BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2633c
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609770|ref|NP_217149.1| hypothetical protein Rv2633c [Mycob... 326 7e-88
gi|289444174|ref|ZP_06433918.1| conserved hypothetical protein [... 323 5e-87
gi|289758764|ref|ZP_06518142.1| LOW QUALITY PROTEIN: conserved h... 322 1e-86
gi|342858543|ref|ZP_08715198.1| hemerythrin HHE cation binding d... 261 2e-68
gi|240170608|ref|ZP_04749267.1| hemerythrin HHE cation binding d... 259 8e-68
gi|41408830|ref|NP_961666.1| hypothetical protein MAP2732c [Myco... 258 1e-67
gi|254818995|ref|ZP_05223996.1| hemerythrin HHE cation binding d... 255 2e-66
gi|296170921|ref|ZP_06852458.1| conserved hypothetical protein [... 253 5e-66
gi|333990165|ref|YP_004522779.1| hypothetical protein JDM601_152... 182 2e-44
gi|167967273|ref|ZP_02549550.1| hypothetical protein MtubH3_0423... 177 3e-43
gi|254818886|ref|ZP_05223887.1| hemerythrin HHE cation binding d... 121 5e-26
gi|254823107|ref|ZP_05228108.1| hemerythrin HHE cation binding d... 63.2 1e-08
gi|162456422|ref|YP_001618789.1| hypothetical protein sce8139 [S... 57.8 5e-07
gi|88812851|ref|ZP_01128096.1| hypothetical protein NB231_07732 ... 49.7 1e-04
gi|262197572|ref|YP_003268781.1| hemerythrin HHE cation binding ... 48.9 2e-04
gi|330503342|ref|YP_004380211.1| hemerythrin HHE cation binding ... 46.2 0.001
gi|334140482|ref|YP_004533684.1| hemerythrin HHE cation binding ... 45.8 0.002
gi|77458631|ref|YP_348136.1| hemerythrin HHE cation binding prot... 45.8 0.002
gi|222053389|ref|YP_002535751.1| Hemerythrin HHE cation binding ... 45.4 0.003
gi|326332687|ref|ZP_08198950.1| hemerythrin HHE cation binding r... 44.7 0.005
gi|108758710|ref|YP_635317.1| hypothetical protein MXAN_7204 [My... 44.7 0.005
gi|226953791|ref|ZP_03824255.1| hemerythrin HHE cation binding r... 44.3 0.006
gi|254788109|ref|YP_003075538.1| hemerythrin HHE cation binding ... 42.7 0.016
gi|167648257|ref|YP_001685920.1| hemerythrin HHE cation-binding ... 42.0 0.034
gi|115375938|ref|ZP_01463186.1| hemerythrin HHE cation binding r... 41.6 0.036
gi|337762994|emb|CCB71702.1| conserved protein of unknown functi... 41.6 0.045
gi|294651724|ref|ZP_06729025.1| hemerythrin [Acinetobacter haemo... 41.2 0.048
gi|338531723|ref|YP_004665057.1| hypothetical protein LILAB_1034... 40.8 0.062
gi|334111684|ref|ZP_08485953.1| Hemerythrin HHE cation binding d... 40.4 0.088
gi|56476352|ref|YP_157941.1| hypothetical protein ebA1694 [Aroma... 40.4 0.090
gi|254000272|ref|YP_003052335.1| Hemerythrin HHE cation-binding ... 40.4 0.10
gi|254380916|ref|ZP_04996282.1| conserved hypothetical protein [... 40.0 0.10
gi|226942199|ref|YP_002797272.1| hemerythrin HHE cation binding ... 40.0 0.11
gi|222053391|ref|YP_002535753.1| Hemerythrin HHE cation binding ... 40.0 0.13
gi|313202231|ref|YP_004040889.1| hemerythrin hhe cation-binding ... 39.7 0.15
gi|54310855|gb|AAV33667.1| MnbG [Comamonas sp. JS46] 39.7 0.16
gi|295681257|ref|YP_003609831.1| hemerythrin HHE cation binding ... 39.7 0.17
gi|116622539|ref|YP_824695.1| hemerythrin HHE cation binding dom... 39.7 0.17
gi|312797491|ref|YP_004030413.1| hypothetical protein RBRH_03069... 39.7 0.17
gi|162452503|ref|YP_001614870.1| hypothetical protein sce4227 [S... 39.3 0.19
gi|85708400|ref|ZP_01039466.1| Hemerythrin [Erythrobacter sp. NA... 39.3 0.20
gi|238022040|ref|ZP_04602466.1| hypothetical protein GCWU000324_... 39.3 0.21
gi|260061626|ref|YP_003194706.1| hypothetical protein RB2501_084... 39.3 0.21
