BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2632c
Length=93
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609769|ref|NP_217148.1| hypothetical protein Rv2632c [Mycob... 189 1e-46
gi|340627653|ref|YP_004746105.1| hypothetical protein MCAN_26781... 188 2e-46
gi|90109355|pdb|2FGG|A Chain A, Crystal Structure Of Rv2632c 184 4e-45
gi|254232745|ref|ZP_04926072.1| conserved hypothetical protein [... 158 3e-37
gi|183982082|ref|YP_001850373.1| hypothetical protein MMAR_2068 ... 148 3e-34
gi|240170615|ref|ZP_04749274.1| hypothetical protein MkanA1_1497... 147 7e-34
gi|296170916|ref|ZP_06852453.1| conserved hypothetical protein [... 145 3e-33
gi|118618617|ref|YP_906949.1| hypothetical protein MUL_3277 [Myc... 144 4e-33
gi|148661537|ref|YP_001283060.1| hypothetical protein MRA_1749 [... 100 7e-20
gi|15841202|ref|NP_336239.1| hypothetical protein MT1780 [Mycoba... 100 7e-20
gi|15608876|ref|NP_216254.1| hypothetical protein Rv1738 [Mycoba... 100 8e-20
gi|148822945|ref|YP_001287699.1| hypothetical protein TBFG_11756... 100 8e-20
gi|289745822|ref|ZP_06505200.1| conserved hypothetical protein [... 100 8e-20
gi|120402425|ref|YP_952254.1| hypothetical protein Mvan_1414 [My... 94.7 4e-18
gi|111017060|ref|YP_700032.1| hypothetical protein RHA1_ro00038 ... 83.6 8e-15
gi|325676818|ref|ZP_08156491.1| hypothetical protein HMPREF0724_... 83.6 8e-15
gi|312139731|ref|YP_004007067.1| hypothetical protein REQ_23370 ... 83.6 1e-14
gi|289569795|ref|ZP_06450022.1| LOW QUALITY PROTEIN: conserved h... 80.1 9e-14
gi|289443201|ref|ZP_06432945.1| conserved hypothetical protein [... 80.1 9e-14
gi|289750297|ref|ZP_06509675.1| LOW QUALITY PROTEIN: conserved h... 80.1 1e-13
gi|119714550|ref|YP_921515.1| hypothetical protein Noca_0283 [No... 78.6 3e-13
gi|226366469|ref|YP_002784252.1| hypothetical protein ROP_70600 ... 74.7 4e-12
gi|229818977|ref|YP_002880503.1| hypothetical protein Bcav_0478 ... 73.9 8e-12
gi|226306893|ref|YP_002766853.1| hypothetical protein RER_34060 ... 73.2 1e-11
gi|226359603|ref|YP_002777381.1| hypothetical protein ROP_01890 ... 68.9 2e-10
gi|271966199|ref|YP_003340395.1| hypothetical protein Sros_4833 ... 67.4 6e-10
gi|336178356|ref|YP_004583731.1| hypothetical protein FsymDg_243... 63.2 1e-08
gi|269127102|ref|YP_003300472.1| hypothetical protein Tcur_2889 ... 59.7 1e-07
gi|226359502|ref|YP_002777279.1| hypothetical protein ROP_00870 ... 58.5 3e-07
gi|333918867|ref|YP_004492448.1| hypothetical protein AS9A_1196 ... 58.5 3e-07
gi|291006772|ref|ZP_06564745.1| hypothetical protein SeryN2_1980... 58.2 5e-07
gi|134098988|ref|YP_001104649.1| hypothetical protein SACE_2426 ... 57.8 5e-07
gi|291302646|ref|YP_003513924.1| hypothetical protein Snas_5196 ... 57.0 8e-07
gi|9653922|gb|AAF93174.1| unknown [Mycobacterium bovis BCG] 57.0 9e-07
gi|332670397|ref|YP_004453405.1| hypothetical protein Celf_1888 ... 57.0 1e-06
gi|345011497|ref|YP_004813851.1| hypothetical protein Strvi_3910... 56.2 2e-06
gi|311895311|dbj|BAJ27719.1| hypothetical protein KSE_18950 [Kit... 55.5 2e-06
gi|72162361|ref|YP_290018.1| hypothetical protein Tfu_1962 [Ther... 55.1 4e-06
gi|86740264|ref|YP_480664.1| hypothetical protein Francci3_1559 ... 54.7 5e-06
gi|331698631|ref|YP_004334870.1| hypothetical protein Psed_4873 ... 53.5 9e-06
gi|297560903|ref|YP_003679877.1| hypothetical protein Ndas_1944 ... 53.1 1e-05
gi|328880396|emb|CCA53635.1| hypothetical protein SVEN_0348 [Str... 53.1 1e-05
gi|302539906|ref|ZP_07292248.1| conserved hypothetical protein [... 52.0 3e-05
gi|291441659|ref|ZP_06581049.1| predicted protein [Streptomyces ... 52.0 3e-05
gi|337764661|emb|CCB73370.1| conserved protein of unknown functi... 52.0 3e-05
gi|312197432|ref|YP_004017493.1| hypothetical protein FraEuI1c_3... 51.2 4e-05
gi|254381632|ref|ZP_04996996.1| hypothetical protein SSAG_01298 ... 50.4 8e-05
gi|297154474|gb|ADI04186.1| hypothetical protein SBI_01065 [Stre... 49.3 2e-04
