BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2598
Length=164
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609735|ref|NP_217114.1| hypothetical protein Rv2598 [Mycoba... 325 2e-87
gi|289448248|ref|ZP_06437992.1| conserved hypothetical protein [... 324 3e-87
gi|289570769|ref|ZP_06450996.1| conserved hypothetical protein [... 322 2e-86
gi|15842137|ref|NP_337174.1| hypothetical protein MT2673.1 [Myco... 306 9e-82
gi|339295475|gb|AEJ47586.1| hypothetical protein CCDC5079_2396 [... 288 2e-76
gi|342858577|ref|ZP_08715232.1| hypothetical protein MCOL_06866 ... 221 4e-56
gi|118617337|ref|YP_905669.1| hypothetical protein MUL_1712 [Myc... 207 5e-52
gi|118463742|ref|YP_882659.1| hypothetical protein MAV_3477 [Myc... 206 1e-51
gi|183982121|ref|YP_001850412.1| hypothetical protein MMAR_2107 ... 205 2e-51
gi|41407132|ref|NP_959968.1| hypothetical protein MAP1034c [Myco... 201 3e-50
gi|296170848|ref|ZP_06852409.1| conserved hypothetical protein [... 199 1e-49
gi|240173170|ref|ZP_04751828.1| hypothetical protein MkanA1_2790... 194 3e-48
gi|126434453|ref|YP_001070144.1| hypothetical protein Mjls_1865 ... 181 3e-44
gi|108798853|ref|YP_639050.1| hypothetical protein Mmcs_1885 [My... 181 4e-44
gi|254775926|ref|ZP_05217442.1| hypothetical protein MaviaA2_148... 152 2e-35
gi|111019308|ref|YP_702280.1| hypothetical protein RHA1_ro02316 ... 135 2e-30
gi|226308710|ref|YP_002768670.1| hypothetical protein RER_52230 ... 124 4e-27
gi|229489176|ref|ZP_04383042.1| conserved hypothetical protein [... 124 7e-27
gi|325677004|ref|ZP_08156675.1| hypothetical protein HMPREF0724_... 123 1e-26
gi|226361448|ref|YP_002779226.1| hypothetical protein ROP_20340 ... 122 1e-26
gi|312140249|ref|YP_004007585.1| hypothetical protein REQ_28870 ... 118 2e-25
gi|158316456|ref|YP_001508964.1| hypothetical protein Franean1_4... 116 1e-24
gi|319949178|ref|ZP_08023267.1| hypothetical protein ES5_07192 [... 96.3 1e-18
gi|254821995|ref|ZP_05226996.1| hypothetical protein MintA_18827... 85.9 2e-15
gi|262200711|ref|YP_003271919.1| hypothetical protein Gbro_0704 ... 84.0 6e-15
gi|343925476|ref|ZP_08764995.1| hypothetical protein GOALK_046_0... 82.8 1e-14
gi|225020606|ref|ZP_03709798.1| hypothetical protein CORMATOL_00... 80.1 1e-13
gi|19553898|ref|NP_601900.1| hypothetical protein NCgl2611 [Cory... 79.3 2e-13
gi|25029106|ref|NP_739160.1| hypothetical protein CE2550 [Coryne... 78.6 3e-13
gi|305679854|ref|ZP_07402664.1| conserved hypothetical protein [... 77.8 5e-13
gi|227506039|ref|ZP_03936088.1| conserved hypothetical protein [... 76.6 1e-12
gi|213965165|ref|ZP_03393363.1| conserved hypothetical protein [... 72.8 2e-11
gi|336324735|ref|YP_004604701.1| hypothetical protein CRES_0174 ... 72.4 2e-11
gi|297195802|ref|ZP_06913200.1| conserved hypothetical protein [... 65.1 3e-09
gi|72162636|ref|YP_290293.1| hypothetical protein Tfu_2237 [Ther... 64.7 5e-09
gi|326328863|ref|ZP_08195197.1| LigA [Nocardioidaceae bacterium ... 62.8 2e-08
gi|159035795|ref|YP_001535048.1| hypothetical protein Sare_0122 ... 60.1 9e-08
gi|291452454|ref|ZP_06591844.1| conserved hypothetical protein [... 57.4 6e-07
gi|295837958|ref|ZP_06824891.1| conserved hypothetical protein [... 57.4 8e-07
gi|320009916|gb|ADW04766.1| hypothetical protein Sfla_3345 [Stre... 57.0 1e-06
gi|302520226|ref|ZP_07272568.1| conserved hypothetical protein [... 55.5 2e-06
gi|315500969|ref|YP_004079856.1| hypothetical protein ML5_0152 [... 55.5 3e-06
gi|21220922|ref|NP_626701.1| hypothetical protein SCO2458 [Strep... 55.5 3e-06
gi|302559496|ref|ZP_07311838.1| conserved hypothetical protein [... 55.1 3e-06
gi|318062143|ref|ZP_07980864.1| hypothetical protein SSA3_29677 ... 55.1 3e-06
gi|328883467|emb|CCA56706.1| hypothetical protein SVEN_3420 [Str... 54.7 4e-06
gi|297193116|ref|ZP_06910514.1| conserved hypothetical protein [... 54.3 5e-06
gi|302543738|ref|ZP_07296080.1| conserved hypothetical protein [... 54.3 6e-06
gi|182437216|ref|YP_001824935.1| hypothetical protein SGR_3423 [... 54.3 6e-06
gi|256397509|ref|YP_003119073.1| hypothetical protein Caci_8409 ... 53.9 7e-06
>gi|15609735|ref|NP_217114.1| hypothetical protein Rv2598 [Mycobacterium tuberculosis H37Rv]
gi|31793782|ref|NP_856275.1| hypothetical protein Mb2629 [Mycobacterium bovis AF2122/97]
gi|121638483|ref|YP_978707.1| hypothetical protein BCG_2621 [Mycobacterium bovis BCG str. Pasteur
1173P2]
74 more sequence titles
Length=164
Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/164 (99%), Positives = 164/164 (100%), Gaps = 0/164 (0%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
+PLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF
Sbjct 1 MPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF
Sbjct 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP
Sbjct 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
>gi|289448248|ref|ZP_06437992.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289421206|gb|EFD18407.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=164
Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/164 (99%), Positives = 164/164 (100%), Gaps = 0/164 (0%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
+PLHQLAIAPVDVSGALLGLVLNAPAPRPLATH+LAHTDGSALQLGVLGASHVVTVEGRF
Sbjct 1 MPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHQLAHTDGSALQLGVLGASHVVTVEGRF 60
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF
Sbjct 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP
Sbjct 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
>gi|289570769|ref|ZP_06450996.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544523|gb|EFD48171.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=164
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/164 (99%), Positives = 163/164 (99%), Gaps = 0/164 (0%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
+PLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF
Sbjct 1 MPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
CEEVSCVARSRGGDL ESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF
Sbjct 61 CEEVSCVARSRGGDLLESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP
Sbjct 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
>gi|15842137|ref|NP_337174.1| hypothetical protein MT2673.1 [Mycobacterium tuberculosis CDC1551]
gi|13882422|gb|AAK46988.1| hypothetical protein MT2673.1 [Mycobacterium tuberculosis CDC1551]
Length=154
Score = 306 bits (783), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 11 VDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARS 70
+DVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARS
Sbjct 1 MDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARS 60
Query 71 RGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTAL 130
RGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTAL
Sbjct 61 RGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTAL 120
Query 131 AAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
AAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP
Sbjct 121 AAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 154
>gi|339295475|gb|AEJ47586.1| hypothetical protein CCDC5079_2396 [Mycobacterium tuberculosis
CCDC5079]
gi|339299094|gb|AEJ51204.1| hypothetical protein CCDC5180_2367 [Mycobacterium tuberculosis
CCDC5180]
Length=144
Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/144 (99%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 21 VLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARSRGGDLPESTH 80
+LNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARSRGGDLPESTH
Sbjct 1 MLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARSRGGDLPESTH 60
Query 81 APGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWR 140
APGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWR
Sbjct 61 APGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWR 120
Query 141 WRTWHLYPSASGGTVVHTTSRWRP 164
WRTWHLYPSASGGTVVHTTSRWRP
Sbjct 121 WRTWHLYPSASGGTVVHTTSRWRP 144
>gi|342858577|ref|ZP_08715232.1| hypothetical protein MCOL_06866 [Mycobacterium colombiense CECT
3035]
gi|342134281|gb|EGT87461.1| hypothetical protein MCOL_06866 [Mycobacterium colombiense CECT
3035]
Length=161
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/161 (72%), Positives = 123/161 (77%), Gaps = 4/161 (2%)
Query 8 IAPVDVSGALLGLVLNAPAPRPLATHRLAHTDG-SALQLGVLGASHVVTVEGRFCEEVSC 66
+ P DVSG LGL LNAP P PLA+ RL H DG +AL LGVLGASHVV VE F EE+SC
Sbjct 1 MTPADVSGERLGLALNAPVPAPLASCRLDHPDGGAALLLGVLGASHVVAVEQAFSEEISC 60
Query 67 VARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAA 126
ARS G DLP T APGY LQSHT+THDEA+FRRLAR LR RC GWLGG FPGDDAA
Sbjct 61 TARSLGADLPARTEAPGYRLQSHTDTHDEASFRRLARDLRGRCAHRAGWLGGTFPGDDAA 120
Query 127 LTALAAEPDGTGWRWRTWHLYPS---ASGGTVVHTTSRWRP 164
LT LAAEPDG GWRW+TWHLYP +GGTVVHT SRWRP
Sbjct 121 LTVLAAEPDGAGWRWQTWHLYPGRPPGNGGTVVHTASRWRP 161
>gi|118617337|ref|YP_905669.1| hypothetical protein MUL_1712 [Mycobacterium ulcerans Agy99]
gi|118569447|gb|ABL04198.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=170
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/170 (69%), Positives = 129/170 (76%), Gaps = 6/170 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTV---E 57
+PLHQLA+ PVDVSGA LGL LNAPAP PLAT R+ H DG L LGVLGASHV+TV +
Sbjct 1 MPLHQLAVVPVDVSGARLGLALNAPAPPPLATCRMDHPDGGTLLLGVLGASHVITVAHRD 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
G F E+VSC G LPE T APGY LQS ETHDE++FR LA LR+RC+R GWLG
Sbjct 61 GDFSEQVSCAFGGHGESLPERTEAPGYRLQSRIETHDESSFRSLAHDLRQRCSRDNGWLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLY---PSASGGTVVHTTSRWRP 164
GVFPGD+AALTAL+AEP+G GWRW TWHLY P SGGTVVHTTS W P
Sbjct 121 GVFPGDEAALTALSAEPEGKGWRWHTWHLYPLHPGGSGGTVVHTTSWWHP 170
>gi|118463742|ref|YP_882659.1| hypothetical protein MAV_3477 [Mycobacterium avium 104]
gi|118165029|gb|ABK65926.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=183
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/167 (69%), Positives = 123/167 (74%), Gaps = 3/167 (1%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
VPLHQLA+ P DVSG LGL LNAP P PL +HRL H DG AL LGVLGASHVV VE F
Sbjct 17 VPLHQLAVTPADVSGEKLGLALNAPVPAPLVSHRLDHPDGGALLLGVLGASHVVAVEHAF 76
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
EE+SC ARS G DLPE APGY L+S ++ DEA+FRRLA LR+RC R GWLGG F
Sbjct 77 SEEISCTARSFGADLPERAEAPGYRLRSRSDARDEASFRRLADDLRDRCARRPGWLGGSF 136
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLY---PSASGGTVVHTTSRWRP 164
PGD AALT LAA PDG GWRWRTWHLY P+ GGTVV T SRW P
Sbjct 137 PGDGAALTVLAARPDGAGWRWRTWHLYPDRPAGRGGTVVRTASRWHP 183
>gi|183982121|ref|YP_001850412.1| hypothetical protein MMAR_2107 [Mycobacterium marinum M]
gi|183175447|gb|ACC40557.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=170
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/170 (68%), Positives = 128/170 (76%), Gaps = 6/170 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTV---E 57
+PLHQLA+ P DVSGA LGL LNAPAP PLAT R+ H DG L LGVLGASHV+TV +
Sbjct 1 MPLHQLAVVPADVSGARLGLALNAPAPPPLATCRMDHPDGGTLLLGVLGASHVITVAHRD 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
G F E+VSC G LPE T APGY LQS ETHDE++FR LA LR+RC+R GWLG
Sbjct 61 GDFSEQVSCAVGGHGESLPERTEAPGYRLQSRIETHDESSFRSLAHDLRQRCSRDNGWLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLY---PSASGGTVVHTTSRWRP 164
GVFPGD+AALTAL+AEP+G GWRW TWHLY P SGGTVVHTTS W P
Sbjct 121 GVFPGDEAALTALSAEPEGRGWRWHTWHLYPLHPGGSGGTVVHTTSWWHP 170
>gi|41407132|ref|NP_959968.1| hypothetical protein MAP1034c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395483|gb|AAS03351.1| hypothetical protein MAP_1034c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461480|gb|EGO40349.1| Protein of unknown function DUF2617 [Mycobacterium avium subsp.