gi|149184280|ref|ZP_01862598.1| hypothetical protein ED21_26218 ... 39.3 0.22
gi|146307329|ref|YP_001187794.1| hemerythrin HHE cation binding ... 39.3 0.23
gi|334120556|ref|ZP_08494636.1| Hemerythrin HHE cation binding d... 38.9 0.23
gi|254498194|ref|ZP_05110943.1| hemerythrin HHE cation binding d... 38.9 0.26
gi|74318266|ref|YP_316006.1| hypothetical protein Tbd_2248 [Thio... 38.9 0.29
gi|330810480|ref|YP_004354942.1| hypothetical protein PSEBR_a359... 38.5 0.30
gi|329119510|ref|ZP_08248195.1| hemerythrin HHE cation binding r... 38.5 0.30
>gi|15609770|ref|NP_217149.1| hypothetical protein Rv2633c [Mycobacterium tuberculosis H37Rv]
gi|15842173|ref|NP_337210.1| hypothetical protein MT2709 [Mycobacterium tuberculosis CDC1551]
gi|31793819|ref|NP_856312.1| hypothetical protein Mb2666c [Mycobacterium bovis AF2122/97]
75 more sequence titles
Length=161
Score = 326 bits (836), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA
Sbjct 1 MNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV
Sbjct 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI
Sbjct 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
>gi|289444174|ref|ZP_06433918.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289570805|ref|ZP_06451032.1| hypothetical protein TBJG_03893 [Mycobacterium tuberculosis T17]
gi|289751259|ref|ZP_06510637.1| hypothetical protein TBDG_03428 [Mycobacterium tuberculosis T92]
gi|289417093|gb|EFD14333.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289544559|gb|EFD48207.1| hypothetical protein TBJG_03893 [Mycobacterium tuberculosis T17]
gi|289691846|gb|EFD59275.1| hypothetical protein TBDG_03428 [Mycobacterium tuberculosis T92]
Length=161
Score = 323 bits (828), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/161 (99%), Positives = 160/161 (99%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLF EMLIELDIHFRIEDDLYYPALSAA
Sbjct 1 MNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFGEMLIELDIHFRIEDDLYYPALSAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV
Sbjct 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI
Sbjct 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
>gi|289758764|ref|ZP_06518142.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
gi|289714328|gb|EFD78340.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
Length=161
Score = 322 bits (825), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA
Sbjct 1 MNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV
Sbjct 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLK 159
HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLK
Sbjct 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLK 159
>gi|342858543|ref|ZP_08715198.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
colombiense CECT 3035]
gi|342134247|gb|EGT87427.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
colombiense CECT 3035]
Length=161
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/161 (78%), Positives = 139/161 (87%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLK HH V+KGLGRK+ EAPVNSEERH LFDEMLIELDIHFRIEDDLYYPAL AA
Sbjct 1 MNAYDVLKDHHVVIKGLGRKISEAPVNSEERHALFDEMLIELDIHFRIEDDLYYPALKAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
K I HAEHRQVVDQL+ LLRTPQ APGYE+EWN F+TVLEAHAD EERDMIPAP V
Sbjct 61 SKLIAVAHAEHRQVVDQLSVLLRTPQSAPGYEDEWNSFKTVLEAHADEEERDMIPAPPEV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
ITDAELEELG+KMAAR+EQ RGS Y +RTKG+A L++++
Sbjct 121 KITDAELEELGNKMAARMEQYRGSATYKMRTKGRAALVRSL 161