gi|302557031|ref|ZP_07309373.1| conserved hypothetical protein [... 49.3 2e-04
gi|306811887|gb|ADN05984.1| conserved hypothetical protein DUF18... 49.3 2e-04
>gi|15609769|ref|NP_217148.1| hypothetical protein Rv2632c [Mycobacterium tuberculosis H37Rv]
gi|15842172|ref|NP_337209.1| hypothetical protein MT2708 [Mycobacterium tuberculosis CDC1551]
gi|31793818|ref|NP_856311.1| hypothetical protein Mb2665c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=93
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA
Sbjct 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
IARALSDLANQLFALTSSDIEASTHQPVTGLHH
Sbjct 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
>gi|340627653|ref|YP_004746105.1| hypothetical protein MCAN_26781 [Mycobacterium canettii CIPT
140010059]
gi|340005843|emb|CCC45009.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=93
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/93 (99%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MTD+EHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA
Sbjct 1 MTDNEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
IARALSDLANQLFALTSSDIEASTHQPVTGLHH
Sbjct 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
>gi|90109355|pdb|2FGG|A Chain A, Crystal Structure Of Rv2632c
Length=101
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/92 (99%), Positives = 91/92 (99%), Gaps = 0/92 (0%)
Query 2 TDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAI 61
TDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQ VGVGLARLDPADEPVAQIGDELAI
Sbjct 2 TDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQXVGVGLARLDPADEPVAQIGDELAI 61
Query 62 ARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
ARALSDLANQLFALTSSDIEASTHQPVTGLHH
Sbjct 62 ARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
>gi|254232745|ref|ZP_04926072.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124601804|gb|EAY60814.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|323718784|gb|EGB27942.1| hypothetical protein TMMG_02644 [Mycobacterium tuberculosis CDC1551A]
Length=79
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
Query 15 VLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFA 74
+LIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFA
Sbjct 1 MLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFA 60
Query 75 LTSSDIEASTHQPVTGLHH 93
LTSSDIEASTHQPVTGLHH
Sbjct 61 LTSSDIEASTHQPVTGLHH 79
>gi|183982082|ref|YP_001850373.1| hypothetical protein MMAR_2068 [Mycobacterium marinum M]
gi|183175408|gb|ACC40518.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=93
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/93 (77%), Positives = 81/93 (88%), Gaps = 0/93 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MT + K+C +DVLIEE DERTRAKARL W + +VG+GLARLDPADEPVAQIGDELA
Sbjct 1 MTGNTTNAKSCHVDVLIEERDERTRAKARLVWGDQTLVGIGLARLDPADEPVAQIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
IARALSDLANQLFA TS+DI+ASTH+PV+GLHH
Sbjct 61 IARALSDLANQLFAATSADIQASTHEPVSGLHH 93
>gi|240170615|ref|ZP_04749274.1| hypothetical protein MkanA1_14975 [Mycobacterium kansasii ATCC
12478]
Length=96
Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/85 (83%), Positives = 78/85 (92%), Gaps = 0/85 (0%)
Query 9 KTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDL 68
K+C +DVLIEE DERTRAKARL W +VGVGLARLDPADEPVA+IGDELAIARAL+DL
Sbjct 12 KSCHVDVLIEERDERTRAKARLVWGDHTLVGVGLARLDPADEPVAEIGDELAIARALTDL 71
Query 69 ANQLFALTSSDIEASTHQPVTGLHH 93
ANQLFA+TS+DI+ASTHQPVTGLHH
Sbjct 72 ANQLFAVTSADIQASTHQPVTGLHH 96
>gi|296170916|ref|ZP_06852453.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894465|gb|EFG74209.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=93
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 80/92 (87%), Gaps = 0/92 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MT S+ K+C IDVL+EE +E+TRAKARLSWAG +VGVG+ARLDPAD PVA IGDELA
