BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2599 Length=143 Score E Sequences producing significant alignments: (Bits) Value gi|15609736|ref|NP_217115.1| hypothetical protein Rv2599 [Mycoba... 288 2e-76 gi|31793783|ref|NP_856276.1| hypothetical protein Mb2630 [Mycoba... 285 1e-75 gi|289575309|ref|ZP_06455536.1| conserved membrane protein [Myco... 283 4e-75 gi|240173169|ref|ZP_04751827.1| hypothetical protein MkanA1_2790... 200 5e-50 gi|183982120|ref|YP_001850411.1| hypothetical protein MMAR_2106 ... 189 9e-47 gi|118617335|ref|YP_905667.1| hypothetical protein MUL_1710 [Myc... 178 2e-43 gi|254821086|ref|ZP_05226087.1| hypothetical protein MintA_14212... 171 3e-41 gi|342858576|ref|ZP_08715231.1| hypothetical protein MCOL_06861 ... 169 1e-40 gi|336461481|gb|EGO40350.1| hypothetical protein MAPs_30260 [Myc... 160 7e-38 gi|254775927|ref|ZP_05217443.1| hypothetical protein MaviaA2_148... 158 3e-37 gi|118465773|ref|YP_882660.1| hypothetical protein MAV_3478 [Myc... 154 4e-36 gi|8919149|emb|CAB96066.1| hypothetical protein [Mycobacterium a... 152 2e-35 gi|296170849|ref|ZP_06852410.1| conserved hypothetical protein [... 149 1e-34 gi|126434452|ref|YP_001070143.1| hypothetical protein Mjls_1864 ... 109 1e-22 gi|108798852|ref|YP_639049.1| hypothetical protein Mmcs_1884 [My... 109 1e-22 gi|312140248|ref|YP_004007584.1| lipoprotein [Rhodococcus equi 1... 78.2 3e-13 gi|325677005|ref|ZP_08156676.1| hypothetical protein HMPREF0724_... 78.2 4e-13 gi|2145643|pir||S72746 B1177_F3_123 protein - Mycobacterium lepr... 77.4 6e-13 gi|158316457|ref|YP_001508965.1| hypothetical protein Franean1_4... 69.3 2e-10 gi|336324736|ref|YP_004604702.1| hypothetical protein CRES_0175 ... 67.4 8e-10 gi|319949177|ref|ZP_08023266.1| hypothetical protein ES5_07187 [... 60.5 7e-08 gi|229489054|ref|ZP_04382920.1| conserved hypothetical protein [... 59.3 2e-07 gi|226308709|ref|YP_002768669.1| hypothetical protein RER_52220 ... 59.3 2e-07 gi|111019307|ref|YP_702279.1| hypothetical protein RHA1_ro02315 ... 57.0 1e-06 gi|226361447|ref|YP_002779225.1| hypothetical protein ROP_20330 ... 56.6 1e-06 gi|225020605|ref|ZP_03709797.1| hypothetical protein CORMATOL_00... 51.2 5e-05 gi|25029105|ref|NP_739159.1| hypothetical protein CE2549 [Coryne... 51.2 5e-05 gi|305679686|ref|ZP_07402496.1| conserved hypothetical protein [... 50.1 1e-04 gi|227506040|ref|ZP_03936089.1| conserved hypothetical protein [... 46.6 0.001 gi|159035796|ref|YP_001535049.1| hypothetical protein Sare_0123 ... 45.1 0.004 gi|19553897|ref|NP_601899.1| hypothetical protein NCgl2610 [Cory... 42.7 0.019 gi|145296700|ref|YP_001139521.1| hypothetical protein cgR_2605 [... 40.8 0.066 gi|134097072|ref|YP_001102733.1| hypothetical protein SACE_0459 ... 38.9 0.22 gi|117164600|emb|CAJ88146.1| putative lipoprotein [Streptomyces ... 38.1 0.42 gi|21220921|ref|NP_626700.1| lipoprotein [Streptomyces coelicolo... 37.0 0.97 gi|213965095|ref|ZP_03393293.1| conserved hypothetical protein [... 36.6 1.4 gi|337741294|ref|YP_004633022.1| lipoprotein-releasing system tr... 36.2 1.8 >gi|15609736|ref|NP_217115.1| hypothetical protein Rv2599 [Mycobacterium tuberculosis H37Rv] gi|15842138|ref|NP_337175.1| hypothetical protein MT2674 [Mycobacterium tuberculosis CDC1551] gi|148662438|ref|YP_001283961.1| hypothetical protein MRA_2627 [Mycobacterium tuberculosis H37Ra] 58 more sequence titles Length=143 Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ Sbjct 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG Sbjct 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 