>gi|240170608|ref|ZP_04749267.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
kansasii ATCC 12478]
Length=161
Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/161 (78%), Positives = 140/161 (87%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAY+VLK HH V+KGLGRK+ EAPVNSEERH LFDE+LIELDIHFRIEDDLYYPALSAA
Sbjct 1 MNAYEVLKEHHVVIKGLGRKISEAPVNSEERHALFDELLIELDIHFRIEDDLYYPALSAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
K I HAEHRQV+DQL+ LLRTPQ PGYE+EWN F+TVLEAHAD EERDMIPAP V
Sbjct 61 TKLIAVAHAEHRQVIDQLSVLLRTPQSEPGYEDEWNSFKTVLEAHADEEERDMIPAPPEV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
ITDAELEELG+KMAAR+EQ RGS LY LRTKG+A L++++
Sbjct 121 KITDAELEELGEKMAARMEQYRGSALYKLRTKGRAALVRSL 161
>gi|41408830|ref|NP_961666.1| hypothetical protein MAP2732c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462263|ref|YP_882689.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
avium 104]
gi|254775957|ref|ZP_05217473.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|41397189|gb|AAS05049.1| hypothetical protein MAP_2732c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118163550|gb|ABK64447.1| hemerythrin HHE cation binding domain protein [Mycobacterium
avium 104]
gi|336458894|gb|EGO37851.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
avium subsp. paratuberculosis S397]
Length=161
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/161 (76%), Positives = 139/161 (87%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLK HH V+KGLGRK+ EAPVNSEERH LFD++LIELDIHFRIEDDLYYPAL A
Sbjct 1 MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
K I HAEHRQVVDQL+ LLRTPQ AP YE+EWN F+TVLEAHAD EERDMIPAP V
Sbjct 61 SKLIAVAHAEHRQVVDQLSVLLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
HITDAELEELG+KMAA++EQ RGS LY +RTKG+A L++++
Sbjct 121 HITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRSL 161
>gi|254818995|ref|ZP_05223996.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length=161
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/161 (78%), Positives = 139/161 (87%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLK HH VLKGLGRKV EAP+NSEERH LFD+MLIELDIHFRIEDDLYYPAL AA
Sbjct 1 MNAYDVLKEHHIVLKGLGRKVSEAPLNSEERHALFDDMLIELDIHFRIEDDLYYPALRAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
K I HAEHRQVVDQL+ LL+TPQ APGYE+EWN F+TVLEAHAD EERDMIPAP V
Sbjct 61 TKLIAVAHAEHRQVVDQLSVLLKTPQSAPGYEDEWNSFKTVLEAHADEEERDMIPAPPQV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
ITDAELEELG+KMAA IEQ RGS ++ LRT+G+A L++A+
Sbjct 121 KITDAELEELGNKMAATIEQYRGSAVHRLRTRGRAALIRAL 161
>gi|296170921|ref|ZP_06852458.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894470|gb|EFG74214.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=161
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/161 (75%), Positives = 139/161 (87%), Gaps = 0/161 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVLK HH V+KGLGRK+ EAPVNSEERH LFD+MLIELDIHFRIEDDLYYPAL A
Sbjct 1 MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDMLIELDIHFRIEDDLYYPALKDA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPV 120
K I HAEHRQVVDQL+ LL+TPQ APGYE+EWN F+TVLEAHAD EERD+IPAP V
Sbjct 61 TKLIAVAHAEHRQVVDQLSVLLKTPQSAPGYEDEWNSFKTVLEAHADEEERDLIPAPPEV 120
Query 121 HITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKAI 161
ITDAELEELG+KMAA++E+ RGS LY +RTKG+A L++++
Sbjct 121 KITDAELEELGNKMAAKMEEYRGSALYKMRTKGRAALVRSL 161
>gi|333990165|ref|YP_004522779.1| hypothetical protein JDM601_1525 [Mycobacterium sp. JDM601]