Sbjct 1 MTKSDQGTKSCHIDVLVEEREEKTRAKARLSWAGSTLVGVGVARLDPADPPVAAIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGLH 92
+ARAL DLANQLFA TS+DI+ASTH+PVTGLH
Sbjct 61 VARALYDLANQLFAATSTDIQASTHEPVTGLH 92
>gi|118618617|ref|YP_906949.1| hypothetical protein MUL_3277 [Mycobacterium ulcerans Agy99]
gi|118570727|gb|ABL05478.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=93
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/93 (76%), Positives = 80/93 (87%), Gaps = 0/93 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MT + K+C +DVLIEE DERTRAKARL W + +VG+GLARLD ADEPVAQIGDELA
Sbjct 1 MTGNTTNAKSCHVDVLIEERDERTRAKARLVWGDQTLVGIGLARLDRADEPVAQIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGLHH 93
IARALSDLANQLFA TS+DI+ASTH+PV+GLHH
Sbjct 61 IARALSDLANQLFAATSADIQASTHEPVSGLHH 93
>gi|148661537|ref|YP_001283060.1| hypothetical protein MRA_1749 [Mycobacterium tuberculosis H37Ra]
gi|167968648|ref|ZP_02550925.1| hypothetical protein MtubH3_11653 [Mycobacterium tuberculosis
H37Ra]
gi|254231931|ref|ZP_04925258.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=110
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 22 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 81
Query 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
ALSDL ++ +++ DIEA THQP L+
Sbjct 82 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 110
>gi|15841202|ref|NP_336239.1| hypothetical protein MT1780 [Mycobacterium tuberculosis CDC1551]
gi|253799220|ref|YP_003032221.1| hypothetical protein TBMG_02257 [Mycobacterium tuberculosis KZN
1435]
gi|289554488|ref|ZP_06443698.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
6 more sequence titles
Length=153
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 65 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 124
Query 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
ALSDL ++ +++ DIEA THQP L+
Sbjct 125 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 153
>gi|15608876|ref|NP_216254.1| hypothetical protein Rv1738 [Mycobacterium tuberculosis H37Rv]
gi|31792926|ref|NP_855419.1| hypothetical protein Mb1767 [Mycobacterium bovis AF2122/97]
gi|121637646|ref|YP_977869.1| hypothetical protein BCG_1777 [Mycobacterium bovis BCG str. Pasteur
1173P2]
36 more sequence titles
Length=94
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
Query 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
ALSDL ++ +++ DIEA THQP L+
Sbjct 66 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 94
>gi|148822945|ref|YP_001287699.1| hypothetical protein TBFG_11756 [Mycobacterium tuberculosis F11]
gi|148721472|gb|ABR06097.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=153
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 65 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 124
Query 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
ALSDL ++ +++ DIEA THQP L+
Sbjct 125 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 153
>gi|289745822|ref|ZP_06505200.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289686350|gb|EFD53838.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=121
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 67/89 (76%), Gaps = 0/89 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 33 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 92
Query 64 ALSDLANQLFALTSSDIEASTHQPVTGLH 92
ALSDL ++ +++ DIEA THQP L+
Sbjct 93 ALSDLGKRMLKVSTHDIEAVTHQPARLLY 121
>gi|120402425|ref|YP_952254.1| hypothetical protein Mvan_1414 [Mycobacterium vanbaalenii PYR-1]
gi|119955243|gb|ABM12248.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=92
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/91 (55%), Positives = 62/91 (69%), Gaps = 0/91 (0%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELA 60
MTDS K + V ++EH+++TRA A L W R + GVGLAR +P DE V IGDELA
Sbjct 1 MTDSPRKPKEWTVGVAVDEHEDQTRATAWLVWDERDVTGVGLARRNPKDEDVPVIGDELA 60
Query 61 IARALSDLANQLFALTSSDIEASTHQPVTGL 91
+ARALSDLA QL A+T+ DIE TH+ V L
Sbjct 61 VARALSDLARQLLAVTARDIEGVTHEHVASL 91
