BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2601A

Length=95
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842141|ref|NP_337178.1|  hypothetical protein MT2676 [Mycoba...   192    1e-47
gi|344220429|gb|AEN01060.1|  hypothetical protein MTCTRI2_2650 [M...   191    4e-47
gi|340627619|ref|YP_004746071.1|  hypothetical protein MCAN_26441...   189    1e-46
gi|333967819|gb|AEG34583.1|  hypothetical protein Ththe16_2214 [T...  50.1    1e-04
gi|33864608|ref|NP_896167.1|  hypothetical protein SYNW0072 [Syne...  46.2    0.002
gi|320108461|ref|YP_004184051.1|  hypothetical protein AciPR4_330...  45.4    0.003
gi|87123267|ref|ZP_01079118.1|  hypothetical protein RS9917_05390...  44.7    0.004
gi|296130775|ref|YP_003638025.1|  putative transcriptional regula...  42.4    0.022
gi|171061002|ref|YP_001793351.1|  plasmid stability protein StbC ...  42.0    0.033
gi|254430625|ref|ZP_05044328.1|  conserved hypothetical protein [...  41.2    0.050
gi|336179655|ref|YP_004585030.1|  hypothetical protein FsymDg_383...  40.8    0.069
gi|320449409|ref|YP_004201505.1|  hypothetical protein TSC_c03170...  40.4    0.096
gi|121636191|ref|YP_976414.1|  antitoxin [Mycobacterium bovis BCG...  40.0    0.12 
gi|87300558|ref|ZP_01083400.1|  hypothetical protein WH5701_03900...  39.3    0.18 
gi|87123275|ref|ZP_01079126.1|  hypothetical protein RS9917_05430...  38.5    0.35 
gi|68535082|ref|YP_249787.1|  hypothetical protein jk0020 [Coryne...  38.5    0.38 
gi|157382509|gb|ABV48745.1|  Rv2871 [Mycobacterium kansasii ATCC ...  38.5    0.38 
gi|317967918|ref|ZP_07969308.1|  hypothetical protein SCB02_00122...  38.5    0.39 
gi|86738905|ref|YP_479305.1|  hypothetical protein Francci3_0184 ...  38.1    0.40 
gi|160898240|ref|YP_001563822.1|  antitoxin [Delftia acidovorans ...  37.7    0.51 
gi|255324694|ref|ZP_05365808.1|  conserved hypothetical protein [...  37.7    0.52 
gi|15840019|ref|NP_335056.1|  hypothetical protein MT0645.2 [Myco...  37.4    0.75 
gi|289749257|ref|ZP_06508635.1|  conserved hypothetical protein [...  37.4    0.78 
gi|332321844|sp|P0CW33.1|VPB25_MYCTU  RecName: Full=Antitoxin VapB25  37.0    0.93 
gi|163783444|ref|ZP_02178436.1|  hypothetical protein HG1285_1345...  37.0    1.1  
gi|322433889|ref|YP_004216101.1|  hypothetical protein AciX9_0247...  36.6    1.2  
gi|318041772|ref|ZP_07973728.1|  hypothetical protein SCB01_08684...  36.6    1.3  
gi|240171735|ref|ZP_04750394.1|  hypothetical protein MkanA1_2064...  36.6    1.3  
gi|15610008|ref|NP_217387.1|  hypothetical protein Rv2871 [Mycoba...  36.6    1.3  
gi|238897495|ref|YP_002923174.1|  addiction module [Candidatus Ha...  36.6    1.3  
gi|258593475|emb|CBE69814.1|  conserved protein of unknown functi...  36.6    1.4  
gi|254551940|ref|ZP_05142387.1|  antitoxin [Mycobacterium tubercu...  36.6    1.4  
gi|294054234|ref|YP_003547892.1|  hypothetical protein Caka_0698 ...  36.6    1.4  
gi|113954589|ref|YP_729373.1|  hypothetical protein sync_0136 [Sy...  36.2    1.7  
gi|288932167|ref|YP_003436227.1|  hypothetical protein Ferp_1809 ...  35.8    1.9  
gi|75911078|ref|YP_325374.1|  helix-turn-helix protein CopG [Anab...  35.8    2.1  
gi|45657965|ref|YP_002051.1|  hypothetical protein LIC12117 [Lept...  35.8    2.2  
gi|300311537|ref|YP_003775629.1|  plasmid stabilization protein [...  35.8    2.5  
gi|15607888|ref|NP_215262.1|  hypothetical protein Rv0748 [Mycoba...  35.4    3.0  
gi|304311488|ref|YP_003811086.1|  Putative plasmid stabilization ...  35.4    3.1  
gi|294827927|ref|NP_711849.2|  hypothetical protein LA_1668 [Lept...  35.4    3.2  
gi|257056357|ref|YP_003134189.1|  hypothetical protein Svir_23560...  35.0    3.4  
gi|190606549|ref|YP_001974834.1|  hypothetical protein -pVEF3_p65...  35.0    3.5  
gi|15840161|ref|NP_335198.1|  hypothetical protein MT0772.6 [Myco...  35.0    3.5  
gi|257868361|ref|ZP_05648014.1|  predicted protein [Enterococcus ...  35.0    3.7  
gi|296444717|ref|ZP_06886680.1|  conserved hypothetical protein [...  35.0    3.7  
gi|240169387|ref|ZP_04748046.1|  hypothetical protein MkanA1_0874...  35.0    3.8  
gi|254250235|ref|ZP_04943555.1|  Plasmid stability protein-like [...  35.0    3.9  
gi|163868767|ref|YP_001609991.1|  hypothetical protein Btr_1680 [...  35.0    4.2  
gi|16265087|ref|NP_437879.1|  plasmid stability protein [Sinorhiz...  35.0    4.2  