Query 121 PGFTPGSPSGGSGGSPGGPGGSK 143 PGFTPGSPSGGSGGSPGGPGGSK Sbjct 121 PGFTPGSPSGGSGGSPGGPGGSK 143 >gi|31793783|ref|NP_856276.1| hypothetical protein Mb2630 [Mycobacterium bovis AF2122/97] gi|121638484|ref|YP_978708.1| hypothetical protein BCG_2622 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990978|ref|YP_002645665.1| hypothetical protein JTY_2616 [Mycobacterium bovis BCG str. Tokyo 172] 16 more sequence titles Length=143 Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 142/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLFLVAG LAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ Sbjct 1 MSRNRLFLVAGILAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG Sbjct 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 Query 121 PGFTPGSPSGGSGGSPGGPGGSK 143 PGFTPGSPSGGSGGSPGGPGGSK Sbjct 121 PGFTPGSPSGGSGGSPGGPGGSK 143 >gi|289575309|ref|ZP_06455536.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339632627|ref|YP_004724269.1| hypothetical protein MAF_26160 [Mycobacterium africanum GM041182] gi|289539740|gb|EFD44318.1| conserved membrane protein [Mycobacterium tuberculosis K85] gi|339331983|emb|CCC27686.1| putative conserved membrane protein [Mycobacterium africanum GM041182] Length=143 Score = 283 bits (725), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLFLVAG LAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ Sbjct 1 MSRNRLFLVAGILAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG Sbjct 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 Query 121 PGFTPGSPSGGSGGSPGGPGGSK 143 PGFTPGSPS GSGGSPGGPGGSK Sbjct 121 PGFTPGSPSSGSGGSPGGPGGSK 143 >gi|240173169|ref|ZP_04751827.1| hypothetical protein MkanA1_27901 [Mycobacterium kansasii ATCC 12478] Length=143 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 95/124 (77%), Positives = 106/124 (86%), Gaps = 0/124 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRL L+AG LAVAA VSL+SG+ LLNR++ SYIASHYR+ESRD NGTRYLCTGS Q Sbjct 1 MSRNRLLLIAGGLAVAATVSLVSGVVLLNRNISSYIASHYREESRDANGTRYLCTGSAHQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL YQ PAARA+ D EYLRYRNNIV VGPDG+YPC IRVE LSAGY+HG++VFLG Sbjct 61 VADTLAHYQAPAARAASGDNEYLRYRNNIVIVGPDGSYPCSIRVEPLSAGYSHGSFVFLG 120 Query 121 PGFT 124 PGFT Sbjct 121 PGFT 124 >gi|183982120|ref|YP_001850411.1| hypothetical protein MMAR_2106 [Mycobacterium marinum M] gi|183175446|gb|ACC40556.1| conserved hypothetical protein [Mycobacterium marinum M] Length=143 Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 92/123 (75%), Positives = 114/123 (93%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLF++A +LAVAA V+++ G++LLNR++GSYIASHY+QESRDVN TRYLC GSPKQ Sbjct 1 MSRNRLFVIASALAVAALVAMVFGVSLLNRNIGSYIASHYQQESRDVNATRYLCEGSPKQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +Y++PAARAS+ +TEYLRYR+NIV+VGP GT+PCII+VENLSAGYNHG+Y+FLG Sbjct 61 VANTLSRYKSPAARASYGETEYLRYRHNIVSVGPAGTHPCIIKVENLSAGYNHGSYIFLG 120 Query 121 PGF 123 PGF Sbjct 121 PGF 123 >gi|118617335|ref|YP_905667.1| hypothetical protein MUL_1710 [Mycobacterium ulcerans Agy99] gi|118569445|gb|ABL04196.