>gi|111017060|ref|YP_700032.1| hypothetical protein RHA1_ro00038 [Rhodococcus jostii RHA1]
gi|110816590|gb|ABG91874.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=93
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/86 (54%), Positives = 63/86 (74%), Gaps = 6/86 (6%)
Query 9 KTCQIDVLIEEHD-----ERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIA 62
KT ++++I+EHD RTRA+ARL + +VGVGLAR +PAD + +IGDELA A
Sbjct 4 KTWSVEIVIDEHDADEGGSRTRAQARLRTRDTHTLVGVGLARRNPADTEIPEIGDELATA 63
Query 63 RALSDLANQLFALTSSDIEASTHQPV 88
RAL+DLA+QL LT++D+EA+TH V
Sbjct 64 RALADLAHQLIELTAADVEAATHSRV 89
>gi|325676818|ref|ZP_08156491.1| hypothetical protein HMPREF0724_14274 [Rhodococcus equi ATCC
33707]
gi|325552366|gb|EGD22055.1| hypothetical protein HMPREF0724_14274 [Rhodococcus equi ATCC
33707]
Length=87
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/78 (57%), Positives = 53/78 (68%), Gaps = 0/78 (0%)
Query 8 GKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSD 67
GK +D+ I+EHD +TR+ ARL +VGVGLAR +P D V IGDELA ARAL+D
Sbjct 3 GKNWSVDISIDEHDTQTRSTARLHTVESTIVGVGLARRNPVDRNVPSIGDELATARALAD 62
Query 68 LANQLFALTSSDIEASTH 85
LA+QL T DIEA TH
Sbjct 63 LAHQLIDSTVGDIEAVTH 80
>gi|312139731|ref|YP_004007067.1| hypothetical protein REQ_23370 [Rhodococcus equi 103S]
gi|311889070|emb|CBH48383.1| hypothetical protein REQ_23370 [Rhodococcus equi 103S]
Length=87
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/78 (57%), Positives = 53/78 (68%), Gaps = 0/78 (0%)
Query 8 GKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSD 67
GK +D+ I+EHD +TR+ ARL +VGVGLAR +P D V IGDELA ARAL+D
Sbjct 3 GKNWSVDISIDEHDAQTRSTARLHTVESTIVGVGLARRNPVDRNVPSIGDELATARALAD 62
Query 68 LANQLFALTSSDIEASTH 85
LA+QL T DIEA TH
Sbjct 63 LAHQLIDSTVGDIEAVTH 80
>gi|289569795|ref|ZP_06450022.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
gi|289543549|gb|EFD47197.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
Length=72
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/67 (59%), Positives = 52/67 (78%), Gaps = 0/67 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
Query 64 ALSDLAN 70
ALSDL
Sbjct 66 ALSDLGK 72
>gi|289443201|ref|ZP_06432945.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416120|gb|EFD13360.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=116
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/67 (59%), Positives = 52/67 (78%), Gaps = 0/67 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 22 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 81
Query 64 ALSDLAN 70
ALSDL
Sbjct 82 ALSDLGK 88
>gi|289750297|ref|ZP_06509675.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
gi|289690884|gb|EFD58313.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
Length=95
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (59%), Positives = 52/67 (78%), Gaps = 0/67 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +IGDEL++AR
Sbjct 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVAR 65
Query 64 ALSDLAN 70
ALSDL
Sbjct 66 ALSDLGK 72
>gi|119714550|ref|YP_921515.1| hypothetical protein Noca_0283 [Nocardioides sp. JS614]
gi|119535211|gb|ABL79828.1| hypothetical protein Noca_0283 [Nocardioides sp. JS614]
Length=109
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/82 (52%), Positives = 58/82 (71%), Gaps = 2/82 (2%)
Query 9 KTCQIDVLIEEHDERTRAKARLSW--AGRQMVGVGLARLDPADEPVAQIGDELAIARALS 66
KT +++ I EHD +TRA+ARL+ + ++ G G+ARL+PAD V +IGDELA ARAL+
Sbjct 24 KTWSVEIFIGEHDGQTRAEARLATEPSATRLTGWGIARLNPADPEVPEIGDELATARALA 83
Query 67 DLANQLFALTSSDIEASTHQPV 88
DLA+QL + DI A T +PV
Sbjct 84 DLAHQLLETAAVDIGAVTSKPV 105
>gi|226366469|ref|YP_002784252.1| hypothetical protein ROP_70600 [Rhodococcus opacus B4]
gi|226244959|dbj|BAH55307.1| hypothetical protein [Rhodococcus opacus B4]
Length=93
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/85 (51%), Positives = 59/85 (70%), Gaps = 6/85 (7%)