>gi|15842141|ref|NP_337178.1| hypothetical protein MT2676 [Mycobacterium tuberculosis CDC1551]
 gi|31793786|ref|NP_856279.1| hypothetical protein Mb2633 [Mycobacterium bovis AF2122/97]
 gi|57117004|ref|YP_177673.1| hypothetical protein Rv2601A [Mycobacterium tuberculosis H37Rv]
 74 more sequence titles
 Length=95

 Score =  192 bits (489),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60

Query  61  GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL  95
           GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL
Sbjct  61  GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL  95


>gi|344220429|gb|AEN01060.1| hypothetical protein MTCTRI2_2650 [Mycobacterium tuberculosis 
CTRI-2]
Length=95

 Score =  191 bits (484),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 94/95 (99%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL QTHSGAPIPTPRRVQLPLVHC
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLFQTHSGAPIPTPRRVQLPLVHC  60

Query  61  GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL  95
           GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL
Sbjct  61  GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL  95


>gi|340627619|ref|YP_004746071.1| hypothetical protein MCAN_26441 [Mycobacterium canettii CIPT 
140010059]
 gi|340005809|emb|CCC44975.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=95

 Score =  189 bits (480),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 93/95 (98%), Positives = 93/95 (98%), Gaps = 0/95 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC
Sbjct  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60

Query  61  GGAATREQEMTPERVAAALLDQEAQWWSGHDDAAL  95
            GA TREQEMTPERVAAALLDQEAQWWSGHDDAAL
Sbjct  61  SGATTREQEMTPERVAAALLDQEAQWWSGHDDAAL  95


>gi|333967819|gb|AEG34583.1| hypothetical protein Ththe16_2214 [Thermus thermophilus SG0.5JP17-16]
Length=80

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 35/51 (69%), Gaps = 0/51 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPR  51
           M+TTLDLPD L R +K++AA++G+ ++++V   L  GL +  S  P P PR
Sbjct  1   MRTTLDLPDPLYRRLKLQAAREGKTLRELVIRYLEEGLRRGGSPGPRPLPR  51


>gi|33864608|ref|NP_896167.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
 gi|33632131|emb|CAE06587.1| hypothetical protein SYNW0072 [Synechococcus sp. WH 8102]
Length=102

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 36/106 (34%), Positives = 48/106 (46%), Gaps = 18/106 (16%)

Query  1    MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTH-SGAP------------I  47
            MKTT+DLPD L++  K RA QQ R +KD++ + +R GL  T  S  P            +
Sbjct  1    MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGLKGTSLSAMPAASSLVETDATGL  60

Query  48   PTPRRVQLPLVH-CGGAATREQEMTPERVAAALLDQEAQWWSGHDD  92
            P  R    P VH    A   EQ++    +    L     W  GH D
Sbjct  61   PLIRSTSAPTVHTVPNALQLEQDL----LQTHELTDHHTWDDGHPD  102


>gi|320108461|ref|YP_004184051.1| hypothetical protein AciPR4_3303 [Terriglobus saanensis SP1PR4]
 gi|319926982|gb|ADV84057.1| hypothetical protein AciPR4_3303 [Terriglobus saanensis SP1PR4]
Length=75