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=126 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 79/105 (76%), Positives = 98/105 (94%), Gaps = 0/105 (0%) Query 19 VSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHT 78 V+++ G++LLNR++GSYIASHY+QESRDVN TRYLC GSPKQVA TL +Y++PAARAS+ Sbjct 2 VAMVFGVSLLNRNIGSYIASHYQQESRDVNATRYLCEGSPKQVANTLSRYKSPAARASYG 61 Query 79 DTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGF 123 +TEYLRYR+NIV+VGP GT+PCII+VENLSAGYNHG+Y+FLGPGF Sbjct 62 ETEYLRYRHNIVSVGPAGTHPCIIKVENLSAGYNHGSYIFLGPGF 106 >gi|254821086|ref|ZP_05226087.1| hypothetical protein MintA_14212 [Mycobacterium intracellulare ATCC 13950] Length=143 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/124 (64%), Positives = 97/124 (79%), Gaps = 0/124 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSR RLF+++G LA A V LI+GI LL +++ SY+A HY + + DVNG RY C+GSP+Q Sbjct 1 MSRTRLFVISGLLAAGAVVCLITGIILLQKNIASYVAGHYHEYAHDVNGRRYQCSGSPRQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 A TL Y P ARA + +TEYLRY NNIV VGPDGTYPC IRVE+LSAGY+HGA++FLG Sbjct 61 AADTLAAYAHPEARADNGNTEYLRYANNIVIVGPDGTYPCSIRVESLSAGYSHGAFIFLG 120 Query 121 PGFT 124 PGFT Sbjct 121 PGFT 124 >gi|342858576|ref|ZP_08715231.1| hypothetical protein MCOL_06861 [Mycobacterium colombiense CECT 3035] gi|342134280|gb|EGT87460.1| hypothetical protein MCOL_06861 [Mycobacterium colombiense CECT 3035] Length=146 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/123 (66%), Positives = 94/123 (77%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 +SRNRLF++AG L VA LI GI LL +++ SY+A HY + +RDVNGTRY C+GSP Q Sbjct 4 VSRNRLFVIAGVLGVAGVTCLIFGILLLQKNIASYVAGHYHEYARDVNGTRYQCSGSPDQ 63 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL Y P ARA + TEYLRY NNIV VGPDG YPC IRVE LSAGY+HGA++FLG Sbjct 64 VADTLADYAEPDARADNGKTEYLRYSNNIVIVGPDGGYPCSIRVEPLSAGYSHGAFIFLG 123 Query 121 PGF 123 PGF Sbjct 124 PGF 126 >gi|336461481|gb|EGO40350.1| hypothetical protein MAPs_30260 [Mycobacterium avium subsp. paratuberculosis S397] Length=143 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 85/123 (70%), Positives = 101/123 (83%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLF++AG+LAVAA V L++GI LL +++ SY+A HY + +RDVNGTRY CTGSP+Q Sbjct 1 MSRNRLFVIAGALAVAAVVCLVTGIILLQKNIASYVAGHYHEYARDVNGTRYQCTGSPEQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +Y PAARA TEYLRY N+IV VGPDG YPC IRVE LSAGY+HGA+VFLG Sbjct 61 VADTLSEYAEPAARADDNKTEYLRYSNDIVIVGPDGNYPCSIRVEPLSAGYSHGAFVFLG 120 Query 121 PGF 123 PGF Sbjct 121 PGF 123 >gi|254775927|ref|ZP_05217443.1| hypothetical protein MaviaA2_14825 [Mycobacterium avium subsp. avium ATCC 25291] Length=161 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/123 (69%), Positives = 101/123 (83%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 +SRNRLF++AG+LAVAA V L++GI LL +++ SY+A HY + +RDVNGTRY CTGSP+Q Sbjct 19 VSRNRLFVIAGALAVAAVVCLVTGIILLQKNIASYVAGHYHEYARDVNGTRYQCTGSPEQ 78 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +Y PAARA TEYLRY N+IV VGPDG YPC IRVE LSAGY+HGA+VFLG Sbjct 79 VADTLSEYAEPAARADDNKTEYLRYSNDIVIVGPDGNYPCSIRVEPLSAGYSHGAFVFLG 138 Query 121 PGF 123 PGF Sbjct 139 PGF 141 >gi|118465773|ref|YP_882660.1| hypothetical protein MAV_3478 [Mycobacterium avium 104] gi|118167060|gb|ABK67957.1| conserved hypothetical protein [Mycobacterium avium 104] Length=143 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 83/123 (68%), Positives = 99/123 (81%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLF++AG+LAVAA V L++GI LL +++ SY+A HY + +RDVNGTRY CTGS +Q Sbjct 1 MSRNRLFVIAGALAVAAVVCLVTGIILLQKNIASYVAGHYHEYARDVNGTRYQCTGSSEQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +Y PAARA TEYLRY N+IV VGPDG YPC IRVE LSAGY+H A+VFLG Sbjct 61 VADTLSEYAEPAARADDNKTEYLRYSNDIVIVGPDGNYPCSIRVEPLSAGYSHRAFVFLG 120 Query 121 PGF 123 PGF Sbjct 121 PGF 123 >gi|8919149|emb|CAB96066.1| hypothetical protein [Mycobacterium avium subsp. paratuberculosis] Length=143 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/123 (67%), Positives = 99/123 (81%), Gaps = 0/123 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 +SRNRLF++AG+LAVAA V L++GI LL +++ SY+A HY + +RDVNGTRY CTGS +Q Sbjct 1 VSRNRLFVIAGALAVAAVVCLVTGIILLQKNIASYVAGHYHEYARDVNGTRYQCTGSSEQ 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +Y PAARA TEYLRY N+IV VGPDG YPC IRVE LSAGY+H A+VFLG Sbjct 61 VADTLSEYAEPAARADDNKTEYLRYSNDIVIVGPDGNYPCSIRVEPLSAGYSHRAFVFLG 120 Query 121 PGF 123 PGF Sbjct 121 PGF 123 >gi|296170849|ref|ZP_06852410.