Query 10 TCQIDVLIEEHDE-----RTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
T ++V+I+EHD RTRA+ARL + R VG GLAR +P D + +IG+ELA AR
Sbjct 5 TWLVEVVIDEHDSDEGGSRTRAQARLRTRDTRTFVGSGLARRNPDDTEIPEIGEELATAR 64
Query 64 ALSDLANQLFALTSSDIEASTHQPV 88
ALSDLA+QL T++D+E++TH V
Sbjct 65 ALSDLAHQLIEATAADVESATHSRV 89
>gi|229818977|ref|YP_002880503.1| hypothetical protein Bcav_0478 [Beutenbergia cavernae DSM 12333]
gi|229564890|gb|ACQ78741.1| Domain of unknown function DUF1876 [Beutenbergia cavernae DSM
12333]
Length=89
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/80 (52%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query 9 KTCQIDVLIEEHDERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSD 67
K I V I+EHD+ TRA+ARL + AGR++ G+G A+ +P D V +IGDELA+ARAL +
Sbjct 5 KHWSIAVEIDEHDDTTRAQARLETAAGREVRGLGHAQRNPLDASVPEIGDELAVARALRN 64
Query 68 LANQLFALTSSDIEASTHQP 87
LA+ L T DIE +T +P
Sbjct 65 LADHLLHTTEKDIEGATGEP 84
>gi|226306893|ref|YP_002766853.1| hypothetical protein RER_34060 [Rhodococcus erythropolis PR4]
gi|226186010|dbj|BAH34114.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=92
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (66%), Gaps = 5/84 (5%)
Query 9 KTCQIDVLIEEHD----ERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
K +D+ I+EH RTRA ARL S +VG G AR +P+D V +IGDELA+AR
Sbjct 4 KHWTVDITIDEHTAEEGNRTRAIARLRSRDDTHIVGSGFARCNPSDHDVPEIGDELAVAR 63
Query 64 ALSDLANQLFALTSSDIEASTHQP 87
ALS LA QL T++D+E+ TH+P
Sbjct 64 ALSHLARQLIEATAADLESVTHEP 87
>gi|226359603|ref|YP_002777381.1| hypothetical protein ROP_01890 [Rhodococcus opacus B4]
gi|226238088|dbj|BAH48436.1| hypothetical protein [Rhodococcus opacus B4]
Length=114
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/85 (48%), Positives = 57/85 (68%), Gaps = 6/85 (7%)
Query 10 TCQIDVLIEEHDE-----RTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
T ++V+++EHD R RA+ARL + R VG GLAR +P D +++IG+ LA AR
Sbjct 26 TWLVEVVVDEHDSDEGGSRIRAQARLRTRDTRTFVGSGLARRNPDDAEISEIGEVLATAR 85
Query 64 ALSDLANQLFALTSSDIEASTHQPV 88
ALSDLA+QL T++D+E +TH V
Sbjct 86 ALSDLAHQLIEATAADVETATHSRV 110
>gi|271966199|ref|YP_003340395.1| hypothetical protein Sros_4833 [Streptosporangium roseum DSM
43021]
gi|270509374|gb|ACZ87652.1| hypothetical protein Sros_4833 [Streptosporangium roseum DSM
43021]
Length=85
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/73 (51%), Positives = 49/73 (68%), Gaps = 1/73 (1%)
Query 9 KTCQIDVLIEEHDERTRAKARLSWAGR-QMVGVGLARLDPADEPVAQIGDELAIARALSD 67
K + V I E + T A+A LS + ++ GVG AR +PAD+P +IGDELA+ARALSD
Sbjct 4 KQWTVQVYITEEGDDTSARAVLSTRDKTRITGVGHARRNPADQPAPEIGDELAVARALSD 63
Query 68 LANQLFALTSSDI 80
L N+L +TS DI
Sbjct 64 LGNRLLTVTSEDI 76
>gi|336178356|ref|YP_004583731.1| hypothetical protein FsymDg_2432 [Frankia symbiont of Datisca
glomerata]
gi|334859336|gb|AEH09810.1| Domain of unknown function DUF1876 [Frankia symbiont of Datisca
glomerata]
Length=102
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/83 (47%), Positives = 53/83 (64%), Gaps = 5/83 (6%)
Query 9 KTCQIDVLIEEHDERTRAKARL-----SWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
K +DVL+ E D TRA+A L S + R++ GVG AR PAD + +IGDE+A +R
Sbjct 5 KRWTVDVLLTEDDGHTRAEAALRPGPRSDSERELRGVGHARRHPADAEIPKIGDEVAASR 64
Query 64 ALSDLANQLFALTSSDIEASTHQ 86
ALS+LA+ L + + IEA THQ
Sbjct 65 ALSELAHLLLDVAAGHIEAVTHQ 87
>gi|269127102|ref|YP_003300472.1| hypothetical protein Tcur_2889 [Thermomonospora curvata DSM 43183]
gi|268312060|gb|ACY98434.1| Domain of unknown function DUF1876 [Thermomonospora curvata DSM
43183]
Length=88
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/87 (41%), Positives = 49/87 (57%), Gaps = 0/87 (0%)
Query 6 HVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARAL 65
H K Q+ V I E D T A+A+LS + G G+AR +P D V IGDELA++RAL
Sbjct 2 HQDKDWQLTVHISEQDRYTEAEAKLSTPNGTLTGRGVARRNPRDADVPSIGDELAVSRAL 61
Query 66 SDLANQLFALTSSDIEASTHQPVTGLH 92
S+L++ L + +I H+ V H
Sbjct 62 SELSHGLLDAAAREISQIEHRKVRLTH 88