paratuberculosis S397]
Length=167
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/167 (68%), Positives = 122/167 (74%), Gaps = 3/167 (1%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
+PLHQLA+ P DVSG LGL LNAP P PL +HRL H G AL LGVLGASHVV VE F
Sbjct 1 MPLHQLAVTPADVSGEKLGLALNAPVPAPLVSHRLDHPGGGALLLGVLGASHVVAVEHAF 60
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
EE+SC ARS G DLPE APGY L+S ++ DEA+FRRLA LR+RC R GWLGG F
Sbjct 61 SEEISCTARSFGADLPERAEAPGYRLRSRSDARDEASFRRLADDLRDRCARRPGWLGGSF 120
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLY---PSASGGTVVHTTSRWRP 164
PGD AALT LAA PDG GWRWRTWHLY P+ GGTVV T SRW P
Sbjct 121 PGDGAALTVLAARPDGAGWRWRTWHLYPDLPAGRGGTVVRTASRWHP 167
>gi|296170848|ref|ZP_06852409.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894504|gb|EFG74245.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=176
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/176 (69%), Positives = 129/176 (74%), Gaps = 12/176 (6%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--- 57
+PLHQLA+AP DVSG LGL LNAPAP PLAT L H DG AL LGVLGASHVVTVE
Sbjct 1 MPLHQLAVAPSDVSGRRLGLALNAPAPPPLATCLLHHPDGGALSLGVLGASHVVTVEHAA 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
GRF EEVSC AR GG LPE T A GY L+S +T+DE +FRR+AR LRERC R GWLG
Sbjct 61 GRFSEEVSCTARGFGGALPERTAADGYSLESWIDTYDEGSFRRMARDLRERCARENGWLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSAS---------GGTVVHTTSRWRP 164
G FPGDDAALTALAAEPDG GW WRTWHLYP + GG VVHT SRW P
Sbjct 121 GSFPGDDAALTALAAEPDGPGWHWRTWHLYPRNAFGSGGSGGSGGEVVHTASRWHP 176
>gi|240173170|ref|ZP_04751828.1| hypothetical protein MkanA1_27906 [Mycobacterium kansasii ATCC
12478]
Length=167
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/167 (68%), Positives = 132/167 (80%), Gaps = 3/167 (1%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--- 57
+PLHQLA+AP DVSGA L L +NAP PRPLA+HR+ H G L LGVLGASHV+TV
Sbjct 1 MPLHQLAVAPADVSGARLRLAINAPPPRPLASHRMDHPHGGTLLLGVLGASHVITVHHGG 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
F E++SC AR++G LP T APGY L+S ++THDE+ FRRLA LR RC R GWLG
Sbjct 61 TAFSEQISCSARNQGSSLPAHTEAPGYRLESRSDTHDESTFRRLAHELRRRCARDDGWLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G+FPGDDAALTALAAEPDGTGWRW+TWHLYP+ SGG+VV+T SRW+P
Sbjct 121 GMFPGDDAALTALAAEPDGTGWRWQTWHLYPTGSGGSVVYTASRWQP 167
>gi|126434453|ref|YP_001070144.1| hypothetical protein Mjls_1865 [Mycobacterium sp. JLS]
gi|126234253|gb|ABN97653.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=170
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 109/170 (65%), Gaps = 6/170 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--- 57
+P HQLA+AP DV GA LGL LNAPAP PLA RL+H G AL LGVLGASHVVTVE
Sbjct 1 MPFHQLAVAPADVDGAALGLALNAPAPVPLAGIRLSHRRGGALVLGVLGASHVVTVEHPA 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
G F EEVSC A + G LP PGY +S T F LA+ L ERC LG
Sbjct 61 GGFSEEVSCSAHAYGRTLPGRFEGPGYRFESETTVCAATEFETLAQRLHERCLTDRNSLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSA---SGGTVVHTTSRWRP 164
G FPGDDAALT L A PDG GW W+TWHLYP GGT VHTTSRW P
Sbjct 121 GRFPGDDAALTVLQARPDGPGWWWQTWHLYPGGPRVPGGTAVHTTSRWHP 170
>gi|108798853|ref|YP_639050.1| hypothetical protein Mmcs_1885 [Mycobacterium sp. MCS]
gi|119867968|ref|YP_937920.1| hypothetical protein Mkms_1931 [Mycobacterium sp. KMS]
gi|108769272|gb|ABG07994.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119694057|gb|ABL91130.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=170
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/170 (60%), Positives = 109/170 (65%), Gaps = 6/170 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--- 57
+P HQLA+AP DV GA LGL LNAPAP PLA RL+H G AL LGVLGASHVVT+E
Sbjct 1 MPFHQLAVAPADVDGAALGLALNAPAPVPLAGIRLSHRRGGALVLGVLGASHVVTIEHPA 60
Query 58 GRFCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
G F EEVSC A + G LP PGY +S T F LA+ L ERC LG
Sbjct 61 GGFSEEVSCSAHAYGRTLPGRFEGPGYRFESETTVCAATEFETLAQRLHERCLTDRNSLG 120
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSA---SGGTVVHTTSRWRP 164
G FPGDDAALT L A PDG GW W+TWHLYP GGT VHTTSRW P
Sbjct 121 GRFPGDDAALTVLQARPDGPGWWWQTWHLYPGGPRVPGGTAVHTTSRWHP 170
>gi|254775926|ref|ZP_05217442.1| hypothetical protein MaviaA2_14820 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=144
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/128 (68%), Positives = 94/128 (74%), Gaps = 0/128 (0%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRF 60
VPLHQLA+ P DVSG LGL LNAP P PL +HRL H G AL LGVLGASHVV VE F
Sbjct 17 VPLHQLAVTPADVSGEKLGLALNAPVPAPLVSHRLDHPGGGALLLGVLGASHVVAVEHAF 76
Query 61 CEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
EE+SC ARS G DLPE APGY L+S ++ DEA+FRRLA LR+RC R GWLGG F
Sbjct 77 SEEISCTARSFGADLPERAEAPGYRLRSRSDARDEASFRRLADDLRDRCARRPGWLGGSF 136
Query 121 PGDDAALT 128
PGD AALT
Sbjct 137 PGDGAALT 144
>gi|111019308|ref|YP_702280.1| hypothetical protein RHA1_ro02316 [Rhodococcus jostii RHA1]
gi|110818838|gb|ABG94122.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=167
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/168 (48%), Positives = 94/168 (56%), Gaps = 5/168 (2%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG-- 58
+ LH L I DV+ LGLV+NA P PLA + H D + L VLGASH VT
Sbjct 1 MTLHVLDIESRDVTAEALGLVVNAETPCPLAELTITHGD-DRVTLAVLGASHAVTASAAG 59
Query 59 -RFCEEVSCVA-RSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
R E+VSC A R+ G LP S A GY S T+T D + A LR + T GW+
Sbjct 60 SRITEQVSCDAVRAGGRPLPVSDSASGYRFHSTTDTVDRTHLEQTADWLRRQATEVDGWI 119
Query 117 GGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G FPGD ALTAL A D GW W+TWHLYP GG +V T SRW+P
Sbjct 120 CGAFPGDHTALTALTAAKDSGGWVWQTWHLYPGDKGGVIVKTRSRWQP 167
