BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2597 Length=206 Score E Sequences producing significant alignments: (Bits) Value gi|15609734|ref|NP_217113.1| hypothetical protein Rv2597 [Mycoba... 411 2e-113 gi|306780635|ref|ZP_07418972.1| membrane protein [Mycobacterium ... 410 6e-113 gi|167967071|ref|ZP_02549348.1| hypothetical membrane protein [M... 410 6e-113 gi|289448247|ref|ZP_06437991.1| membrane protein [Mycobacterium ... 410 8e-113 gi|240173171|ref|ZP_04751829.1| hypothetical protein MkanA1_2791... 346 2e-93 gi|183982122|ref|YP_001850413.1| hypothetical protein MMAR_2108 ... 332 2e-89 gi|118617338|ref|YP_905670.1| hypothetical protein MUL_1713 [Myc... 325 3e-87 gi|296170847|ref|ZP_06852408.1| conserved hypothetical protein [... 324 6e-87 gi|289746390|ref|ZP_06505768.1| conserved hypothetical protein [... 322 3e-86 gi|342858578|ref|ZP_08715233.1| hypothetical protein MCOL_06871 ... 314 6e-84 gi|118464642|ref|YP_882658.1| hypothetical protein MAV_3476 [Myc... 312 2e-83 gi|41407133|ref|NP_959969.1| hypothetical protein MAP1035c [Myco... 311 5e-83 gi|254775925|ref|ZP_05217441.1| hypothetical protein MaviaA2_148... 310 7e-83 gi|254821996|ref|ZP_05226997.1| hypothetical protein MintA_18832... 309 2e-82 gi|126434454|ref|YP_001070145.1| hypothetical protein Mjls_1866 ... 259 1e-67 gi|108798854|ref|YP_639051.1| hypothetical protein Mmcs_1886 [My... 256 1e-66 gi|339299093|gb|AEJ51203.1| hypothetical protein CCDC5180_2366 [... 246 2e-63 gi|319949179|ref|ZP_08023268.1| hypothetical protein ES5_07197 [... 197 1e-48 gi|227506038|ref|ZP_03936087.1| conserved hypothetical protein [... 178 3e-43 gi|225020607|ref|ZP_03709799.1| hypothetical protein CORMATOL_00... 175 4e-42 gi|145296702|ref|YP_001139523.1| hypothetical protein cgR_2607 [... 171 4e-41 gi|259505895|ref|ZP_05748797.1| secreted or membrane protein [Co... 171 6e-41 gi|19553899|ref|NP_601901.1| hypothetical protein NCgl2612 [Cory... 171 9e-41 gi|25029107|ref|NP_739161.1| hypothetical protein CE2551 [Coryne... 170 1e-40 gi|336324734|ref|YP_004604700.1| hypothetical protein CRES_0173 ... 169 3e-40 gi|111019309|ref|YP_702281.1| hypothetical protein RHA1_ro02317 ... 153 2e-35 gi|226361449|ref|YP_002779227.1| hypothetical protein ROP_20350 ... 149 2e-34 gi|325677003|ref|ZP_08156674.1| hypothetical protein HMPREF0724_... 144 9e-33 gi|312140250|ref|YP_004007586.1| hypothetical protein REQ_28880 ... 143 1e-32 gi|226308711|ref|YP_002768671.1| hypothetical protein RER_52240 ... 140 9e-32 gi|229488356|ref|ZP_04382222.1| conserved hypothetical protein [... 140 2e-31 gi|213965087|ref|ZP_03393285.1| conserved hypothetical protein [... 132 4e-29 gi|295395543|ref|ZP_06805737.1| conserved hypothetical protein [... 106 2e-21 gi|297564091|ref|YP_003683064.1| hypothetical protein Ndas_5178 ... 100 1e-19 gi|269125404|ref|YP_003298774.1| hypothetical protein Tcur_1151 ... 99.8 2e-19 gi|260905320|ref|ZP_05913642.1| hypothetical protein BlinB_08328... 99.4 3e-19 gi|291298388|ref|YP_003509666.1| hypothetical protein Snas_0862 ... 98.6 5e-19 gi|343925475|ref|ZP_08764994.1| hypothetical protein GOALK_046_0... 97.8 9e-19 gi|238062034|ref|ZP_04606743.1| hypothetical protein MCAG_03000 ... 97.1 1e-18 gi|291006986|ref|ZP_06564959.1| hypothetical protein SeryN2_2090... 96.3 2e-18 gi|72162637|ref|YP_290294.1| hypothetical protein Tfu_2238 [Ther... 94.4 8e-18 gi|159035794|ref|YP_001535047.1| hypothetical protein Sare_0121 ... 94.0 1e-17 gi|134097073|ref|YP_001102734.1| hypothetical protein SACE_0460 ... 90.1 2e-16 gi|262200712|ref|YP_003271920.1| hypothetical protein Gbro_0705 ... 89.0 4e-16 gi|302864675|ref|YP_003833312.1| hypothetical protein Micau_0167... 87.8 1e-15 gi|315500968|ref|YP_004079855.1| hypothetical protein ML5_0151 [... 85.9 4e-15 gi|326328862|ref|ZP_08195196.1| putative secreted or membrane pr... 80.9 1e-13 gi|254410997|ref|ZP_05024775.1| hypothetical protein MC7420_475 ... 77.4 1e-12 gi|158334895|ref|YP_001516067.1| hypothetical protein AM1_1732 [... 65.9 3e-09 gi|296270984|ref|YP_003653616.1| hypothetical protein Tbis_3026 ... 58.2 7e-07 >gi|15609734|ref|NP_217113.1| hypothetical protein Rv2597 [Mycobacterium tuberculosis H37Rv] gi|15842136|ref|NP_337173.1| hypothetical protein MT2673 [Mycobacterium tuberculosis CDC1551] gi|31793781|ref|NP_856274.1| hypothetical protein Mb2628 [Mycobacterium bovis AF2122/97] 60 more sequence titles Length=206 Score = 411 bits (1057), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 205/206 (99%), Positives = 206/206 (100%), Gaps = 0/206 (0%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +GNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS Sbjct 1 MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG Sbjct 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD Sbjct 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 MGWEIATGKSVLAGELTVYPAPPVSA Sbjct 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 >gi|306780635|ref|ZP_07418972.1| membrane protein [Mycobacterium tuberculosis SUMu002] gi|306785399|ref|ZP_07423721.1| membrane protein [Mycobacterium tuberculosis SUMu003] gi|306789999|ref|ZP_07428321.1| membrane protein [Mycobacterium tuberculosis SUMu004] 13 more sequence titles Length=206 Score = 410 bits (1054), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 204/206 (99%), Positives = 206/206 (100%), Gaps = 0/206 (0%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +GNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS Sbjct 1 MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQE+DGRLELAMWVKRTDLGLQPG Sbjct 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEEDGRLELAMWVKRTDLGLQPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD Sbjct 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 MGWEIATGKSVLAGELTVYPAPPVSA Sbjct 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 >gi|167967071|ref|ZP_02549348.1| hypothetical membrane protein [Mycobacterium tuberculosis H37Ra] Length=206 Score = 410 bits (1054), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 204/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +GNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS Sbjct 1 MGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG Sbjct 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 GQHVIDGVTFQETERGHAGYTTEGT GLPAGGEMDYVDCASAGQGADESMLLSFERWAPD Sbjct 121 GQHVIDGVTFQETERGHAGYTTEGTKGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 