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 23/70 (33%), Positives = 42/70 (60%), Gaps = 3/70 (4%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+D+PD   R +KV+AA++GR +K ++ + +++ L+      P    R+++LPL+  
Sbjct  1   MRTTVDIPDAEYRLLKVKAAEEGRTIKQLIHDGVKAVLACEKEKKPF---RKMKLPLIKS  57

Query  61  GGAATREQEM  70
               T   EM
Sbjct  58  KNPGTLTTEM  67


>gi|87123267|ref|ZP_01079118.1| hypothetical protein RS9917_05390 [Synechococcus sp. RS9917]
 gi|86168987|gb|EAQ70243.1| hypothetical protein RS9917_05390 [Synechococcus sp. RS9917]
Length=102

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 21/44 (48%), Positives = 29/44 (66%), Gaps = 0/44 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSG  44
           MKTT+DLPD L++  K RA QQ R +KD++ + +R GL     G
Sbjct  1   MKTTIDLPDALIQQAKQRALQQKRTLKDLIADYIRQGLKGPSCG  44


>gi|296130775|ref|YP_003638025.1| putative transcriptional regulator, CopG family [Cellulomonas 
flavigena DSM 20109]
 gi|296022590|gb|ADG75826.1| putative transcriptional regulator, CopG family [Cellulomonas 
flavigena DSM 20109]
Length=83

 Score = 42.4 bits (98),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 24/54 (45%), Positives = 33/54 (62%), Gaps = 1/54 (1%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQ  54
           M+TTL LPDEL R +K  AA+ GR +  VV + LR+ L +  + A  P P R+ 
Sbjct  5   MRTTLHLPDELYREVKAAAARSGRTVTSVVEDALRAELERFRATAERP-PFRID  57


>gi|171061002|ref|YP_001793351.1| plasmid stability protein StbC [Leptothrix cholodnii SP-6]
 gi|170778447|gb|ACB36586.1| plasmid stability protein StbC [Leptothrix cholodnii SP-6]
Length=84

 Score = 42.0 bits (97),  Expect = 0.033, Method: Compositional matrix adjust.
 Identities = 20/39 (52%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           M T  +LPDE+ RA++VRAAQ G  M+  V E+L S +S
Sbjct  3   MLTVRNLPDEVHRALRVRAAQHGHSMESEVREILESAVS  41


>gi|254430625|ref|ZP_05044328.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
 gi|197625078|gb|EDY37637.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length=79

 Score = 41.2 bits (95),  Expect = 0.050, Method: Compositional matrix adjust.
 Identities = 20/46 (44%), Positives = 27/46 (59%), Gaps = 0/46 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAP  46
           M+TTL+LPD L   +K RA  QG  +K ++   +  GLS    GAP
Sbjct  1   MRTTLELPDPLFARLKARAVSQGVTLKALLRSYVEQGLSAAPDGAP  46


>gi|336179655|ref|YP_004585030.1| hypothetical protein FsymDg_3832 [Frankia symbiont of Datisca 
glomerata]
 gi|334860635|gb|AEH11109.1| hypothetical protein, antitoxin [Frankia symbiont of Datisca 
glomerata]
Length=84

 Score = 40.8 bits (94),  Expect = 0.069, Method: Compositional matrix adjust.
 Identities = 25/67 (38%), Positives = 34/67 (51%), Gaps = 1/67 (1%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+DL D+L R     A    R + D V +L+R GL Q+   A +    R  LP+V  
Sbjct  1   MRTTIDLSDDLHRQALSIARGTRRTLSDTVADLIRRGLGQS-GAAEVSRSERTGLPVVRL  59

Query  61  GGAATRE  67
           G   T E
Sbjct  60  GTVITSE  66


>gi|320449409|ref|YP_004201505.1| hypothetical protein TSC_c03170 [Thermus scotoductus SA-01]
 gi|320149578|gb|ADW20956.1| hypothetical protein TSC_c03170 [Thermus scotoductus SA-01]
Length=75

 Score = 40.4 bits (93),  Expect = 0.096, Method: Compositional matrix adjust.
 Identities = 18/51 (36%), Positives = 31/51 (61%), Gaps = 0/51 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPR  51
           M+ TLDLPD L R +K++AA++G+ ++++V   L  G+         P P+
Sbjct  1   MRITLDLPDPLYRHLKLQAAKEGKTLRELVIRYLEEGMRHQAQRQSRPLPK  51


>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=85

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 25/88 (29%), Positives = 45/88 (52%), Gaps = 5/88 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+ + DEL+   K RA ++G+ +  V+ + LR  L+   +G   PT     +P+   
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPT-----VPVFDA  55

