BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2600
Length=133
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842139|ref|NP_337176.1| hypothetical protein MT2674.1 [Myco... 246 9e-64
gi|15609737|ref|NP_217116.1| integral membrane protein [Mycobact... 246 1e-63
gi|340627617|ref|YP_004746069.1| putative integral membrane prot... 243 9e-63
gi|240173168|ref|ZP_04751826.1| hypothetical protein MkanA1_2789... 206 1e-51
gi|118617334|ref|YP_905666.1| hypothetical protein MUL_1709 [Myc... 197 3e-49
gi|41407130|ref|NP_959966.1| hypothetical protein MAP1032c [Myco... 160 4e-38
gi|254821085|ref|ZP_05226086.1| hypothetical protein MintA_14207... 159 1e-37
gi|118465264|ref|YP_882661.1| hypothetical protein MAV_3479 [Myc... 158 2e-37
gi|296170850|ref|ZP_06852411.1| conserved hypothetical protein [... 157 4e-37
gi|342858575|ref|ZP_08715230.1| hypothetical protein MCOL_06856 ... 148 2e-34
gi|126434451|ref|YP_001070142.1| hypothetical protein Mjls_1863 ... 147 6e-34
gi|119867966|ref|YP_937918.1| hypothetical protein Mkms_1929 [My... 146 8e-34
gi|108798851|ref|YP_639048.1| hypothetical protein Mmcs_1883 [My... 146 1e-33
gi|158316458|ref|YP_001508966.1| hypothetical protein Franean1_4... 139 9e-32
gi|121638485|ref|YP_978709.1| putative integral membrane protein... 118 3e-25
gi|229488582|ref|ZP_04382448.1| conserved hypothetical protein [... 110 8e-23
gi|121638486|ref|YP_978710.1| putative integral membrane protein... 108 2e-22
gi|226308708|ref|YP_002768668.1| hypothetical protein RER_52210 ... 108 3e-22
gi|225020604|ref|ZP_03709796.1| hypothetical protein CORMATOL_00... 105 3e-21
gi|254775928|ref|ZP_05217444.1| hypothetical protein MaviaA2_148... 105 3e-21
gi|319949176|ref|ZP_08023265.1| hypothetical protein ES5_07182 [... 104 4e-21
gi|54025463|ref|YP_119705.1| hypothetical protein nfa34930 [Noca... 103 7e-21
gi|305679691|ref|ZP_07402501.1| conserved hypothetical protein [... 102 3e-20
gi|336324737|ref|YP_004604703.1| hypothetical protein CRES_0176 ... 101 3e-20
gi|226361446|ref|YP_002779224.1| hypothetical protein ROP_20320 ... 101 5e-20
gi|111019306|ref|YP_702278.1| hypothetical protein RHA1_ro02314 ... 100 8e-20
gi|25029104|ref|NP_739158.1| hypothetical protein CE2548 [Coryne... 99.0 2e-19
gi|213965129|ref|ZP_03393327.1| conserved hypothetical protein [... 97.4 6e-19
gi|295395546|ref|ZP_06805740.1| conserved hypothetical protein [... 96.7 1e-18
gi|19553896|ref|NP_601898.1| hypothetical protein NCgl2609 [Cory... 94.7 4e-18
gi|145296699|ref|YP_001139520.1| hypothetical protein cgR_2604 [... 94.4 5e-18
gi|227506041|ref|ZP_03936090.1| hypothetical membrane protein [C... 94.0 6e-18
gi|21325475|dbj|BAC00097.1| Hypothetical membrane protein [Coryn... 94.0 7e-18
gi|325677006|ref|ZP_08156677.1| hypothetical protein HMPREF0724_... 93.2 1e-17
gi|312140247|ref|YP_004007583.1| integral membrane protein [Rhod... 91.3 5e-17
gi|291298391|ref|YP_003509669.1| hypothetical protein Snas_0865 ... 90.1 1e-16
gi|134097070|ref|YP_001102731.1| hypothetical protein SACE_0457 ... 84.7 4e-15
gi|84494839|ref|ZP_00993958.1| hypothetical protein JNB_08574 [J... 84.0 6e-15
gi|326328865|ref|ZP_08195199.1| putative membrane protein [Nocar... 82.0 3e-14
gi|72162634|ref|YP_290291.1| hypothetical protein Tfu_2235 [Ther... 81.6 4e-14
gi|328886720|emb|CCA59959.1| probable conserved integral membran... 80.5 8e-14
gi|262200709|ref|YP_003271917.1| hypothetical protein Gbro_0702 ... 79.3 2e-13
gi|152966708|ref|YP_001362492.1| hypothetical protein Krad_2756 ... 79.0 2e-13
gi|315500971|ref|YP_004079858.1| hypothetical protein ML5_0154 [... 79.0 2e-13
gi|302864678|ref|YP_003833315.1| hypothetical protein Micau_0170... 78.2 4e-13
gi|54026141|ref|YP_120383.1| hypothetical protein nfa41700 [Noca... 77.0 8e-13
gi|297564088|ref|YP_003683061.1| protein of unknown function DUF... 76.3 1e-12
gi|238062037|ref|ZP_04606746.1| hypothetical protein MCAG_03003 ... 75.5 2e-12
gi|260905323|ref|ZP_05913645.1| hypothetical protein BlinB_08343... 74.7 4e-12
gi|343925478|ref|ZP_08764997.1| hypothetical protein GOALK_046_0... 74.3 5e-12
>gi|15842139|ref|NP_337176.1| hypothetical protein MT2674.1 [Mycobacterium tuberculosis CDC1551]
gi|253798318|ref|YP_003031319.1| hypothetical protein TBMG_01372 [Mycobacterium tuberculosis KZN
1435]
gi|254365269|ref|ZP_04981314.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
42 more sequence titles
Length=152
Score = 246 bits (628), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA
Sbjct 20 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 79
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM
Sbjct 80 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 139
Query 121 LLAVAGVIAAALS 133
LLAVAGVIAAALS
Sbjct 140 LLAVAGVIAAALS 152
>gi|15609737|ref|NP_217116.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|31793784|ref|NP_856277.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|148662439|ref|YP_001283962.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
26 more sequence titles
Length=133
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/133 (99%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
+VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA
Sbjct 1 MVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM
Sbjct 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