MGWEIATGKSVLAGELTVYPAPPVSA Sbjct 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 >gi|289448247|ref|ZP_06437991.1| membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289421205|gb|EFD18406.1| membrane protein [Mycobacterium tuberculosis CPHL_A] Length=206 Score = 410 bits (1053), Expect = 8e-113, Method: Compositional matrix adjust. Identities = 204/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +GNLLVVIAVALFIAAIVVLVVAIRRPKTP TPGGRRDPLAFDAMPQFGPRQLGPGAIVS Sbjct 1 MGNLLVVIAVALFIAAIVVLVVAIRRPKTPTTPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG Sbjct 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD Sbjct 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 MGWEIATGKSVLAGELTVYPAPPVSA Sbjct 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 >gi|240173171|ref|ZP_04751829.1| hypothetical protein MkanA1_27911 [Mycobacterium kansasii ATCC 12478] Length=206 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 166/206 (81%), Positives = 189/206 (92%), Gaps = 0/206 (0%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLVV+AVALFIA+++VLVVA++RPKT A PG R+DPL+F+AMPQFGPRQLGPGAIVS Sbjct 1 MGSLLVVLAVALFIASLLVLVVALKRPKTAAPPGSRQDPLSFNAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG+DYVVRGSVT+REGPFVWWEHLLEGGD PTW SV++DDGRLELAMWVKRTDL +QP Sbjct 61 YGGVDYVVRGSVTYREGPFVWWEHLLEGGDQPTWFSVEDDDGRLELAMWVKRTDLAVQPD 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 G V+DGVTF E+ERGHAGYTTEGTTGLPAGGEMDYVD AG+GADE+ LLSFERWAPD Sbjct 121 GDQVLDGVTFHESERGHAGYTTEGTTGLPAGGEMDYVDYVGAGRGADETALLSFERWAPD 180 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 M WEI+TGK+VL GELTVYPAPP SA Sbjct 181 MPWEISTGKAVLPGELTVYPAPPASA 206 >gi|183982122|ref|YP_001850413.1| hypothetical protein MMAR_2108 [Mycobacterium marinum M] gi|183175448|gb|ACC40558.1| conserved protein [Mycobacterium marinum M] Length=202 Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 162/205 (80%), Positives = 180/205 (88%), Gaps = 4/205 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G LLV++AV LFIA+I+VL VA+RRPKTPA PG R+DPLAF+AMPQFGPRQLGPGAIVS Sbjct 1 MGTLLVLLAVMLFIASIIVLTVALRRPKTPARPGQRQDPLAFNAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG+DYVVRGSVTFREGPFVWWEHLLEGGD P W SV+ED+GRLELAMW KRTDL LQP Sbjct 61 YGGVDYVVRGSVTFREGPFVWWEHLLEGGDEPIWFSVEEDEGRLELAMWTKRTDLALQPS 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 G HV+DGVTF+E ERG AGYTTEGTTGLPAGG+MDYVD S ADES LL FERWAPD Sbjct 121 GVHVVDGVTFREEERGRAGYTTEGTTGLPAGGDMDYVDYVS----ADESALLGFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVS 205 M WEI+TGK+VL GELTVYPAPP + Sbjct 177 MPWEISTGKTVLTGELTVYPAPPAA 201 >gi|118617338|ref|YP_905670.1| hypothetical protein MUL_1713 [Mycobacterium ulcerans Agy99] gi|118569448|gb|ABL04199.1| conserved protein [Mycobacterium ulcerans Agy99] Length=202 Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 159/205 (78%), Positives = 178/205 (87%), Gaps = 4/205 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G V++AV LFIA+I+VL VA+RRPKTPA PG R+DPLAF+AMPQFGPRQLGPGAIVS Sbjct 1 MGTRPVLLAVMLFIASIIVLTVALRRPKTPARPGQRQDPLAFNAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG+DYVVRGSVTFREGPFVWWEHLLEGGD P W SV+ED+GRLELAMW KRTDL LQP Sbjct 61 YGGVDYVVRGSVTFREGPFVWWEHLLEGGDEPIWFSVEEDEGRLELAMWTKRTDLALQPS 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 G HV+DGVTF+E ERG AGYTTEGTTGLPAGG+MDYVD S AD+S LL FERWAPD Sbjct 121 GVHVVDGVTFREEERGRAGYTTEGTTGLPAGGDMDYVDYVS----ADDSALLGFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVS 205 M WEI+TGK+VL GELTVYPAPP + Sbjct 177 MPWEISTGKTVLTGELTVYPAPPAA 201 >gi|296170847|ref|ZP_06852408.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894503|gb|EFG74244.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=203 Score = 324 bits (830), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 154/206 (75%), Positives = 182/206 (89%), Gaps = 4/206 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLV+IA+ LFIA+IVVLV+A+RRPK P P GR+DPL+F+AMP+FGPRQLGPGAIVS Sbjct 1 MGSLLVIIAIVLFIASIVVLVIALRRPKQPGPPRGRQDPLSFNAMPEFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG+DYVVRGSVT+REGPFVWWEHLLEGGD P W SV+EDDGRLELAMWV R D+ LQPG Sbjct 61 YGGVDYVVRGSVTYREGPFVWWEHLLEGGDQPIWFSVEEDDGRLELAMWVSRKDVRLQPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 Q+V+DGVTF E+ERG A +TTEGTTGLPAGGEM++VDCA+ +DES+LLSFERWAP Sbjct 121 DQYVVDGVTFHESERGRASFTTEGTTGLPAGGEMEFVDCAN----SDESVLLSFERWAPG 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 M WE++TGK VL GELTVYPAPP S+ Sbjct 177 MPWEVSTGKPVLTGELTVYPAPPPSS 202 >gi|289746390|ref|ZP_06505768.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289686918|gb|EFD54406.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=207 Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 161/179 (90%), Positives = 164/179 (92%), Gaps = 7/179 (3%) Query 28 KTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLE 87 + P + G RR+ PRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLE Sbjct 36 RAPGSAGLRRNAA-------IRPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLE 88 Query 88 GGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTG 147 GGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTG Sbjct 89 GGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTG 148 Query 148 LPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA 206 LPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA Sbjct 149 LPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPVSA 207 >gi|342858578|ref|ZP_08715233.1| hypothetical protein MCOL_06871 [Mycobacterium colombiense CECT 3035] gi|342134282|gb|EGT87462.1| hypothetical protein MCOL_06871 [Mycobacterium colombiense CECT 3035] Length=203 Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 154/203 (76%), Positives = 174/203 (86%), Gaps = 4/203 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLV+IAV LFIA+IVVLVVA+RRPK PA GR DP+A DAMPQFGPRQLGPGAIVS Sbjct 1 MGSLLVMIAVVLFIASIVVLVVALRRPKQPAQRAGRPDPMADDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GGIDY+VRGSVTFREGPFVWWEHLLEGGD P W SV+EDDGRLELAMWV R D+ L+PG Sbjct 61 YGGIDYIVRGSVTFREGPFVWWEHLLEGGDQPIWFSVEEDDGRLELAMWVTRKDVPLRPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 +V+DGV F E+ERG A YTTEGTTGLPAGGEM++VDC + DES LLSFERWAPD Sbjct 121 DPYVVDGVMFHESERGRASYTTEGTTGLPAGGEMEFVDCTN----DDESALLSFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPP 203 M WE++TGKSV GE+TVYPAPP Sbjct 177 MPWEVSTGKSVSPGEITVYPAPP 199 >gi|118464642|ref|YP_882658.1| hypothetical protein MAV_3476 [Mycobacterium avium 104] gi|118165929|gb|ABK66826.1| conserved hypothetical protein [Mycobacterium avium 104] Length=203 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 149/206 (73%), Positives = 176/206 (86%), Gaps = 4/206 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLV++A+ LFIA+IVVLVVA+RRPK PA P GR DPLA DA+PQFGPRQLGPGA+VS Sbjct 1 MGSLLVMLAIVLFIASIVVLVVALRRPKQPARPAGRPDPLAADALPQFGPRQLGPGAVVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG DY+VRGSVT+REGPFVWWEHLLEGGD P W SV+EDDGRL+LA+WV R DL L+PG Sbjct 61 YGGTDYIVRGSVTYREGPFVWWEHLLEGGDQPLWFSVEEDDGRLQLALWVTRKDLSLRPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 +V+DGVTF E+ERG A YTTEGTTGLPAGGEM++VDC + ADE+ LLSFERWAPD Sbjct 121 DNYVVDGVTFHESERGRASYTTEGTTGLPAGGEMEFVDCTN----ADETALLSFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 M WE++TGK V GE+TVY APP S+ Sbjct 177 MPWEVSTGKPVSPGEITVYAAPPPSS 202 >gi|41407133|ref|NP_959969.1| hypothetical protein MAP1035c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395484|gb|AAS03352.1| hypothetical protein MAP_1035c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461479|gb|EGO40348.1| hypothetical protein MAPs_30240 [Mycobacterium avium subsp. paratuberculosis S397] Length=203 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 148/206 (72%), Positives = 176/206 (86%), Gaps = 4/206 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLV++A+ LFIA+IVVLVVA+RRPK PA P GR DPLA DA+PQFGPRQLGPGA+VS Sbjct 1 MGSLLVMLAIVLFIASIVVLVVALRRPKQPARPAGRPDPLAADALPQFGPRQLGPGAVVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG DY+VRGSVT+REGPFVWWEHLLEGGD P W SV+EDDGRL+LA+WV R DL L+PG Sbjct 61 YGGTDYIVRGSVTYREGPFVWWEHLLEGGDQPLWFSVEEDDGRLQLALWVTRKDLSLRPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 +V+DGVTF E+ERG A YTTEGTTGLPAGGEM++VDC + ADE+ LLSFERWAPD Sbjct 121 DNYVVDGVTFHESERGRASYTTEGTTGLPAGGEMEFVDCTN----ADETALLSFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 M WE++TG+ V GE+TVY APP S+ Sbjct 177 MPWEVSTGRPVSPGEITVYAAPPPSS 202 >gi|254775925|ref|ZP_05217441.1| hypothetical protein MaviaA2_14815 [Mycobacterium avium subsp. avium ATCC 25291] Length=203 Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 147/206 (72%), Positives = 176/206 (86%), Gaps = 4/206 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLV++A+ LFIA+IVVLVVA+RRPK PA P GR DPLA DA+PQFGPRQLGPGA+VS Sbjct 1 MGSLLVMLAIVLFIASIVVLVVALRRPKQPARPAGRPDPLAADALPQFGPRQLGPGAVVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG DY+VRGSVT+REGPFVWWEHLLEGGD P W S++EDDGRL+LA+WV R DL L+PG Sbjct 61 YGGTDYIVRGSVTYREGPFVWWEHLLEGGDQPLWFSIEEDDGRLQLALWVTRKDLSLRPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 +V+DGVTF E+ERG A YTTEGTTGLPAGGEM++VDC + ADE+ LLSFERWAPD Sbjct 121 DNYVVDGVTFHESERGRASYTTEGTTGLPAGGEMEFVDCTN----ADETALLSFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVSA 206 M WE++TG+ V GE+TVY APP S+ Sbjct 177 MPWEVSTGRPVSPGEITVYAAPPPSS 202 >gi|254821996|ref|ZP_05226997.1| hypothetical protein MintA_18832 [Mycobacterium intracellulare ATCC 13950] Length=203 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 150/205 (74%), Positives = 173/205 (85%), Gaps = 4/205 (1%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVS 60 +G+LLVV+A+ LFIA+IVVLV+A+RRPK PA GR DPLA DAMPQFGPRQLGPGAIVS Sbjct 1 MGSLLVVLAIVLFIASIVVLVIALRRPKRPAERAGRPDPLASDAMPQFGPRQLGPGAIVS 60 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPG 120 +GG DY+VRGSVTFREGPFVWWEHLLEGGD P W SV+EDDGRLELAMW+ R D+ L+PG Sbjct 61 YGGTDYIVRGSVTFREGPFVWWEHLLEGGDQPIWFSVEEDDGRLELAMWITRKDVPLRPG 120 Query 121 GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 +V+DG F ETERG A YTTEGTTGLPAGGEM++VDC + DE++LLSFERWAPD Sbjct 121 DPYVVDGAMFHETERGRASYTTEGTTGLPAGGEMEFVDCTN----EDETVLLSFERWAPD 176 Query 181 MGWEIATGKSVLAGELTVYPAPPVS 205 M WE++TGK+V GELTVY APP S Sbjct 177 MPWEVSTGKAVSPGELTVYAAPPPS 201 >gi|126434454|ref|YP_001070145.1| hypothetical protein Mjls_1866 [Mycobacterium sp. JLS] gi|126234254|gb|ABN97654.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=196 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/200 (63%), Positives = 151/200 (76%), Gaps = 4/200 (2%) Query 7 VIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDY 66 ++A+ALF A++ LV+ +R K P T R DPL F +FGPRQLGPGAIVS+GG+D Sbjct 1 MLAIALFAGAVIALVLGFKRSKKPKTEPQRTDPLRFSTPQEFGPRQLGPGAIVSYGGVDL 60 Query 67 VVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVID 126 +VRGSVT R+GPFVWWEHLLEGGD P W SV+ED+GRLELAMW +R DL L+PGG HV+D Sbjct 61 IVRGSVTLRQGPFVWWEHLLEGGDEPVWFSVEEDEGRLELAMWTRRPDLRLEPGGSHVVD 120 Query 127 GVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIA 186 G+ F ETERG A YTTEGTTGLPAGG+M++VD A L FERWAP+M WEI+ Sbjct 121 GIGFVETERGRASYTTEGTTGLPAGGDMEFVDYAD----NTGDTFLGFERWAPEMPWEIS 176 Query 187 TGKSVLAGELTVYPAPPVSA 206 G++V GELTVYPAPP + Sbjct 177 IGRTVRPGELTVYPAPPAGS 196 >gi|108798854|ref|YP_639051.1| hypothetical protein Mmcs_1886 [Mycobacterium sp. MCS] gi|119867969|ref|YP_937921.1| hypothetical protein Mkms_1932 [Mycobacterium sp. KMS] gi|108769273|gb|ABG07995.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694058|gb|ABL91131.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=196 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 124/200 (62%), Positives = 150/200 (75%), Gaps = 4/200 (2%) Query 7 VIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDY 66 ++A+ALF A++ LV+ +R K P T R DPL F +FGPRQLGPGAIVS+GG+D Sbjct 1 MLAIALFAGAVIALVLGFKRSKKPKTEPQRTDPLRFSTPQEFGPRQLGPGAIVSYGGVDL 60 Query 67 VVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVID 126 +VRGSVT R+GPFVWWEHLLEGGD P W SV+ED+GRLELAMW +R DL L+PGG HV+D Sbjct 61 IVRGSVTLRQGPFVWWEHLLEGGDEPVWFSVEEDEGRLELAMWTRRPDLRLEPGGSHVVD 120 Query 127 GVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIA 186 G+ F ETERG A YTTEGTTGLPAGG+M++VD A L FERWAP+M WEI+ Sbjct 121 GIGFVETERGRASYTTEGTTGLPAGGDMEFVDYAD----NTGDTFLGFERWAPEMPWEIS 176 Query 187 TGKSVLAGELTVYPAPPVSA 206 G++V ELTVYPAPP + Sbjct 177 IGRTVRPVELTVYPAPPAGS 196 >gi|339299093|gb|AEJ51203.1| hypothetical protein CCDC5180_2366 [Mycobacterium tuberculosis CCDC5180] Length=122 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 85 LLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEG 144 +LEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEG Sbjct 1 MLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEG 60 Query 145 TTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPV 204 TTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPV Sbjct 61 TTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPPV 120 Query 205 SA 206 SA Sbjct 121 SA 122 >gi|319949179|ref|ZP_08023268.1| hypothetical protein ES5_07197 [Dietzia cinnamea P4] gi|319437165|gb|EFV92196.1| hypothetical protein ES5_07197 [Dietzia cinnamea P4] Length=208 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 107/206 (52%), Positives = 138/206 (67%), Gaps = 6/206 (2%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDA-MPQFGPRQLGPGAIV 59 +G LLV++ + + + AI+ ++ R K PAT RRDPLA D + FGPR+LGPGAIV Sbjct 1 MGELLVIVGLVVAVIAIIGIIAKARSGKRPATAAPRRDPLAADQPVHGFGPRELGPGAIV 60 Query 60 SHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQP 119 ++GGIDYVVRGS+T R+GP+VWWEHLLEGGD WL V+ED+G LEL W R LG+ P Sbjct 61 AYGGIDYVVRGSITLRQGPYVWWEHLLEGGDGAQWLGVEEDEGTLELTWWTTRKGLGVSP 120 Query 120 GGQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAP 179 G + ++D + E G A Y+ EGTTGLP G M Y D + D S LLSFE W Sbjct 121 GAEVIVDDRVHRLEESGEAEYSCEGTTGLPERGRMRYQDMRT----GDGSSLLSFENWD- 175 Query 180 DMGWEIATGKSVLAGELTVYPAPPVS 205 GWE+++G+ + GELTVYPAPP + Sbjct 176 GAGWEVSSGRPMSRGELTVYPAPPAA 201 >gi|227506038|ref|ZP_03936087.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197320|gb|EEI77368.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=203 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 95/207 (46%), Positives = 128/207 (62%), Gaps = 11/207 (5%) Query 1 VGNLLVVIAVALFIAAIVVLVVAIRRPKTPATPGG---RRDPLA-FDAMPQFGPRQLGPG 56 + + ++AV L IAAI + + + A G +D A +F P +LGPG Sbjct 1 MNKIFFLLAVVLLIAAIYMFFKSRQAKAASAQETGDTFSKDYFAEAKGQNEFNPEKLGPG 60 Query 57 AIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLG 116 AI+ +G DYVVRG++T EGP+ W+E+LL+GGD +WL V+ D+G+L L W R G Sbjct 61 AIIRYGATDYVVRGTLTLNEGPYYWYEYLLDGGDNSSWLGVEVDEGQLNLTWWTSRKGAG 120 Query 117 LQPG-GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFE 175 + PG G +GVT+ E ERGHA YT+ GTTGLP GEM YVD SAG+ LL FE Sbjct 121 VTPGRGTVEFEGVTYSEDERGHARYTSTGTTGLPESGEMRYVDY-SAGE-----KLLGFE 174 Query 176 RWAPDMGWEIATGKSVLAGELTVYPAP 202 WA + WE++TG+++L GE TVYPAP Sbjct 175 GWANNDSWEVSTGRTMLPGEFTVYPAP 201 >gi|225020607|ref|ZP_03709799.1| hypothetical protein CORMATOL_00614 [Corynebacterium matruchotii ATCC 33806] gi|305679760|ref|ZP_07402570.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|224946553|gb|EEG27762.1| hypothetical protein CORMATOL_00614 [Corynebacterium matruchotii ATCC 33806] gi|305660380|gb|EFM49877.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=209 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 90/172 (53%), Positives = 111/172 (65%), Gaps = 9/172 (5%) Query 36 RRDPLAFDA----MPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDT 91 R DPLAF A F P+ +GPGAI+S GGIDYVVRG+VT +GPFVW+EH+++GG Sbjct 41 RNDPLAFAAGVSGENDFNPQVIGPGAILSRGGIDYVVRGTVTLSQGPFVWYEHMIDGGSG 100 Query 92 PTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAG 151 WLSV+ D+G+LEL +W R DL L P +DGVT++E ERG A YTTEGTTGLPA Sbjct 101 SLWLSVEVDEGQLELVLWNPRKDLNLDPHATIEVDGVTYREIERGGARYTTEGTTGLPAA 160 Query 152 GEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPP 203 G+M YVD M L E++ P WE G+ V GE V+PAPP Sbjct 161 GDMSYVDYEGP-----NGMRLGLEKYGPTTPWEATIGQVVTPGEFNVFPAPP 207 >gi|145296702|ref|YP_001139523.1| hypothetical protein cgR_2607 [Corynebacterium glutamicum R] gi|140846622|dbj|BAF55621.1| hypothetical protein [Corynebacterium glutamicum R] gi|344046232|gb|EGV41898.1| hypothetical protein CgS9114_00735 [Corynebacterium glutamicum S9114] Length=203 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/202 (45%), Positives = 125/202 (62%), Gaps = 5/202 (2%) Query 5 LVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAF-DAMPQFGPRQLGPGAIVSHGG 63 L++ V IA + + A ++ P P R+DPL F D F R LGPGAI+S GG Sbjct 6 LILAGVLAIIAVVFFYLSAQKKKSEPQPPRQRQDPLKFADGSDTFNARILGPGAIISRGG 65 Query 64 IDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQH 123 +DYV RG++ FR+G ++W E+LL+GG +LSV+ D+G+L L W+ R DL QP Sbjct 66 VDYVCRGAIQFRQGQYIWHEYLLDGGKGSEYLSVEYDEGQLNLGWWITRPDLAQQPAHDV 125 Query 124 VIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGW 183 ++GV +++TE G +T+EGTTG+ GE +Y D A G S LLSFER+ D + Sbjct 126 TVEGVRYRKTESGVGTFTSEGTTGVADQGEFEYWDLAEVGG----SRLLSFERYGKDSPF 181 Query 184 EIATGKSVLAGELTVYPAPPVS 205 E++ G +VL GELTVYPAP S Sbjct 182 EVSLGWTVLPGELTVYPAPEAS 203 >gi|259505895|ref|ZP_05748797.1| secreted or membrane protein [Corynebacterium efficiens YS-314] gi|259166499|gb|EEW51053.1| secreted or membrane protein [Corynebacterium efficiens YS-314] Length=201 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 90/198 (46%), Positives = 124/198 (63%), Gaps = 5/198 (2%) Query 6 VVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAF-DAMPQFGPRQLGPGAIVSHGGI 64 +++A+ L + A+V V++ ++ P R DPL F DA FGP LGPGAIV +GG+ Sbjct 6 LILAIILAVIAVVFFVLSAKKKNAEQPPRPREDPLKFSDASADFGPDVLGPGAIVGYGGV 65 Query 65 DYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV 124 DYV RG VT R+G + W+E+LLEGG +LSV D+G+L L+ W+ R DL +QP + Sbjct 66 DYVCRGGVTMRQGAYTWYEYLLEGGKGGEYLSVDYDEGQLNLSWWISRPDLDVQPANELT 125 Query 125 IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWE 184 ++GV +++ E G + +EGTTGLP G +Y D A AG LL FER+ D E Sbjct 126 VEGVRYRKVESGVGQFYSEGTTGLPESGRFEYWDMAEAGG----KRLLGFERFGEDGPLE 181 Query 185 IATGKSVLAGELTVYPAP 202 + G +VL GELTVYPAP Sbjct 182 ASLGWTVLPGELTVYPAP 199 >gi|19553899|ref|NP_601901.1| hypothetical protein NCgl2612 [Corynebacterium glutamicum ATCC 13032] gi|62391542|ref|YP_226944.1| hypothetical protein cg2994 [Corynebacterium glutamicum ATCC 13032] gi|21325478|dbj|BAC00100.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41326884|emb|CAF20728.1| putative secreted or membrane protein [Corynebacterium glutamicum ATCC 13032] Length=203 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 89/202 (45%), Positives = 125/202 (62%), Gaps = 5/202 (2%) Query 5 LVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAF-DAMPQFGPRQLGPGAIVSHGG 63 L++ V IA + + A ++ P P R+DPL F D F R LGPGAI+S GG Sbjct 6 LILAGVLAIIAVVFFYLSAQKKKSEPQPPRQRQDPLKFADGSDTFNARILGPGAIISRGG 65 Query 64 IDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQH 123 +DYV RG++ FR+G ++W E+LL+GG +LSV+ D+G+L L W+ R DL QP Sbjct 66 VDYVCRGAIQFRQGQYIWHEYLLDGGKGSEYLSVEYDEGQLNLGWWITRPDLAQQPAHDV 125 Query 124 VIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGW 183 ++GV +++TE G +T+EGTTG+ GE +Y D A G + LLSFER+ D + Sbjct 126 TVEGVRYRKTESGVGTFTSEGTTGVADQGEFEYWDLAEVGG----NRLLSFERYGKDSPF 181 Query 184 EIATGKSVLAGELTVYPAPPVS 205 E++ G +VL GELTVYPAP S Sbjct 182 EVSLGWTVLPGELTVYPAPEAS 203 >gi|25029107|ref|NP_739161.1| hypothetical protein CE2551 [Corynebacterium efficiens YS-314] gi|23494394|dbj|BAC19361.