BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2608
Length=580
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium t... 1137 0.0
gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium t... 1137 0.0
gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium b... 1135 0.0
gi|340627626|ref|YP_004746078.1| PPE family protein [Mycobacteri... 1134 0.0
gi|289751233|ref|ZP_06510611.1| PPE family protein [Mycobacteriu... 1073 0.0
gi|308378398|ref|ZP_07482454.2| PPE family protein [Mycobacteriu... 1040 0.0
gi|289762782|ref|ZP_06522160.1| PPE family protein [Mycobacteriu... 1018 0.0
gi|167966667|ref|ZP_02548944.1| PPE family protein [Mycobacteriu... 688 0.0
gi|240173259|ref|ZP_04751917.1| PPE family protein [Mycobacteriu... 527 3e-147
gi|167966680|ref|ZP_02548957.1| PPE family protein [Mycobacteriu... 424 2e-116
gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacteriu... 328 2e-87
gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [My... 292 1e-76
gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacteriu... 283 4e-74
gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tu... 283 6e-74
gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium... 283 6e-74
gi|183982248|ref|YP_001850539.1| PE-PGRS family protein, PE16 [M... 270 4e-70
gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacteriu... 245 1e-62
gi|240172139|ref|ZP_04750798.1| PPE family protein [Mycobacteriu... 237 6e-60
gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacteri... 235 2e-59
gi|240172001|ref|ZP_04750660.1| PPE family protein [Mycobacteriu... 234 3e-59
gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacteriu... 233 9e-59
gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacteri... 231 3e-58
gi|183984588|ref|YP_001852879.1| PPE family protein [Mycobacteri... 230 5e-58
gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium t... 228 2e-57
gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacteriu... 228 2e-57
gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacteriu... 228 2e-57
gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacteriu... 228 2e-57
gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacteriu... 228 2e-57
gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tu... 228 2e-57
gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium ... 228 2e-57
gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacteri... 228 3e-57
gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacteriu... 226 1e-56
gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium t... 226 1e-56
gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacteriu... 226 1e-56
gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacteri... 224 3e-56
gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacteri... 222 1e-55
gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 221 4e-55
gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium b... 217 5e-54
gi|289441734|ref|ZP_06431478.1| PPE family protein [Mycobacteriu... 216 1e-53
gi|289748838|ref|ZP_06508216.1| PPE family protein [Mycobacteriu... 215 2e-53
gi|289752384|ref|ZP_06511762.1| PPE family protein [Mycobacteriu... 215 2e-53
gi|308379758|ref|ZP_07669042.1| putative PPE family protein [Myc... 214 3e-53
gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacteri... 214 4e-53
gi|289756421|ref|ZP_06515799.1| PPE family protein [Mycobacteriu... 214 4e-53
gi|289572940|ref|ZP_06453167.1| PE family protein [Mycobacterium... 214 4e-53
gi|289760466|ref|ZP_06519844.1| PPE-repeat protein [Mycobacteriu... 214 5e-53
gi|294995112|ref|ZP_06800803.1| PPE family protein [Mycobacteriu... 214 5e-53
gi|31791532|ref|NP_854025.1| PPE family protein [Mycobacterium b... 214 5e-53
gi|121636268|ref|YP_976491.1| PPE family protein [Mycobacterium ... 214 5e-53
gi|289445893|ref|ZP_06435637.1| PPE family protein [Mycobacteriu... 214 5e-53
>gi|57117005|ref|YP_177893.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662448|ref|YP_001283971.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823802|ref|YP_001288556.1| PPE family protein [Mycobacterium tuberculosis F11]
39 more sequence titles
Length=580
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/580 (100%), Positives = 580/580 (100%), Gaps = 0/580 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP
Sbjct 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL
Sbjct 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL
Sbjct 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI
Sbjct 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
Query 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP
Sbjct 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
Query 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
Query 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV
Sbjct 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
Query 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP
Sbjct 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
Query 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
>gi|15842148|ref|NP_337185.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882433|gb|AAK46999.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323718805|gb|EGB27962.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=580
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/580 (99%), Positives = 579/580 (99%), Gaps = 0/580 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGL GDAWHGP
Sbjct 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLTGDAWHGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL
Sbjct 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL
Sbjct 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI
Sbjct 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
Query 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP
Sbjct 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
Query 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
Query 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV
Sbjct 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
Query 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP
Sbjct 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
Query 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
>gi|31793793|ref|NP_856286.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121638495|ref|YP_978719.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990989|ref|YP_002645676.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
8 more sequence titles
Length=580
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/580 (99%), Positives = 579/580 (99%), Gaps = 0/580 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP
Sbjct 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL
Sbjct 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL
Sbjct 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI
Sbjct 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
Query 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLL LPNIPLLEYAARFITPVHP
Sbjct 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLSLPNIPLLEYAARFITPVHP 300
Query 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
Query 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV
Sbjct 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
Query 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP
Sbjct 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
Query 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
>gi|340627626|ref|YP_004746078.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005816|emb|CCC44982.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=580
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/580 (99%), Positives = 578/580 (99%), Gaps = 0/580 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP
Sbjct 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
ASLAMTRAASPYVGWLNTAAGQAAQAAG ARLAASAFEA LAATVSPAMVAANRTRLASL
Sbjct 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGHARLAASAFEAALAATVSPAMVAANRTRLASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL
Sbjct 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI
Sbjct 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
Query 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP
Sbjct 241 GITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP 300
Query 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI
Sbjct 301 GYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATI 360
Query 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA
Sbjct 361 ATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADA 420
Query 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV
Sbjct 421 YPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDV 480
Query 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP
Sbjct 481 LTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP 540
Query 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
>gi|289751233|ref|ZP_06510611.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691820|gb|EFD59249.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=547
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/547 (99%), Positives = 547/547 (100%), Gaps = 0/547 (0%)
Query 34 LAEELHAAAGSFASVTTGLAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLA 93
+AEELHAAAGSFASVTTGLAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLA
Sbjct 1 MAEELHAAAGSFASVTTGLAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLA 60
Query 94 ASAFEATLAATVSPAMVAANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFG 153
ASAFEATLAATVSPAMVAANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFG
Sbjct 61 ASAFEATLAATVSPAMVAANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFG 120
Query 154 YHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNR 213
YHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNR
Sbjct 121 YHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNR 180
Query 214 GDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVM 273
GDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVM
Sbjct 181 GDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVM 240
Query 274 GGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVT 333
GGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVT
Sbjct 241 GGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVT 300
Query 334 NLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRP 393
NLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRP
Sbjct 301 NLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRP 360
Query 394 DGGILTRFGFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGI 453
DGGILTRFGFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGI
Sbjct 361 DGGILTRFGFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGI 420
Query 454 LFLHSGLIALPPDLASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQ 513
LFLHSGLIALPPDLASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQ
Sbjct 421 LFLHSGLIALPPDLASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQ 480
Query 514 PDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQ 573
PDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQ
Sbjct 481 PDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQ 540
Query 574 PALPRLF 580
PALPRLF
Sbjct 541 PALPRLF 547
>gi|308378398|ref|ZP_07482454.2| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308352711|gb|EFP41562.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=529
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/529 (99%), Positives = 529/529 (100%), Gaps = 0/529 (0%)
Query 52 LAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVA 111
+AGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVA
Sbjct 1 MAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVA 60
Query 112 ANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEG 171
ANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEG
Sbjct 61 ANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEG 120
Query 172 LQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG 231
LQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG
Sbjct 121 LQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG 180
Query 232 NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYA 291
NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYA
Sbjct 181 NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYA 240
Query 292 ARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVV 351
ARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVV
Sbjct 241 ARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVV 300
Query 352 FGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFT 411
FGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFT
Sbjct 301 FGTSQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFT 360
Query 412 LSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGV 471
LSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGV
Sbjct 361 LSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGV 420
Query 472 VQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQD 531
VQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQD
Sbjct 421 VQPVSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQD 480
Query 532 VPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
VPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 481 VPSPFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 529
>gi|289762782|ref|ZP_06522160.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289710288|gb|EFD74304.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=518
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/518 (99%), Positives = 518/518 (100%), Gaps = 0/518 (0%)
Query 63 LAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLVA 122
+AMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLVA
Sbjct 1 MAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLVA 60
Query 123 ANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLAQ 182
ANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLAQ
Sbjct 61 ANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLAQ 120
Query 183 LASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGI 242
LASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGI
Sbjct 121 LASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGI 180
Query 243 TGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGY 302
TGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGY
Sbjct 181 TGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGY 240
Query 303 TATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIAT 362
TATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIAT
Sbjct 241 TATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIAT 300
Query 363 FEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADAYP 422
FEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADAYP
Sbjct 301 FEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSGATPADAYP 360
Query 423 TVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDVLT 482
TVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDVLT
Sbjct 361 TVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQPVSSPDVLT 420
Query 483 TYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDV 542
TYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDV
Sbjct 421 TYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDV 480
Query 543 DWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
DWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 481 DWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 518
>gi|167966667|ref|ZP_02548944.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=346
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/346 (100%), Positives = 346/346 (100%), Gaps = 0/346 (0%)
Query 235 NWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARF 294
NWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARF
Sbjct 1 NWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARF 60
Query 295 ITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGT 354
ITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGT
Sbjct 61 ITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGT 120
Query 355 SQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSG 414
SQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSG
Sbjct 121 SQSATIATFEMRYLQSLPAHLRPGLDELSFTLTGNPNRPDGGILTRFGFSIPQLGFTLSG 180
Query 415 ATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQP 474
ATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQP
Sbjct 181 ATPADAYPTVDYAFQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPDLASGVVQP 240
Query 475 VSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPS 534
VSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPS
Sbjct 241 VSSPDVLTTYILLPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPS 300
Query 535 PFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 580
PFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF
Sbjct 301 PFGLFPDVDWAEVAADLQQGAVQGVNDALSGLGLPPPWQPALPRLF 346
>gi|240173259|ref|ZP_04751917.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=637
Score = 527 bits (1357), Expect = 3e-147, Method: Compositional matrix adjust.
Identities = 319/639 (50%), Positives = 399/639 (63%), Gaps = 64/639 (10%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF +LPPE+NS R+F+GAGLGPMLAA++AWDG+A EL +AA SF ++T GLAG W G
Sbjct 1 MNFVILPPEINSTRMFSGAGLGPMLAASAAWDGVAAELGSAATSFEALTAGLAGGTWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AM AA+PY WL A A QAA QAR A SAFEA ATV PA++A NR++L SL
Sbjct 61 ASAAMLGAAAPYAAWLQATASDAEQAAAQARSAVSAFEAAQPATVHPAIIAGNRSQLLSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
V +NL GQNAPAIA AEAEYEQ+WAQDV AM GYH +ASA QL P QE L Q+L ++
Sbjct 121 VMSNLFGQNAPAIALAEAEYEQMWAQDVTAMLGYHLSASAAVAQLPPWQE-LPQRLADMA 179
Query 181 A------QLASGNLGSGNVGVGNIGNDNIG------------------------------ 204
QL + N+G+GN G NIGN+N G
Sbjct 180 DSAIASWQLPNINIGTGNTGSFNIGNNNTGNFNIGSNNIGNANIGNANLGSFNLGFDNVG 239
Query 205 ----------NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
NAN+G N G NIG N GD N+GI N G N+G G G +GF +P
Sbjct 240 NFNAGWNNYVNANVGTRNVGQFNIGFENTGDANVGIWNVGFRNVGFVNVGEGLVGFARPG 299
Query 255 NPDVLV--VGNGGPGVTALVMGGTDSLLPLPNIPLLEYAAR-FITPVHP---GYTATFLE 308
+ DV V V G ++ G + PLP I + FI PV P GY A FL
Sbjct 300 DGDVGVTSVFERLGGGGVVLTLGGTAFSPLPRIFYTAAVSDLFINPVDPAFAGYAANFLV 359
Query 309 TPSQFFPFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYL 368
TPS+ +P TGL+SL+ D SVA+GV +L++AIM Q G + VV G SQ A + EMR+L
Sbjct 360 TPSKLWPLTGLDSLSLDKSVARGVADLNSAIMTQFTLGQKTVVLGYSQGAVVVGEEMRHL 419
Query 369 QSLPAHLRPGLDELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYA 427
+LP RP L +LSF L G+P P+GGIL+RF G +P FT ATP++ YPT Y+
Sbjct 420 ATLPTDQRPALSDLSFVLIGDPANPNGGILSRFPGVHLPIADFTFFPATPSNVYPTTVYS 479
Query 428 FQYDGVNDFPKYPLNVFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYIL 486
+Y G+++FP+YP+N+ A NA+AG L LHS AL P+ +A+GVVQPV +P LTTYI+
Sbjct 480 LEYGGISNFPQYPINILADVNAVAGALILHSQFPALTPEWVAAGVVQPV-TPGSLTTYIM 538
Query 487 LPSQDLPLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAH------QDVPSPFGLFP 540
+P QDLP+L P+RAIP +G PLADLIQP+L+VLV GY H DVP+P GLFP
Sbjct 539 IPVQDLPMLAPVRAIPFVGEPLADLIQPNLKVLVNWGYGNLEHGYSQGPADVPTPAGLFP 598
Query 541 DVDWAEVAADLQQGAVQGVNDALSGLGLPP--PWQPALP 577
D+ +V A LQ+G VQGVNDAL+ +GLPP W P LP
Sbjct 599 DISVFDVVAALQRGTVQGVNDALADVGLPPLSSWLPRLP 637
>gi|167966680|ref|ZP_02548957.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=256
Score = 424 bits (1090), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 249/256 (98%), Positives = 255/256 (99%), Gaps = 0/256 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP
Sbjct 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL
Sbjct 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL