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894505|gb|EFG74246.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=143 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/124 (66%), Positives = 99/124 (80%), Gaps = 0/124 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 MSRNRLF+VAG+LAVAA L+ GI LL++++GSYIA HY + SRD NGTRY C+G Sbjct 1 MSRNRLFVVAGALAVAAVACLVPGIMLLHKNIGSYIAGHYHEYSRDANGTRYECSGPADD 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLG 120 VA TL +YQ P ARA++ +EYLRY NNIV VGPDG PC IR+E+L+AGY+HGA+VFLG Sbjct 61 VADTLAEYQGPQARAANGASEYLRYSNNIVIVGPDGNRPCSIRLESLNAGYSHGAFVFLG 120 Query 121 PGFT 124 PGFT Sbjct 121 PGFT 124 >gi|126434452|ref|YP_001070143.1| hypothetical protein Mjls_1864 [Mycobacterium sp. JLS] gi|126234252|gb|ABN97652.1| hypothetical protein Mjls_1864 [Mycobacterium sp. JLS] Length=143 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/119 (45%), Positives = 76/119 (64%), Gaps = 0/119 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 M+R LF ++G+LAV V L+ G++L+ ++ ++A++Y + + D +GT Y C+GSP Sbjct 1 MTRTGLFTLSGALAVGGVVCLLLGMSLMGGNIRDHVAANYSRYAGDADGTDYTCSGSPSA 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFL 119 VA L P AR + T YLRY + IV VGPDGT PC IRVE L A Y+ G ++FL Sbjct 61 VADDLAAQVRPEARTTDRGTTYLRYDDEIVIVGPDGTRPCTIRVEELGARYSSGGFIFL 119 >gi|108798852|ref|YP_639049.1| hypothetical protein Mmcs_1884 [Mycobacterium sp. MCS] gi|119867967|ref|YP_937919.1| hypothetical protein Mkms_1930 [Mycobacterium sp. KMS] gi|108769271|gb|ABG07993.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694056|gb|ABL91129.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=143 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/119 (45%), Positives = 76/119 (64%), Gaps = 0/119 (0%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQ 60 M+R LF ++G+LAV V L+ G++L+ ++ ++A++Y + + D +GT Y C+GSP Sbjct 1 MTRTGLFTLSGALAVGGVVCLLLGMSLMGGNIRDHVAANYSRYAGDTDGTDYTCSGSPSA 60 Query 61 VATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFL 119 VA L P AR + T YLRY + IV VGPDGT PC IRVE L A Y+ G ++FL Sbjct 61 VADDLAAQVRPEARTTDRGTTYLRYDDEIVIVGPDGTRPCTIRVEELGARYSSGGFIFL 119 >gi|312140248|ref|YP_004007584.1| lipoprotein [Rhodococcus equi 103S] gi|311889587|emb|CBH48904.1| putative lipoprotein [Rhodococcus equi 103S] Length=134 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/139 (41%), Positives = 76/139 (55%), Gaps = 11/139 (7%) Query 8 LVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATT--- 64 +VAG+L + A V+L +G N V ++A + + T Y SP V TT Sbjct 4 VVAGAL-LGAVVALTAGCGGSN--VRDHLADRFEHRGSQGDITNYW---SPDPVGTTVTR 57 Query 65 LVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGFT 124 +V PAAR + EYLRY ++IVTVGP I VE+L Y G +V+LGPGFT Sbjct 58 IVDEDEPAARKADGGNEYLRYNDDIVTVGPAAGGGSNISVEDLDGRYRGGHFVYLGPGFT 117 Query 125 PGSPSGGSGGSPGGPGGSK 143 PGSP+ G+ + GG G +K Sbjct 118 PGSPAAGN--TSGGSGDAK 134 >gi|325677005|ref|ZP_08156676.1| hypothetical protein HMPREF0724_14459 [Rhodococcus equi ATCC 33707] gi|325552167|gb|EGD21858.1| hypothetical protein HMPREF0724_14459 [Rhodococcus equi ATCC 33707] Length=137 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/139 (41%), Positives = 76/139 (55%), Gaps = 11/139 (7%) Query 8 LVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATT--- 64 +VAG+L + A V+L +G N V ++A + + T Y SP V TT Sbjct 7 VVAGAL-LGAVVALTAGCGGSN--VRDHLADRFEHRGSQGDITNYW---SPDPVGTTVTR 60 Query 65 LVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGFT 124 +V PAAR + EYLRY ++IVTVGP I VE+L Y G +V+LGPGFT Sbjct 61 IVDEDEPAARKADGGNEYLRYNDDIVTVGPAAGGGSNISVEDLDGRYRGGHFVYLGPGFT 120 Query 125 PGSPSGGSGGSPGGPGGSK 143 PGSP+ G+ + GG G +K Sbjct 121 PGSPAAGN--TSGGSGDAK 137 >gi|2145643|pir||S72746 B1177_F3_123 protein - Mycobacterium leprae gi|466835|gb|AAA17110.1| B1177_F3_123 [Mycobacterium leprae] Length=267 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/77 (52%), Positives = 48/77 (63%), Gaps = 1/77 (1%) Query 25 ITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQV-ATTLVKYQTPAARASHTDTEYL 83 I L ++ + SYIAS Y + S DVNG R +C GSP QV A T YQ P AR ++ +YL Sbjct 43 IILPDKKISSYIASRYHEHSHDVNGIRCVCNGSPTQVIAQTHTGYQKPEARTANNTNQYL 102 Query 84 RYRNNIVTVGPDGTYPC 100 RY NNIVTVG Y C Sbjct 103 RYSNNIVTVGLFSNYMC 119 >gi|158316457|ref|YP_001508965.1| hypothetical protein Franean1_4692 [Frankia sp. EAN1pec] gi|158111862|gb|ABW14059.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length=145 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/102 (37%), Positives = 56/102 (55%), Gaps = 1/102 (0%) Query 29 NRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDTEYLRYRNN 88 + +V ++A YR+ + Y+ T + A + PAARAS ++YLR+ ++ Sbjct 34 DSNVRGWLADSYRRTDTRGDTESYMSTEPVDRTAAAIAGGVAPAARASDGGSQYLRFADD 93 Query 89 IVTVGPDGTYP-CIIRVENLSAGYNHGAYVFLGPGFTPGSPS 129 IV V P +RVE+L G++HG Y LG GFTPGSP+ Sbjct 94 IVIVSPAAVGAGSTVRVEDLDDGFSHGQYARLGSGFTPGSPA 135 >gi|336324736|ref|YP_004604702.1| hypothetical protein CRES_0175 [Corynebacterium resistens DSM 45100] gi|336100718|gb|AEI08538.1| putative secreted protein [Corynebacterium resistens DSM 45100] Length=129 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/93 (40%), Positives = 49/93 (53%), Gaps = 3/93 (3%) Query 38 SHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARA--SHTDTEYLRYRNNIVTVGPD 95 S+ R+ + V Y C G PK VA + K P ARA S T ++RY + IV V Sbjct 23 SYIRKNFKSVGTNTYRCEGDPKAVADQIAKNVRPKARATDSQTGEHFMRYSDKIVRVSGR 82 Query 96 GTYPCIIRVENLSAGYNHGAYVFLGPGFTPGSP 128 G C IR+E+ Y G +++LGPGF P SP Sbjct 83 GPTKCEIRMES-DRHYRSGGFIYLGPGFNPSSP 114 >gi|319949177|ref|ZP_08023266.1| hypothetical protein ES5_07187 [Dietzia cinnamea P4] gi|319437163|gb|EFV92194.1| hypothetical protein ES5_07187 [Dietzia cinnamea P4] Length=139 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/130 (29%), Positives = 62/130 (48%), Gaps = 7/130 (5%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTR--YLCTGSP 58 M R R +++A VA +++ G+ L+ G + R+ V G Y C G Sbjct 1 MKRYRGWIIA---LVAGLCAVLLGLVLVG--AGQNAVRYVRENYTPVAGASQTYECRGDR 55 Query 59 KQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVF 118 A + ++ P A + DT YLRY ++++ +G G C ++++ S G ++F Sbjct 56 DATAKDISDHERPDADQLNEDTRYLRYGDDMIVIGRSGDLACRVQLDENSRTLRSGGFIF 115 Query 119 LGPGFTPGSP 128 LG F PGSP Sbjct 116 LGGAFGPGSP 125 >gi|229489054|ref|ZP_04382920.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229324558|gb|EEN90313.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=129 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (35%), Positives = 46/90 (52%), Gaps = 0/90 (0%) Query 34 SYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVG 93 +IA +Y + S+D + Y + +V PAAR++ EYLRY ++IVTV Sbjct 21 DFIADNYSKTSQDGDVVLYSSKDPVGTTVSRIVDADEPAARSADGGNEYLRYDDDIVTVS 80 Query 94 PDGTYPCIIRVENLSAGYNHGAYVFLGPGF 123 I+VE++ Y G Y +LGPGF Sbjct 81 SASGGGSTIKVEDIDGTYRSGGYAYLGPGF 110 >gi|226308709|ref|YP_002768669.1| hypothetical protein RER_52220 [Rhodococcus erythropolis PR4] gi|226187826|dbj|BAH35930.