Query 121 LLAVAGVIAAALS 133
LLAVAGVIAAALS
Sbjct 121 LLAVAGVIAAALS 133
>gi|340627617|ref|YP_004746069.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|340005807|emb|CCC44973.1| putative conserved integral membrane protein [Mycobacterium canettii
CIPT 140010059]
Length=133
Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/133 (99%), Positives = 132/133 (99%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
+VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIV IAA
Sbjct 1 MVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVIIAA 60
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM
Sbjct 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
Query 121 LLAVAGVIAAALS 133
LLAVAGVIAAALS
Sbjct 121 LLAVAGVIAAALS 133
>gi|240173168|ref|ZP_04751826.1| hypothetical protein MkanA1_27896 [Mycobacterium kansasii ATCC
12478]
Length=164
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/133 (81%), Positives = 119/133 (90%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVAT+LYFLVGAAVL+AGFLMV++LTPG+LRRLVFIDRRPNAVVLA+ MY ALAIV I A
Sbjct 32 VVATILYFLVGAAVLIAGFLMVDVLTPGNLRRLVFIDRRPNAVVLASAMYAALAIVIITA 91
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I+ SS+QL QGL+ VAVYG +GVALQG ALVILEIAVPGRFREH+ P LHPA FATAVM
Sbjct 92 IHTSSSQLGQGLVDVAVYGGIGVALQGAALVILEIAVPGRFREHVAEPTLHPAAFATAVM 151
Query 121 LLAVAGVIAAALS 133
+LAV GVIAAALS
Sbjct 152 MLAVGGVIAAALS 164
>gi|118617334|ref|YP_905666.1| hypothetical protein MUL_1709 [Mycobacterium ulcerans Agy99]
gi|183982119|ref|YP_001850410.1| hypothetical protein MMAR_2105 [Mycobacterium marinum M]
gi|118569444|gb|ABL04195.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
gi|183175445|gb|ACC40555.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=156
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/133 (76%), Positives = 119/133 (90%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVA+VLYFLV A+L+ GF+MVNLLTPG+LR LVF++RRPNAVVLA +MY ALA+V I+A
Sbjct 24 VVASVLYFLVAFAILIVGFVMVNLLTPGNLRTLVFVERRPNAVVLACSMYAALALVIISA 83
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I+ SSNQL +GL+GVA+YG+VGVALQG ALV+LEIAVPGRFR+HI+A LHPA FATAVM
Sbjct 84 IFTSSNQLGEGLLGVALYGLVGVALQGAALVVLEIAVPGRFRDHIEATQLHPAAFATAVM 143
Query 121 LLAVAGVIAAALS 133
LL+V GVIAAALS
Sbjct 144 LLSVGGVIAAALS 156
>gi|41407130|ref|NP_959966.1| hypothetical protein MAP1032c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|18203156|sp|Q9K537.1|Y1032_MYCPA RecName: Full=UPF0719 transmembrane protein MAP_1032c
gi|8919147|emb|CAB96064.1| hypothetical protein [Mycobacterium avium subsp. paratuberculosis]
gi|41395481|gb|AAS03349.1| hypothetical protein MAP_1032c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461447|gb|EGO40317.1| protein of unknown function (DUF350) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=151
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/132 (63%), Positives = 103/132 (79%), Gaps = 0/132 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF VG AVL+ GF V+LLTPG LR+LVFIDRRPNAVV+A MY+AL +V I AI
Sbjct 20 VATILYFAVGMAVLLVGFYAVDLLTPGKLRQLVFIDRRPNAVVVAGAMYIALTVVIITAI 79
Query 62 YASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVML 121
S +QL QGL+GVAVYG++GV L GVAL+ + + +PG F EH++ P LHP FA A++L
Sbjct 80 ANSYSQLGQGLVGVAVYGLMGVILLGVALLAMHLLIPGSFHEHVEEPQLHPGSFAVALIL 139
Query 122 LAVAGVIAAALS 133
LAV GV AAA+S
Sbjct 140 LAVGGVTAAAVS 151
>gi|254821085|ref|ZP_05226086.1| hypothetical protein MintA_14207 [Mycobacterium intracellulare
ATCC 13950]
Length=151
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/132 (62%), Positives = 103/132 (79%), Gaps = 0/132 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF+VG AVL+ GF +V++LTPG LR LVFIDRRPNAV++A MY+AL +V I AI
Sbjct 20 VATILYFVVGMAVLLVGFYVVDVLTPGKLRHLVFIDRRPNAVIVAGAMYIALTVVIITAI 79
Query 62 YASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVML 121
S +QL QGL+GVAVYG++GV L G+AL+ + + +PG F EHID LHP FA A++L
Sbjct 80 ANSYSQLGQGLLGVAVYGLMGVILLGIALLTMHLLIPGSFHEHIDEQVLHPGSFAVALIL 139
Query 122 LAVAGVIAAALS 133
LAV GV AAA+S
Sbjct 140 LAVGGVTAAAVS 151
>gi|118465264|ref|YP_882661.1| hypothetical protein MAV_3479 [Mycobacterium avium 104]
gi|118166551|gb|ABK67448.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=151
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/132 (63%), Positives = 102/132 (78%), Gaps = 0/132 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF VG VL+ GF V+LLTPG LR+LVFIDRRPNAVV+A MY+AL V I+AI
Sbjct 20 VATILYFAVGMGVLLVGFYAVDLLTPGKLRQLVFIDRRPNAVVVAGAMYIALTAVIISAI 79
Query 62 YASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVML 121
S +QL QGL+GVAVYG++GV L GVAL+ + + +PG F EH++ P LHP FA A++L
Sbjct 80 ANSYSQLGQGLVGVAVYGLMGVILLGVALLAMHLLIPGSFHEHVEEPQLHPGSFAVALIL 139
Query 122 LAVAGVIAAALS 133
LAV GV AAA+S
Sbjct 140 LAVGGVTAAAVS 151
>gi|296170850|ref|ZP_06852411.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894506|gb|EFG74247.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=151
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/132 (60%), Positives = 103/132 (79%), Gaps = 0/132 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF VG AVL+ GF V++LTPG+LRRLVFIDRRPNAV++A MY+AL +V ++AI
Sbjct 20 VATILYFCVGMAVLLVGFYAVDVLTPGNLRRLVFIDRRPNAVIVAGAMYIALTVVIVSAI 79
Query 62 YASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVML 121