Sbjct 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWN+G+
Sbjct 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNVGM 240
Query 241 GITGNGQIGFGKPANP 256
G+TG+GQIG G+PA+P
Sbjct 241 GLTGHGQIGLGEPAHP 256
>gi|240173260|ref|ZP_04751918.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=494
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/314 (58%), Positives = 218/314 (70%), Gaps = 14/314 (4%)
Query 269 TALVMGGTDSLLPLPNIPLLEYAAR----FITPVHPGYTATFLETPSQFFPFTGLNSLTY 324
TALVMG T L P P+ Y +R FI P HPGY A L TP Q++P TGL SLT
Sbjct 188 TALVMG-TAFLQPTPS-----YVSRIDQLFIAPFHPGYLAQGLYTPEQYWPLTGLTSLTV 241
Query 325 DVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELSF 384
S+ Q L+ AIM Q GN +VFG SQSA++A+ EM++L +LPA RP D+LSF
Sbjct 242 GQSMVQSAKVLNDAIMTQ--NGNPTLVFGYSQSASVASLEMQHLLTLPAGQRPTADQLSF 299
Query 385 TLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNV 443
L NPNRP+GG L RF G IP L GATPA+AYPT DYA QYD DFP+YPLN+
Sbjct 300 VLAANPNRPNGGFLERFHGLYIPILDLPFFGATPANAYPTTDYAIQYDFQADFPQYPLNL 359
Query 444 FATANAIAGILFLHSGLIALPP-DLASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAIP 502
A ANA+AG ++HS L P +A+GVVQPVS D +T YIL+P+ DLPLL PLRA+P
Sbjct 360 LADANAVAGQFYIHSSYPDLTPAQIATGVVQPVSPADTMTKYILIPTHDLPLLNPLRAVP 419
Query 503 LLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQGAVQGVNDA 562
+LGNPLADL+QPDLRVLVELGYDRTA+QDVP+P GLFP D VA L +GA QG++DA
Sbjct 420 ILGNPLADLVQPDLRVLVELGYDRTAYQDVPTPAGLFPQFDPLTVAGQLVEGAGQGLHDA 479
Query 563 LSGLGLPPPWQPAL 576
++ LGLPPP P L
Sbjct 480 MADLGLPPPRFPQL 493
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/170 (68%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF VLPPE+NSAR++AGAG PMLAAA+AWDGLA +L A+A SF SV + L +W G
Sbjct 1 MNFTVLPPEINSARMYAGAGPAPMLAAAAAWDGLAADLQASAVSFESVASCLV-TSWQGA 59
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+ WL+ AA A Q AGQAR+AAS FEA L ATV PAMV NRT+L SL
Sbjct 60 ASTAMTAAAAPYLAWLSAAAQHAEQTAGQARMAASTFEAALTATVHPAMVGVNRTQLVSL 119
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQE 170
+A+NLLGQNAPAIAA EAEYEQ+WAQ+VAAM GY+S ASAVA++L P Q+
Sbjct 120 IASNLLGQNAPAIAATEAEYEQMWAQNVAAMSGYYSNASAVASRLTPWQQ 169
>gi|240171801|ref|ZP_04750460.1| PE-PGRS family protein, PE16 [Mycobacterium kansasii ATCC 12478]
Length=580
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/328 (54%), Positives = 221/328 (68%), Gaps = 8/328 (2%)
Query 256 PDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAAR-FITPVHPGYTATFLETPSQFF 314
P+ V GG G T L+MG T + P P+ L+ +I P +PG + TP QF
Sbjct 102 PNRTVGAPGGGGPTVLIMGPTGN--PGPSFRYLQQVYNLYIRPFYPGSPVLGVTTPEQFQ 159
Query 315 PFTGLNSLTYDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAH 374
PFTG+ SLT+D SVA G +LH AIMAQ AAG++VVV G SQSA++AT EMRYL SLPA
Sbjct 160 PFTGIPSLTFDESVAAGAADLHAAIMAQHAAGHDVVVLGFSQSASVATAEMRYLASLPAD 219
Query 375 LRPGLDELSFTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGV 433
LRPG D+LSF L G+PN P+GG+L RF G + +G T SGATP++ YPT Y QYDG
Sbjct 220 LRPGPDQLSFVLLGDPNNPNGGLLARFPGLFVQPMGLTFSGATPSNLYPTTVYTRQYDGF 279
Query 434 NDFPKYPLNVFATANAIAGILFLHSGLIALPP-DLASGVVQPVSSPDVLTTYILLPSQDL 492
DFP+YPLN+ A NA+ GI + H L P +A+GVVQPVS DV TTY+LLPS+ L
Sbjct 280 ADFPQYPLNIPADLNALLGIYYAHGTYQELTPAQVAAGVVQPVSPADVYTTYMLLPSEHL 339
Query 493 PLLVPLRAIPLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP-DVDWAEVAADL 551
PLL PLR I + PL DL++PDLRV++ELGYDRT + DVP+P GLFP D+D +A DL
Sbjct 340 PLLEPLRGI--VPAPLLDLVEPDLRVIIELGYDRTGYADVPTPAGLFPTDIDALTLAGDL 397
Query 552 QQGAVQGVNDALSGLGLPPPWQPALPRL 579
G++ AL+ +GLPP + A+P L
Sbjct 398 ADSTAHGIDHALADVGLPPLPKVAIPNL 425
>gi|340626444|ref|YP_004744896.1| PE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004634|emb|CCC43778.1| PE family protein [Mycobacterium canettii CIPT 140010059]
Length=528
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 205/306 (67%), Gaps = 7/306 (2%)
Query 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
G G TAL++G T + P P + + R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 109 GSGGRTALILGSTGTPRP-PFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
Query 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
Query 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
Query 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
Query 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VRIDPIAVPPQIGAAIGGPL 404
Query 561 DALSGL 566
AL GL
Sbjct 405 TALDGL 410
>gi|15840887|ref|NP_335924.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792624|ref|NP_855117.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116862|ref|YP_177810.1| PE family protein [Mycobacterium tuberculosis H37Rv]
71 more sequence titles
Length=528
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 205/306 (67%), Gaps = 7/306 (2%)
Query 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
G G TAL++G T + P P + + R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 109 GSGGRTALILGSTGTPRP-PFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
Query 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
Query 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
Query 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
Query 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
Query 561 DALSGL 566
AL GL
Sbjct 405 TALDGL 410
>gi|289761589|ref|ZP_06520967.1| PE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709095|gb|EFD73111.1| PE family protein [Mycobacterium tuberculosis GM 1503]
Length=528
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/306 (55%), Positives = 205/306 (67%), Gaps = 7/306 (2%)
Query 264 GGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLT 323
G G TAL++G T + P P + + R+I P + GY + L TP+QF P+TG+ SLT
Sbjct 109 GSGGRTALILGSTGTPRP-PFDYMQQVYDRYIAPHYLGYAFSGLYTPAQFQPWTGIPSLT 167
Query 324 YDVSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELS 383
YD SVA+G LHTAIM Q+AAGN+VVV G SQ A++AT EMR+L SLPA + P D+LS
Sbjct 168 YDQSVAEGAGYLHTAIMQQVAAGNDVVVLGFSQGASVATLEMRHLASLPAGVAPSPDQLS 227
Query 384 FTLTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLN 442
F L GNPN P+GGIL RF G + LG T +GATP Y T Y QYDG DFPKYPLN
Sbjct 228 FVLLGNPNNPNGGILARFPGLYLQSLGLTFNGATPDTDYATTIYTTQYDGFADFPKYPLN 287
Query 443 VFATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAI 501
+ A NA+ GI + HS L P+ +ASG+V PVSSPD TTYILLP++DLPLL PLR I
Sbjct 288 ILADVNALLGIYYSHSLYYGLTPEQVASGIVLPVSSPDTNTTYILLPNEDLPLLQPLRGI 347
Query 502 PLLGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFPDVDWAEVAADLQQG-AVQGVN 560
+ PL DLI+PDLR ++ELGYDRT + DVP+P LFP V +A Q G A+ G
Sbjct 348 --VPEPLLDLIEPDLRAIIELGYDRTGYADVPTPAALFP-VHIDPIAVPPQIGAAIGGPL 404
Query 561 DALSGL 566
AL GL
Sbjct 405 TALDGL 410
>gi|183982248|ref|YP_001850539.1| PE-PGRS family protein, PE16 [Mycobacterium marinum M]
gi|183175574|gb|ACC40684.1| PE-PGRS family protein, PE16 [Mycobacterium marinum M]
Length=612
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/305 (52%), Positives = 204/305 (67%), Gaps = 8/305 (2%)
Query 267 GVTALVMGGTDSLLPLPNIPLL-EYAARFITPVHPGYTATFLETPSQFFPFTGLNSLTYD 325
G + LV+G T + P P+ + E F+ P + G + ++TP+QF PFTG+ +LT+D
Sbjct 141 GRSVLVVGSTGT--PRPSYRFMREVYDLFVAPHYFGDSLFGVQTPAQFQPFTGIPNLTFD 198
Query 326 VSVAQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGLDELSFT 385
S A G + LH AI QLA GN VVV G SQ A++AT EMR+LQSLP RP ++LSF
Sbjct 199 ESAATGASYLHAAITQQLADGNRVVVAGFSQGASVATLEMRHLQSLPIDSRPSPEDLSFV 258
Query 386 LTGNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNVF 444
L GNPN P+GGIL RF G I +G T +GATP YPT Y QYDG DFP+YPLNV
Sbjct 259 LLGNPNNPNGGILARFPGLYIQSVGLTFNGATPVTEYPTTVYTTQYDGFADFPQYPLNVV 318
Query 445 ATANAIAGILFLHSGLIALPPD-LASGVVQPVSSPDVLTTYILLPSQDLPLLVPLRAIPL 503
A NA+ GI + HS L PD +A+GVV PVSSPDV TTYIL+P++ LPLL PLR I
Sbjct 319 ADVNALLGISYSHSLYYGLTPDQVAAGVVLPVSSPDVNTTYILIPNEHLPLLQPLRGI-- 376
Query 504 LGNPLADLIQPDLRVLVELGYDRTAHQDVPSPFGLFP-DVDWAEVAADLQQGAVQGVNDA 562
+ + + D I+P LR +VELGYDRT + DVP+P LFP +V+ VA +GAV+G+++
Sbjct 377 VPDSVLDGIEPGLRDVVELGYDRTGYADVPTPASLFPANVNPNVVAGAFVEGAVRGIDNG 436
Query 563 LSGLG 567
L+G+G
Sbjct 437 LAGMG 441
>gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=591
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/258 (63%), Positives = 186/258 (73%), Gaps = 2/258 (0%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF +LPPE+NSAR++ GAG GPMLAAA+AWDGLA EL +AAGSF SVT+GL G W GP
Sbjct 4 MNFVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVWQGP 63
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
A+ AM AA+PYVGWL+ AA A AAGQAR A SAFEA +AATV P VAANR +L SL
Sbjct 64 AATAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQLVSL 123
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVL 180
V +NL GQNAPAIAAAE YEQ+WAQDVAAM GYH A+AV QLAP+Q GLQQ LQ +
Sbjct 124 VVSNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQTLP 183
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
LA NLG GN G GN+G N G+ N+G GN G N+G GN G+ NLG GN+GN N+G
Sbjct 184 GMLA--NLGVGNAGSGNLGGGNHGDNNLGSGNNGSHNVGSGNAGNTNLGNGNSGNSNVGN 241
Query 241 GITGNGQIGFGKPANPDV 258
G G+ G G +
Sbjct 242 GNRGDQNFGSGNSGGTNT 259
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/193 (32%), Positives = 81/193 (42%), Gaps = 38/193 (19%)
Query 187 NLGSGNVGV--------------------GNIGNDNIGNANIGFGNRGDANIGIGNIGDR 226
N G+GN+G N+G+ N G+ N+GFGNRG +NIG+ N G+
Sbjct 258 NTGNGNIGTGNVGSGNLGNGNLGNGNLGNSNVGSGNRGDNNMGFGNRGSSNIGVSNTGNH 317
Query 227 NLGIGNTGNWNIGIGITGNGQIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSLLPLPNI 285
+ G GNTGN +IG G+TG+ Q+GFG + + GN G G GT N+
Sbjct 318 DFGFGNTGNNDIGFGLTGDNQVGFGALNSGSGNIGFGNSGSGNVGFFNSGT------GNV 371
Query 286 PLLEYAARFITPVHPGYTATFLETPSQ---FFPFTGLNSLTYDVSVAQGVTNLHTAIMAQ 342
L + G T L Q F G NSL G+ N M
Sbjct 372 GLFNSGGHSFGAENSGSFNTGLTNSGQGNTGFVNAGFNSL--------GLANAGANNMGV 423
Query 343 LAAGNEVVVFGTS 355
G++ FG S
Sbjct 424 FNGGSQNFGFGNS 436
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/88 (44%), Positives = 52/88 (60%), Gaps = 7/88 (7%)
Query 185 SGNLGSGNVGVGNIGNDNI-----GNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWN 237
SGN G N+G GN G+ NI GN + GFGN G+ +IG G GD +G G N+G+ N
Sbjct 291 SGNRGDNNMGFGNRGSSNIGVSNTGNHDFGFGNTGNNDIGFGLTGDNQVGFGALNSGSGN 350
Query 238 IGIGITGNGQIGFGKPANPDVLVVGNGG 265
IG G +G+G +GF +V + +GG
Sbjct 351 IGFGNSGSGNVGFFNSGTGNVGLFNSGG 378
>gi|240172139|ref|ZP_04750798.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=893
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 161/282 (58%), Positives = 191/282 (68%), Gaps = 30/282 (10%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPE+NSAR++ GAGLGPML AA AWDGLA EL +AA SF+SVT+GLAG W GP
Sbjct 1 MNFAVLPPEINSARMYLGAGLGPMLNAAVAWDGLAAELGSAATSFSSVTSGLAGSFWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AM AA PY+GWLN AA QA QAA +ARL A+AFEA LAATV PA+++ANRT+L SL
Sbjct 61 ASTAMADAAVPYLGWLNAAASQAEQAALRARLTAAAFEAALAATVHPAIISANRTQLVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQL---- 176
V +NLLGQNA AIA AE +YEQ+WA+DVAAM YH+ ASA + L P L + +
Sbjct 121 VFSNLLGQNATAIADAEIQYEQMWARDVAAMLDYHARASAALSTLTPFPPTLARLVNPAT 180
Query 177 --------QNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGD--- 225
Q+++ N+G NVG GN+GN NIG+ N G GN G +NIG GNIG
Sbjct 181 VNAAAAAAQDIVVPFR--NVGLANVGRGNVGNANIGDFNFGSGNTGSSNIGSGNIGTNNI 238
Query 226 -------------RNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
RN+G GNTGN NIGIG TG+ IGFG
Sbjct 239 GFGNSGPMLTAALRNIGFGNTGNGNIGIGNTGDNNIGFGNTG 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/72 (53%), Positives = 48/72 (67%), Gaps = 0/72 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L S N+GS N+G NIG N G NIG N GD+N G N G+ N+G GNTG+ N+G
Sbjct 585 FGNLGSYNIGSANLGSYNIGPANFGEFNIGLWNAGDSNHGFANTGNNNVGFGNTGSNNVG 644
Query 240 IGITGNGQIGFG 251
+G+TG GQ+GFG
Sbjct 645 VGLTGTGQVGFG 656
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/91 (44%), Positives = 48/91 (53%), Gaps = 12/91 (13%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------NIGDRNLGIGNTG 234
N+G GN G GNIG N G+ NIGFGN G N GIG N G N+G N+G
Sbjct 253 NIGFGNTGNGNIGIGNTGDNNIGFGNTGTGNRGIGLNGDNRWGFGGMNSGTGNVGFFNSG 312
Query 235 NWNIGIGITGNGQIGFGKPANPDVLVVGNGG 265
N+GIG +G+G G G N +GN G
Sbjct 313 TGNVGIGNSGSGNWGIGNSGNGYNTGIGNSG 343
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/84 (42%), Positives = 43/84 (52%), Gaps = 13/84 (15%)
Query 180 LAQLASGNLGSGNVGVGN------------IGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
+ N+G GN G GN G N G N+GF N G N+GIGN G N
Sbjct 266 IGNTGDNNIGFGNTGTGNRGIGLNGDNRWGFGGMNSGTGNVGFFNSGTGNVGIGNSGSGN 325
Query 228 LGIGNTGN-WNIGIGITGNGQIGF 250
GIGN+GN +N GIG +G+ GF
Sbjct 326 WGIGNSGNGYNTGIGNSGDVNTGF 349
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 44/76 (58%), Gaps = 3/76 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G N+G N G+ N+G+AN G GN GD N+G GN G N G GN G++NIG G+
Sbjct 542 NFGDANIGSFNFGSGNVGSANFGSGNVGDTNLGSGNFGFFNAGFGNLGSYNIGSANLGSY 601
Query 247 QIGFGKPANPDVLVVG 262
IG PAN +G
Sbjct 602 NIG---PANFGEFNIG 614
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/63 (53%), Positives = 39/63 (62%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G N G+ NIG+ N G GN G AN G GN+GD NLG GN G +N G G G+
Sbjct 532 NVGFANSGRLNFGDANIGSFNFGSGNVGSANFGSGNVGDTNLGSGNFGFFNAGFGNLGSY 591
Query 247 QIG 249
IG
Sbjct 592 NIG 594
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/75 (46%), Positives = 41/75 (55%), Gaps = 2/75 (2%)
Query 168 IQEGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGD 225
+ GL Q L SG N+G N G NIG N G N+G GN G + GIGN G
Sbjct 643 VGVGLTGTGQVGFGALNSGANNIGLFNSGTNNIGLFNSGTGNVGVGNSGTGDWGIGNPGT 702
Query 226 RNLGIGNTGNWNIGI 240
N GIGNTG++N G+
Sbjct 703 GNTGIGNTGSYNTGL 717
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 38/76 (50%), Gaps = 17/76 (22%)
Query 186 GNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNIGDRNL 228
GN GS NVGVG NIG N G NIG N G N+G+GN G +
Sbjct 636 GNTGSNNVGVGLTGTGQVGFGALNSGANNIGLFNSGTNNIGLFNSGTGNVGVGNSGTGDW 695
Query 229 GIGNTGNWNIGIGITG 244
GIGN G N GIG TG
Sbjct 696 GIGNPGTGNTGIGNTG 711
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/62 (49%), Positives = 37/62 (60%), Gaps = 1/62 (1%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDA-NIGIGNIGDRNLGIGNTGNWNIGIGI 242
+GN+G N G GN+G N G+ N G GN G+ N GIGN GD N G N+G N GI
Sbjct 302 GTGNVGFFNSGTGNVGIGNSGSGNWGIGNSGNGYNTGIGNSGDVNTGFFNSGVVNTGIAN 361
Query 243 TG 244
+G
Sbjct 362 SG 363
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 0/60 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G G+ G N G N G GN G N G+ N G N G NTG++N G
Sbjct 677 LFNSGTGNVGVGNSGTGDWGIGNPGTGNTGIGNTGSYNTGLFNAGIINTGFANTGDYNTG 736
>gi|183981048|ref|YP_001849339.1| PPE family protein [Mycobacterium marinum M]
gi|183174374|gb|ACC39484.1| PPE family protein [Mycobacterium marinum M]
Length=661
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/313 (46%), Positives = 197/313 (63%), Gaps = 18/313 (5%)
Query 270 ALVMGGTDSLLPLPNIPLLEYA-ARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSV 328
A VMGG+ +P+P+ ++ A + +I G A L TP +P TG+ +LT+D SV
Sbjct 218 AEVMGGSG--IPMPSRRYVQLANSLYIGRSVGGAVAQALFTPEGLYPVTGVKNLTFDTSV 275
Query 329 AQGVTNLHTAIMAQLAAGNEVVVFGTSQSATIATFEMRYLQSLPAHLRPGL-DELSFTLT 387
A+GV L +AI Q+ AGN V VFG SQSATI++ M L A + P D+LSFTL
Sbjct 276 ARGVVILESAIREQITAGNNVTVFGYSQSATISSLTMT---KLAASINPPTPDQLSFTLV 332
Query 388 GNPNRPDGGILTRF-GFSIPQLGFTLSGATPADAYPTVDYAFQYDGVNDFPKYPLNVFAT 446
G+PN P+GG+ TRF G S+P LG T SGATP + YPT Y +YDGV DFP+YPLN+ +T
Sbjct 333 GDPNNPNGGVATRFPGLSLPSLGITASGATPDNLYPTRIYTLEYDGVADFPRYPLNLVST 392
Query 447 ANAIAGILFLHSGLIALPPDLASGVVQPVSSPD-VLTTYILLPSQDLPLLVPLRAIPLLG 505
NA+AG ++H+ + L P V ++ +T Y ++ ++DLPLL PLRA+P+LG
Sbjct 393 LNALAGAYYVHTDYLFLTPAQIDAAVHLTNTVGPTMTDYYVIRTEDLPLLEPLRALPVLG 452
Query 506 NPLADLIQPDLRVLVELGYDRTAH------QDVPSPFGLFPDVDWAEVAADLQQGAVQGV 559
+PLADL+QP+L+V+V LGY A+ +V +PFGL+P+V +A L G QG+
Sbjct 453 DPLADLVQPNLKVIVNLGYGDPAYGYSTSPPNVATPFGLWPEVSPLTIADALAAGTQQGI 512
Query 560 ND---ALSGLGLP 569
+D +S L LP
Sbjct 513 HDFGYHISHLDLP 525
>gi|240172001|ref|ZP_04750660.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=578
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/291 (53%), Positives = 178/291 (62%), Gaps = 39/291 (13%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+F+VLPPE+NSARIFAGAG P+LAAA+ W GLAEEL +AA SF SVT GL G +W GP
Sbjct 1 MSFSVLPPEINSARIFAGAGADPLLAAATTWGGLAEELESAATSFGSVTAGLVGGSWVGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AM AA+PY GWL+ +A QA QAA QA + FEA AA V P MVAANR L SL
Sbjct 61 ASEAMLAAAAPYAGWLSASATQARQAATQAGALLAEFEAVQAAMVQPIMVAANRGDLVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQE------GLQQ 174
V +NL GQNAPAIA+ EA YE +WAQDVAAM YH+ ASAV + L P + GL
Sbjct 121 VLSNLFGQNAPAIASVEAAYEAMWAQDVAAMSAYHAGASAVISALTPFTKPLQGLAGLPD 180
Query 175 QLQNVLAQLASG---------------------------------NLGSGNVGVGNIGND 201
L + A A+G N G GN+G N G
Sbjct 181 HLASAAAAAAAGTPFSLGFGNLGGGNVGNGNLGAGNFGNGNLGSHNFGFGNLGSNNFGPG 240
Query 202 NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGK 252
N+G+ NIGFGN G N+G+ N G N G NTG+ NIGIG+TG GQIGFG
Sbjct 241 NLGSGNIGFGNAGSFNVGLANTGSNNFGYANTGSNNIGIGLTGTGQIGFGS 291
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G N G GN+G N G+ N GF N G N G+GN GD N G+ N G+ N G
Sbjct 301 LLNSGTGNVGLFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGDYNTGLFNPGDVNTG 360
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/71 (48%), Positives = 40/71 (57%), Gaps = 0/71 (0%)
Query 175 QLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
L + L L N G+GNVG+ N G N+G N G GNRG N G+GN G N G NTG
Sbjct 291 SLNSGLGTLGLLNSGTGNVGLFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGDYNTG 350
Query 235 NWNIGIGITGN 245
+N G TGN
Sbjct 351 LFNPGDVNTGN 361
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/60 (49%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN G N G N G GN GD N G+ N GD N G N+G++N G
Sbjct 311 LFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGDYNTGLFNPGDVNTGNFNSGSFNTG 370
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 37/68 (55%), Gaps = 0/68 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G+G +G N G N+G N G N+GIGN G N G N+G N G+G +G+
Sbjct 289 FGSLNSGLGTLGLLNSGTGNVGLFNSGTGNVGIGNSGSGNRGFFNSGLGNFGVGNSGDYN 348
Query 248 IGFGKPAN 255
G P +
Sbjct 349 TGLFNPGD 356
>gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=681
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 160/263 (61%), Positives = 180/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +LH+AA SF++VT+ LA +W GP
Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLHSAAASFSAVTSQLATGSWQGP 63
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTG 266
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 399 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 426
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 319 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 378
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 379 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 349 NIGFGNKGSHNIGFGNSGNNNI 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 283 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 342
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 343 GNLGSGNIGFGNKGSHNI 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 399 NGNIGFFNSGNNNIGMGNSGN 419
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 259 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 318
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 319 NFGFGNTGNVN---FGNGNTGDTNFGSG 343
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 386 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 445
Query 238 IGIGITG 244
GIG +G
Sbjct 446 TGIGNSG 452
>gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacterium marinum M]
gi|183174979|gb|ACC40089.1| PPE family protein [Mycobacterium marinum M]
Length=2754