>gi|226308710|ref|YP_002768670.1| hypothetical protein RER_52230 [Rhodococcus erythropolis PR4]
gi|226187827|dbj|BAH35931.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=166
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/168 (45%), Positives = 94/168 (56%), Gaps = 6/168 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG-- 58
+ L++L + P DV+ + LGLVL AP+P LA + +D + L LGVLGASHVVT
Sbjct 1 MSLYRLDVEPTDVNASALGLVLGAPSPPTLAELVIETSDAT-LTLGVLGASHVVTARASG 59
Query 59 -RFCEEVSCVARSRGGD-LPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
E+VSC A + GG+ LP Y +S + D F A LRE + GW+
Sbjct 60 KELTEQVSCDALAAGGEPLPAVESTENYRFESSSLILDRVEFDSKAASLRESAGQ-DGWI 118
Query 117 GGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G FPGDD ALTAL D GW ++WHLYP G +V T SRWRP
Sbjct 119 CGSFPGDDTALTALCGVRDRQGWSGQSWHLYPGEGTGVIVKTRSRWRP 166
>gi|229489176|ref|ZP_04383042.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229324680|gb|EEN90435.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=166
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/168 (45%), Positives = 94/168 (56%), Gaps = 6/168 (3%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTV--EG 58
+ L+ L + P DV + LGLVL APAP LA + +D + L LGVLGASHVVT G
Sbjct 1 MSLYLLDVEPTDVDASALGLVLGAPAPPTLAELVIGTSDAT-LTLGVLGASHVVTAWASG 59
Query 59 R-FCEEVSCVARSRGGD-LPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
+ E+VSC A + GG+ LP Y +S + D F A L+E GW+
Sbjct 60 KELTEQVSCDALAVGGEPLPAVESTQNYRFESSSLVLDRVEFDSEAASLKESAGH-DGWI 118
Query 117 GGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G FPGDD ALTAL D GW W++WHLYP G +V T SRW+P
Sbjct 119 CGSFPGDDTALTALYGVRDRQGWSWQSWHLYPGEGTGVIVKTRSRWQP 166
>gi|325677004|ref|ZP_08156675.1| hypothetical protein HMPREF0724_14458 [Rhodococcus equi ATCC
33707]
gi|325552166|gb|EGD21857.1| hypothetical protein HMPREF0724_14458 [Rhodococcus equi ATCC
33707]
Length=167
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/168 (52%), Positives = 96/168 (58%), Gaps = 5/168 (2%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--G 58
+ +H L + P DV+ LGLVL+AP P LA L +L LGVLGASHVV E G
Sbjct 1 MSVHLLEVEPADVAADALGLVLDAPVPATLAELHLHDGLAGSLTLGVLGASHVVVAEAGG 60
Query 59 RFC-EEVSCVA-RSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
R E+VSC A RS G LPE GY S TE E FR A LRE+ + GW+
Sbjct 61 RMLTEQVSCEAVRSGGMRLPEVEERHGYRFVSRTELVPEDEFRLRAAALREQSS-GEGWV 119
Query 117 GGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G FPGD ALTAL A W WRTWHLYP GGTVV T SRWRP
Sbjct 120 CGAFPGDRDALTALTAAARAGQWHWRTWHLYPGDGGGTVVSTESRWRP 167
>gi|226361448|ref|YP_002779226.1| hypothetical protein ROP_20340 [Rhodococcus opacus B4]
gi|226239933|dbj|BAH50281.1| hypothetical protein [Rhodococcus opacus B4]
Length=174
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/175 (46%), Positives = 94/175 (54%), Gaps = 12/175 (6%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--- 57
+ LH L I DV+ LGLV+NA P PLA + + D + LGVLGASH VT
Sbjct 1 MTLHVLDIESRDVTAEALGLVVNAETPLPLAELTITYGD-DRVTLGVLGASHAVTATVAG 59
Query 58 GRFCEEVSCVA-RSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
R E+VSC A R+ G LP S A GY S T+ D A R A LR + T GW+
Sbjct 60 SRITEQVSCDAIRAGGRPLPVSDSANGYRFDSTTDVVDRAHLERTADWLRRQATEVEGWI 119
Query 117 GGVFPGDDAALTALAAEPD-GTGWRWRTWHLYP------SASGGTVVHTTSRWRP 164
G FPGD ALTAL A + GW W+TWHLYP GG +V T SRW P
Sbjct 120 CGAFPGDHTALTALTASREHAGGWVWQTWHLYPGDHLYAGDKGGVIVKTRSRWLP 174
>gi|312140249|ref|YP_004007585.1| hypothetical protein REQ_28870 [Rhodococcus equi 103S]
gi|311889588|emb|CBH48905.1| hypothetical protein REQ_28870 [Rhodococcus equi 103S]
Length=167
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/168 (52%), Positives = 96/168 (58%), Gaps = 5/168 (2%)
Query 1 VPLHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVE--G 58
+ +H L + P DV+ LGLVL+AP P LA L +L LGVLGASHVV E G
Sbjct 1 MSVHLLEVEPADVAADALGLVLDAPVPATLAELHLHDGLAGSLTLGVLGASHVVVAEAGG 60
Query 59 RFC-EEVSCVA-RSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWL 116
R E+VSC A RS G LPE GY S TE E FR A LRE+ + GW+
Sbjct 61 RMLTEQVSCEAVRSGGMRLPEVEERHGYRFVSRTELVPEDEFRLRAAALREQSS-GEGWV 119
Query 117 GGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
G FPGD ALTAL A W WRTWHLYP GGTVV T SRWRP
Sbjct 120 CGAFPGDRDALTALTAAARAGQWHWRTWHLYPGGGGGTVVSTESRWRP 167
>gi|158316456|ref|YP_001508964.1| hypothetical protein Franean1_4691 [Frankia sp. EAN1pec]
gi|158111861|gb|ABW14058.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length=168
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/164 (45%), Positives = 88/164 (54%), Gaps = 5/164 (3%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG---RFC 61
+LA+ P DV A LGL+L AP+P LA+ L H L L VLGASH V+ R
Sbjct 5 ELAVVPRDVRAASLGLLLGAPSPASLASVDL-HAPHGMLTLAVLGASHAVSASSGTRRLT 63
Query 62 EEVSCVARSRGG-DLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVF 120
EEVSC A + GG LP GY L++ T D LA LR R + WL F
Sbjct 64 EEVSCDAVAAGGCPLPSRAEQDGYTLRAQVRTVDRRELDALAASLRTRAAGRSDWLCAAF 123
Query 121 PGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
PGD+ A+TAL GW+WRTWHLYP + +V T SRW P
Sbjct 124 PGDERAVTALTGARMPRGWQWRTWHLYPGSRTHEIVTTHSRWEP 167
>gi|319949178|ref|ZP_08023267.1| hypothetical protein ES5_07192 [Dietzia cinnamea P4]
gi|319437164|gb|EFV92195.1| hypothetical protein ES5_07192 [Dietzia cinnamea P4]
Length=192
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/176 (43%), Positives = 89/176 (51%), Gaps = 17/176 (9%)
Query 3 LHQLAIAPVDVSGALLGL-VLNAPAPRPLATHRLAH-TDGSALQLGVLGASHVVT--VEG 58
+H L P DV+ A LG V AP L + L H AL+L +LGASH VT ++G
Sbjct 3 VHDLVAEPSDVAAAALGYRVGVAPERDALVSTVLEHPVHDIALRLSILGASHAVTLVIDG 62
Query 59 R--FCEEVSCVARSRGG-DLPESTHAPG----YHLQSHTETHDEAAFRRLARHLRERCTR 111