S +QL QGL+GVAVYG++GV L G+A++ + + +PG F EHI P LHP FA A++L
Sbjct 80 ANSYSQLGQGLVGVAVYGLMGVILLGIAMLAMHLLIPGSFHEHIGEPELHPGSFAVALIL 139
Query 122 LAVAGVIAAALS 133
LAV V AAA+S
Sbjct 140 LAVGCVTAAAVS 151
>gi|342858575|ref|ZP_08715230.1| hypothetical protein MCOL_06856 [Mycobacterium colombiense CECT
3035]
gi|342134279|gb|EGT87459.1| hypothetical protein MCOL_06856 [Mycobacterium colombiense CECT
3035]
Length=151
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/132 (64%), Positives = 103/132 (79%), Gaps = 0/132 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF+VG AVL+ GF V++LTPG LR+LVFIDRRPNAVV+A MY+AL V I AI
Sbjct 20 VATILYFVVGMAVLLVGFYAVDVLTPGKLRQLVFIDRRPNAVVVAGAMYIALTAVIITAI 79
Query 62 YASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVML 121
S +QL QGL+GVAVYG++GV L GVAL+ + + +PG F EHID P LHP FA A++L
Sbjct 80 ANSYSQLGQGLVGVAVYGLMGVLLLGVALLAMHLLIPGSFHEHIDEPELHPGSFAVALIL 139
Query 122 LAVAGVIAAALS 133
LAV GV AAA+S
Sbjct 140 LAVGGVTAAAVS 151
>gi|126434451|ref|YP_001070142.1| hypothetical protein Mjls_1863 [Mycobacterium sp. JLS]
gi|126234251|gb|ABN97651.1| protein of unknown function DUF350 [Mycobacterium sp. JLS]
Length=151
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/133 (67%), Positives = 108/133 (82%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVA +LYF++GA VL AGF +++LLTPG LR LVF++ RPNAV +A MY ALAIV ++A
Sbjct 19 VVAAILYFVIGALVLAAGFGLMDLLTPGSLRHLVFVEYRPNAVAVACGMYSALAIVVVSA 78
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I ASS +L QGL+ AVYGIVGV LQGVALV+LE+AVPGRFR+ I+A LHP+ ATAV+
Sbjct 79 IIASSAELGQGLLDAAVYGIVGVLLQGVALVVLEVAVPGRFRDLIEADRLHPSAIATAVV 138
Query 121 LLAVAGVIAAALS 133
LLAV GV AAALS
Sbjct 139 LLAVGGVNAAALS 151
>gi|119867966|ref|YP_937918.1| hypothetical protein Mkms_1929 [Mycobacterium sp. KMS]
gi|119694055|gb|ABL91128.1| protein of unknown function DUF350 [Mycobacterium sp. KMS]
Length=151
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/133 (67%), Positives = 108/133 (82%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVA +LYF++GA VL AGF +++LLTPG LR LVF++ RPNAV +A MY ALAIV ++A
Sbjct 19 VVAAILYFVIGALVLAAGFGLMDLLTPGSLRHLVFVEYRPNAVAVACGMYSALAIVVVSA 78
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I ASS +L QGL+ AVYGIVGV LQGVALV+LE+AVPGRFR+ I+A LHP+ AT+V+
Sbjct 79 IIASSAELGQGLLDAAVYGIVGVLLQGVALVVLEVAVPGRFRDLIEADRLHPSAIATSVV 138
Query 121 LLAVAGVIAAALS 133
LLAV GV AAALS
Sbjct 139 LLAVGGVNAAALS 151
>gi|108798851|ref|YP_639048.1| hypothetical protein Mmcs_1883 [Mycobacterium sp. MCS]
gi|108769270|gb|ABG07992.1| protein of unknown function DUF350 [Mycobacterium sp. MCS]
Length=170
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/133 (67%), Positives = 108/133 (82%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVA +LYF++GA VL AGF +++LLTPG LR LVF++ RPNAV +A MY ALAIV ++A
Sbjct 38 VVAAILYFVIGALVLAAGFGLMDLLTPGSLRHLVFVEYRPNAVAVACGMYSALAIVVVSA 97
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I ASS +L QGL+ AVYGIVGV LQGVALV+LE+AVPGRFR+ I+A LHP+ AT+V+
Sbjct 98 IIASSAELGQGLLDAAVYGIVGVLLQGVALVVLEVAVPGRFRDLIEADRLHPSAIATSVV 157
Query 121 LLAVAGVIAAALS 133
LLAV GV AAALS
Sbjct 158 LLAVGGVNAAALS 170
>gi|158316458|ref|YP_001508966.1| hypothetical protein Franean1_4693 [Frankia sp. EAN1pec]
gi|158111863|gb|ABW14060.1| protein of unknown function DUF350 [Frankia sp. EAN1pec]
Length=147
Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/133 (55%), Positives = 96/133 (73%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
+ AT+LYFLVG VL GFL+++LLTPG+LRR V++DRRPNA +L A +++L ++ + A
Sbjct 15 IAATLLYFLVGVGVLALGFLVLDLLTPGNLRRQVYVDRRPNAAILLAGNHLSLTVIVVTA 74
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ L QGL+ AVYG+VGVALQ +AL +L+ VPG R +D P L PA +A A
Sbjct 75 ILTSSDSLTQGLVDSAVYGLVGVALQALALRVLDTVVPGHLRAIVDEPTLSPAAWAVATS 134
Query 121 LLAVAGVIAAALS 133
LLA+ V AAALS
Sbjct 135 LLAIGAVNAAALS 147
>gi|121638485|ref|YP_978709.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990979|ref|YP_002645666.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121494133|emb|CAL72611.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774092|dbj|BAH26898.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602523|emb|CCC65199.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=68
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/67 (95%), Positives = 65/67 (98%), Gaps = 0/67 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
+VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA
Sbjct 1 MVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
Query 61 IYASSNQ 67
IYAS +
Sbjct 61 IYASWPR 67
>gi|229488582|ref|ZP_04382448.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229324086|gb|EEN89841.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=156
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/133 (45%), Positives = 90/133 (68%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+ T+ YF+VGAAVL GFL+++L+TPG+LR V++D+ PNA +L A+ ++ALAI+ + A
Sbjct 24 VLGTLAYFVVGAAVLATGFLVLDLMTPGNLRHQVYVDKNPNAAILLASNHLALAIIVVTA 83
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL AVYG+ + LQ +AL ++ +PG+ + P + A +A V
Sbjct 84 ILTSSDGFAQGLADSAVYGLFAIVLQAIALRLMNAFLPGKLVALVQDPKMCGAAWAVGVS 143
Query 121 LLAVAGVIAAALS 133
LL++ V AAAL+
Sbjct 144 LLSIGLVNAAALT 156
