BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2592c Length=344 Score E Sequences producing significant alignments: (Bits) Value gi|15609729|ref|NP_217108.1| Holliday junction DNA helicase RuvB... 669 0.0 gi|306785394|ref|ZP_07423716.1| holliday junction DNA helicase r... 668 0.0 gi|183982125|ref|YP_001850416.1| Holliday junction DNA helicase ... 642 0.0 gi|118617341|ref|YP_905673.1| Holliday junction DNA helicase Ruv... 639 0.0 gi|41407136|ref|NP_959972.1| Holliday junction DNA helicase B [M... 628 4e-178 gi|254822006|ref|ZP_05227007.1| Holliday junction DNA helicase R... 627 6e-178 gi|15827160|ref|NP_301423.1| Holliday junction DNA helicase RuvB... 626 2e-177 gi|296170844|ref|ZP_06852405.1| crossover junction ATP-dependent... 623 1e-176 gi|120403561|ref|YP_953390.1| Holliday junction DNA helicase Ruv... 622 2e-176 gi|118473727|ref|YP_887264.1| Holliday junction DNA helicase Ruv... 622 3e-176 gi|145224406|ref|YP_001135084.1| Holliday junction DNA helicase ... 620 8e-176 gi|240173174|ref|ZP_04751832.1| Holliday junction DNA helicase R... 619 3e-175 gi|342858581|ref|ZP_08715236.1| Holliday junction DNA helicase R... 617 1e-174 gi|108799234|ref|YP_639431.1| Holliday junction DNA helicase Ruv... 615 2e-174 gi|306780630|ref|ZP_07418967.1| holliday junction DNA helicase R... 613 2e-173 gi|333991018|ref|YP_004523632.1| Holliday junction DNA helicase ... 608 5e-172 gi|169629966|ref|YP_001703615.1| Holliday junction DNA helicase ... 592 3e-167 gi|466823|gb|AAA17098.1| ruvB [Mycobacterium leprae] 585 2e-165 gi|111023846|ref|YP_706818.1| Holliday junction DNA helicase Ruv... 569 2e-160 gi|226366282|ref|YP_002784065.1| Holliday junction DNA helicase ... 568 6e-160 gi|229491963|ref|ZP_04385780.1| holliday junction DNA helicase R... 566 2e-159 gi|226306412|ref|YP_002766372.1| Holliday junction DNA helicase ... 566 3e-159 gi|325672615|ref|ZP_08152311.1| crossover junction ATP-dependent... 550 9e-155 gi|312139495|ref|YP_004006831.1| holliday junction DNA helicase ... 548 3e-154 gi|343924326|ref|ZP_08763877.1| Holliday junction ATP-dependent ... 548 4e-154 gi|262202232|ref|YP_003273440.1| Holliday junction DNA helicase ... 544 6e-153 gi|54025665|ref|YP_119907.1| Holliday junction DNA helicase RuvB... 539 3e-151 gi|339299088|gb|AEJ51198.1| holliday junction DNA helicase ruvB ... 537 8e-151 gi|333919484|ref|YP_004493065.1| Holliday junction ATP-dependent... 537 1e-150 gi|296139645|ref|YP_003646888.1| Holliday junction DNA helicase ... 533 1e-149 gi|325001438|ref|ZP_08122550.1| Holliday junction DNA helicase R... 530 2e-148 gi|134098597|ref|YP_001104258.1| Holliday junction DNA helicase ... 526 1e-147 gi|291008206|ref|ZP_06566179.1| Holliday junction DNA helicase R... 526 1e-147 gi|331697369|ref|YP_004333608.1| Holliday junction ATP-dependent... 525 3e-147 gi|256375825|ref|YP_003099485.1| Holliday junction DNA helicase ... 523 1e-146 gi|257055538|ref|YP_003133370.1| Holliday junction DNA helicase ... 520 2e-145 gi|302527850|ref|ZP_07280192.1| Holliday junction DNA helicase R... 516 2e-144 gi|300787172|ref|YP_003767463.1| holliday junction DNA helicase ... 514 6e-144 gi|340528671|gb|AEK43876.1| holliday junction DNA helicase RuvB ... 514 1e-143 gi|68536131|ref|YP_250836.1| Holliday junction DNA helicase B [C... 510 1e-142 gi|258653555|ref|YP_003202711.1| Holliday junction DNA helicase ... 509 3e-142 gi|326382128|ref|ZP_08203820.1| Holliday junction DNA helicase R... 507 1e-141 gi|311739556|ref|ZP_07713391.1| crossover junction ATP-dependent... 504 1e-140 gi|227542216|ref|ZP_03972265.1| Holliday junction DNA helicase B... 504 1e-140 gi|227488787|ref|ZP_03919103.1| Holliday junction DNA helicase B... 503 1e-140 gi|255325095|ref|ZP_05366201.1| holliday junction DNA helicase R... 503 2e-140 gi|336325688|ref|YP_004605654.1| Holliday junction DNA helicase ... 502 3e-140 gi|172040616|ref|YP_001800330.1| Holliday junction DNA helicase ... 500 2e-139 gi|227504982|ref|ZP_03935031.1| crossover junction endodeoxyribo... 499 2e-139 gi|296393860|ref|YP_003658744.1| Holliday junction DNA helicase ... 499 4e-139 >gi|15609729|ref|NP_217108.1| Holliday junction DNA helicase RuvB [Mycobacterium tuberculosis H37Rv] gi|15842132|ref|NP_337169.1| Holliday junction DNA helicase RuvB [Mycobacterium tuberculosis CDC1551] gi|31793776|ref|NP_856269.1| Holliday junction DNA helicase RuvB [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=344 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL Sbjct 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE Sbjct 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE Sbjct 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 >gi|306785394|ref|ZP_07423716.1| holliday junction DNA helicase ruvB [Mycobacterium tuberculosis SUMu003] gi|306789994|ref|ZP_07428316.1| holliday junction DNA helicase ruvB [Mycobacterium tuberculosis SUMu004] gi|306794075|ref|ZP_07432377.1| holliday junction DNA helicase ruvB [Mycobacterium tuberculosis SUMu005] 11 more sequence titles Length=344 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/344 (99%), Positives = 344/344 (100%), Gaps = 0/344 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 MTERSDR+VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL Sbjct 1 MTERSDRNVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE Sbjct 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE Sbjct 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 >gi|183982125|ref|YP_001850416.1| Holliday junction DNA helicase RuvB [Mycobacterium marinum M] gi|238690933|sp|B2HN63.1|RUVB_MYCMM RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|183175451|gb|ACC40561.1| Holliday junction DNA helicase RuvB [Mycobacterium marinum M] Length=345 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/343 (96%), Positives = 337/343 (99%), Gaps = 0/343 (0%) Query 2 TERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILL 61 T+ +R+VSPALTVG+GD+DVSLRPRSLREFIGQPRVREQLQLVI+GAKNRGGTPDHILL Sbjct 3 TDPDEREVSPALTVGDGDVDVSLRPRSLREFIGQPRVREQLQLVIQGAKNRGGTPDHILL 62 Query 62 SGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 121 SGPPGLGKTSLAMIIAAELGSSLR+TSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR Sbjct 63 SGPPGLGKTSLAMIIAAELGSSLRMTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 122 Query 122 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAH 181 PAEEMLYLAMEDFRVDVVVGKGPGATSIPL+VAPFTLVGATTRSGALTGPLRDRFGFTAH Sbjct 123 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFTAH 182 Query 182 MDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 241 MDFYEPAELERVL RSAGILGI+LGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG Sbjct 183 MDFYEPAELERVLVRSAGILGIQLGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 242 Query 242 VITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEV 301 VITRDVAKAAL VYDVDELGLDRLDRAVLSALTRSF GGPVGVSTLAVAVGEEA+TVEEV Sbjct 243 VITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFSGGPVGVSTLAVAVGEEASTVEEV 302 Query 302 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPP GA+QPGLFE Sbjct 303 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPAGANQPGLFE 345 >gi|118617341|ref|YP_905673.1| Holliday junction DNA helicase RuvB [Mycobacterium ulcerans Agy99] gi|171460876|sp|A0PPD3.1|RUVB_MYCUA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|118569451|gb|ABL04202.1| Holliday junction DNA helicase RuvB [Mycobacterium ulcerans Agy99] Length=345 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/343 (95%), Positives = 337/343 (99%), Gaps = 0/343 (0%) Query 2 TERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILL 61 T+ +R+VSPALTVG+GD+DVSLRPRSLREFIGQPRVREQLQLVI+GAKNRGGTPDHILL Sbjct 3 TDPDEREVSPALTVGDGDVDVSLRPRSLREFIGQPRVREQLQLVIQGAKNRGGTPDHILL 62 Query 62 SGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 121 SGPPGLGKTSLA+IIAAELGSSLR+TSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR Sbjct 63 SGPPGLGKTSLAVIIAAELGSSLRMTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 122 Query 122 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAH 181 PAEEMLYLAMEDFRVDVVVGKGPGATSIPL+VAPFTLVGATTRSGALTGPLRDRFGFTAH Sbjct 123 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFTAH 182 Query 182 MDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 241 MDFYEPAELERVL RSAGILGI+LGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG Sbjct 183 MDFYEPAELERVLVRSAGILGIQLGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 242 Query 242 VITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEV 301 VITRDVAKAAL VYDVDELGLDRLDRAVLSALTRSF GGPVGVSTLAVAVGEEA+TVEEV Sbjct 243 VITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFSGGPVGVSTLAVAVGEEASTVEEV 302 Query 302 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPP GA+QPGLFE Sbjct 303 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPAGANQPGLFE 345 >gi|41407136|ref|NP_959972.1| Holliday junction DNA helicase B [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464703|ref|YP_882655.1| Holliday junction DNA helicase RuvB [Mycobacterium avium 104] gi|254775921|ref|ZP_05217437.1| Holliday junction DNA helicase RuvB [Mycobacterium avium subsp. avium ATCC 25291] gi|47606088|sp|P61535.1|RUVB_MYCPA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|166231502|sp|A0QIB7.1|RUVB_MYCA1 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|41395487|gb|AAS03355.1| RuvB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165990|gb|ABK66887.1| holliday junction DNA helicase RuvB [Mycobacterium avium 104] gi|336461533|gb|EGO40401.1| Holliday junction DNA helicase, RuvB subunit [Mycobacterium avium subsp. paratuberculosis S397] Length=351 Score = 628 bits (1619), Expect = 4e-178, Method: Compositional matrix adjust. Identities = 325/345 (95%), Positives = 332/345 (97%), Gaps = 3/345 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 + SDRDVS AL GEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS Sbjct 7 DWSDRDVSGALVPGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 66 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP Sbjct 67 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 126 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM Sbjct 127 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 186 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 DFYEPAEL++VLARSAGILGIELGA+A EIARRSRGTPRIANRLLRRVRDFAEVRADGV Sbjct 187 DFYEPAELQQVLARSAGILGIELGAEAAEEIARRSRGTPRIANRLLRRVRDFAEVRADGV 246 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 ITRDVAKAAL VYDVDELGLDRLDRAVL+ALTRSFGGGPVGVSTLAVAVGEEAATVEEVC Sbjct 247 ITRDVAKAALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 306 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 EPFLVRAGMVARTPRGRVATA AWTHLGM PP GA+ QPGLF+ Sbjct 307 EPFLVRAGMVARTPRGRVATAQAWTHLGMVPPAGAAGLGQPGLFD 351 >gi|254822006|ref|ZP_05227007.1| Holliday junction DNA helicase RuvB [Mycobacterium intracellulare ATCC 13950] Length=351 Score = 627 bits (1618), Expect = 6e-178, Method: Compositional matrix adjust. Identities = 326/343 (96%), Positives = 329/343 (96%), Gaps = 3/343 (0%) Query 5 SDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGP 64 SDRDVS AL GEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGP Sbjct 9 SDRDVSGALAPGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGP 68 Query 65 PGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAE 124 PGLGKTSLAMIIAAELGSSLR+TSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAE Sbjct 69 PGLGKTSLAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAE 128 Query 125 EMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDF 184 EMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDF Sbjct 129 EMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDF 188 Query 185 YEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVIT 244 YEPAELERVLARSAGILGIELG DA EIARRSRGTPRIANRLLRRVRDFAEVRADGVIT Sbjct 189 YEPAELERVLARSAGILGIELGGDAAEEIARRSRGTPRIANRLLRRVRDFAEVRADGVIT 248 Query 245 RDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEP 304 RDVAK+AL VYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVCEP Sbjct 249 RDVAKSALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEP 308 Query 305 FLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 FLVRAGMVARTPRGRVATA AWTHLGM PP GA+ QPGLFE Sbjct 309 FLVRAGMVARTPRGRVATAQAWTHLGMAPPAGAAGLGQPGLFE 351 >gi|15827160|ref|NP_301423.1| Holliday junction DNA helicase RuvB [Mycobacterium leprae TN] gi|221229638|ref|YP_002503054.1| Holliday junction DNA helicase RuvB [Mycobacterium leprae Br4923] gi|13432236|sp|P40833.2|RUVB_MYCLE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|254767434|sp|B8ZUI2.1|RUVB_MYCLB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|13092708|emb|CAC29991.1| Holliday junction helicase component [Mycobacterium leprae] gi|219932745|emb|CAR70576.1| Holliday junction helicase component [Mycobacterium leprae Br4923] Length=349 Score = 626 bits (1614), Expect = 2e-177, Method: Compositional matrix adjust. Identities = 323/342 (95%), Positives = 328/342 (96%), Gaps = 3/342 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 DRDVSPALTVGE DIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRG TPDHILLSGPP Sbjct 7 DRDVSPALTVGEADIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGATPDHILLSGPP 66 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIAAELGSSLR+TSGPALERAGDLA MLSNLVEHDVLFIDEIHRIARPAEE Sbjct 67 GLGKTSLAMIIAAELGSSLRMTSGPALERAGDLAVMLSNLVEHDVLFIDEIHRIARPAEE 126 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDV+VGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY Sbjct 127 MLYLAMEDFRVDVIVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 186 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 EP ELE VLAR+AGILGIELG +AGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR Sbjct 187 EPTELEGVLARAAGILGIELGVEAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 246 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 DVAKAAL VYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVCEPF Sbjct 247 DVAKAALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPF 306 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGA---SQPGLFE 344 LVRAGMVARTPRGRVATA AWT+L MTPPVG SQPGLFE Sbjct 307 LVRAGMVARTPRGRVATAQAWTYLCMTPPVGVTGLSQPGLFE 348 >gi|296170844|ref|ZP_06852405.1| crossover junction ATP-dependent DNA helicase RuvB [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894500|gb|EFG74241.1| crossover junction ATP-dependent DNA helicase RuvB [Mycobacterium parascrofulaceum ATCC BAA-614] Length=347 Score = 623 bits (1607), Expect = 1e-176, Method: Compositional matrix adjust. Identities = 321/347 (93%), Positives = 332/347 (96%), Gaps = 3/347 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 M + ++R++SPAL VGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL Sbjct 1 MMDDAERELSPALAVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEPAELE VLARSAGILGIELGA+A EIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMDFYEPAELELVLARSAGILGIELGAEAAEEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 GVITRDVAK+AL VYDVDELGLDRLDRAVL+ALTRSFGGGPVGVSTLAVAVGEEA TVEE Sbjct 241 GVITRDVAKSALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGVSTLAVAVGEEATTVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 VCEPFLVRAGMVARTPRGRVATA AWTHLGM+PP A+ Q GLF+ Sbjct 301 VCEPFLVRAGMVARTPRGRVATAQAWTHLGMSPPASATGLGQAGLFD 347 >gi|120403561|ref|YP_953390.1| Holliday junction DNA helicase RuvB [Mycobacterium vanbaalenii PYR-1] gi|171769147|sp|A1T884.1|RUVB_MYCVP RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|119956379|gb|ABM13384.1| Holliday junction DNA helicase subunit RuvB [Mycobacterium vanbaalenii PYR-1] Length=355 Score = 622 bits (1604), Expect = 2e-176, Method: Compositional matrix adjust. Identities = 320/345 (93%), Positives = 330/345 (96%), Gaps = 3/345 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 E +R++S ALTVGEGDID SLRPRSL EFIGQPRVREQLQLV+EGAKNRGGTPDHILLS Sbjct 11 EPDEREMSAALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKNRGGTPDHILLS 70 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP Sbjct 71 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 130 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM Sbjct 131 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 190 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 DFYEP+ELERVLARSAGILGIELGA+AGAEIARRSRGTPRIANRLLRRVRD+AEVRADGV Sbjct 191 DFYEPSELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGV 250 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 ITRD+AK ALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVC Sbjct 251 ITRDIAKYALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVC 310 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPP---VGASQPGLFE 344 EPFLVRAGM+ARTPRGRVATA AWTHLGM PP VG Q GLF+ Sbjct 311 EPFLVRAGMIARTPRGRVATAQAWTHLGMKPPANAVGLGQTGLFD 355 >gi|118473727|ref|YP_887264.1| Holliday junction DNA helicase RuvB [Mycobacterium smegmatis str. MC2 155] gi|171472979|sp|A0QWH6.1|RUVB_MYCS2 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|118175014|gb|ABK75910.1| holliday junction DNA helicase RuvB [Mycobacterium smegmatis str. MC2 155] Length=351 Score = 622 bits (1604), Expect = 3e-176, Method: Compositional matrix adjust. Identities = 320/343 (94%), Positives = 329/343 (96%), Gaps = 1/343 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 E DR+VSPALTVGEGDID SLRPRSL EFIGQPRVREQLQLV+EGAK RGGTPDHILLS Sbjct 9 EVEDREVSPALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKKRGGTPDHILLS 68 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP Sbjct 69 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 128 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM Sbjct 129 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 188 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 DFYEP ELERVLARSAGILGIELGA+AGAEIARRSRGTPRIANRLLRRVRDFAEVRADG+ Sbjct 189 DFYEPVELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGI 248 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 ITRD+AK+ALEVYDVDELGLDRLDRAVLSALTRSF GGPVGVSTLAVAVGEEA TVEEVC Sbjct 249 ITRDIAKSALEVYDVDELGLDRLDRAVLSALTRSFNGGPVGVSTLAVAVGEEATTVEEVC 308 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPPV-GASQPGLFE 344 EPFLVRAGM+ARTPRGRVAT LAWTHLG+ PPV G Q GLF+ Sbjct 309 EPFLVRAGMIARTPRGRVATPLAWTHLGLQPPVTGIGQAGLFD 351 >gi|145224406|ref|YP_001135084.1| Holliday junction DNA helicase RuvB [Mycobacterium gilvum PYR-GCK] gi|315444738|ref|YP_004077617.1| Holliday junction DNA helicase subunit RuvB [Mycobacterium sp. Spyr1] gi|189046038|sp|A4TBQ5.1|RUVB_MYCGI RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|145216892|gb|ABP46296.1| Holliday junction DNA helicase subunit RuvB [Mycobacterium gilvum PYR-GCK] gi|315263041|gb|ADT99782.1| Holliday junction DNA helicase subunit RuvB [Mycobacterium sp. Spyr1] Length=357 Score = 620 bits (1600), Expect = 8e-176, Method: Compositional matrix adjust. Identities = 320/342 (94%), Positives = 329/342 (97%), Gaps = 3/342 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 +R+V+PALTVGEGDID SLRPRSL EFIGQPRVREQLQLV+EGAKNRGGTPDHILLSGPP Sbjct 16 EREVTPALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKNRGGTPDHILLSGPP 75 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNL+E DVLFIDEIHRIARPAEE Sbjct 76 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLIEGDVLFIDEIHRIARPAEE 135 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY Sbjct 136 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 195 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 EPAELERVLARSAGILGIELGA+AGAEIARRSRGTPRIANRLLRRVRD+AEVRADGVITR Sbjct 196 EPAELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGVITR 255 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 D+AK ALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVCEPF Sbjct 256 DIAKYALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPF 315 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGA---SQPGLFE 344 LVRAGM+ARTPRGRVATA AW HLGMTPP GA Q GLFE Sbjct 316 LVRAGMIARTPRGRVATAQAWKHLGMTPPAGAGGLGQVGLFE 357 >gi|240173174|ref|ZP_04751832.1| Holliday junction DNA helicase RuvB [Mycobacterium kansasii ATCC 12478] Length=347 Score = 619 bits (1595), Expect = 3e-175, Method: Compositional matrix adjust. Identities = 328/347 (95%), Positives = 336/347 (97%), Gaps = 3/347 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 M+E DRDVSPAL VGEGDID SLRPRSLREFIGQPRVREQLQLVIEGA+NRGGTPDHIL Sbjct 1 MSEPGDRDVSPALAVGEGDIDGSLRPRSLREFIGQPRVREQLQLVIEGARNRGGTPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSLAMIIA ELGSSLRVTSGPALERAGDLAAMLSNLV+HDVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLAMIIAGELGSSLRVTSGPALERAGDLAAMLSNLVDHDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLE+APFTLVGATTRSGALTGPLRDRFGFTA Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGALTGPLRDRFGFTA 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEPAELERVLARSAGILGI+LGA+A AEIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMDFYEPAELERVLARSAGILGIQLGAEAAAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE Sbjct 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 VCEPFLVRAGMVARTPRGRVATALAWTHLGM+PP G S QPGLF+ Sbjct 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMSPPAGVSGLGQPGLFD 347 >gi|342858581|ref|ZP_08715236.1| Holliday junction DNA helicase RuvB [Mycobacterium colombiense CECT 3035] gi|342134285|gb|EGT87465.1| Holliday junction DNA helicase RuvB [Mycobacterium colombiense CECT 3035] Length=349 Score = 617 bits (1590), Expect = 1e-174, Method: Compositional matrix adjust. Identities = 318/345 (93%), Positives = 326/345 (95%), Gaps = 3/345 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 + SDR+VS AL GE DIDVSLRPRSLREFIGQPRVREQLQLV+EGAKNRGGTPDHILLS Sbjct 5 DSSDREVSGALASGEADIDVSLRPRSLREFIGQPRVREQLQLVLEGAKNRGGTPDHILLS 64 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTSLAMIIAAELGSSLR+TSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP Sbjct 65 GPPGLGKTSLAMIIAAELGSSLRMTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 124 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM Sbjct 125 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 184 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 DFYEP ELERVLARSAGILGIELG DA EIARRSRGTPRIANRLLRRVRDFAEVRADGV Sbjct 185 DFYEPPELERVLARSAGILGIELGGDAAEEIARRSRGTPRIANRLLRRVRDFAEVRADGV 244 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 ITRDVAK+AL VYDVDELGLDRLDR VLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVC Sbjct 245 ITRDVAKSALAVYDVDELGLDRLDRGVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVC 304 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 EPFLVRAGM+ARTPRGRVATA AWTHLGMTPP G + Q GLF+ Sbjct 305 EPFLVRAGMIARTPRGRVATAKAWTHLGMTPPAGVTGLGQAGLFD 349 >gi|108799234|ref|YP_639431.1| Holliday junction DNA helicase RuvB [Mycobacterium sp. MCS] gi|119868350|ref|YP_938302.1| Holliday junction DNA helicase RuvB [Mycobacterium sp. KMS] gi|126434892|ref|YP_001070583.1| Holliday junction DNA helicase RuvB [Mycobacterium sp. JLS] 6 more sequence titles Length=357 Score = 615 bits (1587), Expect = 2e-174, Method: Compositional matrix adjust. Identities = 319/345 (93%), Positives = 327/345 (95%), Gaps = 3/345 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 E DRDVSPALTVGEGDID SLRPRSL EFIGQPRVREQLQLV+EGAKNRGGTPDHILLS Sbjct 13 EPDDRDVSPALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKNRGGTPDHILLS 72 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTSLAMIIAAEL SSLRVTSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARP Sbjct 73 GPPGLGKTSLAMIIAAELSSSLRVTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARP 132 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM Sbjct 133 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 192 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 DFYEPAELERVLARSAGILGI LG +AGAEIARRSRGTPRIANRLLRRVRD+AEVRADGV Sbjct 193 DFYEPAELERVLARSAGILGIHLGTEAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGV 252 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 ITRD+AKAALEVYDVDELGLDRLDRAVLSAL RSFGGGPVGVSTLAVAVGEE TVEEVC Sbjct 253 ITRDIAKAALEVYDVDELGLDRLDRAVLSALIRSFGGGPVGVSTLAVAVGEEPTTVEEVC 312 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---QPGLFE 344 EPFLVRAGM+ARTPRGRVATA AWTHLG+TPP G + Q GLF+ Sbjct 313 EPFLVRAGMIARTPRGRVATASAWTHLGLTPPSGITGLGQTGLFD 357 >gi|306780630|ref|ZP_07418967.1| holliday junction DNA helicase RuvB [Mycobacterium tuberculosis SUMu002] gi|308326461|gb|EFP15312.1| holliday junction DNA helicase RuvB [Mycobacterium tuberculosis SUMu002] Length=355 Score = 613 bits (1580), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 319/323 (99%), Positives = 320/323 (99%), Gaps = 0/323 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 MTERSDR+VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL Sbjct 1 MTERSDRNVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE Sbjct 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATA 323 VCEPFLVRAGMVART RVATA Sbjct 301 VCEPFLVRAGMVARTRAARVATA 323 >gi|333991018|ref|YP_004523632.1| Holliday junction DNA helicase RuvB [Mycobacterium sp. JDM601] gi|333486986|gb|AEF36378.1| Holliday junction DNA helicase RuvB [Mycobacterium sp. JDM601] Length=358 Score = 608 bits (1567), Expect = 5e-172, Method: Compositional matrix adjust. Identities = 315/348 (91%), Positives = 325/348 (94%), Gaps = 9/348 (2%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 DR+VSPALTVG+GD++ LRPRSL EFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP Sbjct 9 DREVSPALTVGDGDVEAGLRPRSLAEFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 68 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIA ELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE Sbjct 69 GLGKTSLAMIIAGELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 128 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY Sbjct 129 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 188 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 EPAEL+ VLARSA ILGIELG +A AE+ARRSRGTPRIANRLLRRVRD+AEVRADGVITR Sbjct 189 EPAELQLVLARSATILGIELGDEAAAEVARRSRGTPRIANRLLRRVRDYAEVRADGVITR 248 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 DVAKAAL VYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF Sbjct 249 DVAKAALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 308 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGAS---------QPGLFE 344 LVRAGMVARTPRGRVAT AWTHLGM PP GA+ + GLFE Sbjct 309 LVRAGMVARTPRGRVATPAAWTHLGMVPPAGAAGLGIPPGYGEQGLFE 356 >gi|169629966|ref|YP_001703615.1| Holliday junction DNA helicase RuvB [Mycobacterium abscessus ATCC 19977] gi|169241933|emb|CAM62961.1| Holliday junction DNA helicase RuvB [Mycobacterium abscessus] Length=358 Score = 592 bits (1526), Expect = 3e-167, Method: Compositional matrix adjust. Identities = 304/337 (91%), Positives = 318/337 (95%), Gaps = 1/337 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 +S ALTVGE D+D LRP+SLREFIGQPRVREQL+LV+ GAKNRGGTPDHILLSGPPGLG Sbjct 22 MSGALTVGENDVDAGLRPKSLREFIGQPRVREQLELVLSGAKNRGGTPDHILLSGPPGLG 81 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY Sbjct 82 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 141 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVD+VVGKGPGATSIPLEVAPFTLVGATTRSG+LTGPLRDRFGFTAHMDFYEP Sbjct 142 LAMEDFRVDIVVGKGPGATSIPLEVAPFTLVGATTRSGSLTGPLRDRFGFTAHMDFYEPD 201 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 ELE VLARSAGILGIELGADAG EIARRSRGTPRIANRLLRRVRD+AEVRADGVIT DVA Sbjct 202 ELELVLARSAGILGIELGADAGTEIARRSRGTPRIANRLLRRVRDYAEVRADGVITVDVA 261 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 K+AL VYDVDELGLDRLDRAVL ALTRSFGGGPVG+STLAVAVGEE+ TVEEVCEPFLVR Sbjct 262 KSALAVYDVDELGLDRLDRAVLLALTRSFGGGPVGLSTLAVAVGEESTTVEEVCEPFLVR 321 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVG-ASQPGLFE 344 AGM+ARTPRGRVAT LAWTHLG+TPP Q GLF+ Sbjct 322 AGMLARTPRGRVATPLAWTHLGLTPPPQLLGQTGLFD 358 >gi|466823|gb|AAA17098.1| ruvB [Mycobacterium leprae] Length=369 Score = 585 bits (1509), Expect = 2e-165, Method: Compositional matrix adjust. Identities = 303/321 (95%), Positives = 308/321 (96%), Gaps = 3/321 (0%) Query 27 RSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRV 86 RSLREFIGQPRVREQLQLVIEGAKNRG TPDHILLSGPPGLGKTSLAMIIAAELGSSLR+ Sbjct 48 RSLREFIGQPRVREQLQLVIEGAKNRGATPDHILLSGPPGLGKTSLAMIIAAELGSSLRM 107 Query 87 TSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVDVVVGKGPGA 146 TSGPALERAGDLA MLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVDV+VGKGPGA Sbjct 108 TSGPALERAGDLAVMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVDVIVGKGPGA 167 Query 147 TSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPAELERVLARSAGILGIELG 206 TSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP ELE VLAR+AGILGIELG Sbjct 168 TSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPTELEGVLARAAGILGIELG 227 Query 207 ADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAALEVYDVDELGLDRLD 266 +AGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAAL VYDVDELGLDRLD Sbjct 228 VEAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAALAVYDVDELGLDRLD 287 Query 267 RAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVRAGMVARTPRGRVATALAW 326 RAVLSALTRSFGGGPVGVSTLAVAVGEEA TVEEVCEPFLVRAGMVARTPRGRVATA AW Sbjct 288 RAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPFLVRAGMVARTPRGRVATAQAW 347 Query 327 THLGMTPPVGA---SQPGLFE 344 T+L MTPPVG SQPGLFE Sbjct 348 TYLCMTPPVGVTGLSQPGLFE 368 >gi|111023846|ref|YP_706818.1| Holliday junction DNA helicase RuvB [Rhodococcus jostii RHA1] gi|122955048|sp|Q0S1C6.1|RUVB_RHOSR RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|110823376|gb|ABG98660.1| holliday junction DNA helicase [Rhodococcus jostii RHA1] Length=365 Score = 569 bits (1466), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 288/334 (87%), Positives = 311/334 (94%), Gaps = 0/334 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 VS L G+GDI+ SLRP++L +FIGQPRVREQLQLV+ GAK RGGTPDHILLSGPPGLG Sbjct 15 VSADLVAGDGDIEASLRPKNLHDFIGQPRVREQLQLVLTGAKMRGGTPDHILLSGPPGLG 74 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMIIAAELGSSLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEEMLY Sbjct 75 KTSMAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEEMLY 134 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA Sbjct 135 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 194 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+++L RSAGILG++LG +AGAEIA RSRGTPRIANRLLRRVRD+AEVRADGV+TR++A Sbjct 195 ELQQILMRSAGILGVQLGEEAGAEIANRSRGTPRIANRLLRRVRDYAEVRADGVVTREIA 254 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 AAL VYDVD+LGLDRLDR+VLSAL RSFGGGPVGVSTLAVAVGEE ATVEEVCEPFLVR Sbjct 255 HAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEEPATVEEVCEPFLVR 314 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 AGM+ARTPRGRVATA AWT LG+TPP A G+ Sbjct 315 AGMIARTPRGRVATAAAWTQLGLTPPPDAVTGGI 348 >gi|226366282|ref|YP_002784065.1| Holliday junction DNA helicase RuvB [Rhodococcus opacus B4] gi|254767436|sp|C1B4D1.1|RUVB_RHOOB RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|226244772|dbj|BAH55120.1| Holliday junction DNA helicase RuvB [Rhodococcus opacus B4] Length=365 Score = 568 bits (1463), Expect = 6e-160, Method: Compositional matrix adjust. Identities = 288/334 (87%), Positives = 311/334 (94%), Gaps = 0/334 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 VS L G+GDI+ SLRP++L +FIGQPRVREQLQLV+ GAK RGGTPDHILLSGPPGLG Sbjct 15 VSADLVAGDGDIEASLRPKNLHDFIGQPRVREQLQLVLTGAKMRGGTPDHILLSGPPGLG 74 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMIIAAELGSSLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEEMLY Sbjct 75 KTSMAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEEMLY 134 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA Sbjct 135 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 194 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+++L RSAGILG++LG +AGAEIA RSRGTPRIANRLLRRVRD+AEVRADGV+TR++A Sbjct 195 ELKQILMRSAGILGVQLGEEAGAEIASRSRGTPRIANRLLRRVRDYAEVRADGVVTREIA 254 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 AAL VYDVD+LGLDRLDR+VLSAL RSFGGGPVGVSTLAVAVGEE ATVEEVCEPFLVR Sbjct 255 HAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEEPATVEEVCEPFLVR 314 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 AGM+ARTPRGRVATA AWT LG+TPP A G+ Sbjct 315 AGMIARTPRGRVATAAAWTQLGLTPPPDAVTGGI 348 >gi|229491963|ref|ZP_04385780.1| holliday junction DNA helicase RuvB [Rhodococcus erythropolis SK121] gi|229321095|gb|EEN86899.1| holliday junction DNA helicase RuvB [Rhodococcus erythropolis SK121] Length=365 Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust. Identities = 286/334 (86%), Positives = 309/334 (93%), Gaps = 0/334 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 VS L G+GD++ SLRP+SL +FIGQPRVREQLQLV+ GAK RG TPDHIL+SGPPGLG Sbjct 15 VSAELVAGDGDVEASLRPKSLDDFIGQPRVREQLQLVLTGAKLRGSTPDHILMSGPPGLG 74 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMIIA ELGSSLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEEMLY Sbjct 75 KTSMAMIIAGELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEEMLY 134 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP Sbjct 135 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPE 194 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+++L RSAGILG++L DAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG++T DVA Sbjct 195 ELQQILMRSAGILGVDLEVDAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGIVTMDVA 254 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVD+LGLDRLDR+VLSAL RSFGGGPVGVSTLAVAVGEE +TVEEVCEPFLVR Sbjct 255 QAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEEPSTVEEVCEPFLVR 314 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 AGM+ARTPRGRVATA AWT LGMTPP A+ G+ Sbjct 315 AGMIARTPRGRVATAAAWTQLGMTPPPDAAAGGI 348 >gi|226306412|ref|YP_002766372.1| Holliday junction DNA helicase RuvB [Rhodococcus erythropolis PR4] gi|259495675|sp|C0ZZ48.1|RUVB_RHOE4 RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|226185529|dbj|BAH33633.1| Holliday junction DNA helicase RuvB [Rhodococcus erythropolis PR4] Length=365 Score = 566 bits (1458), Expect = 3e-159, Method: Compositional matrix adjust. Identities = 286/337 (85%), Positives = 309/337 (92%), Gaps = 0/337 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 + VS L G+GD++ SLRP+SL +FIGQPRVREQLQLV+ GAK RG TPDHIL+SGPP Sbjct 12 ESQVSAELVAGDGDVEASLRPKSLDDFIGQPRVREQLQLVLTGAKLRGSTPDHILMSGPP 71 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTS+AMIIA ELGSSLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEE Sbjct 72 GLGKTSMAMIIAGELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEE 131 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY Sbjct 132 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 191 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 EP EL+++L RSAGILG+ L DAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG++T Sbjct 192 EPEELQQILMRSAGILGVNLEVDAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGIVTM 251 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 DVA+AAL VYDVD+LGLDRLDR+VLSAL RSFGGGPVGVSTLAVAVGEE +TVEEVCEPF Sbjct 252 DVAQAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEEPSTVEEVCEPF 311 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 LVRAGM+ARTPRGRVATA AWT LGMTPP A+ G+ Sbjct 312 LVRAGMIARTPRGRVATAAAWTQLGMTPPPDAAAGGI 348 >gi|325672615|ref|ZP_08152311.1| crossover junction ATP-dependent DNA helicase RuvB [Rhodococcus equi ATCC 33707] gi|325556492|gb|EGD26158.1| crossover junction ATP-dependent DNA helicase RuvB [Rhodococcus equi ATCC 33707] Length=377 Score = 550 bits (1418), Expect = 9e-155, Method: Compositional matrix adjust. Identities = 278/334 (84%), Positives = 306/334 (92%), Gaps = 0/334 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 V+ +G+++ SLRP++L +FIGQPRVREQLQLV+ GAK RGGTPDH+LLSGPPGLG Sbjct 22 VTANFVSSDGEVEASLRPKNLSDFIGQPRVREQLQLVLTGAKLRGGTPDHVLLSGPPGLG 81 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMIIA ELG+SLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHR+ARPAEEMLY Sbjct 82 KTSMAMIIATELGTSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLY 141 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP Sbjct 142 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPH 201 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+ +L RSAGILGIELG +AGAEIA RSRGTPRIANRLLRRVRD+AEVRADG+ITR++A Sbjct 202 ELQLILLRSAGILGIELGEEAGAEIAGRSRGTPRIANRLLRRVRDYAEVRADGIITREIA 261 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVD+LGLDRLDRAVL AL RSFGGGPVGVSTLAVAVGEE +TVEEVCEPFLVR Sbjct 262 QAALAVYDVDQLGLDRLDRAVLGALVRSFGGGPVGVSTLAVAVGEEPSTVEEVCEPFLVR 321 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 AGM+ARTPRGRVATA AW LG+TPP A+ G+ Sbjct 322 AGMIARTPRGRVATAAAWAQLGLTPPPDAAVGGI 355 >gi|312139495|ref|YP_004006831.1| holliday junction DNA helicase ruvb [Rhodococcus equi 103S] gi|311888834|emb|CBH48146.1| Holliday junction DNA helicase RuvB [Rhodococcus equi 103S] Length=371 Score = 548 bits (1413), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 278/334 (84%), Positives = 305/334 (92%), Gaps = 0/334 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 V+ +G+++ SLRP++L +FIGQPRVREQLQLV+ GAK RGGTPDH+LLSGPPGLG Sbjct 16 VTANFVSSDGEVEASLRPKNLSDFIGQPRVREQLQLVLTGAKLRGGTPDHVLLSGPPGLG 75 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMIIA ELG+SLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHR+ARPAEEMLY Sbjct 76 KTSMAMIIATELGTSLRLTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLY 135 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP Sbjct 136 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPH 195 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+ +L RSAGILGIELG +AGAEIA RSRGTPRIANRLLRRVRD+AEVRADG+ITR++A Sbjct 196 ELQLILLRSAGILGIELGEEAGAEIAGRSRGTPRIANRLLRRVRDYAEVRADGIITREIA 255 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVD LGLDRLDRAVL AL RSFGGGPVGVSTLAVAVGEE +TVEEVCEPFLVR Sbjct 256 QAALAVYDVDPLGLDRLDRAVLGALVRSFGGGPVGVSTLAVAVGEEPSTVEEVCEPFLVR 315 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 AGM+ARTPRGRVATA AW LG+TPP A+ G+ Sbjct 316 AGMIARTPRGRVATAAAWAQLGLTPPPDAAVGGI 349 >gi|343924326|ref|ZP_08763877.1| Holliday junction ATP-dependent DNA helicase RuvB [Gordonia alkanivorans NBRC 16433] gi|343765760|dbj|GAA10803.1| Holliday junction ATP-dependent DNA helicase RuvB [Gordonia alkanivorans NBRC 16433] Length=362 Score = 548 bits (1412), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 280/332 (85%), Positives = 303/332 (92%), Gaps = 0/332 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 DR+V+ +GD+D LRPRSL +FIGQPRV EQL+LV+ GAK RGGTPDHILLSGPP Sbjct 10 DREVNATPVRSDGDLDAGLRPRSLADFIGQPRVCEQLELVLHGAKGRGGTPDHILLSGPP 69 