R EEVSC A + GG LP PG +HL+ TET AF L L
Sbjct 63 RDAMTEEVSCRATTAGGAPLPAEVSCPGPWGVHHLRGATETLSADAFGELVDRLTALAAT 122
Query 112 ATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSAS------GGTVVHTTSR 161
L G FPG + ALT +A P+ TGW W TWHLYP+ GG VV TTSR
Sbjct 123 EPTVLAGRFPGCEGALTVVAPTPEDTGWSWDTWHLYPTGEDSAGDGGGDVVATTSR 178
>gi|254821995|ref|ZP_05226996.1| hypothetical protein MintA_18827 [Mycobacterium intracellulare
ATCC 13950]
Length=77
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/76 (66%), Positives = 54/76 (72%), Gaps = 4/76 (5%)
Query 8 IAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGS-ALQLGVLGASHVVTVE---GRFCEE 63
+ P DVSG LGL LNAP P PLAT RL H G+ AL LGVLGASHVV VE GRF EE
Sbjct 1 MTPADVSGQRLGLALNAPVPAPLATCRLDHPCGAGALLLGVLGASHVVAVEHAAGRFSEE 60
Query 64 VSCVARSRGGDLPEST 79
+SC AR+ G DLPE T
Sbjct 61 ISCTARNLGADLPERT 76
>gi|262200711|ref|YP_003271919.1| hypothetical protein Gbro_0704 [Gordonia bronchialis DSM 43247]
gi|262084058|gb|ACY20026.1| hypothetical protein Gbro_0704 [Gordonia bronchialis DSM 43247]
Length=184
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/163 (39%), Positives = 79/163 (49%), Gaps = 11/163 (6%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG---RFC 61
++ +A D S A LG L AP +P A DG + L +LGASH V V+ R C
Sbjct 16 EIDVAYADTSAAQLGFSLEAP-EQPALAECSADFDGITISLRLLGASHQVIVDDGHQRLC 74
Query 62 EEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCT--RATGW--LG 117
E V+C+ LPES Y+ SH + + A L L R RA G L
Sbjct 75 ETVACLPEMTSA-LPESYQGSSYYFASHVDVVEADALADLVDDLGTRVADRRADGLPALL 133
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTS 160
G FPG+ A+TA+ ++ D W TWH YP A G VV TTS
Sbjct 134 GRFPGEPHAVTAIISDADAETISWHTWHTYPQA--GEVVVTTS 174
>gi|343925476|ref|ZP_08764995.1| hypothetical protein GOALK_046_00140 [Gordonia alkanivorans NBRC
16433]
gi|343764568|dbj|GAA11921.1| hypothetical protein GOALK_046_00140 [Gordonia alkanivorans NBRC
16433]
Length=181
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/163 (38%), Positives = 81/163 (50%), Gaps = 11/163 (6%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG---RFC 61
+L++A D S LG L+AP PLA DG + + +LGASH V V+ R C
Sbjct 14 RLSVAYADTSAGQLGFSLDAPLQEPLAQED-GEIDGITVSVRLLGASHQVVVDDGAQRIC 72
Query 62 EEVSCVARSRGGDLPESTHAPGYHLQSHTE--THDEAA--FRRLARHLRERCTRATGWLG 117
E V+C+ LPE+ GY S E T D+ A +L + E+ T +
Sbjct 73 ETVACLPDVTSA-LPETFQESGYLFSSRVERATDDQLAALIEQLGVRVTEQMTSGKPSVM 131
Query 118 GVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTS 160
GVFPGD A+TA+ ++ W TWH YP A G VV TTS
Sbjct 132 GVFPGDPHAVTAIISDSSSEEISWHTWHTYPQA--GEVVITTS 172
>gi|225020606|ref|ZP_03709798.1| hypothetical protein CORMATOL_00613 [Corynebacterium matruchotii
ATCC 33806]
gi|224946552|gb|EEG27761.1| hypothetical protein CORMATOL_00613 [Corynebacterium matruchotii
ATCC 33806]
Length=186
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/185 (38%), Positives = 84/185 (46%), Gaps = 34/185 (18%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRP-LATHRLAHTDGS------ALQLGVLGASHVVTVE 57
+ I DVS LGL L PAP LA D S L+L ++GASHV +
Sbjct 3 EFTIPQKDVSADALGLCLGGPAPEDQLADTVFIPADQSDDGQRLCLRLCIIGASHVAELL 62
Query 58 GR-----FCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLR---ERC 109
R EEVSC A+ GG+ P +Q T H +R A HLR E
Sbjct 63 DRENTVVLREEVSCAAQQHGGE-------PLRDVQELTMPHSHGQYRFHAEHLRYSPEGF 115
Query 110 TRA---------TGWLGGVFPGDDAA-LTALAAEPDGTGWRWRTWHLYPSASGGTVVHTT 159
T A WL G FPG+ +TAL P GW W T+HLYP+ TVVHTT
Sbjct 116 TAAATDLCAVFDDDWLVGTFPGEGKYHITALFGMPQHDGWLWDTYHLYPNDY--TVVHTT 173
Query 160 SRWRP 164
S ++P
Sbjct 174 STFQP 178
>gi|19553898|ref|NP_601900.1| hypothetical protein NCgl2611 [Corynebacterium glutamicum ATCC
13032]
gi|62391541|ref|YP_226943.1| hypothetical protein cg2993 [Corynebacterium glutamicum ATCC
13032]
gi|145296701|ref|YP_001139522.1| hypothetical protein cgR_2606 [Corynebacterium glutamicum R]
gi|21325477|dbj|BAC00099.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41326883|emb|CAF20727.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
gi|140846621|dbj|BAF55620.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344046233|gb|EGV41899.1| hypothetical protein CgS9114_00740 [Corynebacterium glutamicum
S9114]
Length=166
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/170 (38%), Positives = 79/170 (47%), Gaps = 13/170 (7%)
Query 3 LHQLAIAPVDVSGALLGLVLNAPAPRPLATHRL-AHTDGSALQLGVLGASHVVTVE---G 58
+H + P DVS LG+ N +P L + A S L V+G SHVVTVE G
Sbjct 2 IHHIDCMPTDVSAEALGVSWNGESPEVLVDKLIDASPHPSTCHLAVIGGSHVVTVETPDG 61
Query 59 RFCEEVSCVARSRGGD---LPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGW 115
RF EE+SC A+ LP+S Y LQ++ E F R A E W
Sbjct 62 RFREEISCHAQEAEDSRWPLPDSITRENYLLQTNVAVLSEEDFARAAE---EISNGDDDW 118
Query 116 LGGVFPG-DDAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
L FPG + LTAL AE W W + HLYP T+V T S ++P
Sbjct 119 LIASFPGAGEHHLTALTAEFLEDVWEWFSHHLYPEEL--TIVSTRSIYKP 166
>gi|25029106|ref|NP_739160.1| hypothetical protein CE2550 [Corynebacterium efficiens YS-314]
gi|259505896|ref|ZP_05748798.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494393|dbj|BAC19360.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166500|gb|EEW51054.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=161
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/167 (41%), Positives = 86/167 (52%), Gaps = 15/167 (8%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRPLATHRLAH-TDGSALQLGVLGASHVVTVE---GRF 60
+LA AP D+ LG+ NAP P LA + T S+L L V+G SHVVTVE GRF
Sbjct 3 RLACAPADIRAGDLGVRWNAPMPEILAEMLIDDPTTHSSLHLVVIGGSHVVTVEAPSGRF 62
Query 61 CEEVSCVARSRGGD--LPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGG 118