gi|333486133|gb|AEF35525.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=164
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/157 (57%), Positives = 110/157 (71%), Gaps = 0/157 (0%)
Query 2 NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAG 61
NAYDVL+ HH VL+GLG + APV S ER + DE+L E IH RIEDD+YYPAL+AA
Sbjct 3 NAYDVLRDHHNVLRGLGGRFKAAPVGSVERQAILDELLREFTIHMRIEDDIYYPALAAAS 62
Query 62 KPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVH 121
+ I HAEHRQ+ DQLA LRTP +P + +EWN F VLEAHAD EERD++P P P+
Sbjct 63 RLIAIAHAEHRQIYDQLAVALRTPAHSPRHVDEWNSFLIVLEAHADEEERDLVPPPAPID 122
Query 122 ITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLL 158
+TDAEL+ELG++M A +E+ R S L K +A L
Sbjct 123 LTDAELDELGNRMLAEMERQRNSRFEQLHVKARAKFL 159
>gi|167967273|ref|ZP_02549550.1| hypothetical protein MtubH3_04237 [Mycobacterium tuberculosis
H37Ra]
Length=88
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/88 (99%), Positives = 88/88 (100%), Gaps = 0/88 (0%)
Query 74 VVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDK 133
+VDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDK
Sbjct 1 MVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDK 60
Query 134 MAARIEQLRGSPLYTLRTKGKADLLKAI 161
MAARIEQLRGSPLYTLRTKGKADLLKAI
Sbjct 61 MAARIEQLRGSPLYTLRTKGKADLLKAI 88
>gi|254818886|ref|ZP_05223887.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length=97
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 69/95 (73%), Gaps = 0/95 (0%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+NAYDVL HH VL+GL ++ P ++ER V DE+LIELD+H RIEDDL+YPA+SAA
Sbjct 1 MNAYDVLFEHHRVLRGLCERITAIPPEADERQVALDELLIELDVHMRIEDDLFYPAVSAA 60
Query 61 GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEW 95
+ HAEHRQV DQLA LLRT AP YE+EW
Sbjct 61 STLVAIAHAEHRQVWDQLAVLLRTSPTAPDYEDEW 95
>gi|254823107|ref|ZP_05228108.1| hemerythrin HHE cation binding domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length=63
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (71%), Gaps = 2/64 (3%)
Query 98 FRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADL 157
F TVL+AHA EERD+ PAP + +++ LE LG++M RI +LRGS L LR +G+A L
Sbjct 2 FVTVLDAHASEEERDLCPAP--IDLSEDMLERLGNRMIERIARLRGSTLNRLRVRGRAAL 59
Query 158 LKAI 161
L ++
Sbjct 60 LSSL 63
>gi|162456422|ref|YP_001618789.1| hypothetical protein sce8139 [Sorangium cellulosum 'So ce 56']
gi|161167004|emb|CAN98309.1| hypothetical protein sce8139 [Sorangium cellulosum 'So ce 56']
Length=254
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/154 (32%), Positives = 79/154 (52%), Gaps = 10/154 (6%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYP----A 56
+ A D+LK HH ++ L ++ +A +S+E L DE++ L H IE++L+YP A
Sbjct 1 MKATDLLKEHHQEVEELFERMSQA--DSDEISALRDELVATLVSHTAIEEELFYPESREA 58
Query 57 LSAAGKPITGTHAEHRQVVD-QLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
L A+ P+ T E +VD L LL T + V + +++ H + EE+ + P
Sbjct 59 LGAS--PLIPTSYEEHALVDVMLQKLLSTEPGDETFHARLGVLKELVQHHVEEEEKKLFP 116
Query 116 APTPVHITDAELEELGDKMAARIEQLRGSPLYTL 149
+ A LEELG ++ AR Q+R S + L
Sbjct 117 Q-VESAMGAARLEELGSRLEARFGQVRKSDVEAL 149
>gi|88812851|ref|ZP_01128096.1| hypothetical protein NB231_07732 [Nitrococcus mobilis Nb-231]
gi|88789921|gb|EAR21043.1| hypothetical protein NB231_07732 [Nitrococcus mobilis Nb-231]
Length=321
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (32%), Positives = 60/113 (54%), Gaps = 4/113 (3%)
Query 28 SEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKP---ITGTHAEHRQVVDQLATLLRT 84
S E+H LF E+ EL+IH +IE++L+YPAL +G + AEH++V L+ L +