>gi|121638486|ref|YP_978710.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990980|ref|YP_002645667.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289570771|ref|ZP_06450998.1| predicted protein [Mycobacterium tuberculosis T17]
gi|121494134|emb|CAL72612.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774093|dbj|BAH26899.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289544525|gb|EFD48173.1| predicted protein [Mycobacterium tuberculosis T17]
gi|341602524|emb|CCC65200.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=59
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/59 (99%), Positives = 59/59 (100%), Gaps = 0/59 (0%)
Query 75 VAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIAAALS 133
+AVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIAAALS
Sbjct 1 MAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIAAALS 59
>gi|226308708|ref|YP_002768668.1| hypothetical protein RER_52210 [Rhodococcus erythropolis PR4]
gi|226187825|dbj|BAH35929.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=167
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/133 (44%), Positives = 89/133 (67%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+ T+ YF+VG AVL GFL+++L+TPG+LR V++D+ PNA +L A+ ++ALAI+ + A
Sbjct 35 VLGTLAYFVVGVAVLATGFLVLDLMTPGNLRHQVYVDKNPNAAILLASNHLALAIIVVTA 94
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL AVYG+ + LQ +AL ++ +PG+ + P + A +A V
Sbjct 95 ILTSSDGFAQGLADSAVYGLFAIVLQAIALRLMNAFLPGKLVALVQDPKMCGAAWAVGVS 154
Query 121 LLAVAGVIAAALS 133
LL++ V AAAL+
Sbjct 155 LLSIGLVNAAALT 167
>gi|225020604|ref|ZP_03709796.1| hypothetical protein CORMATOL_00611 [Corynebacterium matruchotii
ATCC 33806]
gi|224946550|gb|EEG27759.1| hypothetical protein CORMATOL_00611 [Corynebacterium matruchotii
ATCC 33806]
Length=160
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/131 (46%), Positives = 84/131 (65%), Gaps = 1/131 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V++T+ YF++ A+ GF++ +LLTPG R+ VF+D PNA VLA + +A+ IV AA
Sbjct 28 VISTLAYFVLSMAIFGIGFIVQDLLTPGKFRKQVFVDNLPNACVLAGSQAIAIGIVLAAA 87
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I S L QGLI AVYG VG+ LQ + LV+LE P +FR ++ L P+V + ++
Sbjct 88 ISTSPTDLVQGLIATAVYGTVGLVLQTIFLVLLEWLNPEKFRYVVEDTKLRPSVLLSGII 147
Query 121 LLAVAGVIAAA 131
L+ V GVI AA
Sbjct 148 LI-VVGVINAA 157
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (29%), Positives = 37/71 (53%), Gaps = 0/71 (0%)
Query 63 ASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLL 122
A L QG+I Y ++ +A+ G+ ++ ++ PG+FR+ + L A +
Sbjct 19 APDQPLGQGVISTLAYFVLSMAIFGIGFIVQDLLTPGKFRKQVFVDNLPNACVLAGSQAI 78
Query 123 AVAGVIAAALS 133
A+ V+AAA+S
Sbjct 79 AIGIVLAAAIS 89
>gi|254775928|ref|ZP_05217444.1| hypothetical protein MaviaA2_14830 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=98
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/79 (69%), Positives = 64/79 (82%), Gaps = 0/79 (0%)
Query 2 VATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
VAT+LYF VG AVL+ GF V+LLTPG LR+LVFIDRRPNAVV+A MY+AL +V I AI
Sbjct 20 VATILYFAVGMAVLLVGFYAVDLLTPGKLRQLVFIDRRPNAVVVAGAMYIALTVVIITAI 79
Query 62 YASSNQLAQGLIGVAVYGI 80
S +QL QGL+GVAVYG+
Sbjct 80 ANSYSQLGQGLVGVAVYGL 98
>gi|319949176|ref|ZP_08023265.1| hypothetical protein ES5_07182 [Dietzia cinnamea P4]
gi|319437162|gb|EFV92193.1| hypothetical protein ES5_07182 [Dietzia cinnamea P4]
Length=150
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/102 (55%), Positives = 72/102 (71%), Gaps = 0/102 (0%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
YF VGA VL GF+M++LLTPG LR VF+D RPNA L A ++LAI+ + + +S+
Sbjct 24 YFGVGALVLALGFVMLDLLTPGSLRHHVFVDHRPNAAALFAASAISLAIIVVTVMTNASD 83
Query 67 QLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAP 108
L GLI VAVYG++GV Q V LVILE+ VPGRFR+ + AP
Sbjct 84 SLVLGLIDVAVYGLLGVIFQAVTLVILELLVPGRFRDLVSAP 125
>gi|54025463|ref|YP_119705.1| hypothetical protein nfa34930 [Nocardia farcinica IFM 10152]
gi|54016971|dbj|BAD58341.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=141
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/127 (43%), Positives = 85/127 (67%), Gaps = 0/127 (0%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
Y VG ++V GF++V+ LTPG+LR ++++R NA VL A+ + ++ AI+ S
Sbjct 15 YTGVGLVLMVLGFVLVDALTPGNLRAQIWVERNRNAAVLVASNLFGVGVIVAMAIWTSHG 74
Query 67 QLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAG 126
L +GL+ AVYG++G+A V+ V+L++ PG+FRE + ALHPAV+ TA + +AV+
Sbjct 75 ALGEGLLACAVYGVIGLAAMAVSFVLLDLLTPGKFREVVAEQALHPAVWVTASLHVAVSL 134
Query 127 VIAAALS 133
V+AA LS
Sbjct 135 VVAAGLS 141
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/59 (33%), Positives = 36/59 (62%), Gaps = 0/59 (0%)
Query 3 ATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAI 61
A +Y ++G A + F++++LLTPG R +V AV + A+++VA+++V A +
Sbjct 82 ACAVYGVIGLAAMAVSFVLLDLLTPGKFREVVAEQALHPAVWVTASLHVAVSLVVAAGL 140
>gi|305679691|ref|ZP_07402501.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305660311|gb|EFM49808.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=160
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/131 (45%), Positives = 83/131 (64%), Gaps = 1/131 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V++T+ YF++ A+ GF++ +LLTPG R+ VF+D PNA VLA + +A+ IV AA
Sbjct 28 VISTLAYFVLSMAIFGIGFIVQDLLTPGKFRKQVFVDNLPNACVLAGSQAIAIGIVLAAA 87
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I S L GLI AVYG VG+ LQ + LV+LE P +FR ++ L P+V + ++