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIA+E+G+++RVTSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEE Sbjct 70 GLGKTSLAMIIASEMGAAIRVTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEE 129 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPL+VAPFTLVGATTRSG+LTGPLRDRFGFTAHM+FY Sbjct 130 MLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDRFGFTAHMEFY 189 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 +PAEL RVL RSAGILG+EL DA EIARRSRGTPRIANRLLRRVRD+AEVR DG IT Sbjct 190 DPAELVRVLNRSAGILGMELRPDASEEIARRSRGTPRIANRLLRRVRDYAEVRGDGSITV 249 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 DVA+AAL+VYDVDELG DRLDRAVL AL R+FGGGPVGVSTLAVAVGEE ATVEEVCEPF Sbjct 250 DVARAALKVYDVDELGFDRLDRAVLDALIRAFGGGPVGVSTLAVAVGEEPATVEEVCEPF 309 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGA 337 LVRAGM+ARTPRGRVATA AW HLG+TPP GA Sbjct 310 LVRAGMIARTPRGRVATAAAWHHLGLTPPAGA 341 >gi|262202232|ref|YP_003273440.1| Holliday junction DNA helicase RuvB [Gordonia bronchialis DSM 43247] gi|262085579|gb|ACY21547.1| Holliday junction DNA helicase RuvB [Gordonia bronchialis DSM 43247] Length=363 Score = 544 bits (1402), Expect = 6e-153, Method: Compositional matrix adjust. Identities = 280/332 (85%), Positives = 299/332 (91%), Gaps = 0/332 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 DR+VS +GD+D LRPRSL EFIGQPRV EQL+LV+ GAK RGGTPDHILLSGPP Sbjct 11 DREVSALPVRSDGDLDAGLRPRSLAEFIGQPRVCEQLELVLHGAKGRGGTPDHILLSGPP 70 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIAAE+G+++RVTSGPALERAGDLAAMLSNLVE DVLFIDEIHRIARPAEE Sbjct 71 GLGKTSLAMIIAAEMGAAIRVTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIARPAEE 130 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPL+VAPFTLVGATTRSG+LTGPLRDRFGFTAHM+FY Sbjct 131 MLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDRFGFTAHMEFY 190 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 + EL VL RSAGILGI LG DA +EIA RSRGTPRIANRLLRRVRD+AEVR DG IT Sbjct 191 DTTELVHVLRRSAGILGIVLGDDAASEIASRSRGTPRIANRLLRRVRDYAEVRGDGTITV 250 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 D A+AAL VYDVDELG DRLDRAVL+AL R+FGGGPVGVSTLAVAVGEE ATVEEVCEPF Sbjct 251 DTARAALAVYDVDELGFDRLDRAVLNALIRAFGGGPVGVSTLAVAVGEEPATVEEVCEPF 310 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGA 337 LVRAGMVARTPRGRVATA AW HLG+TPP GA Sbjct 311 LVRAGMVARTPRGRVATAAAWHHLGLTPPAGA 342 >gi|54025665|ref|YP_119907.1| Holliday junction DNA helicase RuvB [Nocardia farcinica IFM 10152] gi|68715295|sp|Q5YTE8.1|RUVB_NOCFA RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|54017173|dbj|BAD58543.1| putative Holliday junction DNA helicase A subunit [Nocardia farcinica IFM 10152] Length=357 Score = 539 bits (1388), Expect = 3e-151, Method: Compositional matrix adjust. Identities = 273/334 (82%), Positives = 297/334 (89%), Gaps = 0/334 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 M + D VSP+ +G+I+ SLRP+SL +FIGQPRVREQL LV+ GAK RG TPDH+L Sbjct 1 MDDHDDSPVSPSFLKSDGEIEASLRPKSLDDFIGQPRVREQLALVLRGAKQRGSTPDHVL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTS+AMIIAAELG++LR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSMAMIIAAELGTALRITSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPL++APFTLVGATTRSGALTGPLRDRFGFT Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALTGPLRDRFGFTG 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HMDFYEP EL R+L RSA ILG+ + DA AEIA RSRGTPRIANRLLRRVRD+AEVRAD Sbjct 181 HMDFYEPGELLRILERSAQILGVRIETDAAAEIAGRSRGTPRIANRLLRRVRDYAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 G++T VA+AALEVYDVD LGLDRLDRAVL AL R F GGPVGVSTLAVAVGEEA TVEE Sbjct 241 GIVTLPVARAALEVYDVDTLGLDRLDRAVLDALVRGFHGGPVGVSTLAVAVGEEATTVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPP 334 VCEPFLVRAG+VARTPRGRVATA AW HLG+ PP Sbjct 301 VCEPFLVRAGLVARTPRGRVATAAAWEHLGLVPP 334 >gi|339299088|gb|AEJ51198.1| holliday junction DNA helicase ruvB [Mycobacterium tuberculosis CCDC5180] Length=278 Score = 537 bits (1384), Expect = 8e-151, Method: Compositional matrix adjust. Identities = 277/278 (99%), Positives = 278/278 (100%), Gaps = 0/278 (0%) Query 67 LGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEM 126 +GKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEM Sbjct 1 MGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEM 60 Query 127 LYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYE 186 LYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYE Sbjct 61 LYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYE 120 Query 187 PAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRD 246 PAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRD Sbjct 121 PAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRD 180 Query 247 VAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFL 306 VAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFL Sbjct 181 VAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFL 240 Query 307 VRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 VRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE Sbjct 241 VRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 278 >gi|333919484|ref|YP_004493065.1| Holliday junction ATP-dependent DNA helicase ruvB [Amycolicicoccus subflavus DQS3-9A1] gi|333481705|gb|AEF40265.1| Holliday junction ATP-dependent DNA helicase ruvB [Amycolicicoccus subflavus DQS3-9A1] Length=362 Score = 537 bits (1383), Expect = 1e-150, Method: Compositional matrix adjust. Identities = 270/337 (81%), Positives = 297/337 (89%), Gaps = 0/337 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 D +S L G+ D++ SLRP+SLR+F GQP+VREQL LV+ GAK RG PDHILLSGPP Sbjct 9 DIPMSSQLVEGDNDVEGSLRPKSLRDFTGQPKVREQLDLVLSGAKQRGSAPDHILLSGPP 68 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMIIA ELG+SLR+TSGPALER GDLAAMLSNLVE DVLFIDEIHRI+RPAEE Sbjct 69 GLGKTSLAMIIAGELGTSLRLTSGPALERPGDLAAMLSNLVEGDVLFIDEIHRISRPAEE 128 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGATSIPLE+APFTLVGATTRSGALTGPLRDRFGFT HMDFY Sbjct 129 MLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGALTGPLRDRFGFTGHMDFY 188 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 EP EL+ +LARSA ILG+ L DAGAEIARRSRGTPRIANRLLRRVRD+AEVRADGV++ Sbjct 189 EPWELQSILARSARILGVSLQDDAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGVVSL 248 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 D+A+AAL VYDVD+LGLDRLDRAVL AL RSF GGPVG +TLAVAVGEE ATVEEVCEP+ Sbjct 249 DIARAALAVYDVDDLGLDRLDRAVLQALVRSFNGGPVGAATLAVAVGEEPATVEEVCEPY 308 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 LVRAGM+ARTPRGRVAT AW HLG+ PP + G+ Sbjct 309 LVRAGMLARTPRGRVATVTAWEHLGLVPPADTAIAGI 345 >gi|296139645|ref|YP_003646888.1| Holliday junction DNA helicase RuvB [Tsukamurella paurometabola DSM 20162] gi|296027779|gb|ADG78549.1| Holliday junction DNA helicase RuvB [Tsukamurella paurometabola DSM 20162] Length=364 Score = 533 bits (1374), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 272/325 (84%), Positives = 295/325 (91%), Gaps = 0/325 (0%) Query 18 GDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMIIA 77 GD SLRP+SL EFIGQP+VREQLQLV+ GA+ RGGTPDHILLSGPPGLGKTSLAMIIA Sbjct 27 GDDSDSLRPKSLDEFIGQPKVREQLQLVLHGARKRGGTPDHILLSGPPGLGKTSLAMIIA 86 Query 78 AELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVD 137 AELG++LRVTSGPALERAGDLAAMLSNLVE DVLFIDEIHR+ARPAEEMLYLAMEDFRVD Sbjct 87 AELGTALRVTSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLYLAMEDFRVD 146 Query 138 VVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPAELERVLARS 197 VVVGKGPGATSIPL+VAPFTLVGATTRSG+LTGPLRDRFGFTAHMDFY+ A+L +V+ RS Sbjct 147 VVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDRFGFTAHMDFYDTADLIQVIERS 206 Query 198 AGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAALEVYDV 257 A ILGIE+ +A AEI RSRGTPRIANRLLRRVRDFA+VRADG++T DVA+ AL+VYDV Sbjct 207 AKILGIEIVREAAAEIGSRSRGTPRIANRLLRRVRDFADVRADGIVTVDVARGALKVYDV 266 Query 258 DELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVRAGMVARTPR 317 DELGLDRLDRAVL AL RSFGGGPVGVSTLAVAVGEE TVEEVCEPFLVRAGM+ARTPR Sbjct 267 DELGLDRLDRAVLGALIRSFGGGPVGVSTLAVAVGEEPGTVEEVCEPFLVRAGMLARTPR 326 Query 318 GRVATALAWTHLGMTPPVGASQPGL 342 GRVAT AW HLG+ PP GA G+ Sbjct 327 GRVATMAAWHHLGLEPPAGALASGI 351 >gi|325001438|ref|ZP_08122550.1| Holliday junction DNA helicase RuvB [Pseudonocardia sp. P1] Length=360 Score = 530 bits (1364), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 271/331 (82%), Positives = 296/331 (90%), Gaps = 0/331 (0%) Query 7 RDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPG 66 R++ GE D++ SLRPRSL EF+GQPRVREQL+LV+EGA+ RG PDHILLSGPPG Sbjct 20 REIDAVAQPGEADVEASLRPRSLDEFVGQPRVREQLELVLEGARRRGDPPDHILLSGPPG 79 Query 67 LGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEM 126 LGKTSLAMI+A ELG+S+R+TSGPALERAGDLAAMLSNLV DVLFIDEIHR ARPAEEM Sbjct 80 LGKTSLAMIVAQELGASIRLTSGPALERAGDLAAMLSNLVPGDVLFIDEIHRTARPAEEM 139 Query 127 LYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYE 186 LYLAMEDFRVDVVVGKGPGATSIPL+VAPFTLVGATTR+G+LTGPLRDRFGFT HM+FYE Sbjct 140 LYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRAGSLTGPLRDRFGFTGHMEFYE 199 Query 187 PAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRD 246 ELE VL R+AGILGI+L AD EIA R RGTPR+ANRLLRRVRDFAEVRADGVI R+ Sbjct 200 VLELEHVLHRAAGILGIDLRADGAEEIAGRCRGTPRVANRLLRRVRDFAEVRADGVIHRE 259 Query 247 VAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFL 306 VA+AAL VYDVDELGLDRLDRAVLSAL RSF GGPVGVSTLAVAVGE+A TVEEVCEP+L Sbjct 260 VARAALAVYDVDELGLDRLDRAVLSALVRSFHGGPVGVSTLAVAVGEDAGTVEEVCEPYL 319 Query 307 VRAGMVARTPRGRVATALAWTHLGMTPPVGA 337 VRAGM+ARTPRGRVAT LAWTHLG+TPP A Sbjct 320 VRAGMLARTPRGRVATPLAWTHLGLTPPADA 350 >gi|134098597|ref|YP_001104258.1| Holliday junction DNA helicase RuvB [Saccharopolyspora erythraea NRRL 2338] gi|172044126|sp|A4FBA8.1|RUVB_SACEN RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|133911220|emb|CAM01333.1| Holliday junction DNA helicase RuvB [Saccharopolyspora erythraea NRRL 2338] Length=353 Score = 526 bits (1356), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 266/329 (81%), Positives = 290/329 (89%), Gaps = 0/329 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 ++P E D++ +LRPR L EF+GQ RVREQL+LV+ GA NRG PDH+L SGPPGLG Sbjct 12 LAPQQETAEQDVETTLRPRRLSEFVGQARVREQLELVLHGALNRGDQPDHVLFSGPPGLG 71 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTSLAMIIAAELG+S+RVTSGPALER GDLAAMLSNL E DVLFIDEIHRIARPAEEMLY Sbjct 72 KTSLAMIIAAELGASIRVTSGPALERPGDLAAMLSNLAEGDVLFIDEIHRIARPAEEMLY 131 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMED+RVD+VVGKGPGATSIPLE+APFTLVGATTRSGALTGPLRDRFGFTAHM+FYEPA Sbjct 132 LAMEDYRVDIVVGKGPGATSIPLEIAPFTLVGATTRSGALTGPLRDRFGFTAHMEFYEPA 191 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 ELE V+ RSAGILG++L + EIARRSRGTPRIANRLLRRVRDFAEVRADG +T DVA Sbjct 192 ELELVVRRSAGILGVDLRDEGAVEIARRSRGTPRIANRLLRRVRDFAEVRADGAVTLDVA 251 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AALEVYDVDE GLDRLDRAVL AL RSF GGPVGVSTLAVAVGEE TVEEVCEP+LVR Sbjct 252 RAALEVYDVDEHGLDRLDRAVLGALVRSFNGGPVGVSTLAVAVGEEPTTVEEVCEPYLVR 311 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGA 337 AGM+ARTPRGRVAT AW HLG+ PP A Sbjct 312 AGMLARTPRGRVATVAAWQHLGLVPPQHA 340 >gi|291008206|ref|ZP_06566179.1| Holliday junction DNA helicase RuvB [Saccharopolyspora erythraea NRRL 2338] Length=363 Score = 526 bits (1356), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 266/329 (81%), Positives = 290/329 (89%), Gaps = 0/329 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 ++P E D++ +LRPR L EF+GQ RVREQL+LV+ GA NRG PDH+L SGPPGLG Sbjct 22 LAPQQETAEQDVETTLRPRRLSEFVGQARVREQLELVLHGALNRGDQPDHVLFSGPPGLG 81 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTSLAMIIAAELG+S+RVTSGPALER GDLAAMLSNL E DVLFIDEIHRIARPAEEMLY Sbjct 82 KTSLAMIIAAELGASIRVTSGPALERPGDLAAMLSNLAEGDVLFIDEIHRIARPAEEMLY 141 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMED+RVD+VVGKGPGATSIPLE+APFTLVGATTRSGALTGPLRDRFGFTAHM+FYEPA Sbjct 142 LAMEDYRVDIVVGKGPGATSIPLEIAPFTLVGATTRSGALTGPLRDRFGFTAHMEFYEPA 201 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 ELE V+ RSAGILG++L + EIARRSRGTPRIANRLLRRVRDFAEVRADG +T DVA Sbjct 202 ELELVVRRSAGILGVDLRDEGAVEIARRSRGTPRIANRLLRRVRDFAEVRADGAVTLDVA 261 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AALEVYDVDE GLDRLDRAVL AL RSF GGPVGVSTLAVAVGEE TVEEVCEP+LVR Sbjct 262 RAALEVYDVDEHGLDRLDRAVLGALVRSFNGGPVGVSTLAVAVGEEPTTVEEVCEPYLVR 321 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGA 337 AGM+ARTPRGRVAT AW HLG+ PP A Sbjct 322 AGMLARTPRGRVATVAAWQHLGLVPPQHA 350 >gi|331697369|ref|YP_004333608.1| Holliday junction ATP-dependent DNA helicase ruvB [Pseudonocardia dioxanivorans CB1190] gi|326952058|gb|AEA25755.1| Holliday junction ATP-dependent DNA helicase ruvB [Pseudonocardia dioxanivorans CB1190] Length=346 Score = 525 bits (1353), Expect = 3e-147, Method: Compositional matrix adjust. Identities = 269/334 (81%), Positives = 299/334 (90%), Gaps = 0/334 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 M+E + RDV + + D++ +LRPR L EFIGQPRVREQL+LV+EGA+ RG PDHIL Sbjct 1 MSEENLRDVGGEVLEEDLDVEGTLRPRRLSEFIGQPRVREQLELVLEGARRRGTPPDHIL 60 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKTSL+MI+AAELG+++R+TSGPALERAGDLAAMLSNL+ DVLFIDEIHRIA Sbjct 61 LSGPPGLGKTSLSMIVAAELGAAIRLTSGPALERAGDLAAMLSNLMPGDVLFIDEIHRIA 120 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPL++APFTLVGATTR+GALTGPLRDRFGFT Sbjct 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRAGALTGPLRDRFGFTG 180 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 HM+FYEPAELE VL R+A IL ++L D AEIARRSRGTPRIANRLLRRVRDFAEVRAD Sbjct 181 HMEFYEPAELELVLRRAAAILEVDLRPDGAAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 G +T DVA+ AL VYDVDELGLDRLDRAVLSAL +SFGGGPVGVSTLAVAVGEE TVEE Sbjct 241 GAVTLDVAREALAVYDVDELGLDRLDRAVLSALVKSFGGGPVGVSTLAVAVGEEPGTVEE 300 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPP 334 VCEP+LVRAGM+ARTPRGRVATA AW HLG+TPP Sbjct 301 VCEPYLVRAGMLARTPRGRVATAAAWGHLGVTPP 334 >gi|256375825|ref|YP_003099485.1| Holliday junction DNA helicase RuvB [Actinosynnema mirum DSM 43827] gi|255920128|gb|ACU35639.1| Holliday junction DNA helicase RuvB [Actinosynnema mirum DSM 43827] Length=368 Score = 523 bits (1347), Expect = 1e-146, Method: Compositional matrix adjust. Identities = 268/336 (80%), Positives = 297/336 (89%), Gaps = 2/336 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 ++P GE D++ +LRP+ LREF+GQP+VREQL+LV+ GA RG PDH+LLSGPPGLG Sbjct 34 LNPVREPGERDLETTLRPKDLREFVGQPKVREQLELVLHGAMRRGAPPDHVLLSGPPGLG 93 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTSLAMIIAAELG+SLR+TSGPALERAGDLAAMLSNLVE DVLFIDEIHR+ARPAEEMLY Sbjct 94 KTSLAMIIAAELGASLRITSGPALERAGDLAAMLSNLVEGDVLFIDEIHRMARPAEEMLY 153 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPL++APFTLVGATTRSGALTGPLRDRFGFT HM+FY P Sbjct 154 LAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALTGPLRDRFGFTGHMEFYTPE 213 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL+ ++ RSA ILG++L + EIA RSRGTPRIANRLLRRVRDFAEVRADG +T +VA Sbjct 214 ELDLIVRRSAVILGVDLREEGAVEIAGRSRGTPRIANRLLRRVRDFAEVRADGAVTLEVA 273 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVDELGLDRLDRAVL AL RSFGGGPVGVSTLAVAVGEE TVEEVCEP+LVR Sbjct 274 RAALAVYDVDELGLDRLDRAVLGALVRSFGGGPVGVSTLAVAVGEEPTTVEEVCEPYLVR 333 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGLFE 344 AGM+ARTPRGRVATALAW HLG+ PP A PGL E Sbjct 334 AGMLARTPRGRVATALAWQHLGLEPPDHA--PGLLE 367 >gi|257055538|ref|YP_003133370.1| Holliday junction DNA helicase subunit RuvB [Saccharomonospora viridis DSM 43017] gi|256585410|gb|ACU96543.1| Holliday junction DNA helicase subunit RuvB [Saccharomonospora viridis DSM 43017] Length=374 Score = 520 bits (1338), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 267/346 (78%), Positives = 296/346 (86%), Gaps = 5/346 (1%) Query 4 RSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSG 63 R + +S GE +++ +LRPR+L F+GQPRVREQLQLV+E A+ RG PDH+LLSG Sbjct 29 RDEAPLSAVAHTGEREVETTLRPRTLDSFVGQPRVREQLQLVLESARKRGVPPDHVLLSG 88 Query 64 PPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPA 123 PPGLGKTSLAMIIAAEL +S+R+TSGPALE+AGDLAAMLSNL E DVLFIDEIHRIARPA Sbjct 89 PPGLGKTSLAMIIAAELDTSIRITSGPALEKAGDLAAMLSNLAEGDVLFIDEIHRIARPA 148 Query 124 EEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMD 183 EEMLYLAMEDFRVDVVVGKGPGATSIPLE+ PFTLVGATTRSGALTGPLRDRFGFT M+ Sbjct 149 EEMLYLAMEDFRVDVVVGKGPGATSIPLEIPPFTLVGATTRSGALTGPLRDRFGFTGQME 208 Query 184 FYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVI 243 FY P ELE+VL RSA ILGI + + AEIARRSRGTPRIANRLLRRVRD+AEVRADGV Sbjct 209 FYTPEELEQVLKRSASILGIAIDDEGRAEIARRSRGTPRIANRLLRRVRDYAEVRADGVA 268 Query 244 TRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCE 303 T V +AAL+VYDVDELGLDRLDRAVL AL RSF GGPVGVSTLAVAVGEE TVEEVCE Sbjct 269 TLPVVRAALQVYDVDELGLDRLDRAVLDALVRSFNGGPVGVSTLAVAVGEEPTTVEEVCE 328 Query 304 PFLVRAGMVARTPRGRVATALAWTHLGMTPP-----VGASQPGLFE 344 P+LVRAGM+ARTPRGRVATALAW HLG+ PP + A+ P LF+ Sbjct 329 PYLVRAGMLARTPRGRVATALAWEHLGLQPPPEVGRLDAATPSLFD 374 >gi|302527850|ref|ZP_07280192.1| Holliday junction DNA helicase RuvB [Streptomyces sp. AA4] gi|302436745|gb|EFL08561.1| Holliday junction DNA helicase RuvB [Streptomyces sp. AA4] Length=358 Score = 516 bits (1330), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 264/338 (79%), Positives = 294/338 (87%), Gaps = 0/338 (0%) Query 3 ERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLS 62 E D +S GE D++ SLRPR L EF+GQ RVREQL+LV+E A+ R PDH+LLS Sbjct 10 EAGDETLSALAQTGERDLETSLRPRKLDEFVGQERVREQLELVLESARRRDVPPDHVLLS 69 Query 63 GPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARP 122 GPPGLGKTS+AMI+AAELG+++R+TSGPALERAGDLAAMLSNL DVLFIDEIHRIARP Sbjct 70 GPPGLGKTSMAMIVAAELGAAIRITSGPALERAGDLAAMLSNLAPGDVLFIDEIHRIARP 129 Query 123 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHM 182 AEEMLYLAMEDFRVDVVVGKGPGATSIPLE+APFTLVGATTRSG+LTGPLRDRFGFT M Sbjct 130 AEEMLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLTGPLRDRFGFTGQM 189 Query 183 DFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGV 242 +FY AELE V+ R+A ILGIE+ D AEIA RSRGTPRIANRLLRRVRD+AEVRADG Sbjct 190 EFYSAAELELVVRRAATILGIEIDRDGCAEIAGRSRGTPRIANRLLRRVRDYAEVRADGK 249 Query 243 ITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVC 302 +T +VA+AAL+VYDVDELGLDRLDRAVL ALTRSFGGGPVG+STLAVAVGEEA TVEEVC Sbjct 250 VTLEVAQAALKVYDVDELGLDRLDRAVLGALTRSFGGGPVGISTLAVAVGEEATTVEEVC 309 Query 303 EPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQP 340 EP+LVRAGM+ARTPRGRVATA AW HLG+ PP A +P Sbjct 310 EPYLVRAGMLARTPRGRVATAAAWHHLGLVPPPEAGRP 347 >gi|300787172|ref|YP_003767463.1| holliday junction DNA helicase RuvB [Amycolatopsis mediterranei U32] gi|299796686|gb|ADJ47061.1| holliday junction DNA helicase RuvB [Amycolatopsis mediterranei U32] Length=350 Score = 514 bits (1325), Expect = 6e-144, Method: Compositional matrix adjust. Identities = 263/333 (79%), Positives = 294/333 (89%), Gaps = 2/333 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 +S + GE +++ +LRPR L EF+GQPRVREQL+LV+E A+ RG PDH+LLSGPPGLG Sbjct 7 LSAWVQTGEENVEGTLRPRKLDEFVGQPRVREQLELVLESARRRGVPPDHVLLSGPPGLG 66 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMI+AAELG+++R+TSGPALERAGDLAAMLSNL DVLFIDEIHRIARPAEEMLY Sbjct 67 KTSMAMIVAAELGAAIRITSGPALERAGDLAAMLSNLAPGDVLFIDEIHRIARPAEEMLY 126 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLE+APFTLVGATTRSG+LTGPLRDRFGFT M+FY A Sbjct 127 LAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLTGPLRDRFGFTGQMEFYTDA 186 