Query  61  GGAATREQEMTPERVAAALLDQEAQWWS  88
           G       ++T  RV + +LD+  +  S
Sbjct  56  GTGPRPGIDLTSNRVLSEVLDEGLELNS  83


>gi|87300558|ref|ZP_01083400.1| hypothetical protein WH5701_03900 [Synechococcus sp. WH 5701]
 gi|87284429|gb|EAQ76381.1| hypothetical protein WH5701_03900 [Synechococcus sp. WH 5701]
Length=95

 Score = 39.3 bits (90),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 20/45 (45%), Positives = 28/45 (63%), Gaps = 0/45 (0%)

Query  5   LDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPT  49
           +DLPD L+R  K RA QQG  +K++V + +  GL    SG+  PT
Sbjct  1   MDLPDHLVRQAKQRALQQGLTLKELVADYISQGLHGGASGSVPPT  45


>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
 gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82

 Score = 38.5 bits (88),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 20/42 (48%), Positives = 27/42 (65%), Gaps = 0/42 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTH  42
           M+TTLD+ D+L++A K  A QQ      VV+ LLR  L+Q H
Sbjct  1   MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQALTQAH  42


>gi|68535082|ref|YP_249787.1| hypothetical protein jk0020 [Corynebacterium jeikeium K411]
 gi|68535694|ref|YP_250399.1| hypothetical protein jk0622 [Corynebacterium jeikeium K411]
 gi|260579580|ref|ZP_05847450.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 
43734]
 gi|68262681|emb|CAI36169.1| hypothetical protein jk0020 [Corynebacterium jeikeium K411]
 gi|68263293|emb|CAI36781.1| hypothetical protein jk0622 [Corynebacterium jeikeium K411]
 gi|258602295|gb|EEW15602.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 
43734]
Length=80

 Score = 38.5 bits (88),  Expect = 0.38, Method: Compositional matrix adjust.
 Identities = 22/64 (35%), Positives = 33/64 (52%), Gaps = 2/64 (3%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT++LP +L+   KV+A      +   V E +R+ L +    +   TP  V LP   C
Sbjct  1   MRTTINLPPKLLEETKVQAKANNVTLSSYVEEAVRAALKKEARISTEDTP--VNLPSFDC  58

Query  61  GGAA  64
           GG A
Sbjct  59  GGPA  62


>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85

 Score = 38.5 bits (88),  Expect = 0.38, Method: Compositional matrix adjust.
 Identities = 17/39 (44%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           M+TT+ + DEL R +K RAA+ GR +  V+ + +R GL+
Sbjct  1   MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLN  39


>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86

 Score = 38.5 bits (88),  Expect = 0.39, Method: Compositional matrix adjust.
 Identities = 20/48 (42%), Positives = 31/48 (65%), Gaps = 0/48 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIP  48
           M+TTL L D+++ A KV A Q+ + +  V++EL R GL+Q +   P P
Sbjct  8   MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGLAQANRQNPEP  55


>gi|86738905|ref|YP_479305.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
 gi|86565767|gb|ABD09576.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
Length=184

 Score = 38.1 bits (87),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 25/72 (35%), Positives = 34/72 (48%), Gaps = 10/72 (13%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQ---THSGAPI-------PTP  50
           M+TT+DLPD+L R     A    R + +   +L+R GL Q   TH+  P          P
Sbjct  1   MRTTIDLPDDLHRQAMSIARDTSRTLSETAADLMRRGLGQGRPTHAYLPFDLTVPPDTPP  60

Query  51  RRVQLPLVHCGG  62
           R V   +  CGG
Sbjct  61  REVLQVITACGG  72


>gi|160898240|ref|YP_001563822.1| antitoxin [Delftia acidovorans SPH-1]
 gi|160363824|gb|ABX35437.1| conserved hypothetical protein, antitoxin [Delftia acidovorans 
SPH-1]
Length=81

 Score = 37.7 bits (86),  Expect = 0.51, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 34/62 (55%), Gaps = 5/62 (8%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           MKTTLDL D L+   K  AAQQ   +  ++ E L+  L +  + A     RRV+LP+ H 
Sbjct  1   MKTTLDLNDALLTEAKTYAAQQHTSLTRLIEEGLQLRLRKAQAPA-----RRVRLPVYHG  55