Sbjct 88 ISTSPTDLVAGLIATAVYGTVGLVLQTIFLVLLEWLNPEKFRYVVEDTKLRPSVLLSGII 147
Query 121 LLAVAGVIAAA 131
L+ V GVI AA
Sbjct 148 LI-VVGVINAA 157
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/71 (29%), Positives = 37/71 (53%), Gaps = 0/71 (0%)
Query 63 ASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLL 122
A L QG+I Y ++ +A+ G+ ++ ++ PG+FR+ + L A +
Sbjct 19 APDQPLGQGVISTLAYFVLSMAIFGIGFIVQDLLTPGKFRKQVFVDNLPNACVLAGSQAI 78
Query 123 AVAGVIAAALS 133
A+ V+AAA+S
Sbjct 79 AIGIVLAAAIS 89
>gi|336324737|ref|YP_004604703.1| hypothetical protein CRES_0176 [Corynebacterium resistens DSM
45100]
gi|336100719|gb|AEI08539.1| putative membrane protein [Corynebacterium resistens DSM 45100]
Length=153
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/133 (42%), Positives = 82/133 (62%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V AT+ YF++ +L F++ ++LTPGDLRR F++ PNA VL A+ +A+ +V A
Sbjct 21 VFATIAYFVLALVILGLAFVIQDILTPGDLRRQTFVEHLPNAGVLVASQVIAIGLVVATA 80
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I + L GLI VAVY +VG+ LQ + LVI+E+ VPGRFR+ + P L + T +
Sbjct 81 IATTEPDLVDGLIHVAVYSLVGLTLQSIFLVIMEVLVPGRFRDLVRDPKLRSSAVVTGIA 140
Query 121 LLAVAGVIAAALS 133
L+ V + A L+
Sbjct 141 LIVVGAINAVCLT 153
>gi|226361446|ref|YP_002779224.1| hypothetical protein ROP_20320 [Rhodococcus opacus B4]
gi|226239931|dbj|BAH50279.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=156
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/133 (44%), Positives = 87/133 (66%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
++ T+ YF+VG AVL GF +++L TPG+LR V++D+ PNA +L A+ ++ALAIV + A
Sbjct 24 MLGTLAYFVVGIAVLGVGFAVLDLATPGNLRHQVYVDKNPNAAILLASNHLALAIVVVTA 83
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL AVYG+ GV LQ +AL ++ + +PG+ + P + A +A
Sbjct 84 ILTSSDGFAQGLADSAVYGLFGVLLQVIALRLMNVLLPGQLVGLVGNPQMCGAAWAVGAS 143
Query 121 LLAVAGVIAAALS 133
L A+ V AAAL+
Sbjct 144 LFAIGLVNAAALT 156
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/38 (40%), Positives = 24/38 (64%), Gaps = 0/38 (0%)
Query 68 LAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHI 105
LA G++G Y +VG+A+ GV +L++A PG R +
Sbjct 20 LAVGMLGTLAYFVVGIAVLGVGFAVLDLATPGNLRHQV 57
>gi|111019306|ref|YP_702278.1| hypothetical protein RHA1_ro02314 [Rhodococcus jostii RHA1]
gi|110818836|gb|ABG94120.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=156
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/133 (43%), Positives = 87/133 (66%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
++ T+ YF++G AVL GF +++L TPG+LR V+ID+ PNA +L A+ ++ALA+V + A
Sbjct 24 MLGTLAYFVIGIAVLGVGFAVLDLATPGNLRHQVYIDKNPNAAILLASNHLALAVVVVTA 83
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL AVYG+ GV LQ +AL ++ + +PG+ + P + A +A
Sbjct 84 ILTSSDGFAQGLADSAVYGLFGVLLQVIALRLMNLLLPGQLVGLVGNPQMCGAAWAVGAS 143
Query 121 LLAVAGVIAAALS 133
L A+ V AAAL+
Sbjct 144 LFAIGLVNAAALT 156
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/38 (37%), Positives = 24/38 (64%), Gaps = 0/38 (0%)
Query 68 LAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHI 105
LA G++G Y ++G+A+ GV +L++A PG R +
Sbjct 20 LAVGMLGTLAYFVIGIAVLGVGFAVLDLATPGNLRHQV 57
>gi|25029104|ref|NP_739158.1| hypothetical protein CE2548 [Corynebacterium efficiens YS-314]
gi|259505898|ref|ZP_05748800.1| membrane protein [Corynebacterium efficiens YS-314]
gi|23494391|dbj|BAC19358.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166502|gb|EEW51056.1| membrane protein [Corynebacterium efficiens YS-314]
Length=144
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/132 (40%), Positives = 84/132 (64%), Gaps = 0/132 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V T+ YF++ A +LV GF++++L+TPG L LVF+ PNA V+ V++ I+ + A
Sbjct 12 VAGTLAYFVLAAVILVVGFVILDLITPGKLHELVFVHHLPNAAVITVAQQVSIGIIVVTA 71
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
+ SS+ L QGLI AV+G++G+ +Q + + +LE+ PGRFR+ ++ P L +V+
Sbjct 72 VLTSSDNLTQGLIETAVFGVLGLVIQVIVMALLEVFTPGRFRDLVEDPKLRSGAVVASVL 131
Query 121 LLAVAGVIAAAL 132
L+ V V AA L
Sbjct 132 LVVVGAVNAACL 143
>gi|213965129|ref|ZP_03393327.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952243|gb|EEB63627.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=173
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/131 (41%), Positives = 81/131 (62%), Gaps = 0/131 (0%)
Query 3 ATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIY 62
AT+ YFL GA VLV GF++++L+TPG LR LVF++ R A ++A + +ALA + ++ I
Sbjct 43 ATIGYFLAGALVLVVGFIVLDLITPGKLRDLVFLENRAGAAMIAGSQQIALACIVVSVIR 102
Query 63 ASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLL 122
AS + L GL VYG +G+ LQ +L++LE +PGRFR+ + + P A +
Sbjct 103 ASDDDLMMGLGETLVYGALGIVLQAASLLVLEALIPGRFRDVVMDAKVRPRAMLAATTFI 162
Query 123 AVAGVIAAALS 133
+ + A ALS
Sbjct 163 VIGVINAVALS 173
>gi|295395546|ref|ZP_06805740.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294971565|gb|EFG47446.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
Length=141
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (38%), Positives = 84/127 (67%), Gaps = 0/127 (0%)
Query 6 LYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASS 65
+Y ++G +++AGF +V+LLTPG LR L++ +R NA +L + + ++I+ AAIYAS+
Sbjct 14 MYAVIGLLLMMAGFFIVDLLTPGKLRTLLWEERSKNAALLVGSKALGVSIIVCAAIYASA 73
Query 66 NQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVA 125
+ L GL+ VYG++G+ + V+ +++++ PG+ + + P LHPA + +A L VA