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/337 (46%), Positives = 196/337 (59%), Gaps = 67/337 (19%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNFAVLPPE+NSAR+F+GAG GP+LAAA+AW GLA EL +AA +F +VT+GL G++W GP
Sbjct 1 MNFAVLPPEINSARLFSGAGSGPVLAAATAWTGLAAELRSAAAAFLAVTSGLTGNSWRGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
A+ M+ A+ YVGWL+ + A QAA QA+ AA FEA A TV P +VAANR +L SL
Sbjct 61 AAAVMSDVAASYVGWLSASGAHAEQAAEQAKTAAQVFEAARAVTVQPGLVAANRAQLVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPI------------ 168
V +NL GQNAPAIA AEA+YEQ+WAQDV AM YH+ AS+VA L P+
Sbjct 121 VGSNLFGQNAPAIATAEAQYEQMWAQDVVAMLDYHAGASSVAAALTPLSWPTQTLAGLAA 180
Query 169 --------------QEGLQQQLQNVL--AQLASGNLGSGNVGVGNIGNDNIGNANIGFGN 212
G Q + A + NLG GN+G GN+G+ NIG N+G GN
Sbjct 181 PAAALGSVARSISFNVGFANAGQGNVGAANIGDFNLGLGNIGSGNVGSGNIGGINVGSGN 240
Query 213 RGDANIGIGNIGDRNLGIG------------------------------NTGNWNIGIGI 242
RG NIG GN+GD N+G+G NTG+ NIGIG+
Sbjct 241 RGSYNIGPGNLGDYNIGLGNLGDSSVGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGL 300
Query 243 TGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSL 279
+G+GQ+G G N G G L GTD++
Sbjct 301 SGDGQVGIGAL---------NSGTGNIGLFNSGTDNI 328
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L N+G GN+G NIG N+G++N+GFGN GD N+G+GN G N G NTG+ NIG
Sbjct 2439 FGNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIG 2498
Query 240 IGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSL 279
IG++G+GQ+GFG N G G L GTD++
Sbjct 2499 IGLSGDGQVGFGAL---------NSGTGNIGLFNSGTDNI 2529
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 65/120 (55%), Gaps = 29/120 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGD-------------- 225
L + SGN+GSGN+G N+G+ NIG+ NIG N GD NIG+GN+GD
Sbjct 1066 LGNIGSGNVGSGNIGGANVGSGNIGDYNIGPANLGDYNIGLGNLGDSSIGLANAGDHNLG 1125
Query 226 ------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSL 279
N G NTGN NIGIG++G+GQ+GFG N G G L GTD++
Sbjct 1126 VANAGFNNFGFANTGNNNIGIGLSGDGQVGFGAL---------NSGTGNIGLFNSGTDNI 1176
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/115 (43%), Positives = 64/115 (56%), Gaps = 24/115 (20%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG---------------NANIGFGNRGDANIGIGNIG 224
+ + SGN+GS NVG GNIG+ NIG +++IGFGN GD N+G+ N G
Sbjct 1939 FSNVGSGNIGSFNVGSGNIGDYNIGPGNLGDYNIGLGNLGDSSIGFGNAGDHNVGVANAG 1998
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSL 279
N G NTG+ NIGIG+ G+GQ+GFG N G G L GTD++
Sbjct 1999 FNNFGFANTGSNNIGIGLNGDGQVGFGAL---------NSGTGNIGLFNSGTDNI 2044
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/130 (43%), Positives = 70/130 (54%), Gaps = 21/130 (16%)
Query 162 ATQLAPIQEGLQQ-QLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIG 219
AT AP GL NV A + N+GS N+G NIG N+G+ NIG GN GD++IG
Sbjct 1485 ATGHAPFNLGLGNIGFGNVGSANAGNFNVGSANIGDYNIGPGNLGDYNIGLGNLGDSSIG 1544
Query 220 IGNIGDRNLGIGN----------TGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVT 269
+ N GD NLG+ N TGN NIGIG++G+GQ+G G N G G
Sbjct 1545 LANAGDHNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGIGAL---------NSGTGNI 1595
Query 270 ALVMGGTDSL 279
L GTD++
Sbjct 1596 GLFNSGTDNI 1605
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/101 (42%), Positives = 59/101 (59%), Gaps = 1/101 (0%)
Query 160 AVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIG 219
A + + I L L+ Q+ N+G N G GN+G N+G +N+G GN G N+G
Sbjct 1895 AHVSGIGNIGHNLAGLLRGTAGQVPV-NVGFANNGAGNVGFGNVGFSNVGSGNIGSFNVG 1953
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
GNIGD N+G GN G++NIG+G G+ IGFG + +V V
Sbjct 1954 SGNIGDYNIGPGNLGDYNIGLGNLGDSSIGFGNAGDHNVGV 1994
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/71 (48%), Positives = 51/71 (72%), Gaps = 0/71 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
A + N+G GN+G N+G N+G++++G N GD N+G+ N G N G+ NTG+ NIGI
Sbjct 662 ANMGDYNIGPGNLGNYNVGLGNLGDSSVGLANAGDLNVGVANAGSNNFGLANTGSNNIGI 721
Query 241 GITGNGQIGFG 251
G++G+GQ+GFG
Sbjct 722 GLSGDGQVGFG 732
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/117 (37%), Positives = 56/117 (48%), Gaps = 20/117 (17%)
Query 156 SAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIG------ 209
S + LA + G + A L NLGS N+G N+G N G+ANIG
Sbjct 2365 SGIANTGVDLAGVFRGASRIHNLGFANLGIANLGSANIGDLNLGGANFGSANIGSGNIGF 2424
Query 210 --------------FGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGK 252
FGN GD NIG GN+GD N+G+GN G+ N+G G G+ +G G
Sbjct 2425 GNVGGGNVGSLNLGFGNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGN 2481
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 42/64 (66%), Gaps = 0/64 (0%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANP 256
N+G NIG+ N+G GN G AN+G GNIGD N+G N G++NIG+G G+ IG +
Sbjct 1063 NLGLGNIGSGNVGSGNIGGANVGSGNIGDYNIGPANLGDYNIGLGNLGDSSIGLANAGDH 1122
Query 257 DVLV 260
++ V
Sbjct 1123 NLGV 1126
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/69 (43%), Positives = 44/69 (64%), Gaps = 5/69 (7%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N+G+GNIG N+G+AN+G N+G N+GD N+G GN GN+N+G+G G+ +G
Sbjct 638 NLGLGNIGFGNVGSANVG-----SFNVGPANMGDYNIGPGNLGNYNVGLGNLGDSSVGLA 692
Query 252 KPANPDVLV 260
+ +V V
Sbjct 693 NAGDLNVGV 701
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG N G GN GD N GIGN G N G+ N G N G+G
Sbjct 312 NSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVG 371
Query 242 ITGN 245
GN
Sbjct 372 NAGN 375
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG N G GN GD N GIGN G N G+ N G N G+G
Sbjct 1160 NSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVG 1219
Query 242 ITGN 245
GN
Sbjct 1220 NAGN 1223
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG N G GN GD N GIGN G N G+ N G N G+G
Sbjct 1589 NSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVG 1648
Query 242 ITGN 245
GN
Sbjct 1649 NAGN 1652
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG N G GN GD N GIGN G N G+ N G N G+G
Sbjct 2028 NSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVG 2087
Query 242 ITGN 245
GN
Sbjct 2088 NAGN 2091
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 33/53 (63%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GNIG N G NIG N G NIG+ N G + GIGN+GN+N GIG G
Sbjct 2513 NSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIGNAG 2565
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/98 (41%), Positives = 50/98 (52%), Gaps = 3/98 (3%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG--NIGDRNLGIGNTGNWN 237
LA NLG N G N G N GN NIG G GD +GIG N G N+G+ N+G N
Sbjct 1545 LANAGDHNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGIGALNSGTGNIGLFNSGTDN 1604
Query 238 IGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGG 275
IG+ +G G G G + + +GN G T L+ G
Sbjct 1605 IGLFNSGTGNFGIGNSGDYNT-GIGNAGATNTGLLNAG 1641
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/74 (46%), Positives = 40/74 (55%), Gaps = 5/74 (6%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG NIG N G + GIGN G+ N GIGN G N G+
Sbjct 2513 NSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIGNAGATNTGLF 2572
Query 242 ITGNGQIGFGKPAN 255
TG G G N
Sbjct 2573 NTGLVNTGVGNAGN 2586
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (58%), Gaps = 7/75 (9%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIG--NTG 234
+ GNLG NVG GN G+ N+G NA N GF N G NIGIG GD +G G N+G
Sbjct 2456 NIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGIGLSGDGQVGFGALNSG 2515
Query 235 NWNIGIGITGNGQIG 249
NIG+ +G IG
Sbjct 2516 TGNIGLFNSGTDNIG 2530
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/49 (58%), Positives = 29/49 (60%), Gaps = 0/49 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
N G GNIG N G NIG N G N GIGN GD N GIGN G N G+
Sbjct 735 NSGTGNIGLFNSGADNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGL 783
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG--NIGDRNLGIGNTGNWN 237
LA NLG N G N G N GN NIG G GD +G G N G N+G+ N+G N
Sbjct 1116 LANAGDHNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDN 1175
Query 238 IGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGG 275
IG+ +G G G G + + +GN G T L+ G
Sbjct 1176 IGLFNSGTGNFGIGNSGDYNT-GIGNAGATNTGLLNAG 1212
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/64 (49%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G+GN+G+ N G DNIG N G GN GD N GIGN G N G+ N G N G+
Sbjct 735 NSGTGNIGLFNSGADNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVS 794
Query 242 ITGN 245
GN
Sbjct 795 NAGN 798
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 34/60 (57%), Gaps = 0/60 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G N G G+ G N GN N G GN G N G+ N G N G+GN GN+N G
Sbjct 2531 LFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIGNAGATNTGLFNTGLVNTGVGNAGNYNSG 2590
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/111 (37%), Positives = 54/111 (49%), Gaps = 18/111 (16%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNAN-----IGFGNRGDANIGIG------------NIG 224
+ GNLG ++G GN G+ N+G AN GF N G NIGIG N G
Sbjct 1971 NIGLGNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQVGFGALNSG 2030
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMGG 275
N+G+ N+G NIG+ +G G G G + + +GN G T L+ G
Sbjct 2031 TGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNT-GIGNAGATNTGLLNAG 2080
>gi|183984588|ref|YP_001852879.1| PPE family protein [Mycobacterium marinum M]
gi|183177914|gb|ACC43024.1| PPE family protein [Mycobacterium marinum M]
Length=3006
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/311 (51%), Positives = 191/311 (62%), Gaps = 60/311 (19%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+F+V PPE+NSARIF+GAG GP+L+AA+AWDGLA EL +AA +F+SVT+ L G +W GP
Sbjct 1 MSFSVSPPEINSARIFSGAGSGPLLSAAAAWDGLAGELGSAAATFSSVTSALTGSSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AM AS Y+GWL + QA QAA QAR+AA+AFEAT+AATV P V ANRT+L SL
Sbjct 61 ASAAMANVASGYLGWLASTGVQAGQAASQARIAAAAFEATVAATVHPVAVLANRTQLVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQ------ 174
V +NLLG NAPAIA EAEYEQ+WAQDVAAMFGYH+ ASA L P + LQ
Sbjct 121 VTSNLLGFNAPAIATVEAEYEQMWAQDVAAMFGYHTGASAAVAALTPFTQVLQSPAAAAA 180
Query 175 ----------QLQNV----LAQLASGNLG------------------------------- 189
N+ L L GN+G
Sbjct 181 AVQTAIIDFPGRTNIFNAGLGNLGVGNVGFASVGDGNVGGGNLGDGNVGFGNVGGLNFGS 240
Query 190 ---------SGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
SGN+G N G N+G+ NIGFGN GD N+G GN G N+G GN+G+ N+GI
Sbjct 241 GNWGGFNLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGI 300
Query 241 GITGNGQIGFG 251
G+TG+GQ+GFG
Sbjct 301 GLTGSGQVGFG 311
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/65 (62%), Positives = 51/65 (79%), Gaps = 0/65 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLGSGN+G N G N+G+ NIGFGN GD N+G GN G N+G GN+G+ N+GIG+TG+G
Sbjct 1191 NLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGSG 1250
Query 247 QIGFG 251
Q+GFG
Sbjct 1251 QVGFG 1255
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/65 (62%), Positives = 51/65 (79%), Gaps = 0/65 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLGSGN+G N G N+G+ NIGFGN GD N+G GN G N+G GN+G+ N+GIG+TG+G
Sbjct 2119 NLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGSG 2178
Query 247 QIGFG 251
Q+GFG
Sbjct 2179 QVGFG 2183
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 37/68 (55%), Gaps = 7/68 (10%)
Query 180 LAQLASGNLGSGNVGVG-------NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGN 232
+ GN GSGN+G+G G N G+ N+G N GD NIG N G N GI N
Sbjct 738 VGNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGFFNSGSGNFGIAN 797
Query 233 TGNWNIGI 240
+G++N GI
Sbjct 798 SGSFNTGI 805
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 37/68 (55%), Gaps = 7/68 (10%)
Query 180 LAQLASGNLGSGNVGVG-------NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGN 232
+ GN GSGN+G+G G N G+ N+G N GD NIG N G N GI N
Sbjct 1675 VGNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGFFNSGSGNFGIAN 1734
Query 233 TGNWNIGI 240
+G++N GI
Sbjct 1735 SGSFNTGI 1742
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 37/68 (55%), Gaps = 7/68 (10%)
Query 180 LAQLASGNLGSGNVGVG-------NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGN 232
+ GN GSGN+G+G G N G+ N+G N GD NIG N G N GI N
Sbjct 2606 VGNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGFFNSGSGNFGIAN 2665
Query 233 TGNWNIGI 240
+G++N GI
Sbjct 2666 SGSFNTGI 2673
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/71 (47%), Positives = 44/71 (62%), Gaps = 7/71 (9%)
Query 186 GNLGSGNVGVGNIGNDNIGNAN-----IGFGNRGDANIGIGNIGDRNLGIG--NTGNWNI 238
GNLGS N+G GN G+ N+G N IGFGN G N+GIG G +G G N+G+ N+
Sbjct 261 GNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGSGQVGFGGWNSGSGNV 320
Query 239 GIGITGNGQIG 249
G+ +G G +G
Sbjct 321 GLFNSGVGNVG 331
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/71 (47%), Positives = 44/71 (62%), Gaps = 7/71 (9%)
Query 186 GNLGSGNVGVGNIGNDNIGNAN-----IGFGNRGDANIGIGNIGDRNLGIG--NTGNWNI 238
GNLGS N+G GN G+ N+G N IGFGN G N+GIG G +G G N+G+ N+
Sbjct 1205 GNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGSGQVGFGGWNSGSGNV 1264
Query 239 GIGITGNGQIG 249
G+ +G G +G
Sbjct 1265 GLFNSGVGNVG 1275
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/153 (28%), Positives = 60/153 (40%), Gaps = 42/153 (27%)
Query 144 WAQDVAAMFGYHSAASAVA--TQLAPIQEGLQQQLQNVLAQLASGNLGSG---------- 191
W + G+ + S ++ T + + GL+ + L GN+G
Sbjct 2004 WGNVASHASGFENFGSGLSGFTNVGDVLSGLKNTNSSGLGTSGVGNVGDSLSGLFYAGPD 2063
Query 192 -----NVGVGNIGNDNIGNA-------------------------NIGFGNRGDANIGIG 221
N G+GN+G N+G A N G GN G N+G G
Sbjct 2064 RMSIFNAGLGNLGVGNVGFASVGDGNVGGGNLGDGNVGFGNVGGLNFGSGNWGGFNLGSG 2123
Query 222 NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
NIG N G GN G++NIG G G+ +GFG
Sbjct 2124 NIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSG 2156
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (61%), Gaps = 0/48 (0%)
Query 207 NIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G GN G N+G GNIG N G GN G++NIG G G+ +GFG
Sbjct 1181 NFGSGNWGGFNLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSG 1228
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/47 (52%), Positives = 32/47 (69%), Gaps = 2/47 (4%)
Query 206 ANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIGF 250
N GFGN+G NIGIG GD +G G N+G+ N+G+ +G+G IGF
Sbjct 739 GNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGF 785
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/47 (52%), Positives = 32/47 (69%), Gaps = 2/47 (4%)
Query 206 ANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIGF 250
N GFGN+G NIGIG GD +G G N+G+ N+G+ +G+G IGF
Sbjct 1676 GNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGF 1722
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/47 (52%), Positives = 32/47 (69%), Gaps = 2/47 (4%)
Query 206 ANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIGF 250
N GFGN+G NIGIG GD +G G N+G+ N+G+ +G+G IGF
Sbjct 2607 GNFGFGNQGSGNIGIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGF 2653
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/68 (39%), Positives = 38/68 (56%), Gaps = 7/68 (10%)
Query 180 LAQLASGNLGSGNVGVG-------NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGN 232
L + GN GS N+G+G G N G+ N+G N GD N+G+ N G N G+GN
Sbjct 2157 LGNIGFGNSGSNNLGIGLTGSGQVGFGGWNSGSGNVGLFNSGDGNVGLFNSGTGNWGVGN 2216
Query 233 TGNWNIGI 240
+G ++ G+
Sbjct 2217 SGEFDTGL 2224
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/62 (46%), Positives = 37/62 (60%), Gaps = 0/62 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
SGN+G N GVGN+G N G N G GN G+ + G+ N G N G+ N+G N G+G
Sbjct 316 GSGNVGLFNSGVGNVGLFNSGTGNWGVGNSGEFDTGLFNAGRYNTGVFNSGVLNTGVGNA 375
Query 244 GN 245
G+
Sbjct 376 GD 377
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/62 (46%), Positives = 37/62 (60%), Gaps = 0/62 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
SGN+G N GVGN+G N G N G GN G+ + G+ N G N G+ N+G N G+G
Sbjct 1260 GSGNVGLFNSGVGNVGLFNSGTGNWGVGNSGEFDTGLFNAGRYNTGVFNSGVLNTGVGNA 1319
Query 244 GN 245
G+
Sbjct 1320 GD 1321
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/63 (53%), Positives = 38/63 (61%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGNVG+ N G+ NIG N G GN G AN G N G N G+ NTG +N G+ TG G
Sbjct 767 NSGSGNVGLFNSGDGNIGFFNSGSGNFGIANSGSFNTGIANAGLTNTGWFNSGLANTGWG 826
Query 247 QIG 249
G
Sbjct 827 NAG 829
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/63 (53%), Positives = 38/63 (61%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGNVG+ N G+ NIG N G GN G AN G N G N G+ NTG +N G+ TG G
Sbjct 1704 NSGSGNVGLFNSGDGNIGFFNSGSGNFGIANSGSFNTGIANAGLTNTGWFNSGLANTGWG 1763
Query 247 QIG 249
G
Sbjct 1764 NAG 1766
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/63 (53%), Positives = 38/63 (61%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGNVG+ N G+ NIG N G GN G AN G N G N G+ NTG +N G+ TG G
Sbjct 2635 NSGSGNVGLFNSGDGNIGFFNSGSGNFGIANSGSFNTGIANAGLTNTGWFNSGLANTGWG 2694
Query 247 QIG 249
G
Sbjct 2695 NAG 2697
>gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C]
9 more sequence titles
Length=760
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/263 (60%), Positives = 177/263 (68%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 83 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 142
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 143 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 202
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQ------ 174
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 203 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 262
Query 175 ----------QLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 263 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 322
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 323 NIGSYNLGGGNTGDLNPGSGNTG 345
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 418 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 477
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 478 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 505
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 398 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 457
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 458 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 491
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 368 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 427
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 428 NIGFGNKGSHNIGFGNSGNNNI 449
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 362 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 421
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 422 GNLGSGNIGFGNKGSHNI 439
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 338 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 397
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 398 NFGFGNTGNVN---FGNGNTGDTNFGSG 422
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 418 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 477
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 478 NGNIGFFNSGNNNIGMGNSGN 498
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 465 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 524
Query 238 IGIGITG 244
GIG +G
Sbjct 525 TGIGNSG 531
>gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=681
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTG 266
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 399 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 426
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 319 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 378
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 379 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 349 NIGFGNKGSHNIGFGNSGNNNI 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 283 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 342