Query  61  GG  62
            G
Sbjct  56  KG  57


>gi|255324694|ref|ZP_05365808.1| conserved hypothetical protein [Corynebacterium tuberculostearicum 
SK141]
 gi|311739250|ref|ZP_07713087.1| conserved hypothetical protein [Corynebacterium pseudogenitalium 
ATCC 33035]
 gi|255298169|gb|EET77472.1| conserved hypothetical protein [Corynebacterium tuberculostearicum 
SK141]
 gi|311305676|gb|EFQ81742.1| conserved hypothetical protein [Corynebacterium pseudogenitalium 
ATCC 33035]
Length=80

 Score = 37.7 bits (86),  Expect = 0.52, Method: Compositional matrix adjust.
 Identities = 21/64 (33%), Positives = 33/64 (52%), Gaps = 2/64 (3%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT++LP +L+   K++A      +   V E +R+ L +    +   TP  V LP   C
Sbjct  1   MRTTINLPPKLLEETKIQAKANNVTLSSYVEEAVRAALKKEARISTEDTP--VNLPSFDC  58

Query  61  GGAA  64
           GG A
Sbjct  59  GGPA  62


>gi|15840019|ref|NP_335056.1| hypothetical protein MT0645.2 [Mycobacterium tuberculosis CDC1551]
 gi|121636536|ref|YP_976759.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|167969042|ref|ZP_02551319.1| hypothetical protein MtubH3_13852 [Mycobacterium tuberculosis 
H37Ra]
 56 more sequence titles
 Length=75

 Score = 37.4 bits (85),  Expect = 0.75, Method: Compositional matrix adjust.
 Identities = 24/67 (36%), Positives = 33/67 (50%), Gaps = 1/67 (1%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+DLP +L +     A    R + + V +L+R GL+     A    P R  LPLV  
Sbjct  1   MRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDP-RTGLPLVSV  59

Query  61  GGAATRE  67
           G   T E
Sbjct  60  GTVVTSE  66


>gi|289749257|ref|ZP_06508635.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689844|gb|EFD57273.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=85

 Score = 37.4 bits (85),  Expect = 0.78, Method: Compositional matrix adjust.
 Identities = 26/88 (30%), Positives = 46/88 (53%), Gaps = 5/88 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR   +  H G   PT     +P+   
Sbjct  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  55

Query  61  GGAATREQEMTPERVAAALLDQEAQWWS  88
           G    R  ++T  RV + +LD+  +  S
Sbjct  56  GTGPRRGIDLTSNRVLSEVLDEGLELNS  83


>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85

 Score = 37.0 bits (84),  Expect = 0.93, Method: Compositional matrix adjust.
 Identities = 24/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+ + DEL+   K RA ++G+ +  V+ + LR  L+   +G   PT     +P+   
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRRELAAARTGGARPT-----VPVFDA  55

Query  61  GGAATREQEMTPERVAAALLDQEAQWWS  88
           G       ++T   V + +LD+  +  S
Sbjct  56  GTGPRPGIDLTSNTVLSEVLDEGLELNS  83


>gi|163783444|ref|ZP_02178436.1| hypothetical protein HG1285_13457 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881366|gb|EDP74878.1| hypothetical protein HG1285_13457 [Hydrogenivirga sp. 128-5-R1-1]
Length=75

 Score = 37.0 bits (84),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 17/37 (46%), Positives = 27/37 (73%), Gaps = 0/37 (0%)

Query  2   KTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL  38
           K  L+LP EL   +K+RA ++GR +KDV+ ++LR G+
Sbjct  39  KFLLELPYELWMELKMRAVREGRPLKDVMLDILREGV  75


>gi|322433889|ref|YP_004216101.1| hypothetical protein AciX9_0247 [Acidobacterium sp. MP5ACTX9]
 gi|321161616|gb|ADW67321.1| hypothetical protein AciX9_0247 [Acidobacterium sp. MP5ACTX9]
Length=77

 Score = 36.6 bits (83),  Expect = 1.2, Method: Compositional matrix adjust.
 Identities = 13/30 (44%), Positives = 23/30 (77%), Gaps = 0/30 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVV  30
           M+TT+D+PD + R +K RAA++G  +K ++
Sbjct  1   MRTTIDIPDPIYRELKARAAREGTSVKQII  30


>gi|318041772|ref|ZP_07973728.1| hypothetical protein SCB01_08684 [Synechococcus sp. CB0101]
Length=69

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 17/44 (39%), Positives = 27/44 (62%), Gaps = 0/44 (0%)

Query  2   KTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGA  45
           +  LDLP E+M  ++ R+AQ GR + +++ EL+  GL Q    A
Sbjct  17  QVELDLPAEVMDWLQKRSAQSGRSVSELILELIDQGLQQRRDAA  60