Sbjct 74 HDLLAGLVSTLVYGVMGIIVMAVSFLLIDLFTPGKLGDLVHDPELHPATWVSAATHLGVA 133
Query 126 GVIAAAL 132
+I+ AL
Sbjct 134 LIISVAL 140
>gi|19553896|ref|NP_601898.1| hypothetical protein NCgl2609 [Corynebacterium glutamicum ATCC
13032]
gi|62391539|ref|YP_226941.1| hypothetical protein cg2991 [Corynebacterium glutamicum ATCC
13032]
gi|41326881|emb|CAF20725.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length=141
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 75/110 (69%), Gaps = 0/110 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+ T+ YF++ A +LV GF++++L+TPG L LVF+ PNA V+ V++ I+ + A
Sbjct 9 VLGTLSYFVLAAVILVVGFVILDLITPGKLHELVFVHHLPNAAVITVAQQVSIGIIVVTA 68
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPAL 110
+ SS+ L++GL+ AV+G +G+ +Q V + +LE +PGRFR+ ++ P L
Sbjct 69 VLTSSDILSEGLLETAVFGALGLVIQVVVMAVLEAVIPGRFRDLVEDPKL 118
>gi|145296699|ref|YP_001139520.1| hypothetical protein cgR_2604 [Corynebacterium glutamicum R]
gi|140846619|dbj|BAF55618.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344046235|gb|EGV41901.1| hypothetical protein CgS9114_00750 [Corynebacterium glutamicum
S9114]
Length=141
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/110 (40%), Positives = 74/110 (68%), Gaps = 0/110 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+ T+ YF++ +LV GF++++L+TPG L LVF+ PNA V+ V++ I+ + A
Sbjct 9 VIGTLSYFVLATVILVVGFVILDLITPGKLHELVFVHHLPNAAVITVAQQVSIGIIVVTA 68
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPAL 110
+ SS+ L++GL+ AV+G +G+ +Q V + +LE +PGRFR+ ++ P L
Sbjct 69 VLTSSDILSEGLLETAVFGALGLVIQVVVMAVLEAVIPGRFRDLVEDPKL 118
>gi|227506041|ref|ZP_03936090.1| hypothetical membrane protein [Corynebacterium striatum ATCC
6940]
gi|227197323|gb|EEI77371.1| hypothetical membrane protein [Corynebacterium striatum ATCC
6940]
Length=132
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/133 (43%), Positives = 83/133 (63%), Gaps = 5/133 (3%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
++AT YF V A +L+AGF++++LLTPG L R VF+D NA V+A+ +AL V + +
Sbjct 5 ILATFAYFGVAAVLLLAGFVVLDLLTPGKLYRAVFVDHHVNAAVIASAQQIALGAVLVTS 64
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I S + L+ AVYG+VG+ LQ +ALVILE +PGRFR+ ++ F V+
Sbjct 65 IVHSFD-----LLETAVYGLVGIVLQALALVILEALIPGRFRDLVEDTKPRAGAFCAGVI 119
Query 121 LLAVAGVIAAALS 133
LL V + AA L+
Sbjct 120 LLVVGVINAACLT 132
>gi|21325475|dbj|BAC00097.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
13032]
Length=133
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/108 (40%), Positives = 73/108 (68%), Gaps = 0/108 (0%)
Query 3 ATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIY 62
T+ YF++ A +LV GF++++L+TPG L LVF+ PNA V+ V++ I+ + A+
Sbjct 3 GTLSYFVLAAVILVVGFVILDLITPGKLHELVFVHHLPNAAVITVAQQVSIGIIVVTAVL 62
Query 63 ASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPAL 110
SS+ L++GL+ AV+G +G+ +Q V + +LE +PGRFR+ ++ P L
Sbjct 63 TSSDILSEGLLETAVFGALGLVIQVVVMAVLEAVIPGRFRDLVEDPKL 110
>gi|325677006|ref|ZP_08156677.1| hypothetical protein HMPREF0724_14460 [Rhodococcus equi ATCC
33707]
gi|325552168|gb|EGD21859.1| hypothetical protein HMPREF0724_14460 [Rhodococcus equi ATCC
33707]
Length=168
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/133 (48%), Positives = 87/133 (66%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+AT+ +F VG AVL AGF M++ LTPG+LR V++++ PNA +L ++ALAI+ + A
Sbjct 36 VLATLAFFAVGVAVLAAGFAMLDALTPGNLRHQVYVEKNPNAALLLGANHLALAIIVVTA 95
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL VYG+VGV LQ AL I+ + +PGR + P + A +A AV
Sbjct 96 ILTSSDGFAQGLADSLVYGVVGVVLQAAALAIMNVLLPGRLVALVGEPRMCGAAWAVAVT 155
Query 121 LLAVAGVIAAALS 133
L +V V AAALS
Sbjct 156 LFSVGLVNAAALS 168
>gi|312140247|ref|YP_004007583.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889586|emb|CBH48903.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=156
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/133 (48%), Positives = 86/133 (65%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
V+AT+ +F VG AVL AGF M++ LTPG+LR V++ + PNA +L ++ALAI+ + A
Sbjct 24 VLATLAFFAVGVAVLAAGFAMLDALTPGNLRHQVYVAKNPNAALLLGANHLALAIIVVTA 83
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I SS+ AQGL VYG+VGV LQ AL I+ + +PGR + P + A +A AV
Sbjct 84 ILTSSDGFAQGLADSLVYGVVGVVLQAAALAIMNVLLPGRLVALVGEPRMCGAAWAVAVT 143
Query 121 LLAVAGVIAAALS 133
L +V V AAALS
Sbjct 144 LFSVGLVNAAALS 156
>gi|291298391|ref|YP_003509669.1| hypothetical protein Snas_0865 [Stackebrandtia nassauensis DSM
44728]
gi|290567611|gb|ADD40576.1| protein of unknown function DUF350 [Stackebrandtia nassauensis
DSM 44728]
Length=141
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/124 (41%), Positives = 82/124 (67%), Gaps = 0/124 (0%)
Query 10 VGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSNQLA 69
VG ++V GF++V+++TPG+LR+ ++++R NA VL A+ +A+ ++ AAI ASS+ L
Sbjct 18 VGIVLMVLGFVLVDVITPGNLRKQIWLERNRNATVLLASNLLAVGMIVFAAISASSDNLV 77
Query 70 QGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIA 129
G+ VYG++G+ + GVA V+L++ PG+ + HPAV+ TA +AVA V+
Sbjct 78 VGISYSFVYGVIGLIVMGVAFVLLDLLTPGKLGAILVEENNHPAVWVTAATHIAVALVVM 137
Query 130 AALS 133
A LS
Sbjct 138 AGLS 141
>gi|134097070|ref|YP_001102731.1| hypothetical protein SACE_0457 [Saccharopolyspora erythraea NRRL
2338]
gi|291006989|ref|ZP_06564962.1| hypothetical protein SeryN2_20918 [Saccharopolyspora erythraea