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 343 GNLGSGNIGFGNKGSHNI 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 399 NGNIGFFNSGNNNIGMGNSGN 419
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 259 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 318
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 319 NFGFGNTGNVN---FGNGNTGDTNFGSG 343
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 386 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 445
Query 238 IGIGITG 244
GIG +G
Sbjct 446 TGIGNSG 452
>gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=681
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 244 NIGSYNLGGGNTGDLNPGSGNTG 266
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 399 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 426
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 319 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 378
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 379 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 349 NIGFGNKGSHNIGFGNSGNNNI 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 283 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 342
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 343 GNLGSGNIGFGNKGSHNI 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 399 NGNIGFFNSGNNNIGMGNSGN 419
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 259 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 318
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 319 NFGFGNTGNVN---FGNGNTGDTNFGSG 343
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 386 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 445
Query 238 IGIGITG 244
GIG +G
Sbjct 446 TGIGNSG 452
>gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length=679
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 242 NIGSYNLGGGNTGDLNPGSGNTG 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 397 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 424
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 317 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 376
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 377 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 410
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 347 NIGFGNKGSHNIGFGNSGNNNI 368
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 281 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 340
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 341 GNLGSGNIGFGNKGSHNI 358
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 397 NGNIGFFNSGNNNIGMGNSGN 417
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 257 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 316
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 317 NFGFGNTGNVN---FGNGNTGDTNFGSG 341
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/72 (44%), Positives = 39/72 (55%), Gaps = 19/72 (26%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIG--------------DRNLGIGN 232
N GSGN+G G N GN NIGF N G+ NIG+GN G +R+ G GN
Sbjct 384 NSGSGNLGFG-----NSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 438
Query 233 TGNWNIGIGITG 244
+G + GIG +G
Sbjct 439 SGELSTGIGNSG 450
>gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=687
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 10 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 69
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 70 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 129
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 130 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 189
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 190 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 249
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 250 NIGSYNLGGGNTGDLNPGSGNTG 272
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 345 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 404
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 405 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 432
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 325 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 384
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 385 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 418
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 295 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 354
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 355 NIGFGNKGSHNIGFGNSGNNNI 376
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 289 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 348
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 349 GNLGSGNIGFGNKGSHNI 366
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 345 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 404
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 405 NGNIGFFNSGNNNIGMGNSGN 425
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 265 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 324
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 325 NFGFGNTGNVN---FGNGNTGDTNFGSG 349
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 392 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 451
Query 238 IGIGITG 244
GIG +G
Sbjct 452 TGIGNSG 458
>gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=679
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 242 NIGSYNLGGGNTGDLNPGSGNTG 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 397 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 424
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 317 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 376
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 377 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 410
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 347 NIGFGNKGSHNIGFGNSGNNNI 368
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 281 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 340
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 341 GNLGSGNIGFGNKGSHNI 358
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 397 NGNIGFFNSGNNNIGMGNSGN 417
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 257 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 316
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 317 NFGFGNTGNVN---FGNGNTGDTNFGSG 341
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 384 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 443
Query 238 IGIGITG 244
GIG +G
Sbjct 444 TGIGNSG 450
>gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
23 more sequence titles
Length=678
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/263 (61%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTG 263
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 396 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 423
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 316 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 375
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 376 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 409
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 346 NIGFGNKGSHNIGFGNSGNNNI 367
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 280 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 339
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 340 GNLGSGNIGFGNKGSHNI 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 396 NGNIGFFNSGNNNIGMGNSGN 416
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 256 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 315
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 316 NFGFGNTGNVN---FGNGNTGDTNFGSG 340
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 383 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 442
Query 238 IGIGITG 244
GIG +G
Sbjct 443 TGIGNSG 449
>gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=678
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/263 (60%), Positives = 179/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA +F++VT+ LA +W GP
Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAAAFSAVTSQLATGSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFE LAATV P V+ANR RL SL
Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEEALAATVHPGAVSANRGRLRSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N+G+ N G+ N+G N GD N+G G
Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNLGSANTGSVNLGSANIGDLNLGSG 240
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTG 263
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 396 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 423
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 316 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 375
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 376 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 409
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 346 NIGFGNKGSHNIGFGNSGNNNI 367
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 280 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 339
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 340 GNLGSGNIGFGNKGSHNI 357
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 396 NGNIGFFNSGNNNIGMGNSGN 416
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 256 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 315
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 316 NFGFGNTGNVN---FGNGNTGDTNFGSG 340
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 383 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 442
Query 238 IGIGITG 244
GIG +G
Sbjct 443 TGIGNSG 449
>gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=681
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 173/343 (51%), Positives = 194/343 (57%), Gaps = 72/343 (20%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 63
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 64 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 123
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 124 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 183
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSG-------------------------NVGVG 196
I G L NV LASGNLG G N+G G
Sbjct 184 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 243
Query 197 NI-------------------------GNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG 231
NI G+ NIG+ N+G GN G N+G GN GD N G G
Sbjct 244 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGG 303
Query 232 NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMG 274
NTGN N+G G TGN GFG N + GNG G T G
Sbjct 304 NTGNLNVGGGNTGNSNFGFGNTGNVN---FGNGNTGDTNFGSG 343
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 399 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 426
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 319 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 378
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 379 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 289 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 348
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 349 NIGFGNKGSHNIGFGNSGNNNI 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 283 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 342
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 343 GNLGSGNIGFGNKGSHNI 360
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 339 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 398
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 399 NGNIGFFNSGNNNIGMGNSGN 419
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 386 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 445
Query 238 IGIGITG 244
GIG +G
Sbjct 446 TGIGNSG 452
>gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21
gi|38684031|emb|CAE55401.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=678
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 173/343 (51%), Positives = 194/343 (57%), Gaps = 72/343 (20%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 61 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSG-------------------------NVGVG 196
I G L NV LASGNLG G N+G G
Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240
Query 197 NI-------------------------GNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG 231
NI G+ NIG+ N+G GN G N+G GN GD N G G
Sbjct 241 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGG 300
Query 232 NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMG 274
NTGN N+G G TGN GFG N + GNG G T G
Sbjct 301 NTGNLNVGGGNTGNSNFGFGNTGNVN---FGNGNTGDTNFGSG 340
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 396 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 423
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 316 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 375
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 376 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 409
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 346 NIGFGNKGSHNIGFGNSGNNNI 367
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 280 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 339
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 340 GNLGSGNIGFGNKGSHNI 357
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 396 NGNIGFFNSGNNNIGMGNSGN 416
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 40/67 (60%), Gaps = 9/67 (13%)
Query 187 NLGSGNVGVGNIGNDNI-----GNANIGFGNRGDA----NIGIGNIGDRNLGIGNTGNWN 237
N GSGN+G GN GN NI GN NIG GN G+ ++ G+ +R+ G GN+G +
Sbjct 383 NSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELS 442
Query 238 IGIGITG 244
GIG +G
Sbjct 443 TGIGNSG 449
>gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=679
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 173/343 (51%), Positives = 194/343 (57%), Gaps = 72/343 (20%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 61
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT A+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 62 ASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 121
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 122 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 181
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSG-------------------------NVGVG 196
I G L NV LASGNLG G N+G G
Sbjct 182 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 241
Query 197 NI-------------------------GNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG 231
NI G+ NIG+ N+G GN G N+G GN GD N G G
Sbjct 242 NIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGG 301
Query 232 NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTALVMG 274
NTGN N+G G TGN GFG N + GNG G T G
Sbjct 302 NTGNLNVGGGNTGNSNFGFGNTGNVN---FGNGNTGDTNFGSG 341
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 397 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 424
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 317 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 376
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 377 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 410
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 287 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 346
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 347 NIGFGNKGSHNIGFGNSGNNNI 368
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 281 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 340
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 341 GNLGSGNIGFGNKGSHNI 358
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 337 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 396
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 397 NGNIGFFNSGNNNIGMGNSGN 417
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/72 (44%), Positives = 39/72 (55%), Gaps = 19/72 (26%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIG--------------DRNLGIGN 232
N GSGN+G G N GN NIGF N G+ NIG+GN G +R+ G GN
Sbjct 384 NSGSGNLGFG-----NSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 438
Query 233 TGNWNIGIGITG 244
+G + GIG +G
Sbjct 439 SGELSTGIGNSG 450
>gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacterium marinum M]
gi|183174892|gb|ACC40002.1| PPE family protein [Mycobacterium marinum M]
Length=679
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/283 (55%), Positives = 187/283 (67%), Gaps = 29/283 (10%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NS RIFAG G GPMLAAA+AWDGLA+EL AA +F+SVT+GL G +W GP
Sbjct 1 MNFSVLPPEINSLRIFAGTGSGPMLAAAAAWDGLADELSTAAAAFSSVTSGLTGGSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
A+ AM AA+PY GWL AA +A + QA++ A+AFEA AATV P +VAANR +L SL
Sbjct 61 AAAAMAAAAAPYAGWLGLAAARAGDVSAQAKVVAAAFEAVRAATVHPMLVAANRAQLVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQ------ 174
V +NLLG NAPAIA EAEYE +WA DVAAM GYH ASA A QLAP Q+ LQ
Sbjct 121 VRSNLLGLNAPAIATTEAEYEAMWAADVAAMVGYHGGASAAAAQLAPWQQWLQSLPGLPG 180
Query 175 ------------------QLQNVLAQLASG-----NLGSGNVGVGNIGNDNIGNANIGFG 211
+ N + + SG NLGSGN G N+G+ N GN N+G G
Sbjct 181 QLAGSATAAAAANGWPNLGIGNTDSNVGSGDVGTQNLGSGNTGNTNLGSGNTGNGNLGSG 240
Query 212 NRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
NRGD+N+G GN+G+ N G GNTGN+N G G G+ +GFG
Sbjct 241 NRGDSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAG 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 52/75 (70%), Gaps = 5/75 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+GNLGSGN G GNIGN N G + N+G NRG N+G GN G+ N+G GNTG+
Sbjct 292 NFGNGNLGSGNTGSGNIGNQNQGWGNQGDNNVGLANRGSDNMGFGNTGNNNVGFGNTGSG 351
Query 237 NIGIGITGNGQIGFG 251
NIGIG+TGN Q+GFG
Sbjct 352 NIGIGLTGNNQMGFG 366
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/72 (55%), Positives = 50/72 (70%), Gaps = 0/72 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G+GN+G GN G+ NIGN N G+GN+GD N+G+ N G N+G GNTGN N+G G TG+G
Sbjct 292 NFGNGNLGSGNTGSGNIGNQNQGWGNQGDNNVGLANRGSDNMGFGNTGNNNVGFGNTGSG 351
Query 247 QIGFGKPANPDV 258
IG G N +
Sbjct 352 NIGIGLTGNNQM 363
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/88 (46%), Positives = 50/88 (57%), Gaps = 11/88 (12%)
Query 184 ASGNLGSGNVGVGNIG------NDNIGNANIGFGNRGDANIG-----IGNIGDRNLGIGN 232
SGN G NVG GN G NDN GN N+G GN G NIG GN GD N+G+ N
Sbjct 268 GSGNHGDNNVGFGNAGLGGTAGNDNFGNGNLGSGNTGSGNIGNQNQGWGNQGDNNVGLAN 327
Query 233 TGNWNIGIGITGNGQIGFGKPANPDVLV 260
G+ N+G G TGN +GFG + ++ +
Sbjct 328 RGSDNMGFGNTGNNNVGFGNTGSGNIGI 355
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/91 (39%), Positives = 46/91 (51%), Gaps = 14/91 (15%)
Query 164 QLAPIQEGLQQQLQNV--LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
+ +G Q N LA S N+G GN G N N+GFGN G NIGIG
Sbjct 307 NIGNQNQGWGNQGDNNVGLANRGSDNMGFGNTG----------NNNVGFGNTGSGNIGIG 356
Query 222 NIGDRNLGIG--NTGNWNIGIGITGNGQIGF 250
G+ +G G N+G+ N+G G +G G +GF
Sbjct 357 LTGNNQMGFGGLNSGSGNLGFGNSGTGNVGF 387
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/66 (47%), Positives = 40/66 (61%), Gaps = 7/66 (10%)
Query 186 GNLGSGNVGVGNIGND-------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNI 238
GN GSGN+G+G GN+ N G+ N+GFGN G N+G N G N GIGN+G +
Sbjct 346 GNTGSGNIGIGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNSGVGNWGIGNSGAIDT 405
Query 239 GIGITG 244
G G +G
Sbjct 406 GFGNSG 411
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/84 (46%), Positives = 43/84 (52%), Gaps = 2/84 (2%)
Query 163 TQLAPIQEGLQQQLQNVLAQL--ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGI 220
T I GL Q L SGNLG GN G GN+G N G N G GN G + G
Sbjct 348 TGSGNIGIGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNSGVGNWGIGNSGAIDTGF 407
Query 221 GNIGDRNLGIGNTGNWNIGIGITG 244
GN G + GIGN+G N GIG +G
Sbjct 408 GNSGFIDTGIGNSGALNTGIGNSG 431
>gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacterium marinum M]
gi|183174486|gb|ACC39596.1| PPE family protein [Mycobacterium marinum M]