EE+SC AR GG+ LP + GY L++ T T F A + + G L
Sbjct 63 REEISCHAR-EGGEWPLPGAVDKQGYRLETRTRTLSPGEFAAEAADIAD-----GGGLIA 116
Query 119 VFPGD-DAALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
FPG+ + LTAL W W T HLYP + T+V T S++ P
Sbjct 117 SFPGEGEYHLTALRGACVDGVWHWWTHHLYPGEN--TIVSTRSQYHP 161
>gi|305679854|ref|ZP_07402664.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305660474|gb|EFM49971.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=186
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/185 (36%), Positives = 82/185 (45%), Gaps = 34/185 (18%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRP-LATHRLAHTDGS------ALQLGVLGASHVVTVE 57
+ I DVS LGL L PAP LA D S L+L ++GASHV +
Sbjct 3 EFTIPQKDVSADALGLCLGGPAPEDQLADTVFIPADQSDDGQHFCLRLCIIGASHVAELL 62
Query 58 GR-----FCEEVSCVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHL------- 105
R EEVSC A+ GG+ P +Q T H +R A HL
Sbjct 63 DRENTVVLREEVSCAAQQHGGE-------PLRDVQELTMPHSHGQYRFHAEHLCYSPEGF 115
Query 106 ----RERC-TRATGWLGGVFPGDDAA-LTALAAEPDGTGWRWRTWHLYPSASGGTVVHTT 159
+ C WL G FPG+ +TAL P GW W T+HLYP+ TVVHTT
Sbjct 116 TAAATDLCAVFDDDWLVGTFPGEGKYHITALFGMPQHDGWLWDTYHLYPNDY--TVVHTT 173
Query 160 SRWRP 164
S ++P
Sbjct 174 STFQP 178
>gi|227506039|ref|ZP_03936088.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227197321|gb|EEI77369.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=160
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/174 (37%), Positives = 86/174 (50%), Gaps = 26/174 (14%)
Query 3 LHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTV-EGR-- 59
+ L DVS A LGL LN P P+ L+T L +DG L+L ++GASH +V G
Sbjct 1 MEVLDCPSADVSAADLGLRLNGPRPQALSTTMLHGSDGLRLELDIIGASHTASVYRGETL 60
Query 60 -FCEEVSCVARSRGGDLPEST-HAPGYHLQSHTETHD----EAAFRRLARHLRERCTRAT 113
F EE+SC G LP++ GY L++ H A F+R++ +T
Sbjct 61 LFREEISCHCE---GPLPQAYGEVTGYELKTDVAKHGADNFAAEFQRVS---------ST 108
Query 114 GWLGGVFPGD-DAALTALA--AEPDGTGWRWRTWHLYPSASGGTVVHTTSRWRP 164
W FPG + +TAL A D G+ W T H+YP+ +V TTSRW P
Sbjct 109 DWHSAQFPGQGEYHVTALKGTAPEDCAGFEWETVHMYPAEE--LIVKTTSRWIP 160
>gi|213965165|ref|ZP_03393363.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952279|gb|EEB63663.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=179
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 76/158 (49%), Gaps = 15/158 (9%)
Query 12 DVSGALLGLVLNAPAPRPLATHRLAHTDGSA--LQLGVLGASHVVTVEGR----FCEEVS 65
D + L + + P L ++H DG+ L LGVLGASHVV V R F EE+S
Sbjct 12 DTAAEQLRIAFDGQVPDTLCEAVISHPDGTTPPLTLGVLGASHVVFVGKRENPSFTEEIS 71
Query 66 CVARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLR-ERCTRATGWLGGVFPGDD 124
C A S G L G +++ E AF + A LR E + FPG
Sbjct 72 CTA-SHGVPL----SGAGVMVKARVENLSPEAFAQRANALRREFGAGHPHSVVAEFPGSP 126
Query 125 AALTALAAEPDGTGWRWRTWHLYPSASGGTVVHTTSRW 162
ALT L+AEP G+RW TWH YP G +V T++ W
Sbjct 127 GALTVLSAEPIEQGYRWDTWHGYPP---GQLVWTSNTW 161
>gi|336324735|ref|YP_004604701.1| hypothetical protein CRES_0174 [Corynebacterium resistens DSM
45100]
gi|336100717|gb|AEI08537.1| hypothetical protein CRES_0174 [Corynebacterium resistens DSM
45100]
Length=229
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/158 (35%), Positives = 76/158 (49%), Gaps = 16/158 (10%)
Query 6 LAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSA--LQLGVLGASHVVTVEGR---- 59
L P+D+S A LG+ NAP P + + G+ L LG++G SHVVT
Sbjct 3 LNTQPLDLSSADLGVRFNAPMPPRILAESVLSAPGAQHQLHLGIIGGSHVVTFSDAHGTP 62
Query 60 -FCEEVSCVA------RSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRA 112
EE+SC A +RG + E T Y + + A F + +L+ R
Sbjct 63 LLREELSCYAVENGQRLARGVETQEDTGELNYSFAAAPKHVAAAQFDEVVEYLQRRAEHE 122
Query 113 TGWLGGVFPGDDAA-LTALAAE-PDGTGWRWRTWHLYP 148
WL G FPG++ +TALAA D + RW+TWHLYP
Sbjct 123 H-WLVGEFPGEEPGHITALAATWRDNSNVRWQTWHLYP 159
>gi|297195802|ref|ZP_06913200.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720740|gb|EDY64648.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=164
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/149 (35%), Positives = 63/149 (43%), Gaps = 5/149 (3%)
Query 5 QLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEV 64
+L +D L L PA LA L G +QL +LGASH V G E V
Sbjct 5 ELTTPYLDTDADQLSFTLGRPAREALAVRDLT-VGGLDVQLRLLGASHQV-FAGPVRETV 62
Query 65 SCVARSRGGDLPESTHAPG---YHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFP 121
+C+ GG H Y + A F +R+R A L G+FP
Sbjct 63 ACLPGVAGGLPGSEVHEFDEWHYRFTARVRHFTAAGFSEEVHRIRKRSDDAAESLHGIFP 122
Query 122 GDDAALTALAAEPDGTGWRWRTWHLYPSA 150
G A+TAL E GTG WRTWH YP +
Sbjct 123 GSPEAVTALTVERLGTGLGWRTWHTYPQS 151
>gi|72162636|ref|YP_290293.1| hypothetical protein Tfu_2237 [Thermobifida fusca YX]
gi|71916368|gb|AAZ56270.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=181
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 62/129 (49%), Gaps = 11/129 (8%)
Query 40 GSALQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLPE--STHAPG---YHLQSHTE 91
G+ ++L VLGASH V V+ RF E V+C+ GG LP + PG YH S
Sbjct 38 GARVRLCVLGASHQVVVDHGPTRFVETVACLP-DVGGGLPAEAALRVPGTARYHFTSSVH 96
Query 92 THDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSAS 151
D A F +R+R G L VFPG+ A+TAL G W TWH YP
Sbjct 97 RLDRAEFTARTTTVRDRLAEHPGALLAVFPGNPLAITALLVAGAGPVLHWYTWHAYPQT- 155
Query 152 GGTVVHTTS 160
G +V T S
Sbjct 156 -GELVTTVS 163
>gi|326328863|ref|ZP_08195197.1| LigA [Nocardioidaceae bacterium Broad-1]
gi|325953348|gb|EGD45354.1| LigA [Nocardioidaceae bacterium Broad-1]
Length=170
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/158 (36%), Positives = 70/158 (45%), Gaps = 8/158 (5%)
Query 12 DVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGR----FCEEVSCV 67
DV G L L A PLA+ + DG ++ L VLGASH V V E V+C
Sbjct 10 DVRGDTLRWTLAPVACTPLASCSVHLGDGLSVTLSVLGASHQVVVSRHDRPLLHETVAC- 68
Query 68 ARSRGGDLPESTHAPGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAAL 127
+ LP + GY L S+ D A L ER T + FPGD A+
Sbjct 69 GIAEATFLPAAHAEGGYSLGSYVAKLDPEELAERASELVERLEGRTDAVVAHFPGDPHAV 128
Query 128 TALAAEPDG-TGWRWRTWHLYPSASGGTVVHTTSRWRP 164
TALA + G W TWH YP G +V T + +RP
Sbjct 129 TALAIDELGEQQISWSTWHTYPQT--GEIVATVTSYRP 164
>gi|159035795|ref|YP_001535048.1| hypothetical protein Sare_0122 [Salinispora arenicola CNS-205]
gi|157914630|gb|ABV96057.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=168
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/168 (34%), Positives = 70/168 (42%), Gaps = 8/168 (4%)
Query 3 LHQLAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEG---R 59
L LA VD S A L L L+ L + G ++L +LGASH V +
Sbjct 2 LVTLATPYVDTSAADLSLALDGVEHPALHVLHVDLPGGVQVRLRLLGASHQVVLRAPGAA 61
Query 60 FCEEVSCVARSRGGDLPESTH--APGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLG 117
E V+C+ R DLP+ H + GY + + A R LR L
Sbjct 62 LTETVACLP-GRRPDLPDRVHDESVGYRFTATVLRPGDDALRERVAALRAGLADDPYALV 120
Query 118 GVFPGDDAALTALAAE--PDGTGWRWRTWHLYPSASGGTVVHTTSRWR 163
GVFPGD A+TALA P G WRTWH YP V T R
Sbjct 121 GVFPGDVDAVTALAVRPGPPGGALGWRTWHAYPQTRELVVTETAVALR 168
>gi|291452454|ref|ZP_06591844.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355403|gb|EFE82305.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=181
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/129 (38%), Positives = 60/129 (47%), Gaps = 10/129 (7%)
Query 40 GSALQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLP----ESTHAPGYHLQSHTET 92
G+ALQL +LGASH V +E G E V+C+ S+ LP E Y + E
Sbjct 38 GTALQLRLLGASHQVLLEQERGVCSETVACIPGSKS-PLPVGVSERVGDWEYEFSARVEV 96
Query 93 HDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASG 152
+AF A+ L L GVFPG A TAL A+ WRTWH YP
Sbjct 97 MTPSAFSGRAQELLALVADHPHGLAGVFPGSPDAFTALIAQWRDGQMHWRTWHAYPEE-- 154
Query 153 GTVVHTTSR 161
G +V T SR
Sbjct 155 GQLVVTRSR 163
>gi|295837958|ref|ZP_06824891.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826764|gb|EFG65030.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length=241
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/130 (34%), Positives = 56/130 (44%), Gaps = 8/130 (6%)
Query 41 SALQLGVLGASHVVTVEGRFCEEVSCVARSRGGDLP------ESTHAPGYHLQSHTETHD 94
+ +QL +LGASH V +E + E VA GG P E YH + E
Sbjct 39 ATVQLRLLGASHQVLLEDEYGECSETVACLPGGGAPLPVGVVEEFDGFDYHFAARVEELP 98
Query 95 EAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGT 154
AF A+ L L GVFPG A TA+ + +WRTWH YP G
Sbjct 99 PGAFAGRAQELLALVAEHPHGLAGVFPGSPDAFTAMLVQRRDGETQWRTWHAYP--EDGQ 156
Query 155 VVHTTSRWRP 164
+V T +R P
Sbjct 157 LVVTRTRLAP 166
>gi|320009916|gb|ADW04766.1| hypothetical protein Sfla_3345 [Streptomyces flavogriseus ATCC
33331]
Length=173
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/127 (36%), Positives = 56/127 (45%), Gaps = 8/127 (6%)
Query 41 SALQLGVLGASHVVTVE--GRFCEEVSCVARSRGGDLP----ESTHAPGYHLQSHTETHD 94
+ +QL +LGASH V +E GR C E LP ES Y + ET
Sbjct 39 AKVQLRLLGASHQVLLEEEGRTCSETVACLPGSSTPLPLGVAESVGDWDYEFAARVETLS 98
Query 95 EAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGT 154
+F A+ L L G FPG A TA+ A+ G RWRTWH YP G
Sbjct 99 PGSFAGRAQELLALVADHPHGLAGTFPGSPYAFTAMLAQRTGGEVRWRTWHAYPQE--GQ 156
Query 155 VVHTTSR 161
+V T +R
Sbjct 157 LVVTRTR 163
>gi|302520226|ref|ZP_07272568.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429121|gb|EFL00937.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=201
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/129 (35%), Positives = 57/129 (45%), Gaps = 10/129 (7%)
Query 43 LQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLP----ESTHAPGYHLQSHTETHDE 95
+QL +LGASH V +E G E V+C+ G LP E YH + E
Sbjct 1 MQLRLLGASHQVLLEDEHGECSETVACLPGG-GAPLPVGVVEEFDGFDYHFAARVEELPP 59
Query 96 AAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGGTV 155
AF A+ L L GVFPG A TA+ + +WRTWH YP G +
Sbjct 60 GAFAGRAQELLALVAEHPHGLAGVFPGSPDAFTAMLVQRRDGETQWRTWHAYP--EDGQL 117
Query 156 VHTTSRWRP 164
V T +R P
Sbjct 118 VVTRTRLAP 126
>gi|315500969|ref|YP_004079856.1| hypothetical protein ML5_0152 [Micromonospora sp. L5]
gi|315407588|gb|ADU05705.1| hypothetical protein ML5_0152 [Micromonospora sp. L5]
Length=164
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/154 (36%), Positives = 69/154 (45%), Gaps = 8/154 (5%)
Query 11 VDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARS 70
VD S A L L L P LA + L+L +LGASH V V G E V+C+
Sbjct 10 VDTSAADLSLALGGPELPALAVRDIDLPGLPRLRLRLLGASHQV-VLGGLTETVACLP-G 67
Query 71 RGGDLPESTH--APGYHLQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALT 128
R LP++ H GY + D R LR L GVFPGD+ A+T
Sbjct 68 RPPHLPDALHDETTGYRFLATVLRPDGDGLRTRVAALRAELAGDPYALIGVFPGDEDAVT 127
Query 129 ALAAE---PDGTGWRWRTWHLYPSASGGTVVHTT 159
AL+ PDG WRTWH+YP + + T
Sbjct 128 ALSVRPRPPDGV-LAWRTWHVYPQTNELVLTETV 160
>gi|21220922|ref|NP_626701.1| hypothetical protein SCO2458 [Streptomyces coelicolor A3(2)]
gi|289771806|ref|ZP_06531184.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|7940258|emb|CAB86123.2| conserved hypothetical protein SCC24.29c [Streptomyces coelicolor
A3(2)]
gi|289702005|gb|EFD69434.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length=172
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/144 (35%), Positives = 60/144 (42%), Gaps = 14/144 (9%)
Query 29 PLATHRLAHTDGSALQLGVLGASHVVTVEGRFCEEVSCVARSRGGDLPESTHAPG---YH 85
P R G A++L +LGASH V G E V+C+ + G T P Y
Sbjct 28 PALAEREVSVGGLAVRLRLLGASHQV-FAGPVRETVACLPEAVRGLPTTLTRQPAGWTYD 86
Query 86 LQSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAE--------PDGT 137
+ TE D A F R A L GVFPG A+TA+ E D
Sbjct 87 FSAVTECLDPAEFSARVADALSRADEAEHSLSGVFPGSPEAVTAVVVEACDEGLGGADRP 146