NRRL 2338]
gi|133909693|emb|CAL99805.1| hypothetical protein SACE_0457 [Saccharopolyspora erythraea NRRL
2338]
Length=141
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/132 (32%), Positives = 83/132 (63%), Gaps = 0/132 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
++A V Y ++G ++ G+++V+L TPG LR L+++ R PNA +L + + ++ A
Sbjct 9 LLAAVAYGVIGVLMMALGYVLVDLATPGRLRDLIWVQRNPNAALLLVSGLTGVGVILTTA 68
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
I AS++ L GL+G YG++G+ L ++ ++++ PG+ + + +P +HP + +AV
Sbjct 69 IAASADDLIAGLVGTLAYGLLGLVLMSLSFLLIDALTPGKLGDELASPNMHPGTWVSAVA 128
Query 121 LLAVAGVIAAAL 132
+ ++ +IAAA+
Sbjct 129 HVVISVLIAAAI 140
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (63%), Gaps = 0/40 (0%)
Query 66 NQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHI 105
+L GL+ YG++GV + + V++++A PGR R+ I
Sbjct 3 QELLSGLLAAVAYGVIGVLMMALGYVLVDLATPGRLRDLI 42
>gi|84494839|ref|ZP_00993958.1| hypothetical protein JNB_08574 [Janibacter sp. HTCC2649]
gi|84384332|gb|EAQ00212.1| hypothetical protein JNB_08574 [Janibacter sp. HTCC2649]
Length=142
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/124 (39%), Positives = 78/124 (63%), Gaps = 0/124 (0%)
Query 10 VGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSNQLA 69
VG ++ AG+ +V+ LTPG LR L++ R NA +L ++ +A+AI+ + AI +S + LA
Sbjct 19 VGLLLMAAGYGVVDALTPGSLRELIWDKRNGNAALLLSSNMLAVAIIVVTAIRSSYDGLA 78
Query 70 QGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIA 129
GLI AVYG++G+ + V V+++ PGR + + HPA + A L+VA ++A
Sbjct 79 HGLISTAVYGLLGLVIMAVFFVVIDAFTPGRLGDLVTDQERHPAAWVGASSHLSVALIVA 138
Query 130 AALS 133
AA+S
Sbjct 139 AAIS 142
>gi|326328865|ref|ZP_08195199.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
gi|325953350|gb|EGD45356.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
Length=140
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (34%), Positives = 81/133 (61%), Gaps = 0/133 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
+++TV + +G +LV GF +++LLTPG L +L+F++ R + +L + +A+A + +
Sbjct 8 LLSTVAFAALGLVLLVIGFYVIDLLTPGKLGQLIFVEHRRDPALLLGSSVLAIATIVATS 67
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVM 120
IY + QGL A YG++G+AL VA VIL++ PGR E + PA++ +
Sbjct 68 IYTAEADTFQGLAETAAYGLIGIALLAVAFVILDLLTPGRLGELMTDDKDDPAIWVAVAV 127
Query 121 LLAVAGVIAAALS 133
L+V ++AA+++
Sbjct 128 QLSVGVIVAASIT 140
>gi|72162634|ref|YP_290291.1| hypothetical protein Tfu_2235 [Thermobifida fusca YX]
gi|71916366|gb|AAZ56268.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=140
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/115 (40%), Positives = 74/115 (65%), Gaps = 0/115 (0%)
Query 1 VVATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAA 60
VVA + Y +VG A++ G+L+V+LLTPG L L++ +R NA ++ A+ + +AIV A
Sbjct 8 VVACLAYGVVGIALMALGYLIVDLLTPGKLHELIWTNRNRNATLIVASNTLGVAIVVSTA 67
Query 61 IYASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVF 115
I AS+N LA GL+ VYG+VG+ L ++ +++++ PG+ + LHPA +
Sbjct 68 IAASANDLAAGLVTTVVYGLVGLLLMALSFLLIDLLTPGKLGSIVAENELHPAAW 122
>gi|328886720|emb|CCA59959.1| probable conserved integral membrane protein [Streptomyces venezuelae
ATCC 10712]
Length=140
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/127 (30%), Positives = 78/127 (62%), Gaps = 0/127 (0%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
Y +G +L+ G ++V+LLTPG L R ++ DR NA +L ++ + + + +I+ + +
Sbjct 14 YGALGVVLLILGIVLVDLLTPGKLGRQIWEDRNRNAAILLSSALLGIGGIVFTSIWTTYD 73
Query 67 QLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAG 126
+GL+ A +G++G+ + VA +++++ PG+ + P HPAV+ TA +AV+
Sbjct 74 NFGKGLVSTAAFGLLGLVMMAVAFLVVDLVTPGKLGATLVDPQPHPAVWVTASCNIAVSA 133
Query 127 VIAAALS 133
+++A+++
Sbjct 134 IVSASIA 140
>gi|262200709|ref|YP_003271917.1| hypothetical protein Gbro_0702 [Gordonia bronchialis DSM 43247]
gi|262084056|gb|ACY20024.1| protein of unknown function DUF350 [Gordonia bronchialis DSM
43247]
Length=143
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (37%), Positives = 76/123 (62%), Gaps = 0/123 (0%)
Query 10 VGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSNQLA 69
VG +++ F +V++LTPGDLRR ++ DR NA +L + A+A++ AAI+AS +LA
Sbjct 20 VGIFLMLVSFAVVDVLTPGDLRRQLWADRNRNAGILVGSNLFAVALIVTAAIFASEGRLA 79
Query 70 QGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIA 129
GL +Y ++G+A + V++++ P + E + P HPAV+ V + VA +IA
Sbjct 80 VGLTFTVIYTLIGLAAMILTFVVIDLFTPSKLGELVIDPQPHPAVWVHGVAHVGVALIIA 139
Query 130 AAL 132
A++
Sbjct 140 ASI 142
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/59 (38%), Positives = 38/59 (65%), Gaps = 2/59 (3%)
Query 4 TVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPN-AVVLAATMYVALAIVTIAAI 61
TV+Y L+G A ++ F++++L TP L LV ID +P+ AV + +V +A++ A+I
Sbjct 85 TVIYTLIGLAAMILTFVVIDLFTPSKLGELV-IDPQPHPAVWVHGVAHVGVALIIAASI 142
>gi|152966708|ref|YP_001362492.1| hypothetical protein Krad_2756 [Kineococcus radiotolerans SRS30216]
gi|151361225|gb|ABS04228.1| protein of unknown function DUF350 [Kineococcus radiotolerans
SRS30216]
Length=138
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/127 (38%), Positives = 74/127 (59%), Gaps = 1/127 (0%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
Y LVG A+LV GF++++LLTPG L +++ R NA V+ + ++ L +V AAI+ +
Sbjct 11 YSLVGMALLVVGFVVLDLLTPGKLAEQIWVHRSANAAVVVSCGFIGLGLVVFAAIWTNGE 70
Query 67 -QLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVA 125