>gi|226359502|ref|YP_002777279.1| hypothetical protein ROP_00870 [Rhodococcus opacus B4]
gi|226237986|dbj|BAH48334.1| hypothetical protein [Rhodococcus opacus B4]
Length=103
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (44%), Positives = 48/71 (68%), Gaps = 6/71 (8%)
Query 9 KTCQIDVLIEEHDE-----RTRAKARLSWAGRQ-MVGVGLARLDPADEPVAQIGDELAIA 62
KT ++++I+EH +TRA+ARL +GR VG GLAR +P V ++ D++A A
Sbjct 4 KTWSVNIVIDEHKSAETGAQTRARARLRTSGRAAFVGTGLARRNPHHTDVPEVSDDMAAA 63
Query 63 RALSDLANQLF 73
RAL+DL++QL+
Sbjct 64 RALADLSHQLY 74
>gi|333918867|ref|YP_004492448.1| hypothetical protein AS9A_1196 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481088|gb|AEF39648.1| hypothetical protein AS9A_1196 [Amycolicicoccus subflavus DQS3-9A1]
Length=89
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/81 (51%), Positives = 57/81 (71%), Gaps = 2/81 (2%)
Query 9 KTCQIDVLIEEHDERTRAKARL--SWAGRQMVGVGLARLDPADEPVAQIGDELAIARALS 66
K +++LI+E + +T A+ARL R++VG G+AR +P D V IGDELA ARAL+
Sbjct 4 KHWSVEILIDERNGQTHAEARLHADEGSRKLVGTGVARKNPDDRDVPLIGDELAAARALA 63
Query 67 DLANQLFALTSSDIEASTHQP 87
DL++QL T+SDIE+STH P
Sbjct 64 DLSHQLIEQTASDIESSTHVP 84
>gi|291006772|ref|ZP_06564745.1| hypothetical protein SeryN2_19808 [Saccharopolyspora erythraea
NRRL 2338]
Length=103
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/88 (40%), Positives = 53/88 (61%), Gaps = 5/88 (5%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDEL 59
M +EH +D+ ++E +ERT A+ARL + + G GLA+ +P D V +IG EL
Sbjct 15 MVSTEH----WSVDIYLDEDEERTHAEARLHTRDATDLRGRGLAKRNPHDRDVPEIGAEL 70
Query 60 AIARALSDLANQLFALTSSDIEASTHQP 87
A ARAL +LA+ L + D+E +T +P
Sbjct 71 AAARALFELAHHLLRAATEDVEQATGRP 98
>gi|134098988|ref|YP_001104649.1| hypothetical protein SACE_2426 [Saccharopolyspora erythraea NRRL
2338]
gi|133911611|emb|CAM01724.1| hypothetical protein SACE_2426 [Saccharopolyspora erythraea NRRL
2338]
Length=89
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/88 (40%), Positives = 53/88 (61%), Gaps = 5/88 (5%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDEL 59
M +EH +D+ ++E +ERT A+ARL + + G GLA+ +P D V +IG EL
Sbjct 1 MVSTEH----WSVDIYLDEDEERTHAEARLHTRDATDLRGRGLAKRNPHDRDVPEIGAEL 56
Query 60 AIARALSDLANQLFALTSSDIEASTHQP 87
A ARAL +LA+ L + D+E +T +P
Sbjct 57 AAARALFELAHHLLRAATEDVEQATGRP 84
>gi|291302646|ref|YP_003513924.1| hypothetical protein Snas_5196 [Stackebrandtia nassauensis DSM
44728]
gi|290571866|gb|ADD44831.1| Domain of unknown function DUF1876 [Stackebrandtia nassauensis
DSM 44728]
Length=92
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (37%), Positives = 51/87 (59%), Gaps = 1/87 (1%)
Query 1 MTDSEHVGKTCQIDVLIEEHDERTRAKARLSW-AGRQMVGVGLARLDPADEPVAQIGDEL 59
MT + + + + EE+ + T A A L+ GR++ G G AR +P D PVA+IG+E+
Sbjct 1 MTTMPMLKTSWNVTIDFEENPDSTIATATLTAPTGRELKGTGRARRNPGDRPVARIGEEV 60
Query 60 AIARALSDLANQLFALTSSDIEASTHQ 86
A ARALS L + L +++IE + +
Sbjct 61 ACARALSQLTHSLLDYAATEIEMNVRR 87
>gi|9653922|gb|AAF93174.1| unknown [Mycobacterium bovis BCG]
Length=56
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/51 (53%), Positives = 38/51 (75%), Gaps = 0/51 (0%)
Query 4 SEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQ 54
S+HV + +D+ I+EH+ TRAKARL W +++VGVGLARL+PAD V +
Sbjct 6 SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPE 56
>gi|332670397|ref|YP_004453405.1| hypothetical protein Celf_1888 [Cellulomonas fimi ATCC 484]
gi|332339435|gb|AEE46018.1| Domain of unknown function DUF1876 [Cellulomonas fimi ATCC 484]
Length=90
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (54%), Positives = 36/56 (65%), Gaps = 0/56 (0%)
Query 33 AGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPV 88
AG ++G G AR P+D V +IG ELA+ARAL LA+QL TS DI A H PV
Sbjct 31 AGTTLLGTGRARRRPSDTDVPEIGGELAVARALRSLADQLLEATSGDIAAIEHHPV 86
>gi|345011497|ref|YP_004813851.1| hypothetical protein Strvi_3910 [Streptomyces violaceusniger
Tu 4113]
gi|344037846|gb|AEM83571.1| Domain of unknown function DUF1876 [Streptomyces violaceusniger
Tu 4113]
