTFMRSINTSLI VLPV+AL Sbjct 245 ILGFSIYDTVIVFDKVEENTNGFQHTTRRTFAEQANLAVNQTFMRSINTSLISVLPVVAL 304 Query 311 MVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRR 370 MVVAVWLLGVGTLKDLALVQLIGII+GTYSSIFFATPLLVTLRERT+LVR HTRRVLKRR Sbjct 305 MVVAVWLLGVGTLKDLALVQLIGIIVGTYSSIFFATPLLVTLRERTDLVRTHTRRVLKRR 364 Query 371 NSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSA--PRAAQ----GSSKPAPGARP 424 + SP +E GE AA +S + +AS QSA P+ A S+KPAPGARP Sbjct 365 GAASPVAAEQ-----GEDTAAELTES--AVVEASPQSADHPQKADSKPAASTKPAPGARP 417 Query 425 VRPVGTR-RPTGKRNAGRR 442 VRP GT+ RPTGKRNAGRR Sbjct 418 VRPTGTKQRPTGKRNAGRR 436 >gi|296170831|ref|ZP_06852396.1| protein-export membrane protein SecF [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894520|gb|EFG74260.1| protein-export membrane protein SecF [Mycobacterium parascrofulaceum ATCC BAA-614] Length=421 Score = 630 bits (1624), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 326/444 (74%), Positives = 361/444 (82%), Gaps = 28/444 (6%) Query 3 SKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVG 62 S +K +D A ELT A+E V TDG + HSFLSRLYTGTGAFEVVG Sbjct 2 SASKASKD-----ATELTAASEGTVQLTDGGAGQP------RHSFLSRLYTGTGAFEVVG 50 Query 63 RRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYRA 118 RRRLWFG+SG IVAVA+ASI+ RGFTFGIDF GGTTVS P G Q +QV DV+ +A Sbjct 51 RRRLWFGISGGIVAVALASIILRGFTFGIDFNGGTTVSMPAAGATGQVQTSQVSDVFRKA 110 Query 119 LGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSA 178 +G +P+SVVIVG GASATVQIRSETL++DQTAKLR+ALF+AFGPKGTDG+PS+QAISDSA Sbjct 111 VGRDPESVVIVGNGASATVQIRSETLSNDQTAKLRNALFDAFGPKGTDGKPSRQAISDSA 170 Query 179 VSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGF 238 VSETWG QIT KA+IALVVFL LV LYITVRYERYMT++AI AM FDLTVTAGVYSLVGF Sbjct 171 VSETWGDQITTKALIALVVFLALVGLYITVRYERYMTLAAIAAMFFDLTVTAGVYSLVGF 230 Query 239 EVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSIN 298 EVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSIN Sbjct 231 EVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSIN 290 Query 299 TSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTEL 358 TSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGI+IGTYSSIFFATPLLV+LRERTEL Sbjct 291 TSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIMIGTYSSIFFATPLLVSLRERTEL 350 Query 359 VRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKP 418 VR HTRRV++RR++G+ +P + + ++ A SKP Sbjct 351 VRTHTRRVMRRRSAGA-------------EPVEEAKATGDEAAADAAAPAASDKPAPSKP 397 Query 419 APGARPVRPVGTRRPTGKRNAGRR 442 APGARPVRP GTRRP+GKRNAGRR Sbjct 398 APGARPVRPTGTRRPSGKRNAGRR 421 >gi|254821449|ref|ZP_05226450.1| preprotein translocase subunit SecF [Mycobacterium intracellulare ATCC 13950] Length=432 Score = 605 bits (1561), Expect = 4e-171, Method: Compositional matrix adjust. Identities = 312/429 (73%), Positives = 354/429 (83%), Gaps = 5/429 (1%) Query 18 ELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAV 77 + TE TE++ T+ ++ + HHSFLSRLYTGTGAFEVVGRRRLWFG+SGAIVAV Sbjct 5 DATEITETSAGTTELTASAAGTAGAPHHSFLSRLYTGTGAFEVVGRRRLWFGISGAIVAV 64 Query 78 AIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYRALGSEPQSVVIVGAGA 133 A+ SI+ RGF+FGIDF GGTTVS P G+ +QV+DV+ + LG++ +SVV+VG GA Sbjct 65 ALLSILLRGFSFGIDFNGGTTVSMPANGTHGTVHTSQVQDVFRKTLGNDAESVVVVGNGA 124 Query 134 SATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVI 193 +ATVQIRSETL++DQT KLR+ALF+AFGPKG DG+PSKQAISDSAVSETWG QIT KA+ Sbjct 125 AATVQIRSETLSNDQTTKLRNALFDAFGPKGPDGKPSKQAISDSAVSETWGDQITMKALF 184 Query 194 ALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILG 253 ALVVFL LV +YITVRYERYMT++AI AM FDL VTAGVYSLVGFEVTPATVIGLLTILG Sbjct 185 ALVVFLALVGVYITVRYERYMTLAAIAAMFFDLAVTAGVYSLVGFEVTPATVIGLLTILG 244 Query 254 FSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVV 313 FSLYDTVIVFDKVEENTHGFQH +RTFAE+ANLAINQTFMRSINTSLIGVLPVLALMVV Sbjct 245 FSLYDTVIVFDKVEENTHGFQHKPKRTFAEEANLAINQTFMRSINTSLIGVLPVLALMVV 304 Query 314 AVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSG 373 AVWLLGVGTLKDLALVQLIGII+GTYSSIFFATPLLV++RERTELVR HTRRVL+RR G Sbjct 305 AVWLLGVGTLKDLALVQLIGIIVGTYSSIFFATPLLVSMRERTELVRTHTRRVLRRRAGG 364 Query 374 SPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRP 433 + AG+E+A ++ AS S P + SKPAPGARPVRP GTRRP Sbjct 365 ARAGAENAPDADDVADVPDEDAKADAAESASRPSGP-SKPAPSKPAPGARPVRPTGTRRP 423 Query 434 TGKRNAGRR 442 TGKRN GRR Sbjct 424 TGKRNVGRR 432 >gi|342858589|ref|ZP_08715244.1| preprotein translocase subunit SecF [Mycobacterium colombiense CECT 3035] gi|342134293|gb|EGT87473.1| preprotein translocase subunit SecF [Mycobacterium colombiense CECT 3035] Length=423 Score = 603 bits (1555), Expect = 2e-170, Method: Compositional matrix adjust. Identities = 314/431 (73%), Positives = 351/431 (82%), Gaps = 21/431 (4%) Query 16 AVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIV 75 A ELTEA+E A TD A+ HH FLSRLYTGTGAFEVVGRRRLWFG+SGAIV Sbjct 10 ATELTEASEGATELTDSG-----AAGQPHHGFLSRLYTGTGAFEVVGRRRLWFGISGAIV 64 Query 76 AVAIASIVFRGFTFGIDFKGGTTVSFPR----GSTQVAQVEDVYYRALGSEPQSVVIVGA 131 A+A+ SI+ RGFTFGIDF GGTTVS P G+ Q +QV +V+ +ALG++P+SVV+VG Sbjct 65 AIAVLSILLRGFTFGIDFNGGTTVSMPAAGKAGTVQTSQVSEVFRKALGNDPESVVVVGN 124 Query 132 GASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKA 191 GA ATVQIRSETLT+DQT KLR+ALF+AF PKG DG+PSKQAISD+AVSETWG QIT KA Sbjct 125 GAGATVQIRSETLTNDQTTKLRNALFDAFKPKGADGKPSKQAISDAAVSETWGDQITDKA 184 Query 192 VIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTI 251 +IAL VFLVLV +YI +RYERYM +SA+T M+FDL+VTAGVYSLVGFEVTPATVIGLLTI Sbjct 185 LIALAVFLVLVGVYIMIRYERYMAVSALTTMVFDLSVTAGVYSLVGFEVTPATVIGLLTI 244 Query 252 LGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALM 311 LGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLI VLPVLALM Sbjct 245 LGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLISVLPVLALM 304 Query 312 VVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRN 371 VVAVWLLGVGTLKDLALVQL+GI++GTYSSIFFATPLLVTLRERTELVR HTRRV++RR+ Sbjct 305 VVAVWLLGVGTLKDLALVQLVGILVGTYSSIFFATPLLVTLRERTELVRTHTRRVMRRRS 364 Query 372 SGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTR 431 GS A +E + +A + SKPAPGARPVRP GTR Sbjct 365 PGSRAAAETGD------------DEADTAEETEEAAAAPSKPAPSKPAPGARPVRPTGTR 412 Query 432 RPTGKRNAGRR 442 RPTGKRN GRR Sbjct 413 RPTGKRNVGRR 423 >gi|15827165|ref|NP_301428.1| preprotein translocase subunit SecF [Mycobacterium leprae TN] gi|221229643|ref|YP_002503059.1| preprotein translocase subunit SecF [Mycobacterium leprae Br4923] gi|13638490|sp|P38386.2|SECF_MYCLE RecName: Full=Protein translocase subunit SecF gi|3136010|emb|CAA19081.1| protein export membrane protein SecF [Mycobacterium leprae] gi|13092713|emb|CAC29996.1| putative protein-export membrane protein [Mycobacterium leprae] gi|219932750|emb|CAR70581.1| putative protein-export membrane protein [Mycobacterium leprae Br4923] Length=471 Score = 584 bits (1506), Expect = 8e-165, Method: Compositional matrix adjust. Identities = 329/456 (73%), Positives = 361/456 (80%), Gaps = 32/456 (7%) Query 10 DDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFL-------SRLYTGTGAFEVVG 62 DD AVE+TEA E AV + T D +++L H FL SRLYTGTG FEVVG Sbjct 25 DDNGAGAVEVTEAAEDAV-----ELTNDISTQLPQHGFLARFYTGLSRLYTGTGVFEVVG 79 Query 63 RRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP-------RGSTQVAQVEDVY 115 RRRLW+ V G IVAVA+ SI+ RGFTFGIDFKGGTTVS P G+ +VAQV DV+ Sbjct 80 RRRLWYSVGGVIVAVAVLSIIVRGFTFGIDFKGGTTVSMPVSPGVGGTGAIEVAQVADVF 139 Query 116 YRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAIS 175 + LGS+P+SVV+VG GASATV+I S+TL++DQT+KLR+ALF+AFGPKG D +PSKQAIS Sbjct 140 KKTLGSDPESVVVVGNGASATVRISSKTLSNDQTSKLRNALFDAFGPKGADAKPSKQAIS 199 Query 176 DSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSL 235 D+AVSETWGGQITKK VIALVVFLVLV LYITVRYERYM ISA+T M FDLTVTAGVYSL Sbjct 200 DAAVSETWGGQITKKVVIALVVFLVLVGLYITVRYERYMAISALTTMCFDLTVTAGVYSL 259 Query 236 VGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMR 295 VGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMR Sbjct 260 VGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMR 319 Query 296 SINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRER 355 SINTSLI VLPVLALMVVAVWLLGVGTLKDLALVQL+GII+GTYSSIFFATPLLVTLRER Sbjct 320 SINTSLISVLPVLALMVVAVWLLGVGTLKDLALVQLVGIIVGTYSSIFFATPLLVTLRER 379 Query 356 TELVRNHTRRVLKRRNSGSPAGSEDASTD---GGEQPAAADEQSLVGITQASSQSAPRAA 412 TELVR HTRRV+KRR GS G ++A + G +P E ASSQ A Sbjct 380 TELVRTHTRRVVKRRTLGSQVGKKNADSHVAAGTRKPQNQAESC----ADASSQEGTEVA 435 Query 413 QGS-----SKPAPGARPVRPVGTRRPTGKR-NAGRR 442 S SK APG RPVRP GTRRPTGKR N GRR Sbjct 436 TASVPTVLSKLAPGVRPVRPTGTRRPTGKRNNVGRR 471 >gi|254775914|ref|ZP_05217430.1| preprotein translocase subunit SecF [Mycobacterium avium subsp. avium ATCC 25291] Length=379 