L L +G++GV LQ +A +LE+ PGR R+ + A LHP LAV+
Sbjct 71 ASLGSALGWTVAFGLLGVLLQALAGAVLELLTPGRMRDVLVARELHPGSVVLGAAQLAVS 130
Query 126 GVIAAAL 132
V+ A++
Sbjct 131 FVVVASI 137
>gi|315500971|ref|YP_004079858.1| hypothetical protein ML5_0154 [Micromonospora sp. L5]
gi|315407590|gb|ADU05707.1| protein of unknown function DUF350 [Micromonospora sp. L5]
Length=140
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/120 (36%), Positives = 75/120 (63%), Gaps = 0/120 (0%)
Query 4 TVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYA 63
T+ Y +VG ++ G+++V++ TPG L L++++R NA +L ++ + + + +AAI A
Sbjct 11 TLAYGVVGVVLMAIGYVLVDVATPGKLHELIWVERNRNAALLLSSNLLGVGTIVVAAIVA 70
Query 64 SSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLA 123
S + GLIG YGI+G+ + A V+L++A PG+ E + P HPAV+ +A + LA
Sbjct 71 SDDDFTLGLIGAGAYGILGLVIMAAAFVLLDVATPGKLGELLVDPEPHPAVWVSATVHLA 130
>gi|302864678|ref|YP_003833315.1| hypothetical protein Micau_0170 [Micromonospora aurantiaca ATCC
27029]
gi|302567537|gb|ADL43739.1| protein of unknown function DUF350 [Micromonospora aurantiaca
ATCC 27029]
Length=140
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/120 (37%), Positives = 74/120 (62%), Gaps = 0/120 (0%)
Query 4 TVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYA 63
T+ Y VG ++ G+++V+L TPG L L++ +R NA +L ++ + + + +AAI A
Sbjct 11 TLAYGAVGVVLMAIGYVLVDLATPGKLHDLIWTERNRNAALLLSSNLLGVGTIVVAAIVA 70
Query 64 SSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLA 123
S + GL+G A YGI+G+ + A V+L++A PG+ E + P HPAV+ +A + LA
Sbjct 71 SDDDFTLGLVGAAAYGILGLVIMAAAFVLLDVATPGKLGELLVDPEPHPAVWVSATVHLA 130
>gi|54026141|ref|YP_120383.1| hypothetical protein nfa41700 [Nocardia farcinica IFM 10152]
gi|54017649|dbj|BAD59019.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=149
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/123 (43%), Positives = 80/123 (66%), Gaps = 6/123 (4%)
Query 3 ATVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIY 62
A +LY +VG A+++ GF V+L TPG LRRLV + +PNA+++ A V++A + + AIY
Sbjct 20 AILLYAVVGLALMLVGFYAVDLSTPGQLRRLV-AEGKPNAIIVTAAGLVSMAFIVVLAIY 78
Query 63 ASSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLL 122
+S+ +LA+GLI V+G+VG+ Q V++ +LE A F I A ALH T V+++
Sbjct 79 SSAGKLAEGLIAALVFGLVGIVAQIVSVRVLERA----FGIDIGA-ALHSETRTTEVLVV 133
Query 123 AVA 125
A A
Sbjct 134 AAA 136
>gi|297564088|ref|YP_003683061.1| protein of unknown function DUF350 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848537|gb|ADH70555.1| protein of unknown function DUF350 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=142
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (36%), Positives = 70/114 (62%), Gaps = 2/114 (1%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
Y VG +LV G+L+ +LLTPG L L++ +R NAV+L + + AIV +AI +S +
Sbjct 14 YGGVGIVILVLGYLLTDLLTPGKLHVLIWENRNRNAVLLVSANTLGSAIVVTSAILSSES 73
Query 67 Q--LAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATA 118
+ L GL+ AVYG++G+ + ++ V++++ VP + + I HPA + +A
Sbjct 74 EIGLGAGLLSTAVYGLIGLGVMALSFVLIDLLVPAKIAQMISNDEPHPATWVSA 127
>gi|238062037|ref|ZP_04606746.1| hypothetical protein MCAG_03003 [Micromonospora sp. ATCC 39149]
gi|237883848|gb|EEP72676.1| hypothetical protein MCAG_03003 [Micromonospora sp. ATCC 39149]
Length=140
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/122 (37%), Positives = 73/122 (60%), Gaps = 0/122 (0%)
Query 4 TVLYFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYA 63
T+ Y +VG ++ G+ +V++ TPG L L++ +R NA +L ++ + + + +AAI A
Sbjct 11 TLAYGMVGVVLMGVGYGLVDVATPGKLHELIWTERNRNAALLLSSNLLGVGTIVVAAILA 70
Query 64 SSNQLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLA 123
S + GL+G A YGIVG+ + A ++L+ PGR E + P HPAV+ +AV+ LA
Sbjct 71 SEDDFVIGLVGAAAYGIVGLVIMAAAFLLLDAVTPGRLGELLVDPEPHPAVWVSAVVHLA 130
Query 124 VA 125
Sbjct 131 TG 132
>gi|260905323|ref|ZP_05913645.1| hypothetical protein BlinB_08343 [Brevibacterium linens BL2]
Length=141
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/126 (37%), Positives = 80/126 (64%), Gaps = 0/126 (0%)
Query 7 YFLVGAAVLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSN 66
Y + G A+++ G+ +V+LLTPG L +++ + NAV+L A+ + +AI+ IAAI AS++
Sbjct 15 YAVSGLALMLIGYFVVDLLTPGKLHVILWQQKSKNAVILVASDLLCVAIIVIAAIRASAD 74
Query 67 QLAQGLIGVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAG 126
G+I V+GIVG+ L ++ ++++ PG+ + I A HP V+ A + +AG
Sbjct 75 DFVFGIISTLVFGIVGIILMALSFLLIDAFTPGKLGDMIKPDAFHPEVWVNASAHVGIAG 134
Query 127 VIAAAL 132
++AAAL
Sbjct 135 IMAAAL 140
>gi|343925478|ref|ZP_08764997.1| hypothetical protein GOALK_046_00160 [Gordonia alkanivorans NBRC
16433]
gi|343764570|dbj|GAA11923.1| hypothetical protein GOALK_046_00160 [Gordonia alkanivorans NBRC
16433]
Length=141
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/119 (36%), Positives = 70/119 (59%), Gaps = 0/119 (0%)
Query 14 VLVAGFLMVNLLTPGDLRRLVFIDRRPNAVVLAATMYVALAIVTIAAIYASSNQLAQGLI 73
+++ F +V+LLTPG LR ++ +R NA +L + A+AI+ AAI AS +L +GL
Sbjct 22 LMILSFAIVDLLTPGKLRHQLWAERNRNAGILVGSNLFAVAIIVTAAIVASEGRLLEGLT 81
Query 74 GVAVYGIVGVALQGVALVILEIAVPGRFREHIDAPALHPAVFATAVMLLAVAGVIAAAL 132
VY +G+ + V ++++ PG+ E + P HPAV+ V + VA +IAA++
Sbjct 82 YTVVYSAIGLIVMSVTFLVIDALTPGKLGEILVNPESHPAVWVQGVAHIGVAVIIAASI 140
Lambda K H
0.330 0.142 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130457467840
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40