>gi|240171735|ref|ZP_04750394.1| hypothetical protein MkanA1_20645 [Mycobacterium kansasii ATCC 
12478]
Length=86

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/39 (42%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           ++TT+ + DEL R +K RAA+ GR +  V+ + +R GL+
Sbjct  2   VRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLN  40


>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
 gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
 gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 73 more sequence titles
 Length=85

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/39 (42%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           M+TT+ + DEL R +K +AA+ GR +  V+ + +R GL+
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLN  39


>gi|238897495|ref|YP_002923174.1| addiction module [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon 
pisum)]
 gi|229465252|gb|ACQ67026.1| addiction module [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon 
pisum)]
Length=84

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 18/34 (53%), Positives = 24/34 (71%), Gaps = 0/34 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELL  34
           M T  +LPDE+ RA++VRAAQ GR  +  V E+L
Sbjct  3   MLTVRNLPDEVHRALRVRAAQHGRSTEAEVREIL  36


>gi|258593475|emb|CBE69814.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=75

 Score = 36.6 bits (83),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 24/54 (45%), Positives = 33/54 (62%), Gaps = 3/54 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL--SQTHSGA-PIPTPR  51
           MKTTL++ D +M  +K  AA+QGR M ++V   LR  L   +  SG  P+PT R
Sbjct  1   MKTTLNIDDSVMVLLKREAARQGRTMSELVESALRLMLRAQRRRSGLPPLPTFR  54


>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85

 Score = 36.6 bits (83),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 16/39 (42%), Positives = 27/39 (70%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           M+TT+ + DEL R +K +AA+ GR +  V+ + +R GL+
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLN  39


>gi|294054234|ref|YP_003547892.1| hypothetical protein Caka_0698 [Coraliomargarita akajimensis 
DSM 45221]
 gi|293613567|gb|ADE53722.1| conserved hypothetical protein [Coraliomargarita akajimensis 
DSM 45221]
Length=84

 Score = 36.6 bits (83),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 21/61 (35%), Positives = 34/61 (56%), Gaps = 5/61 (8%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+D+ D ++ A+K RA  + R M  VV ++L  GL+     AP    ++V+L     
Sbjct  1   MRTTIDIKDAILDALKERAHLEKRPMTKVVNDVLEKGLA-----APTKQTKKVRLKTYGL  55

Query  61  G  61
           G
Sbjct  56  G  56


>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
 gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81

 Score = 36.2 bits (82),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS-----------QTHSGAPIPT  49
           M+TTL L D+++ A +V A Q+ R + DV+++L R  LS           +  SG P   
Sbjct  1   MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLSRPADGGSQNVLEQRSGLP---  57

Query  50  PRRVQLPLVHCGGAATRE  67
               QLP+   GGA   E
Sbjct  58  ----QLPVKASGGAVDLE  71


>gi|288932167|ref|YP_003436227.1| hypothetical protein Ferp_1809 [Ferroglobus placidus DSM 10642]
 gi|288894415|gb|ADC65952.1| conserved hypothetical protein [Ferroglobus placidus DSM 10642]
Length=75

 Score = 35.8 bits (81),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 17/41 (42%), Positives = 28/41 (69%), Gaps = 0/41 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQT  41
           +KT+  LP +L   +K RAA++GR +K++V E + S LS +
Sbjct  4   VKTSFILPRDLYSELKKRAAEEGRTVKEIVIEAILSYLSSS  44


>gi|75911078|ref|YP_325374.1| helix-turn-helix protein CopG [Anabaena variabilis ATCC 29413]
 gi|75704803|gb|ABA24479.1| Helix-turn-helix protein, CopG [Anabaena variabilis ATCC 29413]
Length=95

 Score = 35.8 bits (81),  Expect = 2.1, Method: Compositional matrix adjust.
 Identities = 17/37 (46%), Positives = 25/37 (68%), Gaps = 0/37 (0%)

Query  2   KTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL  38
           +TT+ LP ++ R +K  AA Q R+M D+VTEL+   L
Sbjct  46  RTTIYLPKQVHRQLKAAAASQERQMSDIVTELIEQWL  82


>gi|45657965|ref|YP_002051.1| hypothetical protein LIC12117 [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
 gi|45601206|gb|AAS70688.1| conserved hypothetical protein [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
Length=99

 Score = 35.8 bits (81),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 16/38 (43%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL  38
           +KTTL++PD L +  K++AA++G  M+ +V E L   L
Sbjct  16  VKTTLEIPDLLYKKAKIKAAERGISMRALVIEALEYNL  53