Sbjct 27 SAEQHQLFRELKDELEIHAQIEEELFYPALHGSGGKDLCVDECIAEHKKVRLLLSQLEQM 86
Query 85 PQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAAR 137
+ + + +E H EER++ P + +A+ L ++MAAR
Sbjct 87 IPGSDSWARSLDALNNEVEHHIKKEERELFPRMRTLLTQEAQ-GALLERMAAR 138
>gi|262197572|ref|YP_003268781.1| hemerythrin HHE cation binding domain protein [Haliangium ochraceum
DSM 14365]
gi|262080919|gb|ACY16888.1| Hemerythrin HHE cation binding domain protein [Haliangium ochraceum
DSM 14365]
Length=147
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (29%), Positives = 69/142 (49%), Gaps = 8/142 (5%)
Query 4 YDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSA---- 59
YD LK+ H L+ L K+ E +SEER LF++ L+ H E+ +Y + A
Sbjct 5 YDALKQDHRELEELMTKLVETEGDSEERAKLFEDFSELLEKHSHAEERAFYSKVLARPET 64
Query 60 AGKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTP 119
GK G EH + + L L T + +PG+ + R ++ H D EE ++ P
Sbjct 65 RGKTAHGV-KEHCEAAELLDELKETERSSPGWLHKMKKLREDVKHHIDEEENELFPKAKT 123
Query 120 VHITDAELEELGD--KMAARIE 139
V ++ + +++G+ K R+E
Sbjct 124 V-LSAEQAQQIGNSFKKEKRVE 144
>gi|330503342|ref|YP_004380211.1| hemerythrin HHE cation binding domain-containing protein [Pseudomonas
mendocina NK-01]
gi|328917628|gb|AEB58459.1| hemerythrin HHE cation binding domain-containing protein [Pseudomonas
mendocina NK-01]
Length=156
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/151 (31%), Positives = 73/151 (49%), Gaps = 8/151 (5%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
+NA ++LK+ H +K L K+ E + + R L ++ EL IH +E+ ++YPA
Sbjct 1 MNAIELLKKDHETVKDLLSKLEETTERAVQTRKKLLLKIEQELKIHTELEEQIFYPAFRQ 60
Query 60 AGKPITGTHA-----EHRQV-VDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDM 113
AG A EHR V L + TP + V + +LE H + EERDM
Sbjct 61 AGSKDEAVLAVEAKEEHRAVEALVLPDIKETPPSTVEFAGRVKVLKELLEHHIEEEERDM 120
Query 114 IPAPTPVHITDAELEELGDKMAARIEQLRGS 144
P + ++ +LE+LG+ M + L+ S
Sbjct 121 FPQARKL-LSKQQLEQLGESMEVLRKSLKSS 150
>gi|334140482|ref|YP_004533684.1| hemerythrin HHE cation binding region [Novosphingobium sp. PP1Y]
gi|333938508|emb|CCA91866.1| hemerythrin HHE cation binding region [Novosphingobium sp. PP1Y]
Length=160
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (31%), Positives = 56/116 (49%), Gaps = 3/116 (2%)
Query 4 YDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDD-LYYPALSAAGK 62
+ LK H + + ++GE +S ER LF+E+ +EL H E++ LY L+
Sbjct 7 FQDLKADHDRHRKMLEQLGETQGDSNERRALFEELRLELQAHAAAEEESLYATMLADPDL 66
Query 63 PITGTH--AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPA 116
H +EH+++ D LA L+ T + + ++ R H D EE DM PA
Sbjct 67 RDEARHSVSEHKEIDDFLAELMDTDMSSGAWLTKFKDMRHRYLHHIDEEEEDMFPA 122
>gi|77458631|ref|YP_348136.1| hemerythrin HHE cation binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77382634|gb|ABA74147.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length=158
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/152 (31%), Positives = 75/152 (50%), Gaps = 10/152 (6%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
+NA D+LK H +KG+ ++ E+ + ++R L D++ +E+ IH ++E+ + YPA
Sbjct 1 MNAIDLLKTDHEKVKGILNQLSESTDRALKKRAELLDKLELEITIHTQLEEQILYPAFKE 60
Query 60 AGKPITG-----THAEHRQVVDQLA--TLLRTPQRAPGYEEEWNVFRTVLEAHADVEERD 112
AG EHR VD L L T P + V + +LE H + EE +
Sbjct 61 AGDKEQDEMYYEAKEEHR-TVDSLVLPDLKSTDPSTPEFAGRVKVVKELLEHHIEEEETE 119
Query 113 MIPAPTPVHITDAELEELGDKMAARIEQLRGS 144
M P + + A+LEELG +M L+ S
Sbjct 120 MFPQARKL-LGKAKLEELGKEMEVMKASLKKS 150
>gi|222053389|ref|YP_002535751.1| Hemerythrin HHE cation binding domain protein [Geobacter sp.