Length=608
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/266 (58%), Positives = 182/266 (69%), Gaps = 8/266 (3%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF +LPPE+NSAR+FAGAG GPML+AA AWDGLA EL +AA SF SVT+GL G +W G
Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
A+ AM+ AA+PYV WLN AA +A +AA QA+ SAFEA AA + P VAANR L L
Sbjct 61 AAAAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQ---LQ 177
V NL GQNAPAIAAAE YEQ+WA DVAAM GYH ASA A+ LA Q+ LQ
Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAA 180
Query 178 NVLAQLASGNLGSGNVGVGNIGNDNI-----GNANIGFGNRGDANIGIGNIGDRNLGIGN 232
+V+ L+ GN+G GN+ +GNIG+ N+ GN N+G GN G+AN+G GN G NLG GN
Sbjct 181 SVIPGLSIGNIGVGNLSIGNIGDFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGN 240
Query 233 TGNWNIGIGITGNGQIGFGKPANPDV 258
TGN N G G GN G G N +V
Sbjct 241 TGNTNFGNGNRGNLNWGSGNLGNANV 266
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/63 (59%), Positives = 47/63 (75%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLGSGN+G N GN N+G+ N+G GN G +N+G GN+G NLG GN G+ NIG G+TGN
Sbjct 287 NLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNN 346
Query 247 QIG 249
Q+G
Sbjct 347 QVG 349
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/82 (48%), Positives = 52/82 (64%), Gaps = 7/82 (8%)
Query 184 ASGNLGSGNVGVGNI---GN----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
SGNLG+ NVG GN GN + +G+AN+G GN G+AN G GN+GD NLG GN G
Sbjct 257 GSGNLGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGNANFGNGNLGDTNLGSGNNGFS 316
Query 237 NIGIGITGNGQIGFGKPANPDV 258
N+G G G+ +GFG + ++
Sbjct 317 NVGFGNLGSNNLGFGNNGDNNI 338
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/102 (36%), Positives = 48/102 (48%), Gaps = 24/102 (23%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------- 221
L NLGSGN G N+G N+G+ N+GFGN GD NIG G
Sbjct 301 GNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIG 360
Query 222 -----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N GD N+G N+G+ N+G +G+G GF + +
Sbjct 361 NIGLGNSGDNNVGFFNSGSNNVGFFNSGDGNFGFANAGDTNT 402
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/54 (49%), Positives = 30/54 (56%), Gaps = 0/54 (0%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
N+G N G+ N+GF N GD N G N GD N G N G N G G GN +GF
Sbjct 371 NVGFFNSGSNNVGFFNSGDGNFGFANAGDTNTGFWNAGRVNTGFGNGGNFNLGF 424
>gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=608
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/266 (58%), Positives = 176/266 (67%), Gaps = 8/266 (3%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF +LPPE+NSAR+FAGAG GPML+AA AWDGLA EL +AA SF SVT+GL G +W G
Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
A+ AM+ AA+PYV WLN AA +A +AA QA+ SAFEA AA + P VAANR L L
Sbjct 61 AATAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQ----- 175
V NL GQNAPAIAAAE YEQ+WA DVAAM GYH ASA A+ LA Q+ LQ
Sbjct 121 VLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAA 180
Query 176 ---LQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGN 232
L + GNL GN+GV N+G N GN N+G GN G+AN+G GN G NLG GN
Sbjct 181 SVILGLSIGNTGVGNLSIGNIGVFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGN 240
Query 233 TGNWNIGIGITGNGQIGFGKPANPDV 258
TGN N G G GN G G N +V
Sbjct 241 TGNTNFGNGNRGNLNWGSGNLGNANV 266
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/63 (59%), Positives = 47/63 (75%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLGSGN+G N GN N+G+ N+G GN G +N+G GN+G NLG GN G+ NIG G+TGN
Sbjct 287 NLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNN 346
Query 247 QIG 249
Q+G
Sbjct 347 QVG 349
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/82 (48%), Positives = 52/82 (64%), Gaps = 7/82 (8%)
Query 184 ASGNLGSGNVGVGNI---GN----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
SGNLG+ NVG GN GN + +G+AN+G GN G+AN G GN+GD NLG GN G
Sbjct 257 GSGNLGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGNANFGNGNLGDTNLGSGNNGFS 316
Query 237 NIGIGITGNGQIGFGKPANPDV 258
N+G G G+ +GFG + ++
Sbjct 317 NVGFGNLGSNNLGFGNNGDNNI 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/93 (45%), Positives = 49/93 (53%), Gaps = 17/93 (18%)
Query 177 QNVLAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNR------------GDANIG 219
N L SGN G+ N G GN GN N G NAN+GFGN GDAN+G
Sbjct 230 NNGFFNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGFGNRVGDANLG 289
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGK 252
GN+G+ N G GN G+ N+G G G +GFG
Sbjct 290 SGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGN 322
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/111 (33%), Positives = 48/111 (44%), Gaps = 29/111 (26%)
Query 177 QNVLAQLASGNLGSGNVGVGNIGNDNIG-----------------------------NAN 207
N + + GNLGS N+G GN G++NIG + N
Sbjct 312 NNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIGNIDLGNSGDNN 371
Query 208 IGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+GF N G N+G N GDRN G N+G+ N G G GFG N ++
Sbjct 372 VGFFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNAGRVNTGFGNGGNFNL 422
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/69 (45%), Positives = 39/69 (57%), Gaps = 5/69 (7%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
N G GN+ +GN G++N+G + N+GF N GD N G N GD N G N G N G G
Sbjct 356 NGGIGNIDLGNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNAGRVNTGFG 415
Query 242 ITGNGQIGF 250
GN +GF
Sbjct 416 NGGNFNLGF 424
>gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618324|emb|CAD96242.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=678
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 160/263 (61%), Positives = 180/263 (69%), Gaps = 19/263 (7%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
MNF+VLPPE+NSA +FAGAG GPMLAAASAW GLA +L +AA SF++VT+ LA +W GP
Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGP 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+ Y WL TAA QA QAAGQA+ A SAFEA LAATV P V+ANR RL SL
Sbjct 61 ASAAMTGAAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAP------------- 167
VA+NLLGQNAPAIAA EA YEQ+WA DVAAM GYH ASAVA L P
Sbjct 121 VASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGG 180
Query 168 --IQEGL-QQQLQNVLA---QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG 221
I G L NV LASGNLG GN+G N G+ N G+ N+G N GD N+G G
Sbjct 181 AVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSG 240
Query 222 NIGDRNLGIGNTGNWNIGIGITG 244
NIG NLG GNTG+ N G G TG
Sbjct 241 NIGSYNLGGGNTGDLNPGSGNTG 263
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/89 (52%), Positives = 58/89 (66%), Gaps = 3/89 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITG 244
N GSGN+G GNIG N G+ NIGFGN G+ NIG G GD +G G N+G+ N+G G +G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 245 NGQIGFGKPANPDVLVVGNGGPGVTALVM 273
NG IGF N ++ +GN G GV AL +
Sbjct 396 NGNIGFFNSGNNNI-GMGNSGNGVGALSV 423
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/94 (47%), Positives = 53/94 (57%), Gaps = 1/94 (1%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G GN G N GN N G+ N G GN G NIG GN G N+G GN+GN NIG G+TG+
Sbjct 316 NFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDN 375
Query 247 QIGFGK-PANPDVLVVGNGGPGVTALVMGGTDSL 279
QIGFG + L GN G G G +++
Sbjct 376 QIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNI 409
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 47/82 (58%), Gaps = 5/82 (6%)
Query 182 QLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN G N G GN GN N GN+N GFGN G+ N G GN GD N G GN G+
Sbjct 286 NLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSG 345
Query 237 NIGIGITGNGQIGFGKPANPDV 258
NIG G G+ IGFG N ++
Sbjct 346 NIGFGNKGSHNIGFGNSGNNNI 367
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (62%), Gaps = 0/78 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L S NLGSGN G N G N GN N+G GN G++N G GN G+ N G GNTG+ N G
Sbjct 280 GNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGS 339
Query 241 GITGNGQIGFGKPANPDV 258
G G+G IGFG + ++
Sbjct 340 GNLGSGNIGFGNKGSHNI 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/81 (55%), Positives = 48/81 (60%), Gaps = 7/81 (8%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIG--NIGDRNLGIGNTG 234
SGNLGSGN+G GN G+ NIG N NIGFG GD IG G N G NLG GN+G
Sbjct 336 NFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSG 395
Query 235 NWNIGIGITGNGQIGFGKPAN 255
N NIG +GN IG G N
Sbjct 396 NGNIGFFNSGNNNIGMGNSGN 416
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/88 (52%), Positives = 51/88 (58%), Gaps = 3/88 (3%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N GSGN G N G+ NIG+ N+G GN G N+G GN GD N G GNTGN N+G G TGN
Sbjct 256 NPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNS 315
Query 247 QIGFGKPANPDVLVVGNGGPGVTALVMG 274
GFG N + GNG G T G
Sbjct 316 NFGFGNTGNVN---FGNGNTGDTNFGSG 340
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/72 (44%), Positives = 39/72 (55%), Gaps = 19/72 (26%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIG--------------DRNLGIGN 232
N GSGN+G G N GN NIGF N G+ NIG+GN G +R+ G GN
Sbjct 383 NSGSGNLGFG-----NSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 437
Query 233 TGNWNIGIGITG 244
+G + GIG +G
Sbjct 438 SGELSTGIGNSG 449
>gi|289441734|ref|ZP_06431478.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289414653|gb|EFD11893.1| PPE family protein [Mycobacterium tuberculosis T46]
Length=3485
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/282 (57%), Positives = 190/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR ASL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2400 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2459
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2460 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2519
Query 259 LV 260
+
Sbjct 2520 GI 2521
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2441 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2500
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2501 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2542
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1499 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1558
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1559 NIGFANTGNNNIGIG 1573
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1978 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2037
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2038 NIGIGLSGHNQQGFGS 2053
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1492 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1551
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1552 FANTGNNNIGFANTGNNNIGI 1572
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1938 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1997
Query 247 QIGFGK 252
IG G
Sbjct 1998 NIGLGN 2003
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1947 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2006
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2007 YNFGFGNAGDFNLGFANSGSNNI 2029
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1936 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1995
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1996 NYNIGLGNLGSYNFGFGN 2013
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2488 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2547
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV--VGNGGPGVTALVMG 274
D N G+ N GN+N GI TGN IG N +V + G+G G ++L G
Sbjct 2548 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2599
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/96 (40%), Positives = 56/96 (59%), Gaps = 1/96 (1%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
NIG N+G+ N+G N GN+NIG G G+ GF
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGF 1095
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/93 (44%), Positives = 46/93 (50%), Gaps = 13/93 (13%)
Query 165 LAPIQEGLQQQLQNV-LAQLASGNLGSG------------NVGVGNIGNDNIGNANIGFG 211
+ GL + N+ +GN+G G N G GNIG N G NIGFG
Sbjct 3075 FGNVGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFG 3134
Query 212 NRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G N GIGN GD N GIGNTG+ N G TG
Sbjct 3135 NSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3167
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1443 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1502
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1503 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1560
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/138 (37%), Positives = 65/138 (48%), Gaps = 18/138 (13%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2964 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 3023
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNLGIGNTGNWNIGIGITG---- 244
G NIGN N+G+ANIG N G ANI G NIGD NLG N G+ NIG G G
Sbjct 3024 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3083
Query 245 --NGQIGFGKPANPDVLV 260
G IGFG N ++ +
Sbjct 3084 AAIGNIGFGNTGNGNIGI 3101
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 41/77 (54%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ + GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2631 SNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2690
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2691 GTGNTGIGNSGNYNTGL 2707
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1532 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1591
Query 240 IGITG 244
G +G
Sbjct 1592 SGNSG 1596
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/70 (49%), Positives = 43/70 (62%), Gaps = 0/70 (0%)
Query 175 QLQNVLAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QL A L NLGSGNVG N+ + N G+ NIG N G+ NIG N+G+ N+G GN G
Sbjct 1030 QLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAG 1089
Query 235 NWNIGIGITG 244
++N G TG
Sbjct 1090 DFNQGFANTG 1099
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/101 (42%), Positives = 49/101 (49%), Gaps = 25/101 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2001 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2060
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+G+ N+G NIGIG +G G G G NPDV
Sbjct 2061 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIG---NPDV 2098
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1938 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1993
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/81 (44%), Positives = 41/81 (51%), Gaps = 10/81 (12%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN----------LGIGNT 233
+GN+G N G GNIG N G N G GN GD N GIGN G N GIGN+
Sbjct 3117 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3176
Query 234 GNWNIGIGITGNGQIGFGKPA 254
G++N G+ GN G P
Sbjct 3177 GDYNTGLFNAGNTNTGSFNPG 3197
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/49 (58%), Positives = 32/49 (66%), Gaps = 0/49 (0%)
Query 202 NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
N G ANIG N G N+GIGN G N GIGN+G+ N GIG TG+ GF
Sbjct 1130 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGF 1178
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1575 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1634
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1635 TGIFNTGDVNTGL 1647
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2667 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2726
Query 240 I 240
+
Sbjct 2727 L 2727
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/66 (49%), Positives = 40/66 (61%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G N+G NIG+ N+G+ N+G GN G N+ GN G N+G N GN+NIG GN
Sbjct 1022 NAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNY 1081
Query 247 QIGFGK 252
IGFG
Sbjct 1082 NIGFGN 1087
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2597 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIG 2656
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1130 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1182
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/125 (34%), Positives = 52/125 (42%), Gaps = 48/125 (38%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGD--------------------- 215
+ SGN GS N+G N+GN NIG N NIGFGN GD
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGTTTSDLPTPAQQ 1111
Query 216 ----------------------ANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKP 253
ANIG+ N G N+GIGN+G N GIG +G+G G G
Sbjct 1112 HRHRAVRRHQQAQFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNT 1171
Query 254 ANPDV 258
+ +
Sbjct 1172 GSTNT 1176
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1159 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1218
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1219 YNTGNFSTGF 1228
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3129 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3188
Query 236 WNIG 239
N G
Sbjct 3189 TNTG 3192
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1597 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1656
Query 240 IGITG 244
I TG
Sbjct 1657 IFNTG 1661
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1148 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1207
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1208 IANLGDFNTGFYNTGN 1223
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2677 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2736
Query 240 I 240
I
Sbjct 2737 I 2737
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/109 (36%), Positives = 55/109 (51%), Gaps = 18/109 (16%)
Query 180 LAQLASGNLGSGNV---------------GVGNIGNDNIGNANIGFGNRGDANIGIGNIG 224
L+ +S N G+GN G GN G N G +N+G GN G G+G G
Sbjct 2590 LSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSG 2649
Query 225 DRNLGIG--NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTAL 271
D +GIG N+G++NIG+ +G G +G G +V +GN G G T +
Sbjct 2650 DSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNV-GIGNTGTGNTGI 2697
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2115 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2167
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2664 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2723
Query 247 QIG 249
G
Sbjct 2724 NTG 2726
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1589 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1641
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2135 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2194
Query 242 ITGN 245
I GN
Sbjct 2195 IGGN 2198
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 39/86 (46%), Gaps = 1/86 (1%)
Query 155 HSAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNR 213
H + Q A G N+ L + N+G GN G GN G N G+ N G GN
Sbjct 1112 HRHRAVRRHQQAQFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNT 1171
Query 214 GDANIGIGNIGDRNLGIGNTGNWNIG 239
G N G N G N G+ N G++N G
Sbjct 1172 GSTNTGFFNTGIVNTGVANAGSYNTG 1197
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/127 (34%), Positives = 50/127 (40%), Gaps = 48/127 (37%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN- 235
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTG
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGTT 1101
Query 236 ---------------------------WN---------------IGIGITGNGQIGFGKP 253
WN +GIG +G G G G
Sbjct 1102 TSDLPTPAQQHRHRAVRRHQQAQFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNS 1161
Query 254 ANPDVLV 260
+ + +
Sbjct 1162 GSGNTGI 1168
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/73 (46%), Positives = 37/73 (51%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN N G+G +G G
Sbjct 2051 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGN 2110
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2111 WGLWNPGTGNMGV 2123
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN GN N G NA N G N G+ N G+ NIG N GI N G+