Length=96
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (42%), Positives = 43/78 (56%), Gaps = 0/78 (0%)
Query 12 QIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQ 71
++ + + E + RT A+ L + G GLAR +P DE V IGDELA ARALSDL Q
Sbjct 8 RVHLYLSEDEGRTMARVELDTGSAALTGRGLARCNPDDEDVPVIGDELAAARALSDLGQQ 67
Query 72 LFALTSSDIEASTHQPVT 89
L D+E+ P +
Sbjct 68 LVHAAERDLESVGAPPAS 85
>gi|311895311|dbj|BAJ27719.1| hypothetical protein KSE_18950 [Kitasatospora setae KM-6054]
Length=87
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (41%), Positives = 44/77 (58%), Gaps = 1/77 (1%)
Query 13 IDVLIEEHDERTRAKARLS-WAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQ 71
+D+ +E + RT A LS ++ G G AR +PADE + +G+ELA ARA DLA Q
Sbjct 7 VDLTFDEDESRTTCTAALSGFSAPGARGTGTARRNPADEADSTVGEELAAARACDDLARQ 66
Query 72 LFALTSSDIEASTHQPV 88
L + +E+ TH P
Sbjct 67 LIGHAARGVESHTHTPA 83
>gi|72162361|ref|YP_290018.1| hypothetical protein Tfu_1962 [Thermobifida fusca YX]
gi|71916093|gb|AAZ55995.1| hypothetical protein Tfu_1962 [Thermobifida fusca YX]
Length=169
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/81 (44%), Positives = 49/81 (61%), Gaps = 4/81 (4%)
Query 9 KTCQIDVLIEEHDE----RTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARA 64
K QIDV + E E RT A+A+L + G G AR P D + +IG+ELA+ARA
Sbjct 84 KRIQIDVAVSEVHENGSVRTLAEAQLPSTKWNLRGHGEARKHPTDADIPEIGEELAVARA 143
Query 65 LSDLANQLFALTSSDIEASTH 85
LSDLA++L + + DIE ++
Sbjct 144 LSDLAHKLRRVAAEDIEQASQ 164
>gi|86740264|ref|YP_480664.1| hypothetical protein Francci3_1559 [Frankia sp. CcI3]
gi|86567126|gb|ABD10935.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=88
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (62%), Gaps = 1/80 (1%)
Query 9 KTCQIDVLIEEHDERTRAKARLSWAGRQ-MVGVGLARLDPADEPVAQIGDELAIARALSD 67
+T + + + E RT+A A L + R + G G ARL P + V +IGDE+A ARALS+
Sbjct 5 RTWTVQISLTEQHGRTQADAALHGSARDDLHGTGQARLHPGESDVPEIGDEVAAARALSE 64
Query 68 LANQLFALTSSDIEASTHQP 87
LA++LF + +I+A+ P
Sbjct 65 LAHRLFDAAAENIQAAMAGP 84
>gi|331698631|ref|YP_004334870.1| hypothetical protein Psed_4873 [Pseudonocardia dioxanivorans
CB1190]
gi|326953320|gb|AEA27017.1| Domain of unknown function DUF1876 [Pseudonocardia dioxanivorans
CB1190]
Length=87
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/59 (51%), Positives = 39/59 (67%), Gaps = 1/59 (1%)
Query 6 HVGKTCQIDVLIEEHDERTRAKARL-SWAGRQMVGVGLARLDPADEPVAQIGDELAIAR 63
H K + + I+EH+ RTRA A L + R + G GLARL+PAD V +IGDELA+AR
Sbjct 2 HEAKRWNVTLDIDEHEGRTRAVAHLHTRDARSLTGEGLARLNPADRDVPEIGDELAVAR 60
>gi|297560903|ref|YP_003679877.1| hypothetical protein Ndas_1944 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845351|gb|ADH67371.1| Domain of unknown function DUF1918 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=168
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (37%), Positives = 51/93 (55%), Gaps = 11/93 (11%)
Query 3 DSEHVGKTCQIDVLIEEHDERTRAKARLSWA--------GRQMVGVGLARLDPADEPVAQ 54
D+ K +DV++ E +E A+ +WA G + G G+AR P D V +
Sbjct 75 DAMQTTKRWNVDVVVAEENEGDSAR---TWAEVGLVADDGTALRGHGMARKHPTDLDVPE 131
Query 55 IGDELAIARALSDLANQLFALTSSDIEASTHQP 87
IG+ELA++RALSDL+ QL + + DI +T P
Sbjct 132 IGEELAVSRALSDLSRQLRQVAAEDITDNTGTP 164
>gi|328880396|emb|CCA53635.1| hypothetical protein SVEN_0348 [Streptomyces venezuelae ATCC
10712]
Length=99
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (43%), Positives = 42/70 (60%), Gaps = 0/70 (0%)
Query 13 IDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQL 72
+ V + E D T+A+ARL + G G AR +PAD V IGDELA +RA+ DLA +L
Sbjct 9 VGVELVEEDGTTKAEARLLTGNSNLTGHGSARCNPADVDVPAIGDELAASRAMKDLAGKL 68
Query 73 FALTSSDIEA 82
+ ++EA
Sbjct 69 MREANREMEA 78
>gi|302539906|ref|ZP_07292248.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302457524|gb|EFL20617.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length=96
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (42%), Positives = 41/73 (57%), Gaps = 1/73 (1%)