Query 138 GWRWRTWHLYPSASGGTVVHTTSR 161
G WRTWH YP G +V T SR
Sbjct 147 GLAWRTWHSYP--QDGHIVSTHSR 168
>gi|302559496|ref|ZP_07311838.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302477114|gb|EFL40207.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length=179
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/130 (37%), Positives = 59/130 (46%), Gaps = 10/130 (7%)
Query 39 DGSALQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLP----ESTHAPGYHLQSHTE 91
DGS LQL +LGASH V +E G E V+C+ S LP + Y + E
Sbjct 44 DGSRLQLRLLGASHQVLLEEERGLCSETVACIPGS-STPLPLGVAKRVDDWEYQFAARVE 102
Query 92 THDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSAS 151
+F A+ L + L GVFPG A TAL A+ WRTWH YP
Sbjct 103 ALSPGSFAGRAQELLALVSDHPQGLAGVFPGSPYAFTALLAQRHDGQVHWRTWHAYPQE- 161
Query 152 GGTVVHTTSR 161
G +V T +R
Sbjct 162 -GQLVATRTR 170
>gi|318062143|ref|ZP_07980864.1| hypothetical protein SSA3_29677 [Streptomyces sp. SA3_actG]
gi|333026025|ref|ZP_08454089.1| hypothetical protein STTU_3529 [Streptomyces sp. Tu6071]
gi|332745877|gb|EGJ76318.1| hypothetical protein STTU_3529 [Streptomyces sp. Tu6071]
Length=241
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/131 (35%), Positives = 58/131 (45%), Gaps = 10/131 (7%)
Query 41 SALQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLP----ESTHAPGYHLQSHTETH 93
+ +QL +LGASH V +E G E V+C+ G LP E YH + E
Sbjct 39 ATVQLRLLGASHQVLLEDEHGECSETVACLPGG-GAPLPVGVVEEFDGFDYHFAARVEEL 97
Query 94 DEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASGG 153
AF A+ L L GVFPG A TA+ + +WRTWH YP G
Sbjct 98 PPGAFAGRAQELLALVAEHPHGLAGVFPGSPDAFTAMLVQRRDGETQWRTWHAYP--EDG 155
Query 154 TVVHTTSRWRP 164
+V T +R P
Sbjct 156 QLVVTRTRLAP 166
>gi|328883467|emb|CCA56706.1| hypothetical protein SVEN_3420 [Streptomyces venezuelae ATCC
10712]
Length=172
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/129 (35%), Positives = 54/129 (42%), Gaps = 8/129 (6%)
Query 39 DGSALQLGVLGASHVVTVE--GRFCEEVSCVARSRGGDLPESTHAP----GYHLQSHTET 92
G+ LQL +LGASH V +E GR C E LP Y + ET
Sbjct 37 SGARLQLRLLGASHQVLLEEEGRNCSETVACMPGSSTPLPLGVSKRVGEWEYEFAARVET 96
Query 93 HDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPSASG 152
+F A+ L L G FPG A TA+ A+ RWRTWH YP
Sbjct 97 LSHGSFAGRAQELLALVADHPNGLAGTFPGSPHAFTAMLAQRHEGQVRWRTWHAYPQE-- 154
Query 153 GTVVHTTSR 161
G +V T +R
Sbjct 155 GQLVVTRTR 163
>gi|297193116|ref|ZP_06910514.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721288|gb|EDY65196.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=189
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/135 (35%), Positives = 59/135 (44%), Gaps = 22/135 (16%)
Query 40 GSALQLGVLGASHVVTVE---GRFCEEVSCVARS----------RGGDLPESTHAPGYHL 86
GS LQL +LGASH V +E G E V+C+ S R GD Y
Sbjct 38 GSKLQLRLLGASHQVLLEEKKGTCSETVACIPGSSTPLPLGVAKRLGDWE-------YEF 90
Query 87 QSHTETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHL 146
+ ET + +F A+ L L G FPG A TA+ A+ RWRTWH
Sbjct 91 AARVETLSQRSFAGRAQELLALVADHPHGLAGTFPGSPHAFTAMVAQSGEGQARWRTWHA 150
Query 147 YPSASGGTVVHTTSR 161
YP G +V T +R
Sbjct 151 YPQE--GRLVVTRTR 163
>gi|302543738|ref|ZP_07296080.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461356|gb|EFL24449.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=183
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/116 (38%), Positives = 55/116 (48%), Gaps = 6/116 (5%)
Query 40 GSALQLGVLGASHVVTVE---GRFCEEVSCVARSRGG-DLPESTHAPG--YHLQSHTETH 93
G A+QL +LGASH V +E GR E V+C++ S L ST G Y + E
Sbjct 38 GFAVQLRLLGASHQVLLEAEDGRCSETVACISGSSTPLPLGVSTLVDGREYEFAARVEEL 97
Query 94 DEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPS 149
+ AF A+ L L G FPG A TAL A+ + WRTWH YP
Sbjct 98 SQGAFAGRAQELLALVADHPHGLAGTFPGSPHAFTALLAQWNEGTVGWRTWHAYPQ 153
>gi|182437216|ref|YP_001824935.1| hypothetical protein SGR_3423 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777847|ref|ZP_08237112.1| hypothetical protein SACT1_3690 [Streptomyces cf. griseus XylebKG-1]
gi|178465732|dbj|BAG20252.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658180|gb|EGE43026.1| hypothetical protein SACT1_3690 [Streptomyces griseus XylebKG-1]
Length=173
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/132 (35%), Positives = 59/132 (45%), Gaps = 10/132 (7%)
Query 37 HTDGSALQLGVLGASHVVTVE---GRFCEEVSCVARSRGGDLPESTHAP----GYHLQSH 89
DG+ LQL +LGASH V ++ G E V+C+ S LP Y +
Sbjct 35 QLDGAELQLRLLGASHQVLLQEDRGVCSETVACMPGS-STPLPLGVSKRLGDWEYEFAAR 93
Query 90 TETHDEAAFRRLARHLRERCTRATGWLGGVFPGDDAALTALAAEPDGTGWRWRTWHLYPS 149
ET + F A+ L + L G FPG A TA+ A+ RWRTWH YP
Sbjct 94 VETLTQGQFAGRAQELLALVSDHPHGLAGTFPGSPYAFTAMLAQRTEGQVRWRTWHAYPQ 153
Query 150 ASGGTVVHTTSR 161
G +V T +R
Sbjct 154 E--GQLVVTRTR 163
>gi|256397509|ref|YP_003119073.1| hypothetical protein Caci_8409 [Catenulispora acidiphila DSM
44928]
gi|256363735|gb|ACU77232.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=192
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/167 (32%), Positives = 69/167 (42%), Gaps = 14/167 (8%)
Query 6 LAIAPVDVSGALLGLVLNAPAPRPLATHRLAHTDGSALQLGVLGASHVVTVEGR-----F 60
L++ DV + L L+AP PL + R G +++ +LGASH + V
Sbjct 5 LSVPYRDVRASELSWSLDAPDQPPLHSGRHP-VGGLDVEVRILGASHQILVRTAGHGLLL 63
Query 61 CEEVSCVARSRGGDLP---ESTHAPGYHLQSHTETH--DEAAFRRLARHLRERCTRATGW 115
C E + G LP E GYH + E D F A LR+
Sbjct 64 CRETVACRDAAPGPLPIAIERELDDGYHYEVRCEVREVDTGHFPAWASALRDYADALPDA 123
Query 116 LGGVFPGDDAALTALAAEPDGTGWR---WRTWHLYPSASGGTVVHTT 159
VFP A+TA+ EP +G WRTWH YP A GG V T
Sbjct 124 TIAVFPASPDAVTAVVVEPLPSGLHGVLWRTWHTYPHAGGGGDVVAT 170
Lambda K H
0.320 0.134 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129330420882
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40