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=253 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/198 (46%), Positives = 124/198 (63%), Gaps = 5/198 (2%) Query 6 VVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAF-DAMPQFGPRQLGPGAIVSHGGI 64 +++A+ L + A+V V++ ++ P R DPL F DA FGP LGPGAIV +GG+ Sbjct 58 LILAIILAVIAVVFFVLSAKKKNAEQPPRPREDPLKFSDASADFGPDVLGPGAIVGYGGV 117 Query 65 DYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV 124 DYV RG VT R+G + W+E+LLEGG +LSV D+G+L L+ W+ R DL +QP + Sbjct 118 DYVCRGGVTMRQGAYTWYEYLLEGGKGGEYLSVDYDEGQLNLSWWISRPDLDVQPANELT 177 Query 125 IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWE 184 ++GV +++ E G + +EGTTGLP G +Y D A AG LL FER+ D E Sbjct 178 VEGVRYRKVESGVGQFYSEGTTGLPESGRFEYWDMAEAGG----KRLLGFERFGEDGPLE 233 Query 185 IATGKSVLAGELTVYPAP 202 + G +VL GELTVYPAP Sbjct 234 ASLGWTVLPGELTVYPAP 251 >gi|336324734|ref|YP_004604700.1| hypothetical protein CRES_0173 [Corynebacterium resistens DSM 45100] gi|336100716|gb|AEI08536.1| hypothetical protein CRES_0173 [Corynebacterium resistens DSM 45100] Length=200 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 85/201 (43%), Positives = 127/201 (64%), Gaps = 8/201 (3%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPL--AFDAMPQFGPRQLGPGAIVSH 61 + + IA+AL + A+ V + ++ R+DP A A P +GP+ LGPGAI+S Sbjct 4 VFLAIAIALIVFAVYAFVQSKKQKNQQPVQAPRQDPFQGAQGAEP-YGPQSLGPGAILSR 62 Query 62 GGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGG 121 GGIDYVVRG++T ++GP+ W EH+L+GG+ WLSV+ D+G+L+L +W R DL L Sbjct 63 GGIDYVVRGTLTVQQGPYQWQEHMLDGGNGSQWLSVEMDEGQLDLVLWQTRKDLNLDMRD 122 Query 122 QHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDM 181 IDG+ + E G A + +EG TGLP GE++Y D AS+ ++ LS ER++P Sbjct 123 NVEIDGIQYHRREAGRAMFHSEGNTGLPPQGELEYADYASS-----DNRRLSLERFSPGA 177 Query 182 GWEIATGKSVLAGELTVYPAP 202 WE++ G+++L G+ VYPAP Sbjct 178 MWEVSQGENMLPGDFVVYPAP 198 >gi|111019309|ref|YP_702281.1| hypothetical protein RHA1_ro02317 [Rhodococcus jostii RHA1] gi|110818839|gb|ABG94123.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=198 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 79/180 (44%), Positives = 115/180 (64%), Gaps = 6/180 (3%) Query 25 RRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEH 84 R +TP R DPLA D + P ++G G I+++ GID+VVRG++T E ++W EH Sbjct 23 NRAGKKSTPAARVDPLA-DYPEVYDPYKIGVGDIITYAGIDHVVRGTITLDEEGYIWHEH 81 Query 85 LLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEG 144 LL+G WL+V+ D+G L++ +W++R GL+PGG ++D ++ ERG A +T EG Sbjct 82 LLDGSTGQRWLTVENDEGNLDMTLWMRREGTGLEPGGDVILDDRVHRQIERGTASFTAEG 141 Query 145 TTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTV-YPAPP 203 TTG G +DY D A+ AD++ LLSFERWA WE++TG++V GELTV + PP Sbjct 142 TTGTAPQGIVDYADYAT----ADKTGLLSFERWARTQSWEVSTGRAVTRGELTVIHSGPP 197 >gi|226361449|ref|YP_002779227.1| hypothetical protein ROP_20350 [Rhodococcus opacus B4] gi|226239934|dbj|BAH50282.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=198 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/172 (45%), Positives = 112/172 (66%), Gaps = 6/172 (3%) Query 33 PGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTP 92 P R DPLA D + P ++G G I+++ GID+VVRG++T E ++W EHLL+G Sbjct 31 PAARVDPLA-DYPEVYDPYKIGVGDIITYAGIDHVVRGTITLDEEGYIWHEHLLDGSTGQ 89 Query 93 TWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGG 152 WL+V+ D+G L++ +W++R GL+PGG ++D ++ ERG A +T EGTTG G Sbjct 90 RWLTVENDEGNLDMTLWMRREGTGLEPGGDVILDDRVHRQIERGTASFTAEGTTGTAPQG 149 Query 153 EMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTV-YPAPP 203 +DY D A+ AD++ LLSFERWA WE++TG++V GELTV + PP Sbjct 150 IVDYADYAT----ADKTGLLSFERWARTQSWEVSTGRAVTRGELTVIHSGPP 197 >gi|325677003|ref|ZP_08156674.1| hypothetical protein HMPREF0724_14457 [Rhodococcus equi ATCC 33707] gi|325552165|gb|EGD21856.1| hypothetical protein HMPREF0724_14457 [Rhodococcus equi ATCC 33707] Length=198 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 76/174 (44%), Positives = 109/174 (63%), Gaps = 5/174 (2%) Query 30 PATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGG 89 P + R DPLA D + P ++G G IV++ GID+VVRG++ E + W EHLL+G Sbjct 28 PKSAPRRVDPLA-DYPEVYDPHKIGVGDIVTYAGIDHVVRGTIVLDEEGYQWREHLLDGS 86 Query 90 DTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLP 149 WL+V++D+G LE+ +W++R GL+PGG V+D +++ E G A +T EGTTG Sbjct 87 TGRRWLTVEDDEGELEMTLWMRREGTGLEPGGDVVLDDRVYRKIESGSARFTAEGTTGTA 146 Query 150 AGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPP 203 G MDY D + AD++ LL+FERWA WE++TG++V ELTV A P Sbjct 147 PTGSMDYADYET----ADKTGLLAFERWARTSSWEVSTGRAVTRSELTVIHAGP 196 >gi|312140250|ref|YP_004007586.1| hypothetical protein REQ_28880 [Rhodococcus equi 103S] gi|311889589|emb|CBH48906.1| putative secreted protein [Rhodococcus equi 103S] Length=198 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/174 (44%), Positives = 109/174 (63%), Gaps = 5/174 (2%) Query 30 PATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGG 89 P + R DPLA D + P ++G G I+++ GID+VVRG++ E + W EHLL+G Sbjct 28 PKSAPRRVDPLA-DYPEVYDPHKIGVGDIITYAGIDHVVRGTIVLDEEGYQWREHLLDGS 86 Query 90 DTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLP 149 WL+V++D+G LE+ +W++R GL+PGG V+D +++ E G A +T EGTTG Sbjct 87 TGRRWLTVEDDEGELEMTLWMRREGTGLEPGGDVVLDDRVYRKIESGSARFTAEGTTGTA 146 Query 150 AGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPP 203 G MDY D + AD++ LL+FERWA WE++TG++V ELTV A P Sbjct 147 PTGSMDYADYET----ADKTGLLAFERWARTSSWEVSTGRAVTRSELTVIHAGP 196 >gi|226308711|ref|YP_002768671.1| hypothetical protein RER_52240 [Rhodococcus erythropolis PR4] gi|226187828|dbj|BAH35932.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=210 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 71/172 (42%), Positives = 108/172 (63%), Gaps = 6/172 (3%) Query 33 PGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTP 92 P R DPLA D + P ++G G I+++ GID+VVRG++T E ++W EHLL+G Sbjct 43 PNARVDPLA-DYPEVYDPHKIGVGDIITYAGIDHVVRGTITLDEEGYIWREHLLDGSTGR 101 Query 93 TWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGG 152 WL+V++D+G LE+ +W++R L P G ++D ++ E G A +T EGTTG G Sbjct 102 RWLTVEDDEGELEMTLWMRREGTNLVPNGDVILDDKVHRKIESGTAKFTAEGTTGTAPSG 161 Query 153 EMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTV-YPAPP 203 M+Y D A+ AD++ L++FE+WA WE++TG++V ELTV + PP Sbjct 162 SMEYADYAT----ADKTGLIAFEKWARGQSWEVSTGRAVTRSELTVIHSGPP 209 >gi|229488356|ref|ZP_04382222.