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=135 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (35%), Positives = 46/90 (52%), Gaps = 0/90 (0%) Query 34 SYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVG 93 +IA +Y + S+D + Y + +V PAAR++ EYLRY ++IVTV Sbjct 27 DFIADNYSKTSQDGDVVLYSSKDPVGTTVSRIVDADEPAARSADGGNEYLRYDDDIVTVS 86 Query 94 PDGTYPCIIRVENLSAGYNHGAYVFLGPGF 123 I+VE++ Y G Y +LGPGF Sbjct 87 SASGGGSTIKVEDIDGTYRSGGYAYLGPGF 116 >gi|111019307|ref|YP_702279.1| hypothetical protein RHA1_ro02315 [Rhodococcus jostii RHA1] gi|110818837|gb|ABG94121.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=137 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/94 (36%), Positives = 49/94 (53%), Gaps = 4/94 (4%) Query 32 VGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVT 91 V YIA Y ++ + Y + +V + PAAR + +EYLRY ++IVT Sbjct 27 VRDYIADTYALQNTAGDAKTYTSNDPVGTTVSNIVAEEEPAARKADGGSEYLRYDDDIVT 86 Query 92 V--GPDGTYPCIIRVENLSAGYNHGAYVFLGPGF 123 V GP G ++RVE++ Y G + +LGPGF Sbjct 87 VSAGPGGG--SLVRVEDIDGRYRSGGFAYLGPGF 118 >gi|226361447|ref|YP_002779225.1| hypothetical protein ROP_20330 [Rhodococcus opacus B4] gi|226239932|dbj|BAH50280.1| hypothetical protein [Rhodococcus opacus B4] Length=137 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/109 (33%), Positives = 52/109 (48%), Gaps = 0/109 (0%) Query 15 VAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAAR 74 +A + L+ T V YIA Y ++ + Y +T+V + PAAR Sbjct 10 LAPMLLLVLAATACGGGVRDYIADTYALQNTAGDAKTYTSKDPVGTTVSTIVAEEPPAAR 69 Query 75 ASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFLGPGF 123 + EYLRY ++IVTV ++RVE++ Y G Y +LGPGF Sbjct 70 KADGGNEYLRYDDDIVTVSGAPGGGSLVRVEDIDGRYRSGGYAYLGPGF 118 >gi|225020605|ref|ZP_03709797.1| hypothetical protein CORMATOL_00612 [Corynebacterium matruchotii ATCC 33806] gi|224946551|gb|EEG27760.1| hypothetical protein CORMATOL_00612 [Corynebacterium matruchotii ATCC 33806] Length=159 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/128 (31%), Positives = 65/128 (51%), Gaps = 11/128 (8%) Query 1 MSRNRLFLVAGSLAVAAAVSLISG--ITLLNRDVGSYIASHYRQESRD---VNGTRYLCT 55 M ++ +A + + A ++ + G ++ N D+ YIA Y++ + + Y C+ Sbjct 1 MESSKWLKIAIACLIGAVLTFVLGYAVSSDNTDISKYIAKTYKKANASGFASDQAVYSCS 60 Query 56 GSPKQVATTLVKY--QTPAARA--SHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGY 111 G PK+VA +V + P A+ S T+T YLRY N+V V C+I VE+ Sbjct 61 GEPKKVANDIVTKGPRRPDAQKEDSKTNTVYLRYPKNLVQVLTKNN-QCLIVVES-HKRL 118 Query 112 NHGAYVFL 119 N+G YVF+ Sbjct 119 NNGTYVFM 126 >gi|25029105|ref|NP_739159.1| hypothetical protein CE2549 [Corynebacterium efficiens YS-314] gi|259505897|ref|ZP_05748799.1| secreted protein [Corynebacterium efficiens YS-314] gi|23494392|dbj|BAC19359.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|259166501|gb|EEW51055.1| secreted protein [Corynebacterium efficiens YS-314] Length=133 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (56%), Gaps = 3/70 (4%) Query 61 VATTLVKYQTPAARASH--TDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVF 118 VA + + P+ RA+ T YLRY +V + +GT C I VE L N GA+++ Sbjct 50 VADRIAAMERPSERATDPATGDTYLRYPKKLVIISGEGTPDCRITVEGLDR-VNSGAFIW 108 Query 119 LGPGFTPGSP 128 LGPGF P +P Sbjct 109 LGPGFVPSAP 118 >gi|305679686|ref|ZP_07402496.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305660306|gb|EFM49803.