Sbjct 2683 GNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGH 2742
Query 236 WNIG 239
+N G
Sbjct 2743 YNTG 2746
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/57 (46%), Positives = 34/57 (60%), Gaps = 0/57 (0%)
Query 202 NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G NIG N GD N+G GN+G N+ GN G++NIG GN IGF N ++
Sbjct 1027 NLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNI 1083
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/66 (46%), Positives = 36/66 (55%), Gaps = 6/66 (9%)
Query 181 AQLASG-NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
AQ A G N G+ N+G+ N G +N+G N G GN G N GIGN G N G NTG
Sbjct 1123 AQFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1182
Query 235 NWNIGI 240
N G+
Sbjct 1183 IVNTGV 1188
>gi|289748838|ref|ZP_06508216.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289689425|gb|EFD56854.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=3125
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/282 (57%), Positives = 190/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR ASL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2412 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2471
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2472 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2531
Query 259 LV 260
+
Sbjct 2532 GI 2533
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2453 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2512
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2513 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2554
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1990 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2049
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2050 NIGIGLSGHNQQGFGS 2065
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1950 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 2009
Query 247 QIGFGK 252
IG G
Sbjct 2010 NIGLGN 2015
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1959 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2018
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2019 YNFGFGNAGDFNLGFANSGSNNI 2041
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1948 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 2007
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 2008 NYNIGLGNLGSYNFGFGN 2025
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/96 (43%), Positives = 48/96 (50%), Gaps = 22/96 (22%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2500 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2559
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
D N G+ N GN+N GI TGN IG N +V +
Sbjct 2560 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGI 2595
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/75 (51%), Positives = 47/75 (63%), Gaps = 6/75 (8%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG------ 234
A + + NLGS N+GV N+G+ NIG+ N+G N GD N+G NIG N+G GN G
Sbjct 3038 ANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAA 3097
Query 235 NWNIGIGITGNGQIG 249
NIG G TGNG IG
Sbjct 3098 IGNIGFGNTGNGNIG 3112
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/59 (51%), Positives = 41/59 (70%), Gaps = 0/59 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
N G+ N+G N+G+ N G N G+ N GI N G+ N+G+ NTGN N+GIG+TG+G GF
Sbjct 2547 NAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGF 2605
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/64 (54%), Positives = 43/64 (68%), Gaps = 6/64 (9%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDR------NLGIGNTGNWNIGI 240
NLGS N+G N+G+ NIG+ N+G N G +NIG GN+G N+G GNTGN NIGI
Sbjct 3054 NLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGI 3113
Query 241 GITG 244
+TG
Sbjct 3114 WLTG 3117
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 46/100 (46%), Gaps = 25/100 (25%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N GN NIGF N G+ NIGIG
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G IG G
Sbjct 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNIGIGNSG 1633
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 41/77 (54%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ + GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2643 SNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2702
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2703 GTGNTGIGNSGNYNTGL 2719
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/65 (53%), Positives = 37/65 (57%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1609 LFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1668
Query 240 IGITG 244
I TG
Sbjct 1669 IFNTG 1673
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/77 (51%), Positives = 41/77 (54%), Gaps = 2/77 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G NIGIGN G N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNIGIGNSGTGN 1636
Query 228 LGIGNTGNWNIGIGITG 244
GI NTG+ N GI TG
Sbjct 1637 WGIANTGDTNTGIFNTG 1653
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNIG--------------------NANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NIG ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/101 (42%), Positives = 49/101 (49%), Gaps = 25/101 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2013 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2072
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+G+ N+G NIGIG +G G G G NPDV
Sbjct 2073 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIG---NPDV 2110
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/138 (34%), Positives = 66/138 (48%), Gaps = 15/138 (10%)
Query 138 AEYEQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVG 194
+ WA ++ ++ A A + L I L LQN + ++G N+G
Sbjct 2973 GSLQSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTF-SVGLANLG 3031
Query 195 VGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N+G+ NIGN N+G N G N+G NIGD NLG N G++N+G G+ IGFG
Sbjct 3032 FWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNV- 3090
Query 255 NPDVLVVGNGGPGVTALV 272
GPG+TA +
Sbjct 3091 ----------GPGLTAAI 3098
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1950 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 2005
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2679 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2738
Query 240 I 240
+
Sbjct 2739 L 2739
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/58 (54%), Positives = 34/58 (59%), Gaps = 0/58 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIG 249
N G GN G N G NIG N G NIGIGN G N+GIGN+G N GI TG+ G
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTG 1648
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2609 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIG 2668
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2689 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2748
Query 240 I 240
I
Sbjct 2749 I 2749
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2127 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2179
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/109 (36%), Positives = 55/109 (51%), Gaps = 18/109 (16%)
Query 180 LAQLASGNLGSGNV---------------GVGNIGNDNIGNANIGFGNRGDANIGIGNIG 224
L+ +S N G+GN G GN G N G +N+G GN G G+G G
Sbjct 2602 LSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSG 2661
Query 225 DRNLGIG--NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTAL 271
D +GIG N+G++NIG+ +G G +G G +V +GN G G T +
Sbjct 2662 DSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNV-GIGNTGTGNTGI 2709
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2676 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2735
Query 247 QIG 249
G
Sbjct 2736 NTG 2738
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2147 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2206
Query 242 ITGN 245
I GN
Sbjct 2207 IGGN 2210
>gi|289752384|ref|ZP_06511762.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289692971|gb|EFD60400.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=3487
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/282 (57%), Positives = 190/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR ASL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFASL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Query 259 LV 260
+
Sbjct 2522 GI 2523
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2544
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV--VGNGGPGVTALVMG 274
D N G+ N GN+N GI TGN IG N +V + G+G G ++L G
Sbjct 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/93 (44%), Positives = 46/93 (50%), Gaps = 13/93 (13%)
Query 165 LAPIQEGLQQQLQNV-LAQLASGNLGSG------------NVGVGNIGNDNIGNANIGFG 211
+ GL + N+ +GN+G G N G GNIG N G NIGFG
Sbjct 3077 FGNVGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFG 3136
Query 212 NRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G N GIGN GD N GIGNTG+ N G TG
Sbjct 3137 NSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3169
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/138 (37%), Positives = 65/138 (48%), Gaps = 18/138 (13%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2966 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 3025
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNLGIGNTGNWNIGIGITG---- 244
G NIGN N+G+ANIG N G ANI G NIGD NLG N G+ NIG G G
Sbjct 3026 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3085
Query 245 --NGQIGFGKPANPDVLV 260
G IGFG N ++ +
Sbjct 3086 AAIGNIGFGNTGNGNIGI 3103
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 41/77 (54%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ + GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2633 SNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2692
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2693 GTGNTGIGNSGNYNTGL 2709
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/81 (44%), Positives = 41/81 (51%), Gaps = 10/81 (12%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN----------LGIGNT 233
+GN+G N G GNIG N G N G GN GD N GIGN G N GIGN+
Sbjct 3119 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3178
Query 234 GNWNIGIGITGNGQIGFGKPA 254
G++N G+ GN G P
Sbjct 3179 GDYNTGLFNAGNTNTGSFNPG 3199
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2669 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2728
Query 240 I 240
+
Sbjct 2729 L 2729
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2599 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIG 2658
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3131 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3190
Query 236 WNIG 239
N G
Sbjct 3191 TNTG 3194
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 37/70 (53%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG---------------NANIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G + N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANGGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2679 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2738
Query 240 I 240
I
Sbjct 2739 I 2739
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/109 (36%), Positives = 55/109 (51%), Gaps = 18/109 (16%)
Query 180 LAQLASGNLGSGNV---------------GVGNIGNDNIGNANIGFGNRGDANIGIGNIG 224
L+ +S N G+GN G GN G N G +N+G GN G G+G G
Sbjct 2592 LSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSG 2651
Query 225 DRNLGIG--NTGNWNIGIGITGNGQIGFGKPANPDVLVVGNGGPGVTAL 271
D +GIG N+G++NIG+ +G G +G G +V +GN G G T +
Sbjct 2652 DSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNV-GIGNTGTGNTGI 2699
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/81 (41%), Positives = 39/81 (49%), Gaps = 10/81 (12%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------NIGDRNLG 229
+ +GN G GN G GN G N G+ N GF N G N G+ N GD N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANGGSYNTGWYNTGDTNTG 1209
Query 230 IGNTGNWNIGIGITGNGQIGF 250
I N G++N G TGN GF
Sbjct 1210 IANLGDFNTGFYNTGNFSTGF 1230
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2666 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2725
Query 247 QIG 249
G
Sbjct 2726 NTG 2728
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2067 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVA 2126
Query 247 QIG 249
+G
Sbjct 2127 NVG 2129
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN GN N G NA N G N G+ N G+ NIG N GI N G+
Sbjct 2685 GNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGH 2744
Query 236 WNIG 239
+N G
Sbjct 2745 YNTG 2748
>gi|308379758|ref|ZP_07669042.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308363761|gb|EFP52612.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=2358
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1498 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1557
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1558 NIGFANTGNNNIGIG 1572
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1977 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2036
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2037 NIGIGLSGHNQQGFGS 2052
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1491 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1550
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1551 FANTGNNNIGFANTGNNNIGI 1571
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1937 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1996
Query 247 QIGFGK 252
IG G
Sbjct 1997 NIGLGN 2002
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1946 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2005
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2006 YNFGFGNAGDFNLGFANSGSNNI 2028
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1935 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1994
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1995 NYNIGLGNLGSYNFGFGN 2012
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1442 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1501
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1502 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1559
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1531 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1590
Query 240 IGITG 244
G +G
Sbjct 1591 SGNSG 1595
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2000 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2059
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2060 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2096
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1937 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1992
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1574 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1633
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1634 TGIFNTGDVNTGL 1646
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2050 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2109
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2110 WGLWNPGTGNMGV 2122
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/70 (48%), Positives = 37/70 (53%), Gaps = 5/70 (7%)
Query 186 GNLGSGNVGVGNIGNDNIGN-----ANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
GN GSGN G+GN G+ N G N G N G N G N GD N GI N G++N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 241 GITGNGQIGF 250
TGN GF
Sbjct 1221 YNTGNFSTGF 1230
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1596 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1655
Query 240 IGITG 244
I TG
Sbjct 1656 IFNTG 1660
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2114 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2166
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1588 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1640
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2134 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2193
Query 242 ITGN 245
I GN
Sbjct 2194 IGGN 2197
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2064 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVA 2123
Query 247 QIG 249
+G
Sbjct 2124 NVG 2126
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (65%), Gaps = 0/54 (0%)
Query 186 GNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
GN G+GN G+ N G N+G AN+G N G N+G N G N+GI NTG++N G
Sbjct 2103 GNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTG 2156
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 34/59 (58%), Gaps = 0/59 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ GN G GN G+GN G N G N G GN G N G GN+G N+G NTG +N+G
Sbjct 2078 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2136
>gi|183985015|ref|YP_001853306.1| PPE family protein [Mycobacterium marinum M]
gi|183178341|gb|ACC43451.1| PPE family protein [Mycobacterium marinum M]
Length=537
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/352 (48%), Positives = 204/352 (58%), Gaps = 43/352 (12%)
Query 3 FAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGPAS 62
F +LPPE+NS R+F GAG PML A++AW+GLAEEL AAA SF++VT+GLAG AW G AS
Sbjct 4 FPMLPPEINSLRMFNGAGSTPMLQASAAWNGLAEELGAAADSFSAVTSGLAGQAWQGAAS 63
Query 63 LAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASLVA 122
AMT AASPY GWL+ AA +AA AAGQA+ ASAFEA A + P VAANR LV
Sbjct 64 AAMTAAASPYAGWLSAAAARAAGAAGQAQAVASAFEAARMAMIHPLAVAANRNVFVQLVR 123
Query 123 ANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGLQQQLQNV--L 180
+N G NAPAI AAE++YE++WA DVAAM GYHS SA A L P Q+ L Q L N+
Sbjct 124 SNFFGFNAPAIMAAESQYEEMWAADVAAMTGYHSGVSAAAASLNPFQQ-LLQALPNIGLG 182
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
+ +GN+GSGN G NIGN N G++N G GN G NIG GN+G N G GN GN NIG
Sbjct 183 NKGGTGNIGSGNTGSTNIGNGNTGSSNFGGGNVGSNNIGDGNLGSGNWGSGNLGNENIGF 242
Query 241 GIT------------------GNGQIGFGKPANPDVLVVGNGGPGVTALVMGGTDSLLPL 282
G T GNG G G + +V GN G G + G D+L+
Sbjct 243 GNTGNPLTSSNPGINFGLGNWGNGNFGIGNRGDLNV-GAGNSGDGNLGFGLTG-DNLV-- 298
Query 283 PNIPLLEYAARFITPVHPGYTATFLETPSQFFPFTGLNSLTYDVSVAQGVTN 334
G+ + ++ + F F GLNS T + + TN
Sbjct 299 ------------------GFGNAYYDSTTGQFTFNGLNSGTGNFGIGNSGTN 332
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query 180 LAQLASGNLGSGNVGVGN--IGNDNIGNA-------------NIGFGNRGDANIGIGNIG 224
GN G+GNVG GN IGN +GN+ N GFGN G N G N G
Sbjct 357 FGNFGVGNSGTGNVGFGNSDIGNFGVGNSGVLNTGFFNSASGNTGFGNAGSTNTGFLNSG 416
Query 225 DRNLGIGNTGNWNIGI 240
D N G GN+G+ N G+
Sbjct 417 DVNTGSGNSGHTNTGL 432
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/93 (36%), Positives = 43/93 (47%), Gaps = 21/93 (22%)
Query 187 NLGSGNVGVGNIGNDNIG------------NA---------NIGFGNRGDANIGIGNIGD 225
N G+GN G+GN G +NIG NA N G GN G N+G GN
Sbjct 318 NSGTGNFGIGNSGTNNIGFFNSGNGNFGVFNAGLSSTSAFGNFGVGNSGTGNVGFGNSDI 377
Query 226 RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G+GN+G N G + +G GFG + +
Sbjct 378 GNFGVGNSGVLNTGFFNSASGNTGFGNAGSTNT 410
>gi|289756421|ref|ZP_06515799.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711985|gb|EFD75997.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=2568
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/120 (45%), Positives = 67/120 (56%), Gaps = 17/120 (14%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/101 (45%), Positives = 53/101 (53%), Gaps = 31/101 (30%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG-------------------------------NANIG 209
A L S NLG+ NVG GNIGN NIG N NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 210 FGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
GN G+ NIG GN G+ N+G+ NTGN N+GIG+TG+G GF
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGF 2543
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/92 (43%), Positives = 47/92 (52%), Gaps = 16/92 (17%)
Query 165 LAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIG 219
+A GL + N+ GN G+ N+GVGN GN NIG N NIG N G+ N+G
Sbjct 2477 IANTGPGLTAAVNNI----GIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVG 2532