>gi|300311537|ref|YP_003775629.1| plasmid stabilization protein [Herbaspirillum seropedicae SmR1]
 gi|300074322|gb|ADJ63721.1| plasmid stabilization protein [Herbaspirillum seropedicae SmR1]
Length=84

 Score = 35.8 bits (81),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (72%), Gaps = 0/32 (0%)

Query  3   TTLDLPDELMRAIKVRAAQQGRKMKDVVTELL  34
           T  +LPDE+ RA++VRAAQ GR  +  + E+L
Sbjct  5   TVRNLPDEVHRALRVRAAQHGRSTEAEIREIL  36


>gi|15607888|ref|NP_215262.1| hypothetical protein Rv0748 [Mycobacterium tuberculosis H37Rv]
 gi|31791934|ref|NP_854427.1| hypothetical protein Mb0769 [Mycobacterium bovis AF2122/97]
 gi|121636670|ref|YP_976893.1| hypothetical protein BCG_0798 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 59 more sequence titles
 Length=85

 Score = 35.4 bits (80),  Expect = 3.0, Method: Compositional matrix adjust.
 Identities = 25/88 (29%), Positives = 45/88 (52%), Gaps = 5/88 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR   +  H G   PT     +P+   
Sbjct  1   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  55

Query  61  GGAATREQEMTPERVAAALLDQEAQWWS  88
           G    R  ++T  R  + +LD+  +  S
Sbjct  56  GTGPRRGIDLTSNRALSEVLDEGLELNS  83


>gi|304311488|ref|YP_003811086.1| Putative plasmid stabilization protein [gamma proteobacterium 
HdN1]
 gi|301797221|emb|CBL45441.1| Putative plasmid stabilization protein [gamma proteobacterium 
HdN1]
Length=84

 Score = 35.4 bits (80),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 17/39 (44%), Positives = 26/39 (67%), Gaps = 0/39 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           M T  +LPD++ RA++VRAAQ GR  +  V E+L + + 
Sbjct  3   MLTVRNLPDDVHRALRVRAAQHGRSTEAEVREILATAVK  41


>gi|294827927|ref|NP_711849.2| hypothetical protein LA_1668 [Leptospira interrogans serovar 
Lai str. 56601]
 gi|293385772|gb|AAN48867.2| hypothetical protein LA_1668 [Leptospira interrogans serovar 
Lai str. 56601]
Length=84

 Score = 35.4 bits (80),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 16/38 (43%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGL  38
           MKTTL++PD L +  K++AA++G  ++ +V E L   L
Sbjct  1   MKTTLEIPDLLYKKAKIKAAERGISIRALVIEALEHNL  38


>gi|257056357|ref|YP_003134189.1| hypothetical protein Svir_23560 [Saccharomonospora viridis DSM 
43017]
 gi|256586229|gb|ACU97362.1| hypothetical protein Svir_23560 [Saccharomonospora viridis DSM 
43017]
Length=81

 Score = 35.0 bits (79),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 19/47 (41%), Positives = 28/47 (60%), Gaps = 0/47 (0%)

Query  3   TTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPT  49
           T  D  DEL  A++VRAA+ GR M+  V  +LR+ L++  S   + T
Sbjct  5   TIRDFDDELKAALRVRAAEHGRSMEAEVRHILRTVLTKPSSTTGLAT  51


>gi|190606549|ref|YP_001974834.1| hypothetical protein -pVEF3_p65 [Enterococcus faecium]
 gi|190350319|emb|CAP62671.1| hypothetical protein [Enterococcus faecium]
Length=121

 Score = 35.0 bits (79),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 14/31 (46%), Positives = 24/31 (78%), Gaps = 0/31 (0%)

Query  4   TLDLPDELMRAIKVRAAQQGRKMKDVVTELL  34
           ++ LP+E+ R +K++AAQ  R MKDV+ +L+
Sbjct  65  SIYLPEEIHRMVKMKAAQDDRNMKDVMKDLI  95


>gi|15840161|ref|NP_335198.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
 gi|13880314|gb|AAK45012.1| hypothetical protein MT0772.6 [Mycobacterium tuberculosis CDC1551]
Length=88

 Score = 35.0 bits (79),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 25/88 (29%), Positives = 45/88 (52%), Gaps = 5/88 (5%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+ + DE++ A K RA ++G+ +  V+ + LR   +  H G   PT     +P+   
Sbjct  4   MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPT-----VPVFDG  58

Query  61  GGAATREQEMTPERVAAALLDQEAQWWS  88
           G    R  ++T  R  + +LD+  +  S
Sbjct  59  GTGPRRGIDLTSNRALSEVLDEGLELNS  86