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=159 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/128 (30%), Positives = 64/128 (50%), Gaps = 11/128 (8%) Query 1 MSRNRLFLVAGSLAVAAAVSLISG--ITLLNRDVGSYIASHYRQESRD---VNGTRYLCT 55 M ++ +A + + A ++ + G ++ N D+ YIA Y++ + + Y C+ Sbjct 1 MESSKWLKIAIACLIGAVLTFVLGYAVSSDNTDISKYIAKTYKKANASGFASDQAVYSCS 60 Query 56 GSPKQVATTLVKY--QTPAARAS--HTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGY 111 G PK+VA +V + P A+ T+T YLRY N+V V C+I VE+ Sbjct 61 GEPKKVANDIVTKGPRRPDAQKEDPKTNTVYLRYPKNLVQVLTKNN-QCLIVVES-HKRL 118 Query 112 NHGAYVFL 119 N+G YVF+ Sbjct 119 NNGTYVFM 126 >gi|227506040|ref|ZP_03936089.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197322|gb|EEI77370.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=129 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 36/64 (57%), Gaps = 3/64 (4%) Query 62 ATTLVKYQTPAARASH--TDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYVFL 119 A L P AR T TEYLRYR IV V P G C +RVENL ++ G Y+FL Sbjct 47 ANRLAAEHKPKARQFDPATGTEYLRYRKQIVKVEPTGPQNCSVRVENLD-HFHDGTYIFL 105 Query 120 GPGF 123 GPGF Sbjct 106 GPGF 109 >gi|159035796|ref|YP_001535049.1| hypothetical protein Sare_0123 [Salinispora arenicola CNS-205] gi|157914631|gb|ABV96058.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length=141 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/140 (28%), Positives = 59/140 (43%), Gaps = 5/140 (3%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQ---ESRDVNGTRYLCTGS 57 M+ R F+VA + AV A+ + I N ++ HY + + D Y T Sbjct 1 MNSRRWFVVAAAFAVIGALVVALAIGYGNFSPRGFVEDHYERAAAQDLDDEALAYTSTKR 60 Query 58 PKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYNHGAYV 117 P QVA + PA + + YLRY ++ V + P +I +E L+ Y + Sbjct 61 PSQVAQEITDAWRPADQYIDSSGVYLRYDDDSVVILPVAA-GSLILLERLTTAYPR-YHS 118 Query 118 FLGPGFTPGSPSGGSGGSPG 137 +G + G S GG PG Sbjct 119 LVGSHWGWGRGSTVRGGGPG 138 >gi|19553897|ref|NP_601899.1| hypothetical protein NCgl2610 [Corynebacterium glutamicum ATCC 13032] gi|62391540|ref|YP_226942.1| hypothetical protein cg2992 [Corynebacterium glutamicum ATCC 13032] gi|21325476|dbj|BAC00098.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41326882|emb|CAF20726.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032] gi|344046234|gb|EGV41900.1| hypothetical protein CgS9114_00745 [Corynebacterium glutamicum S9114] Length=137 Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/90 (36%), Positives = 44/90 (49%), Gaps = 9/90 (10%) Query 32 VGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASH--TDTEYLRYRNNI 89 VGS ++ + NGT Y C G V +V TP RA+ T YLRY N+ Sbjct 31 VGSQVSDRWPGN----NGT-YSCAGE-SGVVDEIVNMSTPTDRATDPATGDTYLRYSKNL 84 Query 90 VTVGPDGTYPCIIRVENLSAGYNHGAYVFL 119 + + +GT C I VE L N GA+++L Sbjct 85 IIISGEGTPECTITVEGLDR-VNSGAFIWL 113 >gi|145296700|ref|YP_001139521.1| hypothetical protein cgR_2605 [Corynebacterium glutamicum R] gi|140846620|dbj|BAF55619.1| hypothetical protein [Corynebacterium glutamicum R] Length=137 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 31/90 (35%), Positives = 44/90 (49%), Gaps = 9/90 (10%) Query 32 VGSYIASHYRQESRDVNGTRYLCTGSPKQVATTLVKYQTPAARASH--TDTEYLRYRNNI 89 VGS ++ + NGT + C G V +V TP RA+ T YLRY N+ Sbjct 31 VGSQVSDRWPGN----NGT-HSCAGE-SGVVDEIVNMSTPTDRATDPATGDTYLRYSKNL 84 Query 90 VTVGPDGTYPCIIRVENLSAGYNHGAYVFL 119 + + +GT C I VE L N GA+++L Sbjct 85 IIISGEGTPECTITVEGLDR-VNSGAFIWL 113 >gi|134097072|ref|YP_001102733.1| hypothetical protein SACE_0459 [Saccharopolyspora erythraea NRRL 2338] gi|291006987|ref|ZP_06564960.1| hypothetical