Query 11 CQIDVLIEEHDE-RTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLA 69
++ + + E DE RT+A+ L + G G AR +P D + IGDELA RALSDL
Sbjct 7 WKVHLYVFEDDEGRTKARVELDTGAAALTGRGTARRNPEDRDIPVIGDELAAGRALSDLG 66
Query 70 NQLFALTSSDIEA 82
+QL DIE+
Sbjct 67 HQLLRAAEHDIES 79
>gi|291441659|ref|ZP_06581049.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291344554|gb|EFE71510.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length=94
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (38%), Positives = 45/78 (58%), Gaps = 1/78 (1%)
Query 6 HVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARAL 65
H G+ ++ + + E T+A+A + R++ G G+A +PAD V +IGDELA RA+
Sbjct 3 HTGE-WKVRLHLFEDGGTTKARAVIDTGTRELTGHGVAHRNPADTDVPEIGDELAAGRAM 61
Query 66 SDLANQLFALTSSDIEAS 83
DL QL + DIE +
Sbjct 62 QDLGRQLVEIAERDIEGT 79
>gi|337764661|emb|CCB73370.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=89
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 37/68 (55%), Gaps = 0/68 (0%)
Query 14 DVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLF 73
DV + E D+ T AK L + G G+A +P D V +IGDELA RA +DLA QL
Sbjct 10 DVFLVEDDDVTEAKVTLHTLNTALTGHGVAHRNPLDPQVPRIGDELATGRAFADLARQLI 69
Query 74 ALTSSDIE 81
DI+
Sbjct 70 GTAQEDID 77
>gi|312197432|ref|YP_004017493.1| hypothetical protein FraEuI1c_3616 [Frankia sp. EuI1c]
gi|311228768|gb|ADP81623.1| Domain of unknown function DUF1876 [Frankia sp. EuI1c]
Length=99
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/89 (40%), Positives = 45/89 (51%), Gaps = 13/89 (14%)
Query 9 KTCQIDVLIEEHDERTRAKARLSWAGRQMV-------------GVGLARLDPADEPVAQI 55
KT + V + E RTRA+A L G + GLAR P D V I
Sbjct 3 KTWNVAVTLTEEGGRTRAEAHLHGTGTSQLGLGLAGMGGGELRAKGLARCHPNDADVPAI 62
Query 56 GDELAIARALSDLANQLFALTSSDIEAST 84
GDE+A++RALSDLA+QL + IE+ T
Sbjct 63 GDEVAVSRALSDLAHQLLDAAARTIESRT 91
>gi|254381632|ref|ZP_04996996.1| hypothetical protein SSAG_01298 [Streptomyces sp. Mg1]
gi|194340541|gb|EDX21507.1| hypothetical protein SSAG_01298 [Streptomyces sp. Mg1]
Length=99
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (54%), Gaps = 0/80 (0%)
Query 12 QIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQ 71
++ + + D T+A+ L ++ G G AR P D V +IGDELA+ARA+ DLA Q
Sbjct 8 KVRLYLFGDDHTTKARLELDTGTNRLTGHGTARCAPRDNDVPEIGDELAVARAMEDLALQ 67
Query 72 LFALTSSDIEASTHQPVTGL 91
+ D++A+ P L
Sbjct 68 MKRAAYGDMQAAGAPPCRSL 87
>gi|297154474|gb|ADI04186.1| hypothetical protein SBI_01065 [Streptomyces bingchenggensis
BCW-1]
Length=95
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (38%), Positives = 40/78 (52%), Gaps = 2/78 (2%)
Query 12 QIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQ 71
++ + + E T+A+ L G G+AR P D V +IGDELA RA+ DL Q
Sbjct 8 KVHLYLYEDQGTTKARVVLDTEETSFTGRGVARCSPDDHEVPEIGDELAAGRAMHDLGEQ 67
Query 72 LFALTSSDIEA--STHQP 87
L DIE +TH+P
Sbjct 68 LLIAAERDIEGEIATHRP 85
>gi|302557031|ref|ZP_07309373.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302474649|gb|EFL37742.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length=94
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (40%), Positives = 38/69 (56%), Gaps = 0/69 (0%)
Query 15 VLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFA 74
+ + E D T+A+A + + G G AR +PAD V +IGDELA RAL DL QL
Sbjct 11 LYLFEEDGTTKARAMVDTGTTVLTGHGAARRNPADPDVPEIGDELAAGRALQDLGRQLLD 70
Query 75 LTSSDIEAS 83
+ D+ +
Sbjct 71 IAERDVRVT 79
>gi|306811887|gb|ADN05984.1| conserved hypothetical protein DUF1876 family [uncultured Myxococcales
bacterium]
Length=88
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (44%), Positives = 40/64 (63%), Gaps = 0/64 (0%)
Query 9 KTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDL 68
K+ + + + E + T AKARL+ G ++VG G A+ +P D IGDELAIAR+L L
Sbjct 5 KSFTVKIEVVEEGDTTDAKARLAIGGAELVGRGKAKRNPDDPDRPLIGDELAIARSLLVL 64
Query 69 ANQL 72
A +L
Sbjct 65 AREL 68
Lambda K H
0.316 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127811470620
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40