Query 220 IGNIGDR-------NLGIGNTGNWNIGIGITG 244
IG GD N G GNTG +N G TG
Sbjct 2533 IGLTGDGLSGFSSLNSGAGNTGFFNSGTANTG 2564
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2067 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMG 2124
>gi|289572940|ref|ZP_06453167.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537371|gb|EFD41949.1| PE family protein [Mycobacterium tuberculosis K85]
Length=3507
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Query 259 LV 260
+
Sbjct 2522 GI 2523
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2544
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/77 (56%), Positives = 50/77 (65%), Gaps = 6/77 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG------NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
A + NLGS N+G NIG N+G NIGFGN G+ NIGIGN G N+G GNTG
Sbjct 3058 ANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTG 3117
Query 235 NWNIGIGITGNGQIGFG 251
N NIGIG+TG+ GFG
Sbjct 3118 NGNIGIGLTGDTMTGFG 3134
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNSGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 52/81 (65%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN+G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNSGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/73 (55%), Positives = 45/73 (62%), Gaps = 2/73 (2%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIG 241
A GN+G GN G GNIG N G NIGFGN G+ NIGIG GD G G N+G NIG+
Sbjct 3087 AIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLF 3146
Query 242 ITGNGQIGFGKPA 254
+G G IGFG
Sbjct 3147 NSGTGNIGFGNSG 3159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/158 (36%), Positives = 69/158 (44%), Gaps = 38/158 (24%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2966 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 3025
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNL-------------------- 228
G NIGN N+G+ANIG N G ANI G NIGD NL
Sbjct 3026 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3085
Query 229 ------GIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
G GNTGN NIGIG TG G IGFG N ++ +
Sbjct 3086 AAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGI 3123
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV--VGNGGPGVTALVMG 274
D N G+ N GN+N GI TGN IG N +V + G+G G ++L G
Sbjct 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 45/83 (55%), Gaps = 12/83 (14%)
Query 180 LAQLASGNLGSGNVGVGNIG----ND--------NIGNANIGFGNRGDANIGIGNIGDRN 227
+ +GN+G GN G GNIG D N G NIG N G NIG GN G N
Sbjct 3103 IGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGN 3162
Query 228 LGIGNTGNWNIGIGITGNGQIGF 250
GIGN+G++N GIG TG+ GF
Sbjct 3163 WGIGNSGDYNTGIGNTGSTNSGF 3185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GNIG N G NIGFGN G N GIGN GD N GIGNTG+ N G TG
Sbjct 3137 NSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3189
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 63/118 (54%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G +G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNSGDFNLGFANTGNNNI 1562
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 46/79 (59%), Gaps = 7/79 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFG--NRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GNVG+GN+G G ++ +G G N G NIG+ N G N+GIGN+G N+G
Sbjct 2629 NSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVG 2688
Query 240 IGITGNGQIGFGKPANPDV 258
IG TG G G G N +
Sbjct 2689 IGNTGTGNTGIGNSGNYNT 2707
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 40/77 (52%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2633 GNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2692
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2693 GTGNTGIGNSGNYNTGL 2709
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/75 (47%), Positives = 40/75 (54%), Gaps = 0/75 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
+GN+G N G GNIG N G N G GN GD N GIGN G N G NTG N GIG +
Sbjct 3139 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3198
Query 244 GNGQIGFGKPANPDV 258
G+ G N +
Sbjct 3199 GDYNTGLFNAGNTNT 3213
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNIG--------------------NANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NIG ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNSGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 46/82 (57%), Gaps = 3/82 (3%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIG 249
N G GN G N G N+G GN G G+G GD +GIG N+G++NIG+ +G G +G
Sbjct 2619 NSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVG 2678
Query 250 FGKPANPDVLVVGNGGPGVTAL 271
G +V +GN G G T +
Sbjct 2679 IGNSGTGNV-GIGNTGTGNTGI 2699
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2669 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2728
Query 240 I 240
+
Sbjct 2729 L 2729
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2599 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIG 2658
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3151 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3210
Query 236 WNIG 239
N G
Sbjct 3211 TNTG 3214
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2679 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2738
Query 240 I 240
I
Sbjct 2739 I 2739
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2666 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2725
Query 247 QIG 249
G
Sbjct 2726 NTG 2728
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2067 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMG 2124
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN GN N G NA N G N G+ N G+ NIG N GI N G+
Sbjct 2685 GNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGH 2744
Query 236 WNIG 239
+N G
Sbjct 2745 YNTG 2748
>gi|289760466|ref|ZP_06519844.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289707972|gb|EFD71988.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length=2823
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Query 259 LV 260
+
Sbjct 2522 GI 2523
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2544
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/96 (43%), Positives = 48/96 (50%), Gaps = 22/96 (22%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
D N G+ N GN+N GI TGN IG N +V +
Sbjct 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGI 2585
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/59 (51%), Positives = 41/59 (70%), Gaps = 0/59 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
N G+ N+G N+G+ N G N G+ N GI N G+ N+G+ NTGN N+GIG+TG+G GF
Sbjct 2537 NAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGF 2595
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 46/79 (59%), Gaps = 7/79 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFG--NRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GNVG+GN+G G ++ +G G N G NIG+ N G N+GIGN+G N+G
Sbjct 2629 NSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVG 2688
Query 240 IGITGNGQIGFGKPANPDV 258
IG TG G G G N +
Sbjct 2689 IGNTGTGNTGIGNSGNYNT 2707
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 40/77 (52%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2633 GNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2692
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2693 GTGNTGIGNSGNYNTGL 2709
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 46/82 (57%), Gaps = 3/82 (3%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIG 249
N G GN G N G N+G GN G G+G GD +GIG N+G++NIG+ +G G +G
Sbjct 2619 NSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVG 2678
Query 250 FGKPANPDVLVVGNGGPGVTAL 271
G +V +GN G G T +
Sbjct 2679 IGNSGTGNV-GIGNTGTGNTGI 2699
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/59 (53%), Positives = 35/59 (60%), Gaps = 5/59 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
N GSGN G+ N G +NIG NIG GN G N GI N GD N GI NTG+ N G+
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2669 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2728
Query 240 I 240
+
Sbjct 2729 L 2729
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2599 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIG 2658
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2679 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2738
Query 240 I 240
I
Sbjct 2739 I 2739
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2666 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2725
Query 247 QIG 249
G
Sbjct 2726 NTG 2728
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
>gi|294995112|ref|ZP_06800803.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|326902181|gb|EGE49114.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339293410|gb|AEJ45521.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=3243
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/120 (45%), Positives = 67/120 (56%), Gaps = 17/120 (14%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/77 (56%), Positives = 50/77 (65%), Gaps = 6/77 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG------NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
A + NLGS N+G NIG N+G NIGFGN G+ NIGIGN G N+G GNTG
Sbjct 3006 ANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTG 3065
Query 235 NWNIGIGITGNGQIGFG 251
N NIGIG+TG+ GFG
Sbjct 3066 NGNIGIGLTGDTMTGFG 3082
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/101 (45%), Positives = 53/101 (53%), Gaps = 31/101 (30%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG-------------------------------NANIG 209
A L S NLG+ NVG GNIGN NIG N NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 210 FGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF 250
GN G+ NIG GN G+ N+G+ NTGN N+GIG+TG+G GF
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGF 2543
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/73 (55%), Positives = 45/73 (62%), Gaps = 2/73 (2%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIG 241
A GN+G GN G GNIG N G NIGFGN G+ NIGIG GD G G N+G NIG+
Sbjct 3035 AIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLF 3094
Query 242 ITGNGQIGFGKPA 254
+G G IGFG
Sbjct 3095 NSGTGNIGFGNSG 3107
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/158 (36%), Positives = 69/158 (44%), Gaps = 38/158 (24%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2914 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 2973
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNL-------------------- 228
G NIGN N+G+ANIG N G ANI G NIGD NL
Sbjct 2974 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3033
Query 229 ------GIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
G GNTGN NIGIG TG G IGFG N ++ +
Sbjct 3034 AAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGI 3071
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 45/83 (55%), Gaps = 12/83 (14%)
Query 180 LAQLASGNLGSGNVGVGNIG----ND--------NIGNANIGFGNRGDANIGIGNIGDRN 227
+ +GN+G GN G GNIG D N G NIG N G NIG GN G N
Sbjct 3051 IGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGN 3110
Query 228 LGIGNTGNWNIGIGITGNGQIGF 250
GIGN+G++N GIG TG+ GF
Sbjct 3111 WGIGNSGDYNTGIGNTGSTNSGF 3133
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GNIG N G NIGFGN G N GIGN GD N GIGNTG+ N G TG
Sbjct 3085 NSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3137
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 46/79 (59%), Gaps = 7/79 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFG--NRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GNVG+GN+G G ++ +G G N G NIG+ N G N+GIGN+G N+G
Sbjct 2577 NSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVG 2636
Query 240 IGITGNGQIGFGKPANPDV 258
IG TG G G G N +
Sbjct 2637 IGNTGTGNTGIGNSGNYNT 2655
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 40/77 (52%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2581 GNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2640
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2641 GTGNTGIGNSGNYNTGL 2657
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/75 (47%), Positives = 40/75 (54%), Gaps = 0/75 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
+GN+G N G GNIG N G N G GN GD N GIGN G N G NTG N GIG +
Sbjct 3087 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3146
Query 244 GNGQIGFGKPANPDV 258
G+ G N +
Sbjct 3147 GDYNTGLFNAGNTNT 3161
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNIG--------------------NANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NIG ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 46/82 (57%), Gaps = 3/82 (3%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIG 249
N G GN G N G N+G GN G G+G GD +GIG N+G++NIG+ +G G +G
Sbjct 2567 NSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVG 2626
Query 250 FGKPANPDVLVVGNGGPGVTAL 271
G +V +GN G G T +
Sbjct 2627 IGNSGTGNV-GIGNTGTGNTGI 2647
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2617 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2676
Query 240 I 240
+
Sbjct 2677 L 2677
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2547 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIG 2606
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/92 (43%), Positives = 47/92 (52%), Gaps = 16/92 (17%)
Query 165 LAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIG 219
+A GL + N+ GN G+ N+GVGN GN NIG N NIG N G+ N+G
Sbjct 2477 IANTGPGLTAAVNNI----GIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVG 2532
Query 220 IGNIGDR-------NLGIGNTGNWNIGIGITG 244
IG GD N G GNTG +N G TG
Sbjct 2533 IGLTGDGLSGFSSLNSGAGNTGFFNSGTANTG 2564
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3099 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3158
Query 236 WNIG 239
N G
Sbjct 3159 TNTG 3162
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2627 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2686
Query 240 I 240
I
Sbjct 2687 I 2687
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/81 (44%), Positives = 41/81 (51%), Gaps = 2/81 (2%)
Query 171 GLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNL 228
GL Q + SG N+G N G GN+G N G N+G GN G N GIGN G+ N
Sbjct 2596 GLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNT 2655
Query 229 GIGNTGNWNIGIGITGNGQIG 249
G+ N G N GI GN G
Sbjct 2656 GLLNAGLVNTGIANPGNHNTG 2676
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/108 (35%), Positives = 48/108 (45%), Gaps = 27/108 (25%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFG----------------------NRG 214
+ GN G+ N+G GN GN+NIG N N+G G N G
Sbjct 2500 NIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSG 2559
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
AN G+ N G N G+ N+G N+GIG G G G G + V + G
Sbjct 2560 TANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGG 2607
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
>gi|31791532|ref|NP_854025.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31617118|emb|CAD93225.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=3507
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Query 259 LV 260
+
Sbjct 2522 GI 2523
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2544
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/77 (56%), Positives = 50/77 (65%), Gaps = 6/77 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG------NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
A + NLGS N+G NIG N+G NIGFGN G+ NIGIGN G N+G GNTG
Sbjct 3058 ANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTG 3117
Query 235 NWNIGIGITGNGQIGFG 251
N NIGIG+TG+ GFG
Sbjct 3118 NGNIGIGLTGDTMTGFG 3134
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/73 (55%), Positives = 45/73 (62%), Gaps = 2/73 (2%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIG 241
A GN+G GN G GNIG N G NIGFGN G+ NIGIG GD G G N+G NIG+
Sbjct 3087 AIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLF 3146
Query 242 ITGNGQIGFGKPA 254
+G G IGFG
Sbjct 3147 NSGTGNIGFGNSG 3159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/158 (36%), Positives = 69/158 (44%), Gaps = 38/158 (24%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2966 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 3025
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNL-------------------- 228
G NIGN N+G+ANIG N G ANI G NIGD NL
Sbjct 3026 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3085
Query 229 ------GIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
G GNTGN NIGIG TG G IGFG N ++ +
Sbjct 3086 AAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGI 3123
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV--VGNGGPGVTALVMG 274
D N G+ N GN+N GI TGN IG N +V + G+G G ++L G
Sbjct 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 45/83 (55%), Gaps = 12/83 (14%)
Query 180 LAQLASGNLGSGNVGVGNIG----ND--------NIGNANIGFGNRGDANIGIGNIGDRN 227
+ +GN+G GN G GNIG D N G NIG N G NIG GN G N
Sbjct 3103 IGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGN 3162
Query 228 LGIGNTGNWNIGIGITGNGQIGF 250
GIGN+G++N GIG TG+ GF
Sbjct 3163 WGIGNSGDYNTGIGNTGSTNSGF 3185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GNIG N G NIGFGN G N GIGN GD N GIGNTG+ N G TG
Sbjct 3137 NSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3189
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 46/79 (59%), Gaps = 7/79 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFG--NRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GNVG+GN+G G ++ +G G N G NIG+ N G N+GIGN+G N+G
Sbjct 2629 NSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVG 2688
Query 240 IGITGNGQIGFGKPANPDV 258
IG TG G G G N +
Sbjct 2689 IGNTGTGNTGIGNSGNYNT 2707
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 40/77 (52%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2633 GNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2692
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2693 GTGNTGIGNSGNYNTGL 2709
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/75 (47%), Positives = 40/75 (54%), Gaps = 0/75 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
+GN+G N G GNIG N G N G GN GD N GIGN G N G NTG N GIG +
Sbjct 3139 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3198
Query 244 GNGQIGFGKPANPDV 258
G+ G N +
Sbjct 3199 GDYNTGLFNAGNTNT 3213
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 46/82 (57%), Gaps = 3/82 (3%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIG 249
N G GN G N G N+G GN G G+G GD +GIG N+G++NIG+ +G G +G
Sbjct 2619 NSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVG 2678
Query 250 FGKPANPDVLVVGNGGPGVTAL 271
G +V +GN G G T +
Sbjct 2679 IGNSGTGNV-GIGNTGTGNTGI 2699
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2669 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2728
Query 240 I 240
+
Sbjct 2729 L 2729
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2599 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIG 2658
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3151 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3210
Query 236 WNIG 239
N G
Sbjct 3211 TNTG 3214
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2679 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2738
Query 240 I 240
I
Sbjct 2739 I 2739
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2666 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2725
Query 247 QIG 249
G
Sbjct 2726 NTG 2728
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2067 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMG 2124
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN GN N G NA N G N G+ N G+ NIG N GI N G+
Sbjct 2685 GNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGH 2744
Query 236 WNIG 239
+N G
Sbjct 2745 YNTG 2748