protein SeryN2_20908 [Saccharopolyspora erythraea NRRL 2338] gi|133909695|emb|CAL99807.1| hypothetical protein SACE_0459 [Saccharopolyspora erythraea NRRL 2338] Length=145 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/119 (27%), Positives = 55/119 (47%), Gaps = 10/119 (8%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVG--SYIASHYRQESR-----DVNGTRYL 53 M FL+ G AV A V I+ + + + G Y+A+HY++ + D + Y Sbjct 1 MKPRLWFLLGGICAVLALV--IALVMIFSTGTGPRGYVANHYQRAAHLDLRGDDDNRAYT 58 Query 54 CTGSPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGYN 112 +P V+ + P A+A+ T YLRY+++ V V P +I V ++ Y+ Sbjct 59 SPLTPSVVSREITSRWQPVAQAADTSGIYLRYKDDAVIVQPRDR-GSVIHVMDVDHAYH 116 >gi|117164600|emb|CAJ88146.1| putative lipoprotein [Streptomyces ambofaciens ATCC 23877] Length=134 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 39/142 (28%), Positives = 65/142 (46%), Gaps = 11/142 (7%) Query 4 NRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTRYL-CTGSPKQVA 62 N LV G++A L+S + D G + + +++ V+G+R+L SP +VA Sbjct 2 NSARLVRGAVAATLVTLLLSACSSGGGDEG--VPRSWIRDTYTVSGSRWLDKDSSPARVA 59 Query 63 TTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGY-NHGAYVFLGP 121 + ++ R+S +LRY +++VTV P +I +E+ GY H ++ P Sbjct 60 DAIHDHRKALDRSSGGGMRFLRYGDDMVTVSPH-RGGSLIEIEDYRNGYRRHQQHLVNWP 118 Query 122 GFTPGSPSGGSGGSPGGPGGSK 143 S G GGPG K Sbjct 119 NPNSQSYRG------GGPGEGK 134 >gi|21220921|ref|NP_626700.1| lipoprotein [Streptomyces coelicolor A3(2)] gi|289771807|ref|ZP_06531185.1| lipoprotein [Streptomyces lividans TK24] gi|7414571|emb|CAB86122.1| putative lipoprotein [Streptomyces coelicolor A3(2)] gi|289702006|gb|EFD69435.1| lipoprotein [Streptomyces lividans TK24] Length=131 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/82 (33%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query 57 SPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVGPDGTYPCIIRVENLSAGY-NHGA 115 SP +VA + ++ RAS E+LRY +++VTV P + I +E+ GY H Sbjct 53 SPAKVADAIDDHRDALDRASGDGKEFLRYGDDMVTVSPYRS-GSTIEIEDYRNGYRRHHQ 111 Query 116 YVFLGPGFTPGSPSGGSGGSPG 137 ++ P +PS GG PG Sbjct 112 HLTYWP-----NPSSFRGGGPG 128 >gi|213965095|ref|ZP_03393293.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213952209|gb|EEB63593.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=154 Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 37/80 (47%), Gaps = 6/80 (7%) Query 51 RYLC-TGSPKQVATTLVKYQTPAARASHTDTEYLRYRNNIVTVG---PD--GTYPCIIRV 104 R+ C P +V L + P A YLR + ++ V P+ C+I Sbjct 56 RWTCGDRDPIEVGRELKEEIKPQAYNEDGGAAYLRTKKHLFIVSRQTPETGAKDTCLITR 115 Query 105 ENLSAGYNHGAYVFLGPGFT 124 E+LS Y+ G +++LGPGF Sbjct 116 ESLSGRYSGGHFIYLGPGFG 135 >gi|337741294|ref|YP_004633022.1| lipoprotein-releasing system transmembrane protein LolC [Oligotropha carboxidovorans OM5] gi|336095378|gb|AEI03204.1| lipoprotein-releasing system transmembrane protein LolC [Oligotropha carboxidovorans OM4] gi|336098958|gb|AEI06781.1| lipoprotein-releasing system transmembrane protein LolC [Oligotropha carboxidovorans OM5] Length=423 Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%) Query 1 MSRNRLFLVAGSLAVAAAVSLISGITLLNRDVGSYIASHYRQESRDVNGTR-YLCTGSPK 59 + RN +FL+ + + AA+++ISG+ +L +D GS IA + + R +L TG+ Sbjct 276 VERNVMFLILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGATQGSIMRIFLITGAAI 335 Query 60 QVATTLVKYQTPAARASHTDT--EYLRYRNNIVTVGPD 95 V TLV + + +T +++ + N P+ Sbjct 336 GVVGTLVGFLLGVVVCLNIETIRQFISWLTNTELFSPE 373 Lambda K H 0.315 0.135 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129250525032 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40