>gi|257868361|ref|ZP_05648014.1| predicted protein [Enterococcus casseliflavus EC30]
 gi|257874694|ref|ZP_05654347.1| predicted protein [Enterococcus casseliflavus EC10]
 gi|257802475|gb|EEV31347.1| predicted protein [Enterococcus casseliflavus EC30]
 gi|257808858|gb|EEV37680.1| predicted protein [Enterococcus casseliflavus EC10]
Length=118

 Score = 35.0 bits (79),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 14/28 (50%), Positives = 22/28 (79%), Gaps = 0/28 (0%)

Query  7   LPDELMRAIKVRAAQQGRKMKDVVTELL  34
           LP+E+ R +K++AAQ  R MKDV+ +L+
Sbjct  65  LPEEIHRMVKMKAAQDDRNMKDVMKDLI  92


>gi|296444717|ref|ZP_06886680.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
 gi|296257665|gb|EFH04729.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length=80

 Score = 35.0 bits (79),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 16/37 (44%), Positives = 25/37 (68%), Gaps = 0/37 (0%)

Query  3   TTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLS  39
           T  +L D+LMR ++VRAA+ G  M++   E+LR  +S
Sbjct  5   TIRNLDDDLMRRLRVRAAEHGHSMEEEAREILRRAVS  41


>gi|240169387|ref|ZP_04748046.1| hypothetical protein MkanA1_08743 [Mycobacterium kansasii ATCC 
12478]
Length=75

 Score = 35.0 bits (79),  Expect = 3.8, Method: Compositional matrix adjust.
 Identities = 26/68 (39%), Positives = 36/68 (53%), Gaps = 1/68 (1%)

Query  1   MKTTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHC  60
           M+TT+DLPD+L +     A    R + + V +L+R GL    + A I T  R  LPLV+ 
Sbjct  1   MRTTIDLPDDLHKQALAIARDTRRTLSETVADLMRRGLGAGGAAA-ISTDPRTGLPLVNV  59

Query  61  GGAATREQ  68
           G   T E 
Sbjct  60  GKVVTSED  67


>gi|254250235|ref|ZP_04943555.1| Plasmid stability protein-like [Burkholderia cenocepacia PC184]
 gi|124876736|gb|EAY66726.1| Plasmid stability protein-like [Burkholderia cenocepacia PC184]
Length=91

 Score = 35.0 bits (79),  Expect = 3.9, Method: Compositional matrix adjust.
 Identities = 16/39 (42%), Positives = 28/39 (72%), Gaps = 4/39 (10%)

Query  3   TTLDLPDELMRAIKVRAAQQGR----KMKDVVTELLRSG  37
           T  +LPDE+ RA+++RAAQ GR    +++D++ + +R G
Sbjct  17  TVRNLPDEVHRALRIRAAQHGRSTEAEVRDILEQAVRPG  55


>gi|163868767|ref|YP_001609991.1| hypothetical protein Btr_1680 [Bartonella tribocorum CIP 105476]
 gi|161018438|emb|CAK01996.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length=75

 Score = 35.0 bits (79),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 17/31 (55%), Positives = 21/31 (68%), Gaps = 0/31 (0%)

Query  4   TLDLPDELMRAIKVRAAQQGRKMKDVVTELL  34
           T+D+P+ L R IKV  A +G KM D V ELL
Sbjct  39  TIDVPENLHRLIKVSCASRGTKMADEVRELL  69


>gi|16265087|ref|NP_437879.1| plasmid stability protein [Sinorhizobium meliloti 1021]
 gi|15141226|emb|CAC49739.1| putative plasmid stability protein [Sinorhizobium meliloti 1021]
Length=170

 Score = 35.0 bits (79),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 26/77 (34%), Positives = 39/77 (51%), Gaps = 4/77 (5%)

Query  3   TTLDLPDELMRAIKVRAAQQGRKMKDVVTELLRSGLSQTHSGAPIPTPRRVQLPLVHCGG  62
           T  +L D L + +++RAA  GR M+D   ++LR+ LS T    P      ++  +V  GG
Sbjct  5   TIRNLDDGLKKRLRIRAAAHGRSMEDEARDILRAALS-TGENRPANLAAAIRSRIVPLGG  63

Query  63  AATREQEMTPERVAAAL  79
               E E+ P R  AA 
Sbjct  64  V---ELELPPARPCAAY  77



Lambda     K      H
   0.317    0.129    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131599744116


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40