FRC-32]
gi|221562678|gb|ACM18650.1| Hemerythrin HHE cation binding domain protein [Geobacter sp.
FRC-32]
Length=169
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/144 (25%), Positives = 67/144 (47%), Gaps = 16/144 (11%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
+ + +L+ H + L K+ +A + +++ LF ++ EL+ H E+ +YP L
Sbjct 9 TDVFQILRTDHQEVSKLMDKIKQA--DGQQKQQLFSQLQEELNNHMNQEEKFFYPKLEEI 66
Query 61 ---GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEA----HADVEERDM 113
+ ++A+H D + +L+ EEW LE H DVEE ++
Sbjct 67 EDLADLVQDSYADH----DDIRQILQQMNEQDFNSEEWQANCEALEDTKDDHVDVEEEEI 122
Query 114 IPAPTPVHITDAE-LEELGDKMAA 136
P + + DA L ++G+++AA
Sbjct 123 F--PQAMELVDASVLNQIGEQIAA 144
>gi|326332687|ref|ZP_08198950.1| hemerythrin HHE cation binding region [Nocardioidaceae bacterium
Broad-1]
gi|325949515|gb|EGD41592.1| hemerythrin HHE cation binding region [Nocardioidaceae bacterium
Broad-1]
Length=191
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/114 (29%), Positives = 61/114 (54%), Gaps = 8/114 (7%)
Query 6 VLKRHHTVLKGLGRKVGEAPVNSE--ERHVLFDEMLIELDIHFRIEDDLYYPALSA-AGK 62
+L + H ++ L VG NSE + FD++ + L +H E+ + +P +SA G+
Sbjct 22 ILLQQHAGIRQLCSTVG----NSEGPAKRQAFDDLRVLLAVHETAEELVVHPFVSAHGGE 77
Query 63 PIT-GTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
+T +A+ ++ + LA L +P ++E + +F+ V+E HA+ EER P
Sbjct 78 TLTKALNADEKEASEMLARLEEVGVESPEFDESFPIFQIVVEQHAEEEERVEFP 131
>gi|108758710|ref|YP_635317.1| hypothetical protein MXAN_7204 [Myxococcus xanthus DK 1622]
gi|108462590|gb|ABF87775.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length=251
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/137 (30%), Positives = 65/137 (48%), Gaps = 6/137 (4%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEE-RHVLFDEMLIELDIHFRIEDDLYYPALSA 59
++A +LK H + L RK +A N+ + + L D+M+ EL +H IE+ ++YPA+ +
Sbjct 41 MDAIALLKADHKTAEQLFRKFEKAGPNAHKLKRRLVDQMVTELAVHAVIEEQVFYPAVRS 100
Query 60 A----GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
G + + EH V LA L A ++ + V + AH EE D+ P
Sbjct 101 RSEELGPDVLRSLEEHHVVKWLLAELDGMSPEAERFDAKVQVLMENVRAHVLQEESDLFP 160
Query 116 APTPVHITDAELEELGD 132
A V EL +GD