>gi|121636268|ref|YP_976491.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988740|ref|YP_002643427.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491915|emb|CAL70378.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771853|dbj|BAH24659.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600284|emb|CCC62954.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=3507
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/122 (44%), Positives = 68/122 (56%), Gaps = 17/122 (13%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S S V L + G N LA L N+GS N+G N+G+ N+GN+N+GFGN G
Sbjct 2402 SGLSNVGADLTGVLRGPNGSTFNAGLANLGQFNVGSANLGSANLGSANLGNSNVGFGNIG 2461
Query 215 DANIGIGNIGD----------------RNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
+ANIG NIGD N+GIGNTGN+NIG+G TGN IGFG N ++
Sbjct 2462 NANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNI 2521
Query 259 LV 260
+
Sbjct 2522 GI 2523
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/103 (50%), Positives = 61/103 (60%), Gaps = 22/103 (21%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIG---------------------FGNRGDANIG 219
A L S NLG+ NVG GNIGN NIG ANIG GN G+ NIG
Sbjct 2443 ANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIG 2502
Query 220 IGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLVVG 262
+GN G+ N+G GNTGN NIGIG++G+ QIGFG P N + +G
Sbjct 2503 VGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFG-PLNAGIANMG 2544
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 57/86 (67%), Gaps = 2/86 (2%)
Query 177 QNVLA--QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
QN+L + S N+GSGN+GV N+G+ ++GN NIG GN G NIG GN+GD N+G GN G
Sbjct 576 QNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAG 635
Query 235 NWNIGIGITGNGQIGFGKPANPDVLV 260
++N G TGN IGF N ++ +
Sbjct 636 DFNQGFANTGNNNIGFANTGNNNIGI 661
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/77 (56%), Positives = 50/77 (65%), Gaps = 6/77 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG------NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
A + NLGS N+G NIG N+G NIGFGN G+ NIGIGN G N+G GNTG
Sbjct 3058 ANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTG 3117
Query 235 NWNIGIGITGNGQIGFG 251
N NIGIG+TG+ GFG
Sbjct 3118 NGNIGIGLTGDTMTGFG 3134
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/70 (55%), Positives = 50/70 (72%), Gaps = 0/70 (0%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGI 240
L + N+GSGN+G+ NIG N+G+ N+GFGN GD N G N G+ N+G NTGN NIGI
Sbjct 602 GSLGNYNIGSGNLGIYNIGFGNVGDYNVGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 661
Query 241 GITGNGQIGF 250
G++G+ Q GF
Sbjct 662 GLSGDNQQGF 671
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/74 (56%), Positives = 49/74 (67%), Gaps = 5/74 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG N NIGFGN GD N G N G+ N+G NTGN
Sbjct 1052 NVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNN 1111
Query 237 NIGIGITGNGQIGF 250
NIGIG++G+ Q GF
Sbjct 1112 NIGIGLSGDNQQGF 1125
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/75 (59%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGNLGS GN G NIG N+GN NIG GN G N G GN GD NLG NTGN
Sbjct 1501 NLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNN 1560
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1561 NIGFANTGNNNIGIG 1575
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%)
Query 182 QLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
+ SGN GS N+G N+GN NIG + N GFGN GD N+G N G N+G NTGN
Sbjct 1980 NVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNN 2039
Query 237 NIGIGITGNGQIGFGK 252
NIGIG++G+ Q GFG
Sbjct 2040 NIGIGLSGHNQQGFGS 2055
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/75 (58%), Positives = 46/75 (62%), Gaps = 5/75 (6%)
Query 182 QLASGNLGS-----GNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNW 236
L SGN+GS GN G NIG N+GN NIGF N G+ NIG GN GD N G NTGN
Sbjct 1042 NLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNN 1101
Query 237 NIGIGITGNGQIGFG 251
NIG TGN IG G
Sbjct 1102 NIGFANTGNNNIGIG 1116
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (47%), Positives = 51/81 (63%), Gaps = 0/81 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
LA + S NLGSGN+G N+ N G+ NIG N G+ NIG+GN+G N G GN G++N+G
Sbjct 1494 LANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLG 1553
Query 240 IGITGNGQIGFGKPANPDVLV 260
TGN IGF N ++ +
Sbjct 1554 FANTGNNNIGFANTGNNNIGI 1574
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/66 (57%), Positives = 47/66 (72%), Gaps = 0/66 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
NLG GNVG GN+G+ NIG++N+G GN G+AN+G GNIG N+ GN G++NIG GN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNY 1999
Query 247 QIGFGK 252
IG G
Sbjct 2000 NIGLGN 2005
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (43%), Positives = 52/83 (63%), Gaps = 5/83 (6%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIGNANIGF-----GNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN+G NVG+GN+GN N+G+ NIG GNRG NIG N+G+ N+G+GN G+
Sbjct 1949 GNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGS 2008
Query 236 WNIGIGITGNGQIGFGKPANPDV 258
+N G G G+ +GF + ++
Sbjct 2009 YNFGFGNAGDFNLGFANSGSNNI 2031
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/73 (55%), Positives = 45/73 (62%), Gaps = 2/73 (2%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIG 241
A GN+G GN G GNIG N G NIGFGN G+ NIGIG GD G G N+G NIG+
Sbjct 3087 AIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLF 3146
Query 242 ITGNGQIGFGKPA 254
+G G IGFG
Sbjct 3147 NSGTGNIGFGNSG 3159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (63%), Gaps = 5/78 (6%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIG-----NANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ L GN+GSGNVG GNIG+ N+G NAN+G GN G N+ GN G N+G N G
Sbjct 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query 235 NWNIGIGITGNGQIGFGK 252
N+NIG+G G+ GFG
Sbjct 1998 NYNIGLGNLGSYNFGFGN 2015
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/158 (36%), Positives = 69/158 (44%), Gaps = 38/158 (24%)
Query 141 EQIWAQ---DVAAMFGYHSAASAVATQLAPIQEGLQQQLQN----VLAQLASGNLGSGNV 193
+ WA ++ ++ A A + L I L LQN + NLG N+
Sbjct 2966 QSGWANLGNSISGIYNTGLGAPANVSGLLNIGTNLAGWLQNGPTETTFSVGLANLGFWNL 3025
Query 194 GVGNIGNDNIGNANIGFGNRGDANI-----GIGNIGDRNL-------------------- 228
G NIGN N+G+ANIG N G ANI G NIGD NL
Sbjct 3026 GSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLT 3085
Query 229 ------GIGNTGNWNIGIGITGNGQIGFGKPANPDVLV 260
G GNTGN NIGIG TG G IGFG N ++ +
Sbjct 3086 AAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGI 3123
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/112 (42%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG----------------------NIG 224
N+G GN G NIG N GN NIGFGN G+ NIGIG N+G
Sbjct 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query 225 DRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDVLV--VGNGGPGVTALVMG 274
D N G+ N GN+N GI TGN IG N +V + G+G G ++L G
Sbjct 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/116 (37%), Positives = 62/116 (54%), Gaps = 11/116 (9%)
Query 156 SAASAVATQLAPIQEGLQQQLQNV-LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRG 214
S + + T L+ + G + N LA L N+GS N+G N+G+ N+G+ N+ GN+G
Sbjct 1000 SGLNNIGTNLSGVFRGPTGTIFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQG 1059
Query 215 DANIGIGNIGDRNLGIGNTGNWNIGIG----------ITGNGQIGFGKPANPDVLV 260
NIG N+G+ N+G N GN+NIG G TGN IGF N ++ +
Sbjct 1060 SYNIGPANLGNYNIGFANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGI 1115
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/83 (46%), Positives = 45/83 (55%), Gaps = 12/83 (14%)
Query 180 LAQLASGNLGSGNVGVGNIG----ND--------NIGNANIGFGNRGDANIGIGNIGDRN 227
+ +GN+G GN G GNIG D N G NIG N G NIG GN G N
Sbjct 3103 IGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGN 3162
Query 228 LGIGNTGNWNIGIGITGNGQIGF 250
GIGN+G++N GIG TG+ GF
Sbjct 3163 WGIGNSGDYNTGIGNTGSTNSGF 3185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GNIG N G NIGFGN G N GIGN GD N GIGNTG+ N G TG
Sbjct 3137 NSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTG 3189
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/118 (33%), Positives = 62/118 (53%), Gaps = 6/118 (5%)
Query 147 DVAAMFGYHSAASAV----ATQLAPIQEGLQQ--QLQNVLAQLASGNLGSGNVGVGNIGN 200
+V+ MF S + AT ++ GL Q + + N G N+G N+G+
Sbjct 1445 NVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGS 1504
Query 201 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N+G+ N+ GN+G NIG N+G+ N+G+GN G++N G G G+ +GF N ++
Sbjct 1505 GNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNI 1562
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/79 (45%), Positives = 46/79 (59%), Gaps = 7/79 (8%)
Query 187 NLGSGNVGVGNIGNDNIG-----NANIGFG--NRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GNVG+GN+G G ++ +G G N G NIG+ N G N+GIGN+G N+G
Sbjct 2629 NSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVG 2688
Query 240 IGITGNGQIGFGKPANPDV 258
IG TG G G G N +
Sbjct 2689 IGNTGTGNTGIGNSGNYNT 2707
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 40/77 (52%), Gaps = 17/77 (22%)
Query 181 AQLASGNLGSGNVGVG-----------------NIGNDNIGNANIGFGNRGDANIGIGNI 223
+ GN+G+G GVG NIG N G N+G GN G N+GIGN
Sbjct 2633 GNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNT 2692
Query 224 GDRNLGIGNTGNWNIGI 240
G N GIGN+GN+N G+
Sbjct 2693 GTGNTGIGNSGNYNTGL 2709
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/75 (47%), Positives = 40/75 (54%), Gaps = 0/75 (0%)
Query 184 ASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGIT 243
+GN+G N G GNIG N G N G GN GD N GIGN G N G NTG N GIG +
Sbjct 3139 GTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNS 3198
Query 244 GNGQIGFGKPANPDV 258
G+ G N +
Sbjct 3199 GDYNTGLFNAGNTNT 3213
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/84 (43%), Positives = 43/84 (52%), Gaps = 20/84 (23%)
Query 187 NLGSGNVGVGNIGNDNI--------------------GNANIGFGNRGDANIGIGNIGDR 226
N G+ N+G N GN+NI G ANIG N G N+GIGN G
Sbjct 1097 NTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTG 1156
Query 227 NLGIGNTGNWNIGIGITGNGQIGF 250
N GIGN+G+ N GIG TG+ GF
Sbjct 1157 NWGIGNSGSGNTGIGNTGSTNTGF 1180
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/65 (51%), Positives = 36/65 (56%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L L S N G GN G N+G N GN NIGF N G+ NIGIG GD G G WN G
Sbjct 1534 LGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1593
Query 240 IGITG 244
G +G
Sbjct 1594 SGNSG 1598
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/104 (38%), Positives = 48/104 (47%), Gaps = 25/104 (24%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
A L + N+G GN G N G N GN NIGF N G+ NIGIG
Sbjct 1075 FANLGNYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSG 1134
Query 222 -------NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPANPDV 258
N G N+GIGN+G N GIG +G+G G G + +
Sbjct 1135 TANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNT 1178
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 46/97 (48%), Gaps = 22/97 (22%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIG------------------ 221
L L S N G GN G N+G N G+ NIGF N G+ NIGIG
Sbjct 2003 LGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTAN 2062
Query 222 ----NIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPA 254
N G N+G+ N+G NIGIG +G G G G P
Sbjct 2063 TGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPG 2099
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/59 (48%), Positives = 42/59 (72%), Gaps = 3/59 (5%)
Query 197 NIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFGKPAN 255
N+G N+G+ N+G GN GD+N+G+GN+G+ N+G GN G++N+ G G+ IG PAN
Sbjct 1940 NLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIG---PAN 1995
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 46/82 (57%), Gaps = 3/82 (3%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIG--NTGNWNIGIGITGNGQIG 249
N G GN G N G N+G GN G G+G GD +GIG N+G++NIG+ +G G +G
Sbjct 2619 NSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVG 2678
Query 250 FGKPANPDVLVVGNGGPGVTAL 271
G +V +GN G G T +
Sbjct 2679 IGNSGTGNV-GIGNTGTGNTGI 2699
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG+ SG N G NIG N G NIG GN G N GI N GD N
Sbjct 1577 SGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTN 1636
Query 228 LGIGNTGNWNIGI 240
GI NTG+ N G+
Sbjct 1637 TGIFNTGDVNTGL 1649
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/61 (48%), Positives = 35/61 (58%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L +GN+G GN G GN+G N G N G GN G+ N G+ N G N GI N GN N G
Sbjct 2669 LFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTG 2728
Query 240 I 240
+
Sbjct 2729 L 2729
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/76 (54%), Positives = 48/76 (64%), Gaps = 4/76 (5%)
Query 187 NLGSGNVGVGNI-GNDNIGNANI-GFGNRGDANI-GIGNIGDRN-LGIGNTGNWNIGIGI 242
NLG N GV NI GN NIGN NI G GN GD NI G GN+G +N LG GN G++NIG G
Sbjct 534 NLGLANRGVVNILGNANIGNYNILGSGNVGDFNILGSGNLGSQNILGSGNVGSFNIGSGN 593
Query 243 TGNGQIGFGKPANPDV 258
G +G G N ++
Sbjct 594 IGVFNVGSGSLGNYNI 609
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/65 (48%), Positives = 37/65 (57%), Gaps = 6/65 (9%)
Query 181 AQLASGNLGSGNVGVGNIGND------NIGNANIGFGNRGDANIGIGNIGDRNLGIGNTG 234
+ GN G+GN G+GN GN N G+AN GF N G AN G+GN G+ N G N G
Sbjct 313 GNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNAGNYNTGSYNPG 372
Query 235 NWNIG 239
N N G
Sbjct 373 NSNTG 377
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/53 (55%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G NIG N G N+G GN G N GIGN G N GIGNTG+ N G TG
Sbjct 1132 NSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTG 1184
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/73 (47%), Positives = 38/73 (53%), Gaps = 0/73 (0%)
Query 188 LGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
GS N G N G N G NIG N G NIGIGN G N GIGN G N G+G +G G
Sbjct 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query 248 IGFGKPANPDVLV 260
G P ++ V
Sbjct 2113 WGLWNPGTGNMGV 2125
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGFG 251
N G GN G N G AN G N G N G+ N G N+GIGN G G+G++G+ Q+G G
Sbjct 2599 NSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIG 2658
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/70 (46%), Positives = 38/70 (55%), Gaps = 15/70 (21%)
Query 186 GNLGSGNVGVGNIGNDNIG------------NA---NIGFGNRGDANIGIGNIGDRNLGI 230
GN GSGN G+GN G+ N G NA N G+ N GD N GI N+GD N G
Sbjct 1161 GNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTGIANLGDFNTGF 1220
Query 231 GNTGNWNIGI 240
NTGN++ G
Sbjct 1221 YNTGNFSTGF 1230
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 36/64 (57%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGN-----DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN G+ N G+ N GF N G N GIGN GD N G+ N GN
Sbjct 3151 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3210
Query 236 WNIG 239
N G
Sbjct 3211 TNTG 3214
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/65 (50%), Positives = 35/65 (54%), Gaps = 0/65 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
L + N+G N G GNIG N G N G N GD N GI N GD N G+ N GN N G
Sbjct 1599 LFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTG 1658
Query 240 IGITG 244
I TG
Sbjct 1659 IFNTG 1663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN G GN G GN G N G+ N GF N G N G+ N G N G NTG+ N G
Sbjct 1150 IGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTNTG 1209
Query 240 IGITGNGQIGFGKPAN 255
I G+ GF N
Sbjct 1210 IANLGDFNTGFYNTGN 1225
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/61 (46%), Positives = 34/61 (56%), Gaps = 0/61 (0%)
Query 180 LAQLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
+ +GN+G GN G GN G N GN N G N G N GI N G+ N G+ N G +N G
Sbjct 2679 IGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTG 2738
Query 240 I 240
I
Sbjct 2739 I 2739
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/53 (51%), Positives = 34/53 (65%), Gaps = 0/53 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIG 239
N G+GN+GV N+G N G N+G N G AN+GI N G N G NTG++N G
Sbjct 2117 NPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDG 2169
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 0/63 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNG 246
N+G N G GN+G N G N+G GN G N GIGN G+ N G+ N G N GI GN
Sbjct 2666 NIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNH 2725
Query 247 QIG 249
G
Sbjct 2726 NTG 2728
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/53 (57%), Positives = 31/53 (59%), Gaps = 0/53 (0%)
Query 192 NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G GN G N G NIG N G NIGIGN G N GI NTG+ N GI TG
Sbjct 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1643
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 38/73 (53%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASGNLGSG--NVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N+ + SG SG N G N+G N G N+G N G N GIGN G N
Sbjct 664 SGDNQQGFNIASGWNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDN 723
Query 228 LGIGNTGNWNIGI 240
GI N G++N GI
Sbjct 724 TGILNAGSYNTGI 736
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/73 (44%), Positives = 35/73 (48%), Gaps = 2/73 (2%)
Query 170 EGLQQQLQNVLAQLASG--NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRN 227
G QQ N SG N+G N G N+G N G N G GN G N GIGN G N
Sbjct 1118 SGDNQQGFNFAGGWNSGTANIGLFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTN 1177
Query 228 LGIGNTGNWNIGI 240
G NTG N G+
Sbjct 1178 TGFFNTGIVNTGV 1190
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 35/64 (55%), Gaps = 0/64 (0%)
Query 182 QLASGNLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIG 241
+ S N G NVG+ N G+ N G+ N G N GD N G N GD N G NTG+ N G
Sbjct 2137 NVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Query 242 ITGN 245
I GN
Sbjct 2197 IGGN 2200
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 187 NLGSGNVGVGNIGNDNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITG 244
N G+ N+G+ N G NIG N G GN G N G+GN G N G GN G WN G G G
Sbjct 2067 NSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMG 2124
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/64 (47%), Positives = 37/64 (58%), Gaps = 5/64 (7%)
Query 181 AQLASGNLGSGNVGVGNIGNDNIG--NA---NIGFGNRGDANIGIGNIGDRNLGIGNTGN 235
+ GN G+GN G+GN GN N G NA N G N G+ N G+ NIG N GI N G+
Sbjct 2685 GNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGH 2744
Query 236 WNIG 239
+N G
Sbjct 2745 YNTG 2748
>gi|289445893|ref|ZP_06435637.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418851|gb|EFD16052.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=3507
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/282 (57%), Positives = 189/282 (68%), Gaps = 35/282 (12%)
Query 1 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTTGLAGDAWHGP 60
M+FAVLPPE+NSAR++ GAGL PML AA+AWDGLA+EL +AA SF++VT GLAG +W G
Sbjct 1 MSFAVLPPEINSARLYVGAGLAPMLDAAAAWDGLADELGSAAASFSAVTAGLAGSSWLGA 60
Query 61 ASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEATLAATVSPAMVAANRTRLASL 120
AS AMT AA+PY+GWL+ AA QA QAA Q RLAA+AFEA LAATV PA+++ANR SL
Sbjct 61 ASTAMTGAAAPYLGWLSAAAAQAQQAATQTRLAAAAFEAALAATVHPAIISANRALFVSL 120
Query 121 VAANLLGQNAPAIAAAEAEYEQIWAQDVAAMFGYHSAASAVATQLAPIQEGL-------- 172
V +NLLGQNAPAIAA EA YEQ+WAQDVAAMFGYH+ ASA + L P + L
Sbjct 121 VVSNLLGQNAPAIAATEAAYEQMWAQDVAAMFGYHAGASAAVSALTPFGQALPTVAGGGA 180
Query 173 ------QQQLQNVLAQLA---------------SGNLGSGNVGVGNIGNDNIGNANIGFG 211
Q V L + NLGS N+G GNIG+ NIG++NIGFG
Sbjct 181 LVSAAAAQVTTRVFRNLGLANVGEGNVGNGNVGNFNLGSANIGNGNIGSGNIGSSNIGFG 240
Query 212 NRGDA------NIGIGNIGDRNLGIGNTGNWNIGIGITGNGQ 247
N G NIG GN G N+G GNTG+ NIG G TG+G
Sbjct 241 NVGPGLTAALNNIGFGNTGSNNIGFGNTGSNNIGFGNTGDGN 282
Lambda K H
0.317 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1310036550930
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40