Score = 583 bits (1503), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 298/382 (79%), Positives = 325/382 (86%), Gaps = 14/382 (3%) Query 2 ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVV 61 ASKA G A E+TE + A TD D+ A+ L HSFLSRLYTGTGAFEVV Sbjct 6 ASKAAKG-------ATEITETSSGASELTDSDAA---AAGLPRHSFLSRLYTGTGAFEVV 55 Query 62 GRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYR 117 GRRRLWFG+SGAIVAVAI SI RGFTFGIDF GGTTVS P G+ AQV++V+ + Sbjct 56 GRRRLWFGISGAIVAVAILSIALRGFTFGIDFNGGTTVSMPAAGTHGTVHTAQVQEVFRK 115 Query 118 ALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDS 177 LG++P+SVV+VG GA+ATVQIRSETLT+DQT KLR+ALF+AFGPKG DG+PSKQAISDS Sbjct 116 TLGTDPESVVVVGNGAAATVQIRSETLTNDQTTKLRNALFDAFGPKGADGKPSKQAISDS 175 Query 178 AVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVG 237 AVSETWG QIT KA+IALVVFL LV LYITVRYERYMT++AI AM FDLTVTAGVYSLVG Sbjct 176 AVSETWGDQITDKALIALVVFLALVGLYITVRYERYMTLAAIAAMFFDLTVTAGVYSLVG 235 Query 238 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSI 297 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENT FQHT RRTFAEQANLAINQTFMRSI Sbjct 236 FEVTPATVIGLLTILGFSLYDTVIVFDKVEENTRDFQHTNRRTFAEQANLAINQTFMRSI 295 Query 298 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTE 357 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQL+GI++GTYSSIF ATPLLVTLRERTE Sbjct 296 NTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLVGILVGTYSSIFVATPLLVTLRERTE 355 Query 358 LVRNHTRRVLKRRNSGSPAGSE 379 LVR HTRRVLKRR G+ A +E Sbjct 356 LVRTHTRRVLKRRAGGARASAE 377 >gi|108799244|ref|YP_639441.1| preprotein translocase subunit SecF [Mycobacterium sp. MCS] gi|119868360|ref|YP_938312.1| preprotein translocase subunit SecF [Mycobacterium sp. KMS] gi|126434902|ref|YP_001070593.1| preprotein translocase subunit SecF [Mycobacterium sp. JLS] gi|108769663|gb|ABG08385.1| protein translocase subunit secF [Mycobacterium sp. MCS] gi|119694449|gb|ABL91522.1| protein translocase subunit secF [Mycobacterium sp. KMS] gi|126234702|gb|ABN98102.1| protein translocase subunit secF [Mycobacterium sp. JLS] Length=417 Score = 553 bits (1426), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 278/404 (69%), Positives = 323/404 (80%), Gaps = 13/404 (3%) Query 44 HHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP- 102 H F RLYTGTGAFEVVGRR++W+ +SG IV +A+ASI+ RGFTFGIDF+GGT V P Sbjct 22 QHGFFVRLYTGTGAFEVVGRRKMWYAISGVIVLIALASILIRGFTFGIDFEGGTKVGMPV 81 Query 103 ---RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEA 159 G+ +V QVE V+ LG P+SVVIVG+G+SATVQIRSETL++D+ ++LR ALF+ Sbjct 82 AGANGNAEVTQVETVFNETLGKPPESVVIVGSGSSATVQIRSETLSNDEASELRTALFDR 141 Query 160 FGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAI 219 F P G DGQPS+QAISDSAVSETWGGQITKKA+IAL VFLVL +LYI +RYER+M I+A+ Sbjct 142 FQPIGEDGQPSEQAISDSAVSETWGGQITKKALIALAVFLVLASLYIGIRYERWMAIAAM 201 Query 220 TAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRR 279 +LFDL VTAGVYSLVGFEV+PATVIGLLTILGFSLYDTVIVFDKVEENTHGF+HTTRR Sbjct 202 ATLLFDLVVTAGVYSLVGFEVSPATVIGLLTILGFSLYDTVIVFDKVEENTHGFEHTTRR 261 Query 280 TFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTY 339 TFAEQANLA+NQTFMRSINTSLI VLP++ALMV+AVWLLGVGTL DLALVQL+G+I+GTY Sbjct 262 TFAEQANLAVNQTFMRSINTSLISVLPIIALMVIAVWLLGVGTLMDLALVQLVGVIVGTY 321 Query 340 SSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVG 399 SSIFFATPLLV+LRERT+LVR+HTRRVL RR G + + A D ADE V Sbjct 322 SSIFFATPLLVSLRERTQLVRDHTRRVLNRRKPGRRSAAVTAPVD---DDTVADEPEKVT 378 Query 400 ITQASSQSAPRAAQGSSKPAPGARPVRPVG-TRRPTGKRNAGRR 442 A SAP + KPAPGA+P RP RPTGKR + R Sbjct 379 AASAPVTSAP-----ADKPAPGAKPSRPTSRPSRPTGKRTSRGR 417 >gi|120403569|ref|YP_953398.1| preprotein translocase subunit SecF [Mycobacterium vanbaalenii PYR-1] gi|119956387|gb|ABM13392.1| protein translocase subunit secF [Mycobacterium vanbaalenii PYR-1] Length=423 Score = 546 bits (1407), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 278/432 (65%), Positives = 328/432 (76%), Gaps = 32/432 (7%) Query 29 RTDGDSTT--------DTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIA 80 RTD D T A+ H F RLYTGTGAFEV+G+R+LW+ VS I+ V++ Sbjct 6 RTDADETAAVEAADLESAAAGAPKHGFFVRLYTGTGAFEVMGKRKLWYTVSAVIILVSLG 65 Query 81 SIVFRGFTFGIDFKGGTTVSFPRGSTQV--AQVEDVYYRALGSEPQSVVIVGAGASATVQ 138 +++ RGFTFGIDF+GGT VS PR Q +QVE V+ +G+ P++VV+VG+G SAT Q Sbjct 66 AMLLRGFTFGIDFEGGTKVSLPRSDAQATTSQVETVFTDTIGTPPEAVVVVGSGDSATFQ 125 Query 139 IRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVF 198 IRSETL +DQ +LR ALF+AF PKG DGQPS+QA+SDSAVSETWGGQIT+KA+IAL VF Sbjct 126 IRSETLDNDQIVELRKALFDAFQPKGADGQPSEQAVSDSAVSETWGGQITQKALIALAVF 185 Query 199 LVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYD 258 LVL A+YITVRYERYM I+A+ ++FDL VTAGVY+LVGFEVTPATVIGLLTILGFSLYD Sbjct 186 LVLAAIYITVRYERYMAIAALATLVFDLLVTAGVYALVGFEVTPATVIGLLTILGFSLYD 245 Query 259 TVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLL 318 TVIVFDKVEENT GF+HTTRRTFAEQANLA+NQTFMRSINTSLI VLP++ALMV+AVWLL Sbjct 246 TVIVFDKVEENTDGFEHTTRRTFAEQANLAVNQTFMRSINTSLISVLPIIALMVIAVWLL 305 Query 319 GVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNS------ 372 GVGTL DLALVQL+G+I+GTYSSIFFATPLLV+LRERTELV HTRRVL RR + Sbjct 306 GVGTLMDLALVQLVGVIVGTYSSIFFATPLLVSLRERTELVSKHTRRVLNRRKTAAARAG 365 Query 373 GSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTR- 431 G +D + DG +PA T A++ AP KP PGARPVRP +R Sbjct 366 GVEISDDDTAVDGDAEPA----------TVAATPPAPL----PDKPVPGARPVRPTSSRT 411 Query 432 -RPTGKRNAGRR 442 RP+GKR R Sbjct 412 GRPSGKRTPRNR 423 >gi|466825|gb|AAA17100.1| secD [Mycobacterium leprae] Length=394 Score = 540 bits (1392), Expect = 1e-151, Method: Compositional matrix adjust. Identities = 300/398 (76%), Positives = 328/398 (83%), Gaps = 20/398 (5%) Query 61 VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP-------RGSTQVAQVED 113 +GRRRLW+ V G IVAVA+ SI+ RGFTFGIDFKGGTTVS P G+ +VAQV D Sbjct 1 MGRRRLWYSVGGVIVAVAVLSIIVRGFTFGIDFKGGTTVSMPVSPGVGGTGAIEVAQVAD 60 Query 114 VYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQA 173 V+ + LGS+P+SVV+VG GASATV+I S+TL++DQT+KLR+ALF+AFGPKG D +PSKQA Sbjct 61 VFKKTLGSDPESVVVVGNGASATVRISSKTLSNDQTSKLRNALFDAFGPKGADAKPSKQA 120 Query 174 ISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVY 233 ISD+AVSETWGGQITKK VIALVVFLVLV LYITVRYERYM ISA+T M FDLTVTAGVY Sbjct 121 ISDAAVSETWGGQITKKVVIALVVFLVLVGLYITVRYERYMAISALTTMCFDLTVTAGVY 180 Query 234 SLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTF 293 SLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTF Sbjct 181 SLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTF 240 Query 294 MRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLR 353 MRSINTSLI VLPVLALMVVAVWLLGVGTLKDLALVQL+GII+GTYSSIFFATPLLVTLR Sbjct 241 MRSINTSLISVLPVLALMVVAVWLLGVGTLKDLALVQLVGIIVGTYSSIFFATPLLVTLR 300 Query 354 ERTELVRNHTRRVLKRRNSGSPAGSEDASTD---GGEQPAAADEQSLVGITQASSQSAPR 410 ERTELVR HTRRV+KRR GS G ++A + G +P E ASSQ Sbjct 301 ERTELVRTHTRRVVKRRTLGSQVGKKNADSHVAAGTRKPQNQAESC----ADASSQEGTE 356 Query 411 AAQGS-----SKPAPGARPVRPVGTRRPTGKR-NAGRR 442 A S SK APG RPVRP GTRRPTGKR N GRR Sbjct 357 VATASVPTVLSKLAPGVRPVRPTGTRRPTGKRNNVGRR 394 >gi|333991013|ref|YP_004523627.1| protein-export membrane protein SecF [Mycobacterium sp. JDM601] gi|333486981|gb|AEF36373.1| protein-export membrane protein SecF [Mycobacterium sp. JDM601] Length=436 Score = 530 bits (1366), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 289/442 (66%), Positives = 343/442 (78%), Gaps = 17/442 (3%) Query 2 ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVV 61 A +A DEA AVELTE T +AV T +T A + H FLSRLYTGTGAFEV+ Sbjct 10 AKRATKSAKDEA-GAVELTE-TGTAVEETARKTTG--APRPPQHGFLSRLYTGTGAFEVI 65 Query 62 GRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGS 121 G+RR+W+ +SGA+VA+AI SI+ RGFTFGIDF GGT VSFPRG T V QVE V+ +GS Sbjct 66 GKRRMWYAISGAMVAIAILSILIRGFTFGIDFAGGTKVSFPRGDTSVTQVEQVFRDTVGS 125 Query 122 EPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSE 181 P+SVV+VG G+SATVQ+R+ETLT++QT KLRDALF+AF P G DGQPSK AISDSAVSE Sbjct 126 SPESVVVVGNGSSATVQVRAETLTNEQTDKLRDALFDAFQPVGPDGQPSKLAISDSAVSE 185 Query 182 TWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVT 241 TWGGQIT+KAVIALVVFL+L +LYITVRYE YMT++A+ +M+FD+ VTAGVYSLVGFEVT Sbjct 186 TWGGQITQKAVIALVVFLLLASLYITVRYEWYMTLAAMISMVFDVVVTAGVYSLVGFEVT 245 Query 242 PATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSL 301 PATVIGLLTILGFS+YDTVIVFDKVEENTHGF+H TRRTFAE+ANLA+NQTFMRSINTSL Sbjct 246 PATVIGLLTILGFSIYDTVIVFDKVEENTHGFEHKTRRTFAEEANLAVNQTFMRSINTSL 305 Query 302 IGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRN 361 I LP+++LMVVAVWLLGVGTL+DLALVQL+G+++GTYSSI+ ATPLLVTLRERTELV+N Sbjct 306 ISALPIMSLMVVAVWLLGVGTLQDLALVQLVGVVVGTYSSIYLATPLLVTLRERTELVQN 365 Query 362 HTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPG 421 H RRV++RR + + + + A E + V + AP A Sbjct 366 HNRRVMRRRKAVAGSKTAPADDAADVDEGETTENAAVSTAATPAAPAPGAKP-------- 417 Query 422 ARPVRPVG--TRRPTGKRNAGR 441 VRP T+RPTGK AGR Sbjct 418 ---VRPTSRRTQRPTGKPGAGR 436 >gi|145224397|ref|YP_001135075.1| preprotein translocase subunit SecF [Mycobacterium gilvum PYR-GCK] gi|315444729|ref|YP_004077608.1| protein translocase subunit secF [Mycobacterium sp. Spyr1] gi|145216883|gb|ABP46287.1| protein translocase subunit secF [Mycobacterium gilvum PYR-GCK] gi|315263032|gb|ADT99773.1| protein translocase subunit secF [Mycobacterium sp. Spyr1] Length=422 Score = 530 bits (1366), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 272/427 (64%), Positives = 332/427 (78%), Gaps = 15/427 (3%) Query 20 TEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAI 79 T+ AV D ++ + A K H F RLYTGTGAFEVVG+R+LW+ VS IVAV+I Sbjct 7 TDVESGAVEAADLEAASINAPK---HGFFVRLYTGTGAFEVVGKRKLWYTVSALIVAVSI 63 Query 80 ASIVFRGFTFGIDFKGGTTVSFPRGSTQVA--QVEDVYYRALGSEPQSVVIVGAGASATV 137 +++ RGFTFGIDF+GGT VSFPR TQ QVE V+ +GS P++VVIVG+G SAT Sbjct 64 GAMILRGFTFGIDFEGGTKVSFPRSDTQATTQQVETVFNDTIGSPPEAVVIVGSGDSATF 123 Query 138 QIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVV 197 QIRSETLT+D+ +LR ALF+AF P G DGQPS+QA+SDSAVSETWGGQIT+KA+IALVV Sbjct 124 QIRSETLTNDEIIELRTALFDAFQPVGPDGQPSEQAVSDSAVSETWGGQITQKALIALVV 183 Query 198 FLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLY 257 FL+L A+YITVRYE M ++A+ ++FDL VTAGVY+LVGFEVTPATVIGLLTILGFSLY Sbjct 184 FLILAAIYITVRYEWSMALAALATLVFDLVVTAGVYALVGFEVTPATVIGLLTILGFSLY 243 Query 258 DTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWL 317 DTVIVFDKVEENT GF+HTTRRT+AEQANLA+NQTFMRSINTS+I VLP++ALMV+AVWL Sbjct 244 DTVIVFDKVEENTDGFEHTTRRTYAEQANLAVNQTFMRSINTSVISVLPIIALMVIAVWL 303 Query 318 LGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAG 377 LGVGTL DLALVQL+G+I+GTYSSI+FATPLLV+LRERTE VR H RRV RR + A Sbjct 304 LGVGTLMDLALVQLVGVIVGTYSSIYFATPLLVSLRERTEAVRKHNRRVHNRRQT---AA 360 Query 378 SEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTR--RPTG 435 ++ A + ++ + + +S +A + + + KPAPGARPVRP +R RP+G Sbjct 361 AKAAGVEVDDEISESATKS-----EAVAAAVAAQTAPADKPAPGARPVRPTSSRTGRPSG 415 Query 436 KRNAGRR 442 KR R Sbjct 416 KRTPRNR 422 >gi|118470626|ref|YP_887281.1| preprotein translocase subunit SecF [Mycobacterium smegmatis str. MC2 155] gi|118171913|gb|ABK72809.1| protein-export membrane protein SecF [Mycobacterium smegmatis str. MC2 155] Length=422 Score = 528 bits (1359), Expect = 9e-148, Method: Compositional matrix adjust. Identities = 287/442 (65%), Positives = 344/442 (78%), Gaps = 27/442 (6%) Query 5 AKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRR 64 AK +DD+ TS +AV T +++ D+A+ L H F RLYTGTGAFEV+G+R Sbjct 3 AKQTKDDDTTS---------TAVEATPIETSADSAA-LPKHGFFVRLYTGTGAFEVIGKR 52 Query 65 RLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP----RGSTQVAQVEDVYYRALG 120 +LW+ VSG IV +++ASI+ RGFTFGIDF+GGT VS P +G+ V QVEDV+ + LG Sbjct 53 KLWYAVSGIIVVISLASILLRGFTFGIDFEGGTKVSLPAAGAQGTITVQQVEDVFNQTLG 112 Query 121 SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS 180 P+SVV VG+G SAT+QIR+ETLT+++T +LR+ALF+ PKG DGQPSKQ ISDSAVS Sbjct 113 RSPESVVTVGSGGSATLQIRAETLTNEETEELRNALFDTLQPKGADGQPSKQVISDSAVS 172 Query 181 ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV 240 ETWGGQITKK VIALVVFLVL A+YIT RYERYM ISA+ M+FD+ VTAGVYSLVGFEV Sbjct 173 ETWGGQITKKMVIALVVFLVLAAIYITWRYERYMAISALATMVFDIVVTAGVYSLVGFEV 232 Query 241 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS 300 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGF+HTTRRTFAEQANLA+NQTFMRSINTS Sbjct 233 TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFEHTTRRTFAEQANLAVNQTFMRSINTS 292 Query 301 LIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR 360 LI VLP++ALMVVAVWLLGVGTL DLALVQL+G+I+GTYSSI+FATPLLV+LRERTELVR Sbjct 293 LISVLPIVALMVVAVWLLGVGTLMDLALVQLVGVIVGTYSSIYFATPLLVSLRERTELVR 352 Query 361 NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP 420 HT++VL RR +G A + A+ D E+ D +T +S+ +A + A G+ P Sbjct 353 KHTQKVLNRRQAGKGA-VKTAADDASEEADGGDT-----VTASSTPAAAKPAPGARPARP 406 Query 421 -GARPVRPVGTRRPTGKRNAGR 441 GAR T RP+GKR R Sbjct 407 SGAR------TGRPSGKRTNRR 422 >gi|169629963|ref|YP_001703612.1| preprotein translocase subunit SecF [Mycobacterium abscessus ATCC 19977] gi|169241930|emb|CAM62958.1| Probable protein-export membrane protein SecF [Mycobacterium abscessus] Length=424 Score = 509 bits (1310), Expect = 4e-142, Method: Compositional matrix adjust. Identities = 262/437 (60%), Positives = 318/437 (73%), Gaps = 23/437 (5%) Query 7 TGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRL 66 G + A + T+AT S A+ + +T S H FL RLYTGTGA +VVG+R L Sbjct 10 NGNGTDKDVAEDATDATAS-TAQEPKSTAVETVSAAPEHGFLYRLYTGTGAVDVVGKRTL 68 Query 67 WFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSV 126 WFG+SGA + VAI SI +GF FGIDF+GGT V FP+G V Q EDV+ + LG + +S+ Sbjct 69 WFGISGAFMVVAILSIAIKGFVFGIDFEGGTKVWFPKGDATVQQTEDVFSQTLGHDAESI 128 Query 127 VIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQ 186 V+ G G SA++QIR+E L ++Q++KL ALF+ F PKG DG+PS AISDS VSETWG Q Sbjct 129 VVTGTGDSASIQIRTEKLDNEQSSKLHKALFDRFAPKGPDGKPSIDAISDSDVSETWGSQ 188 Query 187 ITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVI 246 IT KA+ AL VFLVL +YI VRYERYM+++A+ A++FDL VTAGVYSLVGFEVTPATVI Sbjct 189 ITNKALWALGVFLVLAGIYIAVRYERYMSLAALAALVFDLLVTAGVYSLVGFEVTPATVI 248 Query 247 GLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLP 306 GLLTILGFSLYDTVIVFDKVEENTHGFQHT+RRT+AE ANLA+NQTFMRSINTSLI +P Sbjct 249 GLLTILGFSLYDTVIVFDKVEENTHGFQHTSRRTYAEHANLAVNQTFMRSINTSLISAIP 308 Query 307 VLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRV 366 VL+L+VVA+WLLGVGTLKDLALVQL+GI++GTYSSIFFATPLLV LRERT+LV +HT++V Sbjct 309 VLSLIVVAIWLLGVGTLKDLALVQLVGILVGTYSSIFFATPLLVALRERTDLVASHTKKV 368 Query 367 LKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP-GARPV 425 L RR +P AA + S++A A G+S A G RP Sbjct 369 LSRR-----------------KPDAAP----LADAGVGSKTAKVATSGTSDAAATGVRPA 407 Query 426 RPVGTRRPTGKRNAGRR 442 +P RP GKRN R Sbjct 408 KPKPGARPQGKRNTRRH 424 >gi|111023849|ref|YP_706821.1| preprotein translocase subunit SecF [Rhodococcus jostii RHA1] gi|110823379|gb|ABG98663.1| protein-export membrane protein [Rhodococcus jostii RHA1] Length=410 Score = 485 bits (1249), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 255/430 (60%), Positives = 317/430 (74%), Gaps = 26/430 (6%) Query 19 LTEATES-AVARTDGDSTTDTA----SKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGA 73 ++E+T S + ++TD +S+ + S + HS LSRLYTGTGAFEVVGRRR ++ ++G Sbjct 1 MSESTTSRSASQTDPESSLSDSGVNQSSMPQHSLLSRLYTGTGAFEVVGRRRFYYILTGT 60 Query 74 IVAVAIASIVFRGFTFGIDFKGGTTVSFPRGS-TQVAQVEDVYYRALGSEPQSVVIVGAG 132 IV +++ SI+ RGFT GIDF+GG+ + FP G + AQVE+VY ALG +P SV VG+G Sbjct 61 IVLISLLSILVRGFTLGIDFEGGSRIQFPAGGGVETAQVEEVYSEALGMDPVSVQTVGSG 120 Query 133 ASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAV 192 +SATVQIRSE L + Q L++AL++ F PK +DG SK IS + VSETWGGQIT+KA+ Sbjct 121 SSATVQIRSEALDAAQVVTLQNALYDEFQPKDSDGNVSKNVISVADVSETWGGQITQKAL 180 Query 193 IALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTIL 252 IAL+VFLV+V++YI VR+ER M I+AI A+ FD+ VTAGVYSLVGFEVTPATVIGLLTIL Sbjct 181 IALLVFLVIVSVYIAVRFERDMAIAAIVALFFDIAVTAGVYSLVGFEVTPATVIGLLTIL 240 Query 253 GFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMV 312 GFSLYD+V+VFDKVEENT G H TRRT+AEQANLAINQT MRSINT+LI VLPVLALMV Sbjct 241 GFSLYDSVVVFDKVEENTRGILHLTRRTYAEQANLAINQTLMRSINTTLISVLPVLALMV 300 Query 313 VAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNS 372 VAVW+LGVGTLKDLALVQL+GII+G YSSIFFATPLLVTL+ER V HTR+VL RR + Sbjct 301 VAVWMLGVGTLKDLALVQLVGIIVGAYSSIFFATPLLVTLKERWGPVAAHTRKVLARRAT 360 Query 373 GSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRR 432 + G+ A T E A+ + ++ PR ++ P PG+ R Sbjct 361 LAQGGAPKAGTPAAEVAASTADTAV-----------PRRRSAATAPTPGS---------R 400 Query 433 PTGKRNAGRR 442 PTGKRN R Sbjct 401 PTGKRNKKRH 410 >gi|226306415|ref|YP_002766375.1| protein-export membrane protein SecF [Rhodococcus erythropolis PR4] gi|226185532|dbj|BAH33636.1| protein-export membrane protein SecF [Rhodococcus erythropolis PR4] Length=407 Score = 479 bits (1233), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 249/407 (62%), Positives = 300/407 (74%), Gaps = 34/407 (8%) Query 33 DSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGID 92 DS D + + HS+LSRLYTGTGAFEVVGRRR ++G++GA+VA+A+ SI+ RGFTFGID Sbjct 30 DSGVDQGA-MPKHSWLSRLYTGTGAFEVVGRRRFYYGLTGALVAIALLSIILRGFTFGID 88 Query 93 FKGGTTVSFP-RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAK 151 F+GG+ + FP G + ++VE VY LG EP SV VG+GASATVQIRSETL + Q Sbjct 89 