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323860|gb|EEN89615.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=210 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/172 (42%), Positives = 108/172 (63%), Gaps = 6/172 (3%) Query 33 PGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTP 92 P R DPLA D + P ++G G I+++ GID+VVRG++T E ++W EHLL+G Sbjct 43 PNARVDPLA-DYPEVYDPHKIGVGDIITYAGIDHVVRGTITLDEEGYIWREHLLDGSTGR 101 Query 93 TWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTEGTTGLPAGG 152 WL+V++D+G LE+ +W++R L P G ++D ++ E G A +T EGTTG G Sbjct 102 RWLTVEDDEGELEMTLWMRREGTDLVPNGDVILDDKVHRKIESGTAKFTAEGTTGTAPSG 161 Query 153 EMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTV-YPAPP 203 M+Y D A+ AD++ L++FE+WA WE++TG++V ELTV + PP Sbjct 162 SMEYADYAT----ADKTGLIAFEKWARGQSWEVSTGRAVTRSELTVIHSGPP 209 >gi|213965087|ref|ZP_03393285.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213952201|gb|EEB63585.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=204 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/179 (42%), Positives = 102/179 (57%), Gaps = 11/179 (6%) Query 28 KTPATPGGRR----DPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWE 83 + PG R DPL D ++GP + PGAI+++GG +VVRGS+ +GPF WWE Sbjct 24 RNTQVPGSDRERFVDPLMTDEYRKYGPTSVAPGAILNYGGASHVVRGSLELSQGPFRWWE 83 Query 84 HLLEGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHVIDGVTFQETERGHAGYTTE 143 HL++GG +W V+ED+G + L W ++ +P V+DGV + E ERG A YT Sbjct 84 HLVDGGADGSWFGVEEDEGEVILTWW-RKLPGSFEPANPIVVDGVEYWEEERGTARYTAI 142 Query 144 GTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYPAP 202 GTTGLP G D+VD S + LL ER+ M WE +TG +L GE+ V AP Sbjct 143 GTTGLPPEGATDFVDYKSG-----DGRLLGLERYGDSM-WEASTGIRILPGEIDVMAAP 195 >gi|295395543|ref|ZP_06805737.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971562|gb|EFG47443.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length=203 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/205 (34%), Positives = 100/205 (49%), Gaps = 15/205 (7%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPATPGGR-----RDPLAFDAMPQFGPRQLGPGAI 58 L + +AL I A++ ++ +++ + G RDP A + P ++ G + Sbjct 4 LAFIFLIALIIGAVIYIIATVKKARNRGETYGETQRTPRDPFATEQDTTGDPFKIRAGDM 63 Query 59 VSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPT--WLSVQEDDGRLELAMWVKRTDLG 116 + G Y VRGS+ F EG + W EH + T WLSV E D L++A+W L Sbjct 64 LQFGDDKYFVRGSIHFTEGVYTWHEHFFQADANATRRWLSV-EADPDLQMALWQDAPGLS 122 Query 117 LQPGGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFE 175 Q G V + + F+ E G A + TEGTTGLP G Y D S D+ LLSFE Sbjct 123 AQAGASVVTYNNMQFRLDESGQANFRTEGTTGLPESGVAYYADYES-----DDGTLLSFE 177 Query 176 RWAPDMGWEIATGKSVLAGELTVYP 200 R+ + WE + G+ + G T+YP Sbjct 178 RFG-NGAWEASIGRPLPRGSFTIYP 201 >gi|297564091|ref|YP_003683064.1| hypothetical protein Ndas_5178 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848540|gb|ADH70558.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=201 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/153 (42%), Positives = 86/153 (57%), Gaps = 10/153 (6%) Query 50 PRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMW 109 PR + G ++ G +RG++ EG F W EH LE WLSV+ED +ELA+W Sbjct 55 PRAIKAGDMIDWGTERTWIRGTLRLSEGGFTWSEHFLEVEGGKRWLSVEEDPD-VELALW 113 Query 110 VKRTDLGLQPGGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADE 168 R DL + P G+ + ++G ++ E+G Y +EGTTGL A G +DY D S D+ Sbjct 114 TGRPDLDIIPQGKSIELEGTVYRLQEKGTGSYRSEGTTGLKASGGLDYADYES-----DD 168 Query 169 SMLLSFERWAPDMG-WEIATGKSVLAGELTVYP 200 LLSFER+ D G WE +TG V G T+YP Sbjct 169 GRLLSFERF--DHGRWEASTGTKVAPGTFTIYP 199 >gi|269125404|ref|YP_003298774.1| hypothetical protein Tcur_1151 [Thermomonospora curvata DSM 43183] gi|268310362|gb|ACY96736.1| hypothetical protein Tcur_1151 [Thermomonospora curvata DSM 43183] Length=203 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/184 (41%), Positives = 94/184 (52%), Gaps = 16/184 (8%) Query 26 RPKTPATPGGRRDPLAFDAMPQFG-----PRQLGPGAIVSHGGIDYVVRGSVTFREGPFV 80 R ++P P + P D G PR L G +V + G Y VRGSV REG + Sbjct 25 RRQSPHEPSPQPRPAPADPFASVGETAGDPRALKAGDMVEYLGTRYFVRGSVRLREGGYT 84 Query 81 WWEHLLEGGD---TPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV-IDGVTFQETERG 136 W EHLL+ T WLSV+ED LE+ W + L+PG + GV ++ E G Sbjct 85 WSEHLLDADTIEGTKVWLSVEEDPD-LEVIWWTEADVGDLRPGRPTLTFQGVEYRREEHG 143 Query 137 HAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGEL 196 A Y TEGTTGL G ++YVD A+ G LSFER+ WE TG+ V AG L Sbjct 144 TAEYRTEGTTGLGDTGRVEYVDYAAPG-----GRYLSFERFG-GGAWEAGTGERVPAGTL 197 Query 197 TVYP 200 T+YP Sbjct 198 TIYP 201 >gi|260905320|ref|ZP_05913642.1| hypothetical protein BlinB_08328 [Brevibacterium linens BL2] Length=205 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/184 (35%), Positives = 99/184 (54%), Gaps = 14/184 (7%) Query 22 VAIRRP--KTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPF 79 A RR + A P +DP A + P + G ++ G + VRG++ EG + Sbjct 27 AASRRKFEENAAAPRRPQDPFAPEQNAGGDPETIKAGDLLEFGNEKFFVRGTLRISEGGY 86 Query 80 VWWEHLLEGGDTPT--WLSVQEDDGRLELAMWVKRTDLGLQPGGQHV-IDGVTFQETERG 136 W EH + + T WL+V E+D L+++ W R +L ++P + + I+G ++ E G Sbjct 87 DWAEHFFQADQSATRLWLTV-ENDPDLQVSRWSDRPELDIEPKAKTITIEGTEYKLVEHG 145 Query 137 HAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMG-WEIATGKSVLAGE 195 A Y +EGTTGL G +DYVD S D+ LL+FER+ D G WE++TG+S+ G Sbjct 146 TASYRSEGTTGLNEKGGVDYVDYES-----DDHKLLAFERF--DHGRWEVSTGESIPVGS 198 Query 196 LTVY 199 T+Y Sbjct 199 FTIY 202 >gi|291298388|ref|YP_003509666.1| hypothetical protein Snas_0862 [Stackebrandtia nassauensis DSM 44728] gi|290567608|gb|ADD40573.1| hypothetical protein Snas_0862 [Stackebrandtia nassauensis DSM 44728] Length=210 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 75/205 (37%), Positives = 104/205 (51%), Gaps = 12/205 (5%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPAT-PGGRRDPLA-FDAMPQFG-PRQLGPGAIVS 60 +L+++AV L I I ++VV R K A +DP A D+ G PR L G I Sbjct 13 VLLILAVGLGIG-IALIVVRRREAKRKAELAAAPKDPFADLDSDILRGDPRALKAGDIFD 71 Query 61 HGGIDYVVRGSVTFREGPFVWWEHLLEGGD-TPTWLSVQEDDGRLELAMWVKRTDLGLQP 119 G VRGS+ ++G + W EHL++ G+ WLSV+ED LEL +W TD P Sbjct 72 THGETLTVRGSLRLKQGGYYWSEHLIDTGEGVKRWLSVEEDPD-LELYLWTSVTDTVPAP 130 Query 120 GGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWA 178 G + + DG F E G A YT+E TTGL G + Y D +A + LS+E + Sbjct 131 GPKTIEYDGKRFSSKESGRARYTSEATTGLGPSGNLSYHDYEAA-----DGSRLSYEDFD 185 Query 179 PDMGWEIATGKSVLAGELTVYPAPP 203 E+A G +L E+T+YP P Sbjct 186 DTGRSEVALGLRILRNEITIYPQSP 210 >gi|343925475|ref|ZP_08764994.1| hypothetical protein GOALK_046_00130 [Gordonia alkanivorans NBRC 16433] gi|343764567|dbj|GAA11920.1| hypothetical protein GOALK_046_00130 [Gordonia alkanivorans NBRC 16433] Length=211 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/211 (35%), Positives = 107/211 (51%), Gaps = 20/211 (9%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRR-------DPLAF-DAMPQFG-PRQLG 54 L++V+A+ IA +V+ R A R DP + D +G PRQL Sbjct 5 LIIVVALLAIIAVVVIFSYLGNRKARQAEADALRNRTYRPGDPFSSADDDSVYGDPRQLK 64 Query 55 PGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGG-DTPTWLSVQEDDGRLELAMWVKRT 113 PG +V G Y VRG+V + +VW E+ L+ G T W+SV EDD LE+ +W + + Sbjct 65 PGDLVELRGETYAVRGTVRLTQDGYVWTENFLDTGLGTKAWISV-EDDPDLEVVLWHELS 123 Query 114 DLGLQPGGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLL 172 + ++PG V +DG + E G A +T+ GTTG+ A G M Y D Q DE L Sbjct 124 GVVVEPGPDTVEVDGRRYHSEEAGSARFTSAGTTGVAASGRMAYHDY----QAGDER--L 177 Query 173 SFERWAPDMGWEIATGKSVLAGELTVYPAPP 203 SFE + GWE A G+ + + ++P+ P Sbjct 178 SFEDYGS--GWECARGELLTRADYRIFPSNP 206 >gi|238062034|ref|ZP_04606743.1| hypothetical protein MCAG_03000 [Micromonospora sp. ATCC 39149] gi|237883845|gb|EEP72673.1| hypothetical protein MCAG_03000 [Micromonospora sp. ATCC 39149] Length=210 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/153 (40%), Positives = 83/153 (55%), Gaps = 9/153 (5%) Query 50 PRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLL-EGGDTPTWLSVQEDDGRLELAM 108 PR+LGPG IV G Y VRGS+ REG + W EHLL + G WLSV+ED + + + Sbjct 57 PRRLGPGDIVEIRGTSYAVRGSMLLREGSWTWSEHLLDDAGGGQLWLSVEEDPD-VVMVL 115 Query 109 WVKRTDLGLQPGGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGAD 167 W L L PG + +DG + E GHA +T GTTGL G M Y D G Sbjct 116 WTTDPALTLTPGAASIDLDGHRYTSREAGHARFTATGTTGLDPSGAMRYHDYRGPG---- 171 Query 168 ESMLLSFERWAPDMGWEIATGKSVLAGELTVYP 200 ++ LSFE + + WE+A G+ + ++ +YP Sbjct 172 -TLRLSFEAYG-NAAWEVARGEELHRSDVMIYP 202 >gi|291006986|ref|ZP_06564959.1| hypothetical protein SeryN2_20903 [Saccharopolyspora erythraea NRRL 2338] Length=206 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/200 (37%), Positives = 98/200 (49%), Gaps = 12/200 (6%) Query 5 LVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQF--GPRQLGPGAIVSHG 62 +VV+ +A+ A VV +V RR RDP PR L G IV Sbjct 4 IVVVILAIMAVAAVVYLVYTRRGGGDQRAAAPRDPFHTGDEDSLRGDPRALKAGDIVEIR 63 Query 63 GIDYVVRGSVTFREGPFVWWEHLLEGGDT-PTWLSVQEDDGRLELAMWVKRTDLGLQPGG 121 G Y VRGS+ EG + W EHLL+ WLSV+ED L LA W+ D G +PG Sbjct 64 GHSYTVRGSLRLSEGGWKWSEHLLDDAKGGQVWLSVEEDP-DLVLAQWLPAADAG-EPGA 121 Query 122 QHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPD 180 + G T++ E G A + +E TTGL G + Y D A + LLSFER+ D Sbjct 122 STIEFGGRTYRSDESGSASFRSEATTGLDEQGTVGYHDYE-----ASDGSLLSFERYG-D 175 Query 181 MGWEIATGKSVLAGELTVYP 200 GWE +TG+ + ++ +YP Sbjct 176 AGWEASTGEQLSRYDVLIYP 195 >gi|72162637|ref|YP_290294.1| hypothetical protein Tfu_2238 [Thermobifida fusca YX] gi|71916369|gb|AAZ56271.1| conserved hypothetical protein [Thermobifida fusca YX] Length=199 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 68/168 (41%), Positives = 91/168 (55%), Gaps = 13/168 (7%) Query 37 RDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGGDT--PTW 94 RDP A D+ PQ PR + G ++ G VRG++ EG + W EH ++ G T W Sbjct 38 RDPFA-DSGPQGDPRAIKVGDMLDIGIERVWVRGTLRLSEGGWQWAEHFVDEGGTGQRRW 96 Query 95 LSVQEDDGRLELAMWVKRTDLGLQPG-GQHVIDGVTFQETERGHAGYTTEGTTGLPAGGE 153 LSV+ED + + +W R DL + PG +DGVT++ ERG A Y +EGTTGL A G Sbjct 97 LSVEEDPD-VRMVLWTSRPDLDVVPGPATLTVDGVTYRLVERGTASYRSEGTTGLRASGG 155 Query 154 MDYVDCASAGQGADESMLLSFERWAPDMG-WEIATGKSVLAGELTVYP 200 MDY D A L+FER+ D G WE + G + +TVYP Sbjct 156 MDYADYQ-----APSGERLAFERF--DHGSWEASVGTELTPATVTVYP 196 >gi|159035794|ref|YP_001535047.1| hypothetical protein Sare_0121 [Salinispora arenicola CNS-205] gi|157914629|gb|ABV96056.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=208 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/186 (40%), Positives = 95/186 (52%), Gaps = 15/186 (8%) Query 28 KTPATPGGRR---DPLA-FDAMPQFG-PRQLGPGAIVS-HGGIDYVVRGSVTFREGPFVW 81 +T P G R DPL DA G PR+L PG +V GG+ Y VRGSV EG + W Sbjct 30 RTRRRPTGERVAGDPLRDRDADALRGDPRRLKPGDLVEVRGGVTYAVRGSVRLVEGAWSW 89 Query 82 WEHLLEGGD-TPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV-IDGVTFQETERGHAG 139 EHLL+ D WLSV+ED LEL +W + PG + G ++ E G A Sbjct 90 TEHLLDDADGVRRWLSVEEDP-ELELVLWAAEPGTTITPGAPTIDFAGRRYRWNESGRAR 148 Query 140 YTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVY 199 YT GTTGL G + Y D ++G LSFE + D GWE+A G+ + E+ +Y Sbjct 149 YTAVGTTGLDPNGTLRYHDYQASG-----GARLSFEAYG-DAGWEVARGERLHRSEVMIY 202 Query 200 PAPPVS 205 P V+ Sbjct 203 PQGEVA 208 >gi|134097073|ref|YP_001102734.1| hypothetical protein SACE_0460 [Saccharopolyspora erythraea NRRL 2338] gi|133909696|emb|CAL99808.1| hypothetical protein SACE_0460 [Saccharopolyspora erythraea NRRL 2338] Length=209 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/198 (38%), Positives = 97/198 (49%), Gaps = 23/198 (11%) Query 12 LFIAAIVVLVVAIR-----RPKTPATP--GGRRDPLAFDAMPQFGPRQLGPGAIVSHGGI 64 + +AA+V LV R R P P G D L D PR L G IV G Sbjct 15 MAVAAVVYLVYTRRGGGDQRAAAPRDPFHTGDEDSLRGD------PRALKAGDIVEIRGH 68 Query 65 DYVVRGSVTFREGPFVWWEHLLEGGDT-PTWLSVQEDDGRLELAMWVKRTDLGLQPGGQH 123 Y VRGS+ EG + W EHLL+ WLSV+ED L LA W+ D G +PG Sbjct 69 SYTVRGSLRLSEGGWKWSEHLLDDAKGGQVWLSVEEDP-DLVLAQWLPAADAG-EPGAST 126 Query 124 V-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMG 182 + G T++ E G A + +E TTGL G + Y D A + LLSFER+ D G Sbjct 127 IEFGGRTYRSDESGSASFRSEATTGLDEQGTVGYHDYE-----ASDGSLLSFERYG-DAG 180 Query 183 WEIATGKSVLAGELTVYP 200 WE +TG+ + ++ +YP Sbjct 181 WEASTGEQLSRYDVLIYP 198 >gi|262200712|ref|YP_003271920.1| hypothetical protein Gbro_0705 [Gordonia bronchialis DSM 43247] gi|262084059|gb|ACY20027.1| hypothetical protein Gbro_0705 [Gordonia bronchialis DSM 43247] Length=211 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/215 (34%), Positives = 102/215 (48%), Gaps = 27/215 (12%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPAT-----------PGGRRDPL--AFDAMPQFGP 50 LLV+I L I A+VV+ + + K + PG DP A D P Sbjct 4 LLVIIVALLAIIAVVVIFNFLEKRKLRQSEEEALRNRTYRPG---DPFSSADDDAVYGNP 60 Query 51 RQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLLEGG-DTPTWLSVQEDDGRLELAMW 109 R L P +V G Y VRG++ +G F W E+ ++ G W+SV EDD LE+ +W Sbjct 61 RNLKPSDLVEIRGETYAVRGTLRLTQGGFTWTENFIDTGLGEKAWISV-EDDPDLEVVLW 119 Query 110 VKRTDLGLQPGGQHV-IDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADE 168 + + + PG V ++G + E G A +T+ GTTGL G M Y D + + Sbjct 120 RELKGVTVTPGPDAVELEGRRYVFDEAGSATFTSAGTTGLATTGSMRYHDYEAGTE---- 175 Query 169 SMLLSFERWAPDMGWEIATGKSVLAGELTVYPAPP 203 LSFE + GWE A G+ + GE VYP+ P Sbjct 176 --RLSFEDFGS--GWECARGEVLTTGEYRVYPSNP 206 >gi|302864675|ref|YP_003833312.1| hypothetical protein Micau_0167 [Micromonospora aurantiaca ATCC 27029] gi|302567534|gb|ADL43736.1| hypothetical protein Micau_0167 [Micromonospora aurantiaca ATCC 27029] Length=227 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/177 (38%), Positives = 85/177 (49%), Gaps = 10/177 (5%) Query 26 RPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHL 85 RPKT A PG DA+ + PR L PG IV + Y VRGSV EG + W EHL Sbjct 51 RPKTKAAPGDPFRDRDADAL-RGDPRALKPGDIVEIRAVPYTVRGSVHLVEGGWSWAEHL 109 Query 86 L-EGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV-IDGVTFQETERGHAGYTTE 143 L + G WLSV E D LE+ +W + PG + I G + E G A YT Sbjct 110 LDDAGGVKRWLSV-EADPDLEMVLWTSEPGATVTPGAPTLEIAGRRYNWDESGQARYTAT 168 Query 144 GTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYP 200 TGL G M Y D + G LSFE + + GWE+ G+ + E+ +YP Sbjct 169 EGTGLDPNGTMRYYDYQAPG-----GARLSFEAYG-EAGWEVNLGEELRRAEVMIYP 219 >gi|315500968|ref|YP_004079855.1| hypothetical protein ML5_0151 [Micromonospora sp. L5] gi|315407587|gb|ADU05704.1| hypothetical protein ML5_0151 [Micromonospora sp. L5] Length=212 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/176 (39%), Positives = 84/176 (48%), Gaps = 10/176 (5%) Query 27 PKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVWWEHLL 86 PKT A PG DA+ + PR L PG IV + Y VRGSV EG + W EHLL Sbjct 37 PKTKAAPGDPFRDRDADAL-RGDPRALKPGDIVEIRSVPYTVRGSVHLVEGGWSWAEHLL 95 Query 87 -EGGDTPTWLSVQEDDGRLELAMWVKRTDLGLQPGGQHV-IDGVTFQETERGHAGYTTEG 144 + G WLSV E D LEL +W + PG + I G + E G A YT Sbjct 96 DDAGGVKRWLSV-ESDPDLELVLWTSEPGATVTPGAPTLEIAGRRYNWDESGQARYTATE 154 Query 145 TTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELTVYP 200 TGL G M Y D + G LSFE + + GWE+ G+ + E+ +YP Sbjct 155 GTGLDPHGTMRYYDYQAPG-----GARLSFEAYG-EAGWEVNLGEELRRAEVMIYP 204 >gi|326328862|ref|ZP_08195196.1| putative secreted or membrane protein [Nocardioidaceae bacterium Broad-1] gi|325953347|gb|EGD45353.1| putative secreted or membrane protein [Nocardioidaceae bacterium Broad-1] Length=205 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/184 (31%), Positives = 90/184 (49%), Gaps = 20/184 (10%) Query 28 KTPATPGGRRDPLAF------DAMPQFGPRQLGPGAIVSHGGIDYVVRGSVTFREGPFVW 81 ++ P +R+P F A Q RQL G +V + G ++ VRG + F E + W Sbjct 22 RSRQQPTAQREPDDFIGDQHKHASDQL--RQLRNGDVVEYLGHNWFVRGRIDFDEDGYRW 79 Query 82 WEHLLEGGDTPTWLSVQEDDGRLELAMW----VKRTDLGLQPGGQHVIDGVTFQETERGH 137 EH+++ + WLS+ EDD E+++W + + G ++ GV ++ E+G Sbjct 80 TEHMIDDAEGKKWLSI-EDDESFEVSLWHAIPLGDIEQGTVGDRDVIVGGVAYRLQEKGS 138 Query 138 AGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDMGWEIATGKSVLAGELT 197 A +T G TG G +Y D S + LL FE+W + WE + G+ + ELT Sbjct 139 AAFTATGATGTAPSGTAEYADYKSV-----DGKLLGFEKWGSN--WEPSLGEVLQPFELT 191 Query 198 VYPA 201 VYP+ Sbjct 192 VYPS 195 >gi|254410997|ref|ZP_05024775.1| hypothetical protein MC7420_475 [Microcoleus chthonoplastes PCC 7420] gi|196182352|gb|EDX77338.1| hypothetical protein MC7420_475 [Microcoleus chthonoplastes PCC 7420] Length=196 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/199 (32%), Positives = 95/199 (48%), Gaps = 15/199 (7%) Query 4 LLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHGG 63 + V I + + IA VVL+V +R + G R L + F L G IV + G Sbjct 2 VFVWIGIIVIIATAVVLLVLQQRGQLSGL--GERGRLPLEERTVF---TLEVGDIVQYMG 56 Query 64 IDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMW--VKRTDLGLQPGG 121 D+VV G +T+ G + W+E+LL+ G+ WLSV EDD R+E+A+ ++ ++ +P Sbjct 57 TDWVVEGKLTYNVGDYAWYEYLLQDGERICWLSVDEDD-RVEVALLEPTQQLEMSGEPPK 115 Query 122 QHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDM 181 Q G ++ E G A T GTT Y D A + +LS E W D+ Sbjct 116 QLTFGGEIYRCVESGVADMTRTGTTLHRTAERCRYFDYEGAN-----NKVLSIEEWDGDI 170 Query 182 GWEIATGKSVLAGELTVYP 200 E+ G+ + LT+ P Sbjct 171 --EVTVGERINPRMLTLLP 187 >gi|158334895|ref|YP_001516067.1| hypothetical protein AM1_1732 [Acaryochloris marina MBIC11017] gi|158305136|gb|ABW26753.1| hypothetical protein AM1_1732 [Acaryochloris marina MBIC11017] Length=197 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/199 (30%), Positives = 92/199 (47%), Gaps = 26/199 (13%) Query 12 LFIAAIVVL--VVAIRRPKTPATPGGRRDPLAFDAMPQFGPR------QLGPGAIVSHGG 63 LFI + VL V+ +R+ + P F + PQ P L G IV H G Sbjct 6 LFIIIMGVLGVVIYMRQQSGKSLP--------FASQPQALPSLERTVFTLEVGDIVQHMG 57 Query 64 IDYVVRGSVTFREGPFVWWEHLLEGGDTPTWLSVQEDDGRLELAMWVKRT--DLGLQPGG 121 D++V G + + + + W E+LL+ G+ WLSV+EDD +E+A+ T ++G P Sbjct 58 TDWIVEGKLVYDDQGYSWLEYLLQDGNRRQWLSVEEDD-VVEVALLEVTTALEVGTNPPP 116 Query 122 QHVIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLSFERWAPDM 181 + T++ G A T +GTT Y D QG ++ +LS E W D+ Sbjct 117 ELTFANETYRHKGSGMAQMTRKGTTLNRNAERCQYFDY----QGPNDK-ILSIENWDGDI 171 Query 182 GWEIATGKSVLAGELTVYP 200 E+ G+ + LT+ P Sbjct 172 --EVTIGQKIHPSMLTLLP 188 >gi|296270984|ref|YP_003653616.1| hypothetical protein Tbis_3026 [Thermobispora bispora DSM 43833] gi|296093771|gb|ADG89723.1| hypothetical protein Tbis_3026 [Thermobispora bispora DSM 43833] Length=216 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/208 (30%), Positives = 87/208 (42%), Gaps = 17/208 (8%) Query 3 NLLVVIAVALFIAAIVVLVVAIRRPKTPATPGGRRDPLAFDAMPQFGPRQLGPGAIVSHG 62 L+VV+ L IA+I + A PK P PR + G V Sbjct 12 TLIVVLGAFLMIASIGRSLAAP--PKPSGKPAAPGAAAPAGEPGYLDPRTIRVGDTVGVQ 69 Query 63 GIDYVVRGSVTFREGPFVWWEHLLEGGDTPTW-LSVQEDDG-------RLELAMWVKRTD 114 G Y G++T W E+ LE D L+V+E G L + +W Sbjct 70 GTRYRCIGALTVTWQGENWTEYFLEDADRRVRSLTVEERRGGDGGDVSHLAVILWTPIPT 129 Query 115 LGLQPGGQH-VIDGVTFQETERGHAGYTTEGTTGLPAGGEMDYVDCASAGQGADESMLLS 173 G+ P + ++DGV F ERG A + +EG TG P G +D+ D SA + +LS Sbjct 130 EGMIPAKRMLIVDGVEFHPVERGTAAFRSEGITGFPDRGLLDFADYRSA-----DGRMLS 184 Query 174 FERWAPDMGWEIATGKSVLAGELTVYPA 201 F+R A WE + + G +TV A Sbjct 185 FQR-AQGGRWEACYAQPLPPGTITVERA 211 Lambda K H 0.319 0.139 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 233186096862 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40