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 ELE V+ R+A IL I + D AEIA RSRGTPRIANRLLRRVRD+AEVRADG +TRDVA Sbjct 187 ELELVVRRAATILDIPIDRDGCAEIAGRSRGTPRIANRLLRRVRDYAEVRADGKVTRDVA 246 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVDELGLDRLDRAVL+ALTRSFGGGPVG+STLAVAVGEEA TVEEVCEP+LVR Sbjct 247 RAALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGISTLAVAVGEEATTVEEVCEPYLVR 306 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPG 341 AGM+ARTPRGRVATA AW HLG+ PP A PG Sbjct 307 AGMLARTPRGRVATATAWEHLGLVPP--ADLPG 337 >gi|340528671|gb|AEK43876.1| holliday junction DNA helicase RuvB [Amycolatopsis mediterranei S699] Length=355 Score = 514 bits (1323), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 263/333 (79%), Positives = 294/333 (89%), Gaps = 2/333 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 +S + GE +++ +LRPR L EF+GQPRVREQL+LV+E A+ RG PDH+LLSGPPGLG Sbjct 12 LSAWVQTGEENVEGTLRPRKLDEFVGQPRVREQLELVLESARRRGVPPDHVLLSGPPGLG 71 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTS+AMI+AAELG+++R+TSGPALERAGDLAAMLSNL DVLFIDEIHRIARPAEEMLY Sbjct 72 KTSMAMIVAAELGAAIRITSGPALERAGDLAAMLSNLAPGDVLFIDEIHRIARPAEEMLY 131 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDVVVGKGPGATSIPLE+APFTLVGATTRSG+LTGPLRDRFGFT M+FY A Sbjct 132 LAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLTGPLRDRFGFTGQMEFYTDA 191 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 ELE V+ R+A IL I + D AEIA RSRGTPRIANRLLRRVRD+AEVRADG +TRDVA Sbjct 192 ELELVVRRAATILDIPIDRDGCAEIAGRSRGTPRIANRLLRRVRDYAEVRADGKVTRDVA 251 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVDELGLDRLDRAVL+ALTRSFGGGPVG+STLAVAVGEEA TVEEVCEP+LVR Sbjct 252 RAALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGISTLAVAVGEEATTVEEVCEPYLVR 311 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPG 341 AGM+ARTPRGRVATA AW HLG+ PP A PG Sbjct 312 AGMLARTPRGRVATATAWEHLGLVPP--ADLPG 342 >gi|68536131|ref|YP_250836.1| Holliday junction DNA helicase B [Corynebacterium jeikeium K411] gi|260578826|ref|ZP_05846733.1| Holliday junction DNA helicase RuvB [Corynebacterium jeikeium ATCC 43734] gi|97190006|sp|Q4JVD9.1|RUVB_CORJK RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB gi|68263730|emb|CAI37218.1| holliday junction DNA helicase [Corynebacterium jeikeium K411] gi|258603124|gb|EEW16394.1| Holliday junction DNA helicase RuvB [Corynebacterium jeikeium ATCC 43734] Length=354 Score = 510 bits (1313), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 251/332 (76%), Positives = 294/332 (89%), Gaps = 0/332 (0%) Query 5 SDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGP 64 + D++P T G+ DID SLRP+SL EFIGQP+VR QL LV+ GA++RG PDH+LL+GP Sbjct 19 QNEDLNPQQTAGDSDIDTSLRPKSLDEFIGQPKVRTQLDLVLGGARSRGVAPDHVLLAGP 78 Query 65 PGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAE 124 PGLGKT++AMIIA ELGSSLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHR+ARPAE Sbjct 79 PGLGKTTMAMIIAQELGSSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRMARPAE 138 Query 125 EMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDF 184 EMLY+AMEDFR+DV+VGKGPGATSIP+E+APFTLVGATTR+G LTGPLRDRFGFTA M+F Sbjct 139 EMLYMAMEDFRIDVIVGKGPGATSIPIEIAPFTLVGATTRAGMLTGPLRDRFGFTAQMEF 198 Query 185 YEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVIT 244 Y+ A+L RV+ R+AGILG+++ DA AEIA RSRGTPRIANRLLRRVRDFA+V ADG IT Sbjct 199 YDTADLTRVVTRAAGILGVDITGDAAAEIASRSRGTPRIANRLLRRVRDFADVNADGKIT 258 Query 245 RDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEP 304 +VA+AAL V+DVDE GLDRLDRAV+ AL + GGGPVGV+TLA+AVGEE +TVEEVCEP Sbjct 259 VEVARAALLVFDVDESGLDRLDRAVIEALVKGHGGGPVGVNTLALAVGEEPSTVEEVCEP 318 Query 305 FLVRAGMVARTPRGRVATALAWTHLGMTPPVG 336 +LVRAGMV+RTPRGRVATA AW H+G+ PP G Sbjct 319 YLVRAGMVSRTPRGRVATAAAWRHIGLEPPEG 350 >gi|258653555|ref|YP_003202711.1| Holliday junction DNA helicase RuvB [Nakamurella multipartita DSM 44233] gi|258556780|gb|ACV79722.1| Holliday junction DNA helicase RuvB [Nakamurella multipartita DSM 44233] Length=370 Score = 509 bits (1311), Expect = 3e-142, Method: Compositional matrix adjust. Identities = 258/323 (80%), Positives = 288/323 (90%), Gaps = 0/323 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 V+P G+ D++ SLRPRS+ EF+GQ +VREQLQLV+ GAK RG PDH+LL+GPPGLG Sbjct 26 VTPGQVPGDSDVEASLRPRSMDEFVGQEKVREQLQLVLAGAKLRGTPPDHVLLAGPPGLG 85 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KTSL+MIIAAELG++LR+TSGPALERAGDLAA+LSNLVE DVLFIDEIHRIARPAEEMLY Sbjct 86 KTSLSMIIAAELGAALRLTSGPALERAGDLAAILSNLVEGDVLFIDEIHRIARPAEEMLY 145 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 LAMEDFRVDV+VGKGPGATSIPL++APFTLVGATTRSG LTGPLRDRFGFTAHM+FY Sbjct 146 LAMEDFRVDVMVGKGPGATSIPLDIAPFTLVGATTRSGQLTGPLRDRFGFTAHMEFYSAD 205 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 EL V++RSA ILGIEL D AEIARRSRGTPRIANRLLRRVRD+A+VRADG IT DVA Sbjct 206 ELTIVISRSAAILGIELRPDGAAEIARRSRGTPRIANRLLRRVRDYAQVRADGAITLDVA 265 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 +AAL VYDVDE+GLDRLDRAVLS L RSFGGGPVG++TLAVAVGEE +TVEEVCEPFLVR Sbjct 266 RAALAVYDVDEMGLDRLDRAVLSVLCRSFGGGPVGLTTLAVAVGEEPSTVEEVCEPFLVR 325 Query 309 AGMVARTPRGRVATALAWTHLGM 331 GM+ART RGRVAT AW HLG+ Sbjct 326 IGMLARTARGRVATPAAWDHLGL 348 >gi|326382128|ref|ZP_08203820.1| Holliday junction DNA helicase RuvB [Gordonia neofelifaecis NRRL B-59395] gi|326198858|gb|EGD56040.1| Holliday junction DNA helicase RuvB [Gordonia neofelifaecis NRRL B-59395] Length=364 Score = 507 bits (1305), Expect = 1e-141, Method: Compositional matrix adjust. Identities = 264/322 (82%), Positives = 287/322 (90%), Gaps = 0/322 (0%) Query 16 GEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLGKTSLAMI 75 G+ D+D SLRP L FIGQPRVREQL+LV+ A+ RG TPDHILLSGPPGLGKTSLAMI Sbjct 24 GDRDLDASLRPSDLGSFIGQPRVREQLELVLHAARARGRTPDHILLSGPPGLGKTSLAMI 83 Query 76 IAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFR 135 IAAE+G+++R+TSGPALERAGDLAAMLSNLV+ DVLFIDEIHRIARPAEEMLYLAMEDFR Sbjct 84 IAAEMGAAIRITSGPALERAGDLAAMLSNLVDGDVLFIDEIHRIARPAEEMLYLAMEDFR 143 Query 136 VDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPAELERVLA 195 VDVVVGKGPGATSIPL+VAPFTLVGATTRSGALTGPLRDRFGFTAHM+FYE EL RV+ Sbjct 144 VDVVVGKGPGATSIPLDVAPFTLVGATTRSGALTGPLRDRFGFTAHMEFYETGELVRVIK 203 Query 196 RSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAALEVY 255 RSA ILGI + DA +E+A RSRGTPRIANRLLRRVRD+AEVR DG + A+AAL VY Sbjct 204 RSATILGIAIDDDAASEVAGRSRGTPRIANRLLRRVRDYAEVRGDGRVDLAAARAALAVY 263 Query 256 DVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVRAGMVART 315 DVDELGLDRLDRAVL AL R FGGGPVGVSTLAVAVGEE ATVEEVCEPFLVRAGM+ART Sbjct 264 DVDELGLDRLDRAVLGALVRGFGGGPVGVSTLAVAVGEEPATVEEVCEPFLVRAGMIART 323 Query 316 PRGRVATALAWTHLGMTPPVGA 337 PRGR+ATA AW HLG+TPP GA Sbjct 324 PRGRLATASAWHHLGLTPPEGA 345 >gi|311739556|ref|ZP_07713391.1| crossover junction ATP-dependent DNA helicase RuvB [Corynebacterium pseudogenitalium ATCC 33035] gi|311305372|gb|EFQ81440.1| crossover junction ATP-dependent DNA helicase RuvB [Corynebacterium pseudogenitalium ATCC 33035] Length=359 Score = 504 bits (1297), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 252/342 (74%), Positives = 293/342 (86%), Gaps = 2/342 (0%) Query 2 TERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILL 61 T + + DV E DI+ SLRP+SL EFIGQP+VREQL LV++GAKNRG TPDH+LL Sbjct 20 TTQRNSDVDATAHSEEHDIERSLRPKSLEEFIGQPKVREQLSLVLKGAKNRGVTPDHVLL 79 Query 62 SGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 121 SGPPGLGKT++AMII+ ELG+SLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIAR Sbjct 80 SGPPGLGKTTMAMIISQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIAR 139 Query 122 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAH 181 PAEEMLY+AMEDFR+DV+VGKGPGATSIPLE+ PFTLVGATTR+G LTGPLRDRFGFTA Sbjct 140 PAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRAGMLTGPLRDRFGFTAQ 199 Query 182 MDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 241 M++Y+ A+L +V+ R+A IL +E+ DA EI RSRGTPRIANRLLRRVRD+AEV G Sbjct 200 MEYYDTADLTQVIKRAAHILDVEIDHDAAVEIGSRSRGTPRIANRLLRRVRDYAEVNGTG 259 Query 242 VITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEV 301 +I A+ ALEV+DVD++GLDRLDRAVL+AL + GGGPVGVSTLA+AVGEE +TVEEV Sbjct 260 LIDLSAAQGALEVFDVDDMGLDRLDRAVLNALIKGHGGGPVGVSTLAIAVGEEPSTVEEV 319 Query 302 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLF 343 CEP+LVRAGMVART RGRVATA AW HLG+TPP GA+ GLF Sbjct 320 CEPYLVRAGMVARTGRGRVATAAAWRHLGLTPPEGAA--GLF 359 >gi|227542216|ref|ZP_03972265.1| Holliday junction DNA helicase B [Corynebacterium glucuronolyticum ATCC 51866] gi|227182045|gb|EEI63017.1| Holliday junction DNA helicase B [Corynebacterium glucuronolyticum ATCC 51866] Length=365 Score = 504 bits (1297), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 253/335 (76%), Positives = 291/335 (87%), Gaps = 2/335 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 VSP + D++VSLRP+S+ EFIGQ +VR+QL+LV+EGAK RG PDH+LLSGPPGLG Sbjct 33 VSPEKQETDHDLEVSLRPKSIDEFIGQDKVRKQLRLVLEGAKKRGSAPDHVLLSGPPGLG 92 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KT++AMIIA ELG+SLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIARPAEEMLY Sbjct 93 KTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEMLY 152 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 +AMEDFR+DV+VGKGPGATSIPLE+APFTLVGATTRSG LTGPLRDRFGFTAHM+FY P Sbjct 153 MAMEDFRIDVIVGKGPGATSIPLELAPFTLVGATTRSGMLTGPLRDRFGFTAHMEFYSPK 212 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 +L V+ R+A ILG+ + +A AEIA RSRGTPRIANRLLRRVRD+AEV +DG I D A Sbjct 213 DLTSVVLRAAKILGVNIDKEAAAEIAGRSRGTPRIANRLLRRVRDYAEVHSDGHIDVDAA 272 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 K AL V+DVDE GLDRLDRAVL+AL + GGGPVGVSTLA+AVGEE +TVEEVCEP+LVR Sbjct 273 KTALVVFDVDEKGLDRLDRAVLNALIKGHGGGPVGVSTLAIAVGEEPSTVEEVCEPYLVR 332 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGLF 343 AG+++RT RGRVATA AW HLG+TPP GA GLF Sbjct 333 AGLISRTGRGRVATAAAWQHLGLTPPDGAL--GLF 365 >gi|227488787|ref|ZP_03919103.1| Holliday junction DNA helicase B [Corynebacterium glucuronolyticum ATCC 51867] gi|227091209|gb|EEI26521.1| Holliday junction DNA helicase B [Corynebacterium glucuronolyticum ATCC 51867] Length=365 Score = 503 bits (1296), Expect = 1e-140, Method: Compositional matrix adjust. Identities = 253/335 (76%), Positives = 291/335 (87%), Gaps = 2/335 (0%) Query 9 VSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGLG 68 VSP + D++VSLRP+S+ EFIGQ +VR+QL+LV+EGAK RG PDH+LLSGPPGLG Sbjct 33 VSPEKQETDHDLEVSLRPKSIDEFIGQDKVRKQLRLVLEGAKKRGSAPDHVLLSGPPGLG 92 Query 69 KTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEMLY 128 KT++AMIIA ELG+SLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIARPAEEMLY Sbjct 93 KTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEMLY 152 Query 129 LAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPA 188 +AMEDFR+DV+VGKGPGATSIPLE+APFTLVGATTRSG LTGPLRDRFGFTAHM+FY P Sbjct 153 MAMEDFRIDVIVGKGPGATSIPLELAPFTLVGATTRSGMLTGPLRDRFGFTAHMEFYSPK 212 Query 189 ELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVA 248 +L V+ R+A ILG+ + +A AEIA RSRGTPRIANRLLRRVRD+AEV +DG I D A Sbjct 213 DLTAVVLRAAKILGVNIDKEAAAEIAGRSRGTPRIANRLLRRVRDYAEVHSDGHIDVDAA 272 Query 249 KAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLVR 308 K AL V+DVDE GLDRLDRAVL+AL + GGGPVGVSTLA+AVGEE +TVEEVCEP+LVR Sbjct 273 KTALVVFDVDEKGLDRLDRAVLNALIKGHGGGPVGVSTLAIAVGEEPSTVEEVCEPYLVR 332 Query 309 AGMVARTPRGRVATALAWTHLGMTPPVGASQPGLF 343 AG+++RT RGRVATA AW HLG+TPP GA GLF Sbjct 333 AGLISRTGRGRVATAAAWQHLGLTPPDGAL--GLF 365 >gi|255325095|ref|ZP_05366201.1| holliday junction DNA helicase RuvB [Corynebacterium tuberculostearicum SK141] gi|255297660|gb|EET76971.1| holliday junction DNA helicase RuvB [Corynebacterium tuberculostearicum SK141] Length=359 Score = 503 bits (1296), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 252/342 (74%), Positives = 293/342 (86%), Gaps = 2/342 (0%) Query 2 TERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILL 61 + + + DV E DI+ SLRP+SL EFIGQP+VREQL LVI+GAKNRG TPDH+LL Sbjct 20 SSQRNSDVEATAHSEEHDIERSLRPKSLDEFIGQPKVREQLSLVIKGAKNRGVTPDHVLL 79 Query 62 SGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIAR 121 SGPPGLGKT++AMII+ ELG+SLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIAR Sbjct 80 SGPPGLGKTTMAMIISQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIAR 139 Query 122 PAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAH 181 PAEEMLY+AMEDFR+DV+VGKGPGATSIPLE+ PFTLVGATTR+G LTGPLRDRFGFTA Sbjct 140 PAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRAGMLTGPLRDRFGFTAQ 199 Query 182 MDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADG 241 M++Y+ A+L +V+ R+A IL +E+ DA EI RSRGTPRIANRLLRRVRD+AEV G Sbjct 200 MEYYDTADLTQVIKRAAHILDVEIDHDAAVEIGSRSRGTPRIANRLLRRVRDYAEVNGTG 259 Query 242 VITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEV 301 +I A+ ALEV+DVD++GLDRLDRAVL+AL + GGGPVGVSTLA+AVGEE +TVEEV Sbjct 260 LIDLSAAQGALEVFDVDDMGLDRLDRAVLNALIKGHGGGPVGVSTLAIAVGEEPSTVEEV 319 Query 302 CEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLF 343 CEP+LVRAGMVART RGRVATA AW HLG+TPP GA+ GLF Sbjct 320 CEPYLVRAGMVARTGRGRVATAAAWRHLGLTPPEGAA--GLF 359 >gi|336325688|ref|YP_004605654.1| Holliday junction DNA helicase [Corynebacterium resistens DSM 45100] gi|336101670|gb|AEI09490.1| Holliday junction DNA helicase [Corynebacterium resistens DSM 45100] Length=362 Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 250/329 (76%), Positives = 289/329 (88%), Gaps = 0/329 (0%) Query 8 DVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPPGL 67 D+S G+ D++ SLRP+SL EFIGQP+VR QL LV+ GA+ RG PDH+LL+GPPGL Sbjct 30 DLSAGQVPGDSDVESSLRPKSLSEFIGQPKVRTQLDLVLGGARTRGVVPDHVLLAGPPGL 89 Query 68 GKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEEML 127 GKT++AMIIA ELGSSLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIARPAEEML Sbjct 90 GKTTMAMIIAQELGSSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEML 149 Query 128 YLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEP 187 Y+AMEDFR+DV+VGKGPGATSIP+EVAPFTLVGATTR+G LTGPLRDRFGFTA M+FY+ Sbjct 150 YMAMEDFRIDVIVGKGPGATSIPIEVAPFTLVGATTRAGMLTGPLRDRFGFTAQMEFYDV 209 Query 188 AELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDV 247 +L RV+ R+AGILG+ + +DA +EIA RSRGTPRIANRLLRRVRDFA+V ADG +T +V Sbjct 210 EDLTRVVTRAAGILGVHVDSDAASEIASRSRGTPRIANRLLRRVRDFADVNADGRVTLEV 269 Query 248 AKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPFLV 307 AKAAL V+DVDE GLDRLDRAVL AL R GGGPVGV+TLA+AVGEE +TVEEVCEP+LV Sbjct 270 AKAALLVFDVDESGLDRLDRAVLDALVRGHGGGPVGVNTLAIAVGEEPSTVEEVCEPYLV 329 Query 308 RAGMVARTPRGRVATALAWTHLGMTPPVG 336 RAGM+ARTPRGRVATA AW H+G+ PP G Sbjct 330 RAGMLARTPRGRVATAAAWRHVGLEPPEG 358 >gi|172040616|ref|YP_001800330.1| Holliday junction DNA helicase RuvB [Corynebacterium urealyticum DSM 7109] gi|171851920|emb|CAQ04896.1| ruvB [Corynebacterium urealyticum DSM 7109] Length=367 Score = 500 bits (1287), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 249/337 (74%), Positives = 295/337 (88%), Gaps = 2/337 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 + ++S A G+ + D SLRP+SL EFIGQP+VR+QL+LV+ GA++RG PDH+LL+GPP Sbjct 33 NSELSGAQIPGDTEFDSSLRPKSLTEFIGQPKVRQQLELVLGGARSRGVAPDHVLLAGPP 92 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKT++AMIIA ELGSSLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHR+ARPAEE Sbjct 93 GLGKTTMAMIIAQELGSSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRMARPAEE 152 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLY+AMEDFR+DV+VGKGPGATSIP+E+APFTLVGATTR+G LTGPLRDRFGFTA M+FY Sbjct 153 MLYMAMEDFRIDVIVGKGPGATSIPIEIAPFTLVGATTRAGMLTGPLRDRFGFTAQMEFY 212 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 + EL RV+ R+AGILG+++ +DA EIA RSRGTPRIANRLLRRVRD+A+V+ADG IT Sbjct 213 DTPELTRVVTRAAGILGVDIDSDAATEIASRSRGTPRIANRLLRRVRDYADVQADGRITV 272 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 D+A+ AL V+DVDE+GLDRLD VL AL R GGGPVGV+TLA+AVGEE +TVEEVCEPF Sbjct 273 DIARQALVVFDVDEVGLDRLDNGVLEALVRGHGGGPVGVNTLALAVGEEPSTVEEVCEPF 332 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGL 342 LVRAGMVARTPRGRVATA AW H+G+ PP A PG+ Sbjct 333 LVRAGMVARTPRGRVATAAAWRHVGLEPPENA--PGM 367 >gi|227504982|ref|ZP_03935031.1| crossover junction endodeoxyribonuclease [Corynebacterium striatum ATCC 6940] gi|227198432|gb|EEI78480.1| crossover junction endodeoxyribonuclease [Corynebacterium striatum ATCC 6940] Length=367 Score = 499 bits (1286), Expect = 2e-139, Method: Compositional matrix adjust. Identities = 250/343 (73%), Positives = 287/343 (84%), Gaps = 0/343 (0%) Query 1 MTERSDRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHIL 60 M+ + DV GE DI+ SLRP+S+ EFIGQP+VREQL LV+ GAKNRG TPDH+L Sbjct 25 MSAARNADVDATKQQGEHDIERSLRPKSIDEFIGQPKVREQLSLVLNGAKNRGVTPDHVL 84 Query 61 LSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIA 120 LSGPPGLGKT++AMIIA ELG+SLR+TSGPALERAGDLAAMLSNL+E DVLFIDEIHRIA Sbjct 85 LSGPPGLGKTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIA 144 Query 121 RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTA 180 RPAEEMLY+AMEDFR+DV+VGKGPGATSIPLE+ PFTLVGATTR+G LTGPLRDRFGFTA Sbjct 145 RPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRAGMLTGPLRDRFGFTA 204 Query 181 HMDFYEPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRAD 240 M++Y+ A+L +V+ R+A IL +E+ DA EI RSRGTPRIANRLLRRVRDFAEV D Sbjct 205 QMEYYDTADLTKVITRAATILDVEIDQDAAVEIGSRSRGTPRIANRLLRRVRDFAEVNGD 264 Query 241 GVITRDVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEE 300 G I A+ AL V+DVDE+GLDRLDRAVL AL + GGGPVGV+TLAVAVGEE +TVEE Sbjct 265 GHIDLAAAQGALAVFDVDEMGLDRLDRAVLEALIKGHGGGPVGVNTLAVAVGEEPSTVEE 324 Query 301 VCEPFLVRAGMVARTPRGRVATALAWTHLGMTPPVGASQPGLF 343 VCEP+LVRAGM+ART RGRVATA AW H+G+ PP G LF Sbjct 325 VCEPYLVRAGMIARTGRGRVATAAAWRHIGLEPPEGTLGEVLF 367 >gi|296393860|ref|YP_003658744.1| Holliday junction DNA helicase RuvB [Segniliparus rotundus DSM 44985] gi|296181007|gb|ADG97913.1| Holliday junction DNA helicase RuvB [Segniliparus rotundus DSM 44985] Length=348 Score = 499 bits (1284), Expect = 4e-139, Method: Compositional matrix adjust. Identities = 249/329 (76%), Positives = 282/329 (86%), Gaps = 0/329 (0%) Query 6 DRDVSPALTVGEGDIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGGTPDHILLSGPP 65 DR + P GE ++D SLRPR+L +FIGQ +VREQL+L++ GAK+RG PDH+L SGPP Sbjct 8 DRPLQPEQVPGEAELDASLRPRALDDFIGQAKVREQLRLLLHGAKSRGTVPDHVLFSGPP 67 Query 66 GLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLVEHDVLFIDEIHRIARPAEE 125 GLGKTSLAMI+A+ELG +LR+TSGPALERAGDLAA+LSNLVE DVLFIDEIHR+ARPAEE Sbjct 68 GLGKTSLAMIVASELGCALRLTSGPALERAGDLAALLSNLVEGDVLFIDEIHRMARPAEE 127 Query 126 MLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFY 185 MLYLAMEDFRVDVVVGKGPGA +IPL +APFTLVGATTR+GALT PLRDRFGF HM+FY Sbjct 128 MLYLAMEDFRVDVVVGKGPGAMAIPLTLAPFTLVGATTRTGALTNPLRDRFGFVGHMEFY 187 Query 186 EPAELERVLARSAGILGIELGADAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITR 245 P EL +VLARSA IL +EL DA EIA RSRGTPRIANRLLRRVRD+A+VR DGV+ Sbjct 188 TPPELAQVLARSAKILAVELAPDAAIEIASRSRGTPRIANRLLRRVRDYAQVRGDGVVDL 247 Query 246 DVAKAALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEAATVEEVCEPF 305 A+AAL+++DVDELGLDRLDRAVLSAL GGGPVGVSTLAVAVGEE ATV EVCEPF Sbjct 248 AAARAALQIFDVDELGLDRLDRAVLSALVSGHGGGPVGVSTLAVAVGEEPATVAEVCEPF 307 Query 306 LVRAGMVARTPRGRVATALAWTHLGMTPP 334 LVRAG+VARTPRGRVAT W H+G+ PP Sbjct 308 LVRAGLVARTPRGRVATQAGWAHMGLKPP 336 Lambda K H 0.319 0.138 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 629895873072 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40