FEGGSRIQFPAEGGVETSEVETVYSDTLGFEPVSVQTVGSGASATVQIRSETLNATQIND 148 Query 152 LRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYE 211 L+ ALF+ F PK +G PS QAIS + VSETWGGQITKKA+IAL+VFLV+V++YI +R+E Sbjct 149 LQSALFDEFQPKDKNGNPSAQAISFADVSETWGGQITKKALIALIVFLVIVSIYIAIRFE 208 Query 212 RYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTH 271 R M ++AI A+ FD+ VTAGVYSLVGFEVTPATVIGLLTILGFSLYDTV+VFDKVEENT Sbjct 209 RDMAVAAIVALFFDIIVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVVVFDKVEENTR 268 Query 272 GFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQL 331 G H TRRT+ EQANLA+NQT MRSINT++I VLPV+ALMVVAVW+LGVGTLKDLALVQL Sbjct 269 GVLHLTRRTYGEQANLAVNQTLMRSINTTVISVLPVIALMVVAVWMLGVGTLKDLALVQL 328 Query 332 IGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAA 391 +GII+G YSSIFFATPLLV+++ER V HTR+VL RR + + G Sbjct 329 VGIIVGAYSSIFFATPLLVSMKERWGPVAAHTRKVLSRRATLAEKG-------------- 374 Query 392 ADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRPTGKRN 438 TQ + AP A + P PG RPTGKRN Sbjct 375 ---------TQTVAVGAPVARRAPVAPQPGV---------RPTGKRN 403 >gi|229491971|ref|ZP_04385788.1| preprotein translocase subunit SecF [Rhodococcus erythropolis SK121] gi|229321103|gb|EEN86907.1| preprotein translocase subunit SecF [Rhodococcus erythropolis SK121] Length=407 Score = 478 bits (1230), Expect = 9e-133, Method: Compositional matrix adjust. Identities = 249/407 (62%), Positives = 300/407 (74%), Gaps = 34/407 (8%) Query 33 DSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGID 92 DS D + + HS+LSRLYTGTGAFEVVG+RR ++G++GA+VA+A+ SI+ RGFTFGID Sbjct 30 DSGVDQGA-MPKHSWLSRLYTGTGAFEVVGKRRFYYGLTGALVAIALLSIILRGFTFGID 88 Query 93 FKGGTTVSFP-RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAK 151 F+GG+ + FP G + + VE VY LG EP SV VG+GASATVQIRSETL + Q Sbjct 89 FEGGSRIQFPAEGGVETSAVETVYSDTLGFEPVSVQTVGSGASATVQIRSETLNATQIND 148 Query 152 LRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYE 211 L+ ALF+ F PK +G PS QAIS + VSETWGGQITKKA+IAL+VFLV+V++YI +R+E Sbjct 149 LQSALFDEFQPKDKNGNPSAQAISFADVSETWGGQITKKALIALIVFLVIVSIYIAIRFE 208 Query 212 RYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTH 271 R M ++AI A+ FD+ VTAGVYSLVGFEVTPATVIGLLTILGFSLYDTV+VFDKVEENT Sbjct 209 RDMAVAAIVALFFDIIVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVVVFDKVEENTR 268 Query 272 GFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQL 331 G H TRRT+ EQANLA+NQT MRSINT++I VLPV+ALMVVAVW+LGVGTLKDLALVQL Sbjct 269 GVLHLTRRTYGEQANLAVNQTLMRSINTTVISVLPVIALMVVAVWMLGVGTLKDLALVQL 328 Query 332 IGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAA 391 +GII+G YSSIFFATPLLV+++ER V HTR+VL RR + + G Sbjct 329 VGIIVGAYSSIFFATPLLVSMKERWGPVAAHTRKVLSRRATLAGKG-------------- 374 Query 392 ADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRPTGKRN 438 TQ + AP A + P PGA RPTGKRN Sbjct 375 ---------TQTVAVGAPVARRAPVAPQPGA---------RPTGKRN 403 >gi|226366285|ref|YP_002784068.1| preprotein translocase subunit SecF [Rhodococcus opacus B4] gi|226244775|dbj|BAH55123.1| protein-export membrane protein SecF [Rhodococcus opacus B4] Length=408 Score = 472 bits (1215), Expect = 5e-131, Method: Compositional matrix adjust. Identities = 250/429 (59%), Positives = 317/429 (74%), Gaps = 26/429 (6%) Query 19 LTEATESAVARTDGDSTTDTA----SKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAI 74 ++E+T SA ++TD +S+ + + + HS+LSRLYTGTGAFEVVGRR+ ++ ++G I Sbjct 1 MSESTTSA-SQTDRESSLSDSGVNQTTMPQHSWLSRLYTGTGAFEVVGRRKFYYILTGTI 59 Query 75 VAVAIASIVFRGFTFGIDFKGGTTVSFPRGS-TQVAQVEDVYYRALGSEPQSVVIVGAGA 133 V +++ SI+ RGFT GIDF+GG+ + FP G AQVE+VY ALG +P SV VG+G+ Sbjct 60 VLISLLSILVRGFTLGIDFEGGSRIQFPAGGGVDTAQVENVYSEALGMDPVSVQTVGSGS 119 Query 134 SATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVI 193 SATVQIRSE L + Q L++AL++ F PK +DG ++ IS + VSETWGGQIT+KA+I Sbjct 120 SATVQIRSEALDAAQVVTLQNALYDEFQPKDSDGTVNENVISVADVSETWGGQITQKALI 179 Query 194 ALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILG 253 AL+VFLV+V++YI VR+ER M I+AI A+ FD+ VTAGVYSLVGFEVTPATVIGLLTILG Sbjct 180 ALLVFLVIVSIYIAVRFERDMAIAAIVALFFDIAVTAGVYSLVGFEVTPATVIGLLTILG 239 Query 254 FSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVV 313 FSLYD+V+VFDKVEENT G H TRRT+AEQANLA+NQT MRSINT+LI VLPVLALMVV Sbjct 240 FSLYDSVVVFDKVEENTRGILHLTRRTYAEQANLAVNQTLMRSINTTLISVLPVLALMVV 299 Query 314 AVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSG 373 AVW+LGVGTLKDLALVQL+GII+G YSSIFFATPLLVTL+ER V HTR+VL RR + Sbjct 300 AVWMLGVGTLKDLALVQLVGIIVGAYSSIFFATPLLVTLKERWGPVAAHTRKVLARRATL 359 Query 374 SPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRP 433 + G++ A A+ + ++ PR ++ PAPG+ RP Sbjct 360 AEGGAQKAGAPATAAAASTPQPAV-----------PRRRTEATAPAPGS---------RP 399 Query 434 TGKRNAGRR 442 TGKRN R Sbjct 400 TGKRNKKRH 408 >gi|54025660|ref|YP_119902.1| preprotein translocase subunit SecF [Nocardia farcinica IFM 10152] gi|54017168|dbj|BAD58538.1| putative protein exporter membrane protein [Nocardia farcinica IFM 10152] Length=414 Score = 449 bits (1155), Expect = 4e-124, Method: Compositional matrix adjust. Identities = 231/430 (54%), Positives = 308/430 (72%), Gaps = 29/430 (6%) Query 19 LTEATESAVARTDGDSTTDTA----------SKLGHHSFLSRLYTGTGAFEVVGRRRLWF 68 +T + R DG D A S H F +RLYTGTGA +V+G+RR+W+ Sbjct 1 MTNGNSTPSLRKDGGRDEDRAQSAVDDFAYGSGAPRHGFFNRLYTGTGAIDVIGKRRMWY 60 Query 69 GVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVI 128 ++ IV +++AS++ RGF FGIDF+GG+ + FP G ++VE VY+ LG++P SV Sbjct 61 AITALIVLISLASMLVRGFNFGIDFEGGSRIQFPAGDATTSEVETVYHNTLGTDPVSVQT 120 Query 129 VGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQIT 188 VG+G++AT+ IRSE L+++Q +L ALF F P G DGQPS+ AIS S VSETWG QIT Sbjct 121 VGSGSTATMLIRSEALSTEQADQLASALFTEFQPLGNDGQPSRAAISTSDVSETWGDQIT 180 Query 189 KKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGL 248 +KA+IAL+VFLV+V++YI VR+ER M I+A+ A++FD+ VTAG+YSLVG EVTPATVIG+ Sbjct 181 RKALIALLVFLVIVSVYIAVRFERDMAIAAMAALVFDVGVTAGIYSLVGLEVTPATVIGI 240 Query 249 LTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVL 308 LTILGFSLYD+V+VFDKVEENT G H RRT+AEQANLA+NQT MRSINT+LIG+LP++ Sbjct 241 LTILGFSLYDSVVVFDKVEENTRGILHLNRRTYAEQANLAVNQTLMRSINTALIGILPIV 300 Query 309 ALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLK 368 L+V+AVW+LGVGTLKDLALVQL+G+++GTYSSIFFATPLLV+L+ER V HTR+VL Sbjct 301 GLIVIAVWMLGVGTLKDLALVQLVGLLVGTYSSIFFATPLLVSLKERWGPVAAHTRKVLA 360 Query 369 RRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPV 428 +R++ A A ++ ++ A+ + P A G ++P P A P RP Sbjct 361 KRSN--------------VASARAAAEADRRVSVATGR--PAAPGGPARPRPNAAP-RP- 402 Query 429 GTRRPTGKRN 438 RP+GKR+ Sbjct 403 -GARPSGKRH 411 >gi|325672612|ref|ZP_08152308.1| protein-export membrane protein SecF [Rhodococcus equi ATCC 33707] gi|325556489|gb|EGD26155.1| protein-export membrane protein SecF [Rhodococcus equi ATCC 33707] Length=393 Score = 440 bits (1131), Expect = 3e-121, Method: Compositional matrix adjust. Identities = 242/429 (57%), Positives = 308/429 (72%), Gaps = 39/429 (9%) Query 17 VELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVA 76 ++++E+ SA + ++ +D A L HHS+L RLYTGTG FEVVGRR+ ++ ++GAIVA Sbjct 1 MKMSESNTSATSSGATEAASDRAV-LPHHSWLQRLYTGTGGFEVVGRRKFYYWLTGAIVA 59 Query 77 VAIASIVFRGFTFGIDFKGGTTVSFP--RGSTQVAQVEDVYYRALGSEPQSVVIVGAGAS 134 +++ SI+ RGF+ GI+F+GGT + FP G T QVE VY LG EP SV VG+G+S Sbjct 60 LSLLSILVRGFSLGIEFEGGTRIQFPTPEGVT-TEQVETVYSDTLGQEPVSVQTVGSGSS 118 Query 135 ATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIA 194 ++V+IRSE L + Q +L++AL++ F PK ++G SK AIS + VSETWGGQITKKA+IA Sbjct 119 SSVEIRSEALDAGQVNELQNALYDEFQPKDSNGNTSKNAISVADVSETWGGQITKKALIA 178 Query 195 LVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGF 254 LVVFLV+V++YI VR+ER M I+AI ++ FD+ VTAGVYSL+GFEVTPATVIGLLTILGF Sbjct 179 LVVFLVIVSIYIAVRFERDMAIAAIVSLFFDMIVTAGVYSLIGFEVTPATVIGLLTILGF 238 Query 255 SLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVA 314 SLYDTV+VFDKVEENT G H RRT+AEQANLA+NQT MRSINT++I +LPV+ALMVVA Sbjct 239 SLYDTVVVFDKVEENTRGILHLNRRTYAEQANLAVNQTLMRSINTTVISILPVIALMVVA 298 Query 315 VWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGS 374 VWLLG+GTLKDLALVQL+GII+G YSSIF ATP+LV+++ER V HT++VL +R Sbjct 299 VWLLGIGTLKDLALVQLVGIIVGAYSSIFTATPMLVSIKERWGPVAAHTKKVLAKR---- 354 Query 375 PAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPR-AAQGSSKPAPGARPVRPVGTRRP 433 AAA G +SQ PR +A P PGA P Sbjct 355 ---------------AAA------GTRVGASQPEPRVSAAAGPAPRPGA---------VP 384 Query 434 TGKRNAGRR 442 TGKRN R Sbjct 385 TGKRNKKRH 393 >gi|312139498|ref|YP_004006834.1| preprotein translocase subunit secf [Rhodococcus equi 103S] gi|311888837|emb|CBH48149.1| putative preprotein translocase subunit SecF [Rhodococcus equi 103S] Length=391 Score = 439 bits (1128), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 242/427 (57%), Positives = 306/427 (72%), Gaps = 39/427 (9%) Query 19 LTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVA 78 ++E+ SA + ++ +D A L HHS+L RLYTGTG FEVVGRR+ ++ ++GAIVA++ Sbjct 1 MSESNTSATSSGATEAASDRAV-LPHHSWLQRLYTGTGGFEVVGRRKFYYWLTGAIVALS 59 Query 79 IASIVFRGFTFGIDFKGGTTVSFP--RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASAT 136 + SI+ RGF+ GI+F+GGT + FP G T QVE VY LG EP SV VG+G+S++ Sbjct 60 LLSILVRGFSLGIEFEGGTRIQFPTPEGVT-TEQVETVYSDTLGQEPVSVQTVGSGSSSS 118 Query 137 VQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALV 196 V+IRSE L + Q +L++AL++ F PK ++G SK AIS + VSETWGGQITKKA+IALV Sbjct 119 VEIRSEALDAGQVNELQNALYDEFQPKDSNGNTSKNAISVADVSETWGGQITKKALIALV 178 Query 197 VFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSL 256 VFLV+V++YI VR+ER M I+AI ++ FD+ VTAGVYSL+GFEVTPATVIGLLTILGFSL Sbjct 179 VFLVIVSIYIAVRFERDMAIAAIVSLFFDMIVTAGVYSLIGFEVTPATVIGLLTILGFSL 238 Query 257 YDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVW 316 YDTV+VFDKVEENT G H RRT+AEQANLA+NQT MRSINT++I +LPV+ALMVVAVW Sbjct 239 YDTVVVFDKVEENTRGILHLNRRTYAEQANLAVNQTLMRSINTTVISILPVIALMVVAVW 298 Query 317 LLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPA 376 LLG+GTLKDLALVQL+GII+G YSSIF ATP+LV+++ER V HT++VL +R Sbjct 299 LLGIGTLKDLALVQLVGIIVGAYSSIFTATPMLVSIKERWGPVAAHTKKVLAKR------ 352 Query 377 GSEDASTDGGEQPAAADEQSLVGITQASSQSAPR-AAQGSSKPAPGARPVRPVGTRRPTG 435 AAA G +SQ PR +A P PGA PTG Sbjct 353 -------------AAA------GTRVGASQPEPRVSAAAGPAPRPGA---------VPTG 384 Query 436 KRNAGRR 442 KRN R Sbjct 385 KRNKKRH 391 >gi|333919487|ref|YP_004493068.1| protein-export membrane protein SecF [Amycolicicoccus subflavus DQS3-9A1] gi|333481708|gb|AEF40268.1| Protein-export membrane protein SecF [Amycolicicoccus subflavus DQS3-9A1] Length=420 Score = 431 bits (1108), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 224/404 (56%), Positives = 288/404 (72%), Gaps = 8/404 (1%) Query 39 ASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTT 98 A +L H F LYTGTGAF +VGR+ L+F ++GAIVA++I I+ RGFTFGIDF GGT Sbjct 20 ADELPRHGFFYGLYTGTGAFNIVGRKNLFFLIAGAIVAISIVGILIRGFTFGIDFAGGTR 79 Query 99 VSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFE 158 V FP G V + E+V+ LG P + +VG GA+A++QIRSE L Q ++ ALFE Sbjct 80 VDFPAGQVSVQEAEEVFTDTLGISPTTSQVVGTGATASIQIRSEALEEPQIQAVQRALFE 139 Query 159 AFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISA 218 AF P G P+ AIS + VSETWG Q+T++A+IAL+VF V+V YI +R+E YM ++A Sbjct 140 AFQPLDETGTPNINAISVAGVSETWGDQVTEQAIIALIVFFVIVCGYIALRFEWYMALAA 199 Query 219 ITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTR 278 + A+ FDLTVTAGVY++VGFEV+PAT+IGLLTILG+SLYDTV+VFDKV+ENT G TTR Sbjct 200 MAAVTFDLTVTAGVYAIVGFEVSPATIIGLLTILGYSLYDTVVVFDKVQENTRGVTQTTR 259 Query 279 RTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGT 338 RT+AEQANL +NQT MRS NTSLI VLP+ +LM+VAVW+LGVGTLKDLALVQL+G+++GT Sbjct 260 RTYAEQANLGVNQTLMRSFNTSLISVLPIASLMIVAVWMLGVGTLKDLALVQLVGVLVGT 319 Query 339 YSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPA---GSEDASTDGGEQPAAADEQ 395 YSSIFFATPLLV +++RTE ++ HT RV+++R + A + A T P AA Sbjct 320 YSSIFFATPLLVWMKQRTEEIKEHTSRVMEKRAERTGALAAATVGAGTAVTGNPVAARTP 379 Query 396 SLVGITQASSQSAPRAAQGSSKPAPGARPVR-PVGTRRPTGKRN 438 T + +++P A APG R R P RPTGKR Sbjct 380 ESASGTVSGEEASPPAG----GIAPGGRRGRAPSPGARPTGKRK 419 >gi|296393864|ref|YP_003658748.1| protein-export membrane protein SecF [Segniliparus rotundus DSM 44985] gi|296181011|gb|ADG97917.1| protein-export membrane protein SecF [Segniliparus rotundus DSM 44985] Length=367 Score = 415 bits (1067), Expect = 7e-114, Method: Compositional matrix adjust. Identities = 216/335 (65%), Positives = 256/335 (77%), Gaps = 1/335 (0%) Query 43 GHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP 102 G S +RLYTGTGAFE+VGRR+L F V+ I+ V +AS RGFTFGI+F GGT++SFP Sbjct 33 GRPSLFTRLYTGTGAFEIVGRRKLLFRVTAGILLVCLASFAIRGFTFGIEFVGGTSISFP 92 Query 103 R-GSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFG 161 G T V V A G EP SV VGAG+SATVQ+R+ L + QTAK+ DALF AF Sbjct 93 SDGKTDNGAVSRVVAEATGQEPVSVQTVGAGSSATVQVRTGDLNNAQTAKVSDALFNAFH 152 Query 162 PKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITA 221 PKG DG+PSK A++ S+VS +WGGQITK+A+IAL VFLV + +YI VR+E M ++AI Sbjct 153 PKGRDGKPSKAAVNVSSVSSSWGGQITKRALIALGVFLVAIGVYIAVRFEVDMAVAAIAT 212 Query 222 MLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTF 281 + FDL VTAGVYSLVGFEV PATVIGLLTILGFSLYDTV+VFDKV EN G TTRRT+ Sbjct 213 LFFDLVVTAGVYSLVGFEVVPATVIGLLTILGFSLYDTVVVFDKVSENVRGVTKTTRRTY 272 Query 282 AEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSS 341 AE ANLA+NQT MRSINT++IGVLPVL L+VVAV LLGVGTLKDLALVQL+G+I G YSS Sbjct 273 AELANLAMNQTMMRSINTTVIGVLPVLGLIVVAVLLLGVGTLKDLALVQLVGLISGAYSS 332 Query 342 IFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPA 376 IF ATPLLVTL+ER + + H +V RR + A Sbjct 333 IFVATPLLVTLKERRQEFKKHNAKVASRRRASDAA 367 >gi|326382131|ref|ZP_08203823.1| preprotein translocase subunit SecF [Gordonia neofelifaecis NRRL B-59395] gi|326198861|gb|EGD56043.1| preprotein translocase subunit SecF [Gordonia neofelifaecis NRRL B-59395] Length=362 Score = 409 bits (1051), Expect = 5e-112, Method: Compositional matrix adjust. Identities = 198/330 (60%), Positives = 259/330 (79%), Gaps = 7/330 (2%) Query 44 HHSFLSRLYTGTGAFEVVGRRR-LWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP 102 + SF SRLY+GTGAF+VVGRRR +W+ +SG ++ + I SI RGFTFGIDF+GGT VS P Sbjct 34 NQSFFSRLYSGTGAFDVVGRRRRMWYVISGVMMVICILSIAIRGFTFGIDFEGGTQVSLP 93 Query 103 -RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFG 161 RG ++V V+ LG +PQSV G+G SAT+Q+R+ETLT + +L AL EAF Sbjct 94 ARGDVTTSEVSKVFSDTLGKDPQSVQQAGSGNSATIQVRTETLTVQEGGQLTHALGEAFK 153 Query 162 PKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITA 221 P+ T +S S VS TWG +IT+K +IAL VFLV+ +YI +R+++ M+I+A+ + Sbjct 154 PEVTSAD-----VSVSDVSSTWGKEITRKMLIALAVFLVVAFIYIAIRFDKEMSIAAMAS 208 Query 222 MLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTF 281 ++FDL VTAG+YSLVG+E+TPATVIGLLTILGFS+YDTV+VFDKVEENT TTRRT+ Sbjct 209 LIFDLVVTAGIYSLVGWEMTPATVIGLLTILGFSVYDTVVVFDKVEENTRSVLATTRRTY 268 Query 282 AEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSS 341 AEQ NLA+NQT MRSINT++I +LP++ALMVVAVW+LGVGTLKDLAL+QL+G+I+GTYSS Sbjct 269 AEQTNLAVNQTLMRSINTTVISILPIIALMVVAVWMLGVGTLKDLALIQLVGVIVGTYSS 328 Query 342 IFFATPLLVTLRERTELVRNHTRRVLKRRN 371 +F A+PLLVT++ERT ++ HT +VL RR Sbjct 329 VFLASPLLVTMKERTTDIKRHTAKVLARRE 358 >gi|343924323|ref|ZP_08763874.1| protein-export membrane protein SecF [Gordonia alkanivorans NBRC 16433] gi|343765757|dbj|GAA10800.1| protein-export membrane protein SecF [Gordonia alkanivorans NBRC 16433] Length=401 Score = 408 bits (1049), Expect = 9e-112, Method: Compositional matrix adjust. Identities = 224/422 (54%), Positives = 281/422 (67%), Gaps = 59/422 (13%) Query 30 TDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTF 89 TD D +D + F +RLYTGTGAFE+VG+R++W+ V+ I+ + +ASI RGFTF Sbjct 29 TDADFVSDNS-----RGFFARLYTGTGAFEIVGKRKMWYIVTAVIMLICLASIAIRGFTF 83 Query 90 GIDFKGGTTVSFPRGSTQVA--QVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSD 147 GIDF+GGT +S P S+++ VE V ALG EP+SV GAG SATVQ+R+ETL Sbjct 84 GIDFEGGTQMSVPVASSEITADSVEKVVTEALGEEPESVQTAGAGNSATVQVRTETLDLA 143 Query 148 QTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYIT 207 Q + AL E FGP T S+ +ISD VS TWG +IT+K VIAL VFLV+V +YI Sbjct 144 QAEAVTRALTEEFGPALT---ASEVSISD--VSSTWGREITEKMVIALAVFLVIVFVYIA 198 Query 208 VRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVE 267 VR++R M+I+A+ +++FD+ TAGVYSLVG+EVTPATVIGLLTILGFSLYDTV+VFDKV+ Sbjct 199 VRFDREMSIAAMASLVFDIVATAGVYSLVGWEVTPATVIGLLTILGFSLYDTVVVFDKVQ 258 Query 268 ENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLA 327 ENT T+RRT+ EQANLA+NQT MRSINT++I VLP++ALMVVAVWLLGVGTLKDL Sbjct 259 ENTRSVLQTSRRTYGEQANLAVNQTLMRSINTTIISVLPIIALMVVAVWLLGVGTLKDLG 318 Query 328 LVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGE 387 L+QL+G+++GTYSSIF A+PLLVTL+ER + V HT +VL RR A + G Sbjct 319 LIQLVGVVVGTYSSIFLASPLLVTLKERRDDVSRHTAKVLNRR----------AGIESGV 368 Query 388 QPAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVR--------PVGTRRPTGKRNA 439 P+A GARPVR R PTGKR Sbjct 369 APSA-----------------------------GARPVRRRRGAADTDDADRVPTGKRRR 399 Query 440 GR 441 R Sbjct 400 NR 401 >gi|319947805|ref|ZP_08021999.1| preprotein translocase subunit SecF [Dietzia cinnamea P4] gi|319438529|gb|EFV93455.1| preprotein translocase subunit SecF [Dietzia cinnamea P4] Length=352 Score = 392 bits (1006), Expect = 8e-107, Method: Compositional matrix adjust. Identities = 194/326 (60%), Positives = 250/326 (77%), Gaps = 0/326 (0%) Query 46 SFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGS 105 S +RLYTGTGAF +V RR ++ ++ IVA+ +ASI+FRGFTFGIDF GGT +S P G+ Sbjct 21 SLFTRLYTGTGAFGIVANRRKFYVLTVVIVAICLASIIFRGFTFGIDFTGGTKLSMPAGN 80 Query 106 TQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGT 165 +V V ++G EPQ+V +VGAG + V++ + LTSD+ ++A+FE F P Sbjct 81 HDQDRVAAVVEESIGEEPQTVQVVGAGDARIVEVETRFLTSDEIRAAKNAMFEEFQPVTA 140 Query 166 DGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFD 225 DG S +AI DSA SE+WGGQ+T+ A+IAL VFLV+V YI R+E M +AI A+LFD Sbjct 141 DGVASVEAIGDSARSESWGGQVTQNALIALGVFLVIVFGYIAFRFEWQMATAAIVALLFD 200 Query 226 LTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQA 285 + TAGVYS++GFEVTPATVIGLLTILGFSLYDTVIVFDKVEENT G +HT RT+AE+A Sbjct 201 VVTTAGVYSIIGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTRGIRHTATRTYAEEA 260 Query 286 NLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFA 345 NL +NQT MRSI+T++IGVLP+LAL+V+AVW+LGVGTL DLALVQ++GI+ GT+SS+F A Sbjct 261 NLGVNQTLMRSIHTTIIGVLPLLALVVIAVWILGVGTLLDLALVQMVGIVTGTFSSVFLA 320 Query 346 TPLLVTLRERTELVRNHTRRVLKRRN 371 TPLLV+L+ R +R T +VL RR Sbjct 321 TPLLVSLKNRDPDIRRQTAKVLARRE 346 >gi|262202235|ref|YP_003273443.1| protein-export membrane protein SecF [Gordonia bronchialis DSM 43247] gi|262085582|gb|ACY21550.1| protein-export membrane protein SecF [Gordonia bronchialis DSM 43247] Length=421 Score = 382 bits (981), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 218/406 (54%), Positives = 271/406 (67%), Gaps = 32/406 (7%) Query 30 TDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTF 89 +D D +D+ SFLSRLYTGTGAFE+VGRRR+W+ V+ I+ + SI R FT Sbjct 46 SDADFVSDS-----KRSFLSRLYTGTGAFEIVGRRRMWYLVTAVILLICALSIGLRWFTL 100 Query 90 GIDFKGGTTVSFPRGSTQVAQ-VEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQ 148 GIDF+GGT +S P S A VE V ALGS P+SV G+GAS TVQ+R+E L Q Sbjct 101 GIDFEGGTQISIPVSSGITADSVEKVVTDALGSAPESVQTAGSGASETVQVRTEALELTQ 160 Query 149 TAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITV 208 + AL FGP T + IS S VS TWG +IT+K +IALVVFLV+V +YI V Sbjct 161 AEAVTRALVGEFGPGLT-----TEEISISDVSSTWGREITEKMLIALVVFLVIVFVYIAV 215 Query 209 RYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEE 268 R++R M+I+A+T++ FD+ TAGVYSLVG+EVTPATVIGLLTILGFSLYDTV+VFDKV E Sbjct 216 RFDREMSIAALTSLFFDIVCTAGVYSLVGWEVTPATVIGLLTILGFSLYDTVVVFDKVSE 275 Query 269 NTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLAL 328 NT T+RRT+ EQANLAINQT MRSINT++I VLP++ALMV+AVWLLGVGTLKDL L Sbjct 276 NTRSVLQTSRRTYGEQANLAINQTLMRSINTTVISVLPIIALMVIAVWLLGVGTLKDLGL 335 Query 329 VQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQ 388 +QL+G+++G YSSIF A PLLVTL+ER + HT+RVL RR A+ + G+ Sbjct 336 IQLVGVVVGAYSSIFLAAPLLVTLKERRPDIARHTKRVLDRR----------AAIEAGQT 385 Query 389 PAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRPT 434 PA + R + G+ A RP G RR T Sbjct 386 PA-----------EEFRPRTGRRSSGTRGEIIDAEAARPTGKRRRT 420 >gi|237785617|ref|YP_002906322.1| protein-export membrane protein [Corynebacterium kroppenstedtii DSM 44385] gi|237758529|gb|ACR17779.1| protein-export membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=412 Score = 379 bits (973), Expect = 6e-103, Method: Compositional matrix adjust. Identities = 181/344 (53%), Positives = 245/344 (72%), Gaps = 3/344 (0%) Query 47 FLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGST 106 F R+YTG G E V +RR W+G+ I+ + + SI+FRGFT GIDF+GGT ++ P G Sbjct 6 FFERIYTGEGGIEFVSQRRRWYGIYAIILVICLVSIIFRGFTLGIDFEGGTKITMPAGDV 65 Query 107 QVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTD 166 +V D ++ A G E Q V I+G+G + V+I S+ L D+ ++ R+ALF + PK Sbjct 66 SKTEVADTFHEATGVEAQQVQIIGSGNARNVEIESKHLNDDEISEAREALFSKYHPKDAS 125 Query 167 GQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDL 226 G+ + +I DS VS +WG IT + V+AL+VFL L+ LYITVR+ER M I+AI+A+ D Sbjct 126 GKETPDSIGDSTVSNSWGSTITHRMVLALIVFLALIFLYITVRFERDMAIAAISALAVDA 185 Query 227 TVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQAN 286 V +G+YS++GFEV+PA+VIGLLT+L +SLYDTV+VFDKV ENT G TT T+AEQAN Sbjct 186 IVVSGLYSIIGFEVSPASVIGLLTVLSYSLYDTVVVFDKVHENTAGLTKTTTSTYAEQAN 245 Query 287 LAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFAT 346 LA+NQT MRSI+TSL +LP+ ALMVVAVWLLGVGTLKDL+LVQL+G+I GT+SSIF AT Sbjct 246 LAVNQTMMRSISTSLFSILPIGALMVVAVWLLGVGTLKDLSLVQLLGVIEGTFSSIFLAT 305 Query 347 PLLVTLRERTELVRNHTRRVLKRRNSGSPAGSED---ASTDGGE 387 P+LV+L+ R + HT+RV + R + S + ++DG E Sbjct 306 PILVSLKSRQKKYSEHTKRVEESRKAESSNQENELVAVTSDGSE 349 >gi|145295777|ref|YP_001138598.1| preprotein translocase subunit SecF [Corynebacterium glutamicum R] gi|140845697|dbj|BAF54696.1| hypothetical protein [Corynebacterium glutamicum R] gi|344044899|gb|EGV40573.1| preprotein translocase subunit SecF [Corynebacterium glutamicum S9114] Length=403 Score = 375 bits (962), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 191/409 (47%), Positives = 266/409 (66%), Gaps = 18/409 (4%) Query 35 TTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFK 94 +T + S+ + LYTG G + + + +LW+ ++G ++ ++I I RGF+ IDF+ Sbjct 10 STQSVKPAKKRSWFNSLYTGDGGIDFIAKTKLWYWITGILLVISILFIAIRGFSLSIDFQ 69 Query 95 GGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRD 154 GGT +S P QVE+ + A G P+ V IVG+G + T++I SE L+ + K R Sbjct 70 GGTKMSMPASDYSTEQVEETFTEATGITPEIVQIVGSGDARTLEIHSERLSDEDVEKARL 129 Query 155 ALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYM 214 A++E + P ++GQPS AI +S VSE+WG ITK+ V+AL+ FLV+ A+YI R ER M Sbjct 130 AIYEEYQPLNSEGQPSPDAIGNSTVSESWGSTITKRMVLALIAFLVIAAIYIAFRLEREM 189 Query 215 TISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQ 274 I+A+ A++ D V AG+Y+++GFEV+PATVIGLLT+L FS+YDTV+VFDKV ENT GF+ Sbjct 190 AIAAMAALVVDGIVIAGIYAVIGFEVSPATVIGLLTVLTFSIYDTVVVFDKVRENTEGFE 249 Query 275 HTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGI 334 + RRT+AEQANLA+NQTFMRSI+T++I LP++ALMVVAVW++GVGTLKDLAL+QLIG+ Sbjct 250 GSRRRTYAEQANLAVNQTFMRSISTTIISALPIIALMVVAVWMMGVGTLKDLALIQLIGV 309 Query 335 IIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADE 394 I GT+SS+F ATPLLV+L+ R + HT V+K R+ S D QP A Sbjct 310 IEGTFSSVFLATPLLVSLKNRLSKTKAHTASVMKLRDGQSTL------IDATPQPNA--- 360 Query 395 QSLVGITQASSQSAPRAAQGSSKPAPGARPV-RP-VGTRRPTGKRNAGR 441 AS+ G + AP R V +P V R +G GR Sbjct 361 -------DASAHGTESDTDGVTPEAPAKRTVSKPIVDDHRSSGTWRPGR 402 >gi|38233956|ref|NP_939723.1| preprotein translocase subunit SecF [Corynebacterium diphtheriae NCTC 13129] gi|38200218|emb|CAE49902.1| Putative protein export membrane protein [Corynebacterium diphtheriae] Length=370 Score = 374 bits (959), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 186/363 (52%), Positives = 254/363 (70%), Gaps = 5/363 (1%) Query 45 HSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRG 104 +S LS+LYTG G + VGRRR W+ + IVA+ +I RGF+ GIDF GGT ++ P Sbjct 4 NSVLSKLYTGDGGLDFVGRRRTWYRTTLIIVAICFIAIAVRGFSLGIDFVGGTKMNMPAA 63 Query 105 STQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKG 164 + ++V D + A G EP+ V IVG+G + ++I SE L+ DQ ++ R ALFE + P G Sbjct 64 QLETSEVADTFKDATGIEPELVQIVGSGDTRILEINSERLSEDQISQARVALFEKYQPVG 123 Query 165 TDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLF 224 + GQP+ AI DS VSE+WG IT++ +I++ VFL V +YITVR E+ M ++AI A+L Sbjct 124 SQGQPTPDAIGDSTVSESWGSTITQRMLISMFVFLAAVFVYITVRLEKEMAVAAIVALLV 183 Query 225 DLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQ 284 DL V +GVY+LVGFEV+PAT+IGLLT+L FSLYDTVIVFDKV ENT G+ RT+AE Sbjct 184 DLIVISGVYALVGFEVSPATIIGLLTVLAFSLYDTVIVFDKVRENTAGYLGNRTRTYAEH 243 Query 285 ANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFF 344 ANLA+NQT MRSI+T++I LP++AL+V+AVWL+GVGTLKDLALVQLIG+I GT+SS+F Sbjct 244 ANLAVNQTVMRSISTTIISALPIIALIVIAVWLMGVGTLKDLALVQLIGVIEGTFSSVFL 303 Query 345 ATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQAS 404 ATP+LV+L+ R++ H R+V R G+E EQ A + ++ V Q + Sbjct 304 ATPILVSLKNRSKKTAEHNRQVEMHR-----CGAEAQDDSAPEQSAESTQKRTVSGPQVT 358 Query 405 SQS 407 + + Sbjct 359 TST 361 >gi|227542213|ref|ZP_03972262.1| preprotein translocase subunit SecF [Corynebacterium glucuronolyticum ATCC 51866] gi|227182042|gb|EEI63014.1| preprotein translocase subunit SecF [Corynebacterium glucuronolyticum ATCC 51866] Length=412 Score = 372 bits (955), Expect = 7e-101, Method: Compositional matrix adjust. Identities = 194/410 (48%), Positives = 268/410 (66%), Gaps = 17/410 (4%) Query 29 RTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFT 88 R D D T +T +HSFL+RLYTG G + VGRR+LW+ ++ ++AV I+FRGFT Sbjct 6 RVDNDVTPET-----NHSFLTRLYTGEGGIDFVGRRKLWYIITLVVLAVCALGIIFRGFT 60 Query 89 FGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQ 148 GIDF+GGT ++ P + A V + A G P+ V IVGA S ++I SE L+ +Q Sbjct 61 LGIDFQGGTKMTMPAANLDTAAVSRTFEEATGVTPEGVQIVGAQDSRILEIASERLSDEQ 120 Query 149 TAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITV 208 R+AL+ F PK G+ + A+ DS VSE+WG IT + ++A FL+L+ +YI + Sbjct 121 IMSAREALYTEFQPKDASGEVTPDAVGDSTVSESWGSTITNRMIVAFGAFLLLIFIYIAI 180 Query 209 RYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEE 268 R+ER M+++AI A+ D AG Y+L G EVTPA VIGLLT+L FSLYDTV+VFDKV+E Sbjct 181 RFERDMSVAAIAALGVDGVFIAGCYALFGMEVTPAVVIGLLTVLAFSLYDTVVVFDKVQE 240 Query 269 NTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLAL 328 NT GF+HTTR+T+AE ANLA+NQT MRSI+T++I LP++ALM+VAVWL+GVGTLKDLA+ Sbjct 241 NTEGFEHTTRKTYAELANLAVNQTVMRSISTTVISALPIIALMIVAVWLMGVGTLKDLAV 300 Query 329 VQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGG-- 386 VQLIG+I GT+SS+F ATPLLV+++ R + + H +V R + + + + G Sbjct 301 VQLIGVIEGTFSSVFLATPLLVSMKNRQKKFKKHNLQVAAVRGTDVDGATYQEAVEAGLV 360 Query 387 --EQPAAADEQS-LVGI-----TQASSQSAPRAAQGSSKPAPGA--RPVR 426 + AA DE +VG T +S+ A R + + GA RP R Sbjct 361 NEDGTAAVDEHDEVVGANGLRPTGVNSEDAERFNTPDGETSLGASWRPTR 410 >gi|227488790|ref|ZP_03919106.1| preprotein translocase subunit SecF [Corynebacterium glucuronolyticum ATCC 51867] gi|227091212|gb|EEI26524.1| preprotein translocase subunit SecF [Corynebacterium glucuronolyticum ATCC 51867] Length=412 Score = 371 bits (953), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 194/410 (48%), Positives = 267/410 (66%), Gaps = 17/410 (4%) Query 29 RTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFT 88 R D D T +T +HSFL+RLYTG G + VGRR+LW+ ++ ++AV I+FRGFT Sbjct 6 RVDNDVTPET-----NHSFLTRLYTGEGGIDFVGRRKLWYIITLVVLAVCALGIIFRGFT 60 Query 89 FGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQ 148 GIDF+GGT ++ P + A V + A G P+ V IVGA S ++I SE L+ +Q Sbjct 61 LGIDFQGGTKMTMPAANLDTAAVSRTFEEATGVTPEGVQIVGAQDSRILEIASERLSDEQ 120 Query 149 TAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITV 208 R+AL+ F PK G+ + A+ DS VSE+WG IT + ++A FL+L+ +YI + Sbjct 121 IMSAREALYTEFQPKDASGEVTPDAVGDSTVSESWGSTITNRMIVAFGAFLLLIFIYIAI 180 Query 209 RYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEE 268 R+ER M+++AI A+ D AG Y+L G EVTPA VIGLLT+L FSLYDTV+VFDKV+E Sbjct 181 RFERDMSVAAIAALGVDGVFIAGCYALFGMEVTPAVVIGLLTVLAFSLYDTVVVFDKVQE 240 Query 269 NTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLAL 328 NT GF+HTTR+T+AE ANLA+NQT MRSI+T++I LP++ALM+VAVWL+GVGTLKDLA+ Sbjct 241 NTEGFEHTTRKTYAELANLAVNQTVMRSISTTVISALPIIALMIVAVWLMGVGTLKDLAV 300 Query 329 VQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGG-- 386 VQLIG+I GT+SS+F ATPLLV+++ R + + H +V R + + + + G Sbjct 301 VQLIGVIEGTFSSVFLATPLLVSMKNRQKKFKKHNLQVAAVRGTDVDGATYQEAVEAGLV 360 Query 387 --EQPAAADEQS-LVGI-----TQASSQSAPRAAQGSSKPAPGA--RPVR 426 + AA DE VG T +S+ A R + + GA RP R Sbjct 361 NEDGTAAVDEHDEAVGANGLRPTGVNSEDAERFNTPDGETSLGASWRPTR 410 >gi|336325686|ref|YP_004605652.1| preprotein translocase subunit [Corynebacterium resistens DSM 45100] gi|336101668|gb|AEI09488.1| preprotein translocase subunit [Corynebacterium resistens DSM 45100] Length=1074 Score = 371 bits (952), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 189/382 (50%), Positives = 266/382 (70%), Gaps = 6/382 (1%) Query 39 ASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTT 98 A++ F ++Y G G F+++ +RR W+ + A++AVAI +I+ RGFT GIDF+GGT Sbjct 617 ATEKSSMGFFDKMYNGMGGFQIIPKRRKWYTLMVAMLAVAIGAILIRGFTLGIDFQGGTR 676 Query 99 VSFPRGS--TQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDAL 156 ++ P TQ +QVE+ + A+G PQS VG+G S +++ SE L+ DQ ++R AL Sbjct 677 MAMPPADNVTQ-SQVEETFEEAIGVRPQSAQTVGSGDSRVIEVTSERLSDDQIRQVRSAL 735 Query 157 FEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTI 216 FE F PK G+ S+ A++DS VSE+WG IT++ +++L VFL++V YITVR ER M + Sbjct 736 FEKFQPKNAAGEVSESAVTDSTVSESWGKSITQRMLLSLGVFLLIVFAYITVRLERDMAL 795 Query 217 SAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHT 276 +AI +L DL V AG+Y+L+GFEV+PATVIGLLTIL FSLYD V+VFDK+ ENT G + Sbjct 796 AAIVTILLDLAVVAGLYALIGFEVSPATVIGLLTILAFSLYDVVVVFDKIRENTAGLFGS 855 Query 277 TRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIII 336 TR TF EQANLA+NQT MRSINTS+ +P+++L+VVAV L+GVGTLKDLALVQ IG+I+ Sbjct 856 TRSTFDEQANLALNQTIMRSINTSIFSAVPIVSLLVVAVGLMGVGTLKDLALVQFIGVIV 915 Query 337 GTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGG--EQPAAADE 394 GT++SIFFA PLL +++ R R+H RVLK R G+ + E++ +G + AA Sbjct 916 GTFNSIFFAAPLLASIKARQRKYRDHNARVLKARE-GAVSDGEESGENGAVDAKDDAARN 974 Query 395 QSLVGITQASSQSAPRAAQGSS 416 QS G A +++ + A+ S Sbjct 975 QSDAGDDGADHETSGKVAEARS 996 Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust. Identities = 62/250 (25%), Positives = 112/250 (45%), Gaps = 23/250 (9%) Query 164 GTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAML 223 G +G+P + + +S T G K +IA V L+L+ALY V Y I+ ++ + Sbjct 381 GENGEPGG---TTTTISPTLGEASLKAGLIAGAVGLLLIALYALVYYRGLGIIALVSLLS 437 Query 224 -----FDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTR 278 + L V G + +G+ + A + GL+ LG + VI F+++++ +T Sbjct 438 SLALVYGLIVLLGRW--IGYSLDLAGIAGLIIGLGTTADSFVIYFERIKDEIR--DGSTF 493 Query 279 RTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAV----WLLGVGTLKDLALVQLIG- 333 R+ +A +T + SL G L + L + V + LG+ T+ DL + L+ Sbjct 494 RSAVPRAWQRARRTIVTGNAVSLFGALVLYFLAIGEVKGFAFTLGLTTVFDLVIAFLVSA 553 Query 334 -IIIGTYSSIFFATPLLVTLRE--RTELVRNHTRRVLKRRNSGS---PAGSEDASTDGGE 387 ++I FA P L L R + + +R G+ +G A+ D + Sbjct 554 PLVILASRRPTFANPRLNGLGSAFRASDAQGASGGKRRRNEKGAVTGDSGETSATKDADQ 613 Query 388 QPAAADEQSL 397 +PAA ++ S+ Sbjct 614 KPAATEKSSM 623 >gi|300858590|ref|YP_003783573.1| protein-export membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|300686044|gb|ADK28966.1| protein-export membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302330859|gb|ADL21053.1| Protein-export membrane protein secF [Corynebacterium pseudotuberculosis 1002] Length=373 Score = 371 bits (952), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 187/371 (51%), Positives = 254/371 (69%), Gaps = 7/371 (1%) Query 48 LSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQ 107 L++LYTG G + VGRRR W+ + AI+ V + SI RGF+ GIDF GGT ++ P G+ + Sbjct 7 LNKLYTGGGGLDFVGRRRTWYWTTAAILLVCLVSIALRGFSLGIDFVGGTKINMPAGNLE 66 Query 108 VAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDG 167 A V + A G EP+ V IVGAG + ++I S+ L+ +Q R ALFEA+ P G Sbjct 67 TASVSKTFEDATGVEPKLVQIVGAGDTRILEINSKRLSEEQIGSARQALFEAYKPADASG 126 Query 168 QPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLT 227 + + AI DS VSE+WG ITK+ +I++ VFLV V +YI VR ER M ++AITA+L D Sbjct 127 KQTPDAIGDSTVSESWGSTITKRMLISMFVFLVAVFIYIAVRLEREMAVAAITALLIDFV 186 Query 228 VTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANL 287 AG+Y+L+GFEV+PAT+IGLLT+L FSLYDTVIVFDKV ENT G+ RT+AE ANL Sbjct 187 AIAGIYALLGFEVSPATIIGLLTVLAFSLYDTVIVFDKVRENTAGYLGNRSRTYAEHANL 246 Query 288 AINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATP 347 A+NQT MRSI+T++I LP+LAL+V+AVWLLGVGTLKDLALVQLIG+I GT+SS+F ATP Sbjct 247 AVNQTVMRSISTTVISALPILALIVIAVWLLGVGTLKDLALVQLIGVIEGTFSSVFLATP 306 Query 348 LLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQS 407 +LV+L+ R++ + H V + RN + A +D+ + G+ + QS + S Sbjct 307 ILVSLKNRSKETKAHNAEVEEHRNPQNKA--KDSVENSGDVYVSDLSQS-----HKRTVS 359 Query 408 APRAAQGSSKP 418 +P + S +P Sbjct 360 SPTSTGASWRP 370 >gi|302206302|gb|ADL10644.1| Protein-export membrane protein secF [Corynebacterium pseudotuberculosis C231] gi|308276544|gb|ADO26443.1| Protein-export membrane protein secF [Corynebacterium pseudotuberculosis I19] gi|341824986|gb|AEK92507.1| Protein-export membrane protein secF [Corynebacterium pseudotuberculosis PAT10] Length=373 Score = 370 bits (949), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 186/371 (51%), Positives = 254/371 (69%), Gaps = 7/371 (1%) Query 48 LSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQ 107 L++LYTG G + VGRRR W+ + AI+ V + SI RGF+ GIDF GGT ++ P G+ + Sbjct 7 LNKLYTGGGGLDFVGRRRTWYWTTAAILLVCLVSIALRGFSLGIDFVGGTKINMPAGNLE 66 Query 108 VAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDG 167 A V + A G EP+ V IVGAG + ++I S+ L+ +Q R ALFEA+ P G Sbjct 67 TASVSKTFEDATGVEPKLVQIVGAGDTRILEINSKRLSEEQIGSARQALFEAYKPADASG 126 Query 168 QPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLT 227 + + AI DS VSE+WG ITK+ +I++ VFLV V +YI VR ER M ++AITA+L D Sbjct 127 KQTPDAIGDSTVSESWGSTITKRMLISMFVFLVAVFIYIAVRLEREMAVAAITALLIDFV 186 Query 228 VTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANL 287 AG+Y+L+GFEV+PAT+IGLLT+L FSLYDTVIVFD+V ENT G+ RT+AE ANL Sbjct 187 AIAGIYALLGFEVSPATIIGLLTVLAFSLYDTVIVFDRVRENTAGYLGNRSRTYAEHANL 246 Query 288 AINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATP 347 A+NQT MRSI+T++I LP+LAL+V+AVWLLGVGTLKDLALVQLIG+I GT+SS+F ATP Sbjct 247 AVNQTVMRSISTTVISALPILALIVIAVWLLGVGTLKDLALVQLIGVIEGTFSSVFLATP 306 Query 348 LLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQS 407 +LV+L+ R++ + H V + RN + A +D+ + G+ + QS + S Sbjct 307 ILVSLKNRSKETKAHNAEVEEHRNPQNKA--KDSVENSGDVYVSDLSQS-----HKRTVS 359 Query 408 APRAAQGSSKP 418 +P + S +P Sbjct 360 SPTSTGASWRP 370 >gi|19552867|ref|NP_600869.1| preprotein translocase subunit SecF [Corynebacterium glutamicum ATCC 13032] gi|62390538|ref|YP_225940.1| preprotein translocase subunit SecF [Corynebacterium glutamicum ATCC 13032] gi|13346827|gb|AAK19843.1|AF331924_8 SecF [Corynebacterium glutamicum] gi|21324426|dbj|BAB99050.1| Preprotein translocase subunit SecF [Corynebacterium glutamicum ATCC 13032] gi|41325876|emb|CAF20039.1| Preprotein translocase subunit SecF [Corynebacterium glutamicum ATCC 13032] Length=403 Score = 370 bits (949), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 190/405 (47%), Positives = 265/405 (66%), Gaps = 20/405 (4%) Query 35 TTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFK 94 +T + S+ + LYTG G + + + +LW+ ++G ++ ++I I RGF+ IDF+ Sbjct 10 STQSVKPAKKRSWFNSLYTGDGGIDFIAKTKLWYWITGILLVISILFIAIRGFSLSIDFQ 69 Query 95 GGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRD 154 GGT +S P QVE+ + A G P+ V IVG+G + T++I SE L+ + K R Sbjct 70 GGTKMSMPASDYSTEQVEETFTEATGITPEIVQIVGSGDARTLEIYSERLSDEDVEKARL 129 Query 155 ALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYM 214 A++E + P ++GQPS AI +S VSE+WG IT++ V+AL+ FLV+ A+YI R ER M Sbjct 130 AIYEEYQPLNSEGQPSPDAIGNSTVSESWGSTITQRMVLALIAFLVIAAIYIAFRLEREM 189 Query 215 TISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQ 274 I+A+ A++ D V AG+Y+++G EV+PATVIGLLT+L FS+YDTV+VFDKV ENT GF+ Sbjct 190 AIAAMAALVVDGIVIAGIYAVIGLEVSPATVIGLLTVLTFSIYDTVVVFDKVRENTEGFE 249 Query 275 HTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGI 334 + RRT+AEQANLA+NQTFMRSI+T++I LP++ALMVVAVW++GVGTLKDLAL+QLIG+ Sbjct 250 GSRRRTYAEQANLAVNQTFMRSISTTIISALPIIALMVVAVWMMGVGTLKDLALIQLIGV 309 Query 335 IIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGS------PAGSEDASTDGGEQ 388 I GT+SS+F ATPLLV+L+ R + HT V+K R+ S P + DAS G E Sbjct 310 IEGTFSSVFLATPLLVSLKNRLSKTKAHTASVMKLRDGQSTLIDATPHTNADASAHGTES 369 Query 389 PAAADEQSLVGITQASSQSAPRAAQGSSKPAPGARPVRPVGTRRP 433 T + AP A + SKP R GT RP Sbjct 370 D-----------TDGVTPEAP-AKRTVSKPIVDDH--RSSGTWRP 400 >gi|334563775|ref|ZP_08516766.1| preprotein translocase subunit SecF [Corynebacterium bovis DSM 20582] Length=369 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 185/326 (57%), Positives = 238/326 (74%), Gaps = 3/326 (0%) Query 47 FLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFP--RG 104 FL R+Y G G F VG RR WF + G +V + +I+ RGF+ GIDF+GGT ++ P G Sbjct 37 FLERMYNGEGGFAFVGHRRRWFTIFGIVVVACLVTILVRGFSLGIDFEGGTRMTVPPDNG 96 Query 105 STQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKG 164 + + + V ++ A G E QS +VG+GAS T++I SE L+++Q K R ALF AF PK Sbjct 97 ADETS-VSRTFHDATGVEAQSTQVVGSGASQTIEITSERLSNEQVDKARVALFNAFHPKD 155 Query 165 TDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLF 224 +GQ + +I DS VSE+WGG ITK+ VIAL VFL+L+ YI +R+ER M ISAI A+L Sbjct 156 NNGQVTPDSIGDSTVSESWGGSITKRMVIALGVFLLLIFAYIAIRFERDMAISAIVALLV 215 Query 225 DLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQ 284 DL V +G+YSLVGFEV+PATVIGLLTIL +SLYDTV+VFDKV ENT +TR T+ EQ Sbjct 216 DLIVVSGIYSLVGFEVSPATVIGLLTILAYSLYDTVVVFDKVRENTADVFGSTRSTYGEQ 275 Query 285 ANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFF 344 NLA+NQT MRSINTSL ++P+ +L+VVAVWL+GVGTLKDLALVQLIG+I GT+SSIF Sbjct 276 VNLAVNQTVMRSINTSLFSIVPIASLLVVAVWLMGVGTLKDLALVQLIGVIAGTFSSIFL 335 Query 345 ATPLLVTLRERTELVRNHTRRVLKRR 370 A+PLLVTL+ + R H +V + R Sbjct 336 ASPLLVTLKSVQKAYREHDAKVARAR 361 >gi|300787169|ref|YP_003767460.1| preprotein translocase SecF subunit [Amycolatopsis mediterranei U32] gi|299796683|gb|ADJ47058.1| preprotein translocase SecF subunit [Amycolatopsis mediterranei U32] gi|340528668|gb|AEK43873.1| preprotein translocase subunit SecF [Amycolatopsis mediterranei S699] Length=404 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 191/363 (53%), Positives = 248/363 (69%), Gaps = 8/363 (2%) Query 30 TDGDSTTDTASKLG-HHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFT 88 TD + +K G S RLY GTGAF+VVG+R+ W+ A+V V +AS++FRGF Sbjct 8 TDAEGNAKVTAKPGKRESVFHRLYVGTGAFDVVGKRKRWYIFFAALVLVCLASMIFRGFN 67 Query 89 FGIDFKGGTTVSFP----RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETL 144 GI+F+GGT + P G Q ++ + +ALG VG GA++T+QIR++TL Sbjct 68 IGIEFEGGTQIQMPANGIHGVITEDQAKESFQKALGHPAAETQKVGTGAASTIQIRTDTL 127 Query 145 TSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVAL 204 + AKL+ LF+ GPKGT GQPS QAISDSAVS +WGG+I++KA+IAL VFLV V + Sbjct 128 NAADVAKLKQGLFQDLGPKGTSGQPSVQAISDSAVSASWGGEISQKALIALAVFLVAVVI 187 Query 205 YITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFD 264 ++ + ++ M +A+ ++L D+ VTAGVYSLVGFEVTPATVIGLLTILGFSLYDTV+VFD Sbjct 188 FLAIYFDLRMATAALVSLLHDILVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVVVFD 247 Query 265 KVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLK 324 KV ENT G TRRT+AE ANLA+NQT MRS NT+ I +LP+L L++V LLG GTL+ Sbjct 248 KVRENTRGLLGLTRRTYAEAANLALNQTLMRSFNTAFIALLPILGLLIVGYVLLGSGTLQ 307 Query 325 DLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSG--SPAGSE-DA 381 DLALVQL G ++G SS+ ATPLLV + R + RV +RR S AG + DA Sbjct 308 DLALVQLTGTLVGVLSSVALATPLLVDFKMRDPKYQQQAERVRQRRVSQERKAAGEDFDA 367 Query 382 STD 384 S D Sbjct 368 SDD 370 >gi|296139652|ref|YP_003646895.1| protein-export membrane protein SecF [Tsukamurella paurometabola DSM 20162] gi|296027786|gb|ADG78556.1| protein-export membrane protein SecF [Tsukamurella paurometabola DSM 20162] Length=374 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 202/350 (58%), Positives = 258/350 (74%), Gaps = 4/350 (1%) Query 33 DSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGFTFGID 92 D+TT + + F ++LYTGTGAF+++GRR ++ +G I+ +AI I+ GF ID Sbjct 3 DTTTQVSEQEKKAGFFTKLYTGTGAFDIIGRRNRYYIATGIIIVIAILGILIPGFKLSID 62 Query 93 FKGGTTVSFPRGSTQV--AQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTA 150 F+GGT VSFP GS Q A+ +V A G P +V G+GAS T QI + L++DQ Sbjct 63 FEGGTQVSFPVGSAQADTAKAREVVQSATGIAPSAVQTAGSGASQTYQISTSELSADQIT 122 Query 151 KLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRY 210 K R ALFE F P G DG+PS IS SAVS TWGGQIT++A++ L+VFLVLV +YI VR+ Sbjct 123 KARAALFEQFQPPGRDGKPSANTISFSAVSSTWGGQITQRALLGLIVFLVLVTIYIAVRF 182 Query 211 -ERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVFDKVEEN 269 E M ++A+ ++ FD+ VTAGVY+ GFEV+PATVIGLLTILGFSLYDTV+VFDKVEEN Sbjct 183 RELEMALAALASLFFDVIVTAGVYAWSGFEVSPATVIGLLTILGFSLYDTVVVFDKVEEN 242 Query 270 THGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTLKDLALV 329 G HT RRT+AEQANLA+NQT MRSINT++I LP++ALMVVA W+LGVGTL DL LV Sbjct 243 VRGVLHTNRRTYAEQANLAVNQTLMRSINTTVISALPIVALMVVAAWILGVGTLMDLGLV 302 Query 330 QLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVL-KRRNSGSPAGS 378 QL+G+++GTYSS+FFA+PLLVTL+ER + HT++VL KRR G A S Sbjct 303 QLVGVVVGTYSSVFFASPLLVTLKERKPEYKAHTQKVLNKRRAVGVEAES 352 >gi|257055541|ref|YP_003133373.1| protein translocase subunit secF [Saccharomonospora viridis DSM 43017] gi|256585413|gb|ACU96546.1| protein translocase subunit secF [Saccharomonospora viridis DSM 43017] Length=414 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 186/359 (52%), Positives = 253/359 (71%), Gaps = 8/359 (2%) Query 32 GDSTTDTASKLGH----HSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIASIVFRGF 87 G+ST +T + G S RLYTGTGAF++VG RR WF GA+V V S+ +GF Sbjct 2 GESTVNTTNAAGQEPAKQSVFQRLYTGTGAFDIVGHRRKWFLAFGALVLVCFVSMGLKGF 61 Query 88 TFGIDFKGGTTVSFP----RGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSET 143 FGI F+GGT + P G+ + ++V+ LG P VG G +AT+Q+RSET Sbjct 62 NFGIAFEGGTQIQLPAQGANGTITTEEAQEVFSDTLGRNPAETQQVGTGEAATIQLRSET 121 Query 144 LTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVA 203 LT + A+++ ALF P GTDGQPS++AISDS VS +WGG+I+++A+IAL VFLVLVA Sbjct 122 LTPAEVAQVKQALFTELQPLGTDGQPSERAISDSRVSASWGGEISRQALIALAVFLVLVA 181 Query 204 LYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVTPATVIGLLTILGFSLYDTVIVF 263 +++ + +E++M ++A+ A+L D+ VTAGVYSLVGF+VTPAT IGLLTILG+SLYDTV+VF Sbjct 182 VFLILYFEKWMALAALVALLHDVVVTAGVYSLVGFQVTPATAIGLLTILGYSLYDTVVVF 241 Query 264 DKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLALMVVAVWLLGVGTL 323 DKV+ENT G + TRRT+AE ANLA+NQT MRSINTS+I +LPVL ++V+ LLG GTL Sbjct 242 DKVKENTRGILNLTRRTYAEAANLAVNQTLMRSINTSVIALLPVLGMLVIGYLLLGSGTL 301 Query 324 KDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDAS 382 +DLALV + G++ GT+SS+ ATPLLV+ + R + +V RR + SE+ + Sbjct 302 QDLALVLITGMVAGTFSSVCLATPLLVSFKMRDPKYQKQAEKVYARREQLARKRSENGA 360 Lambda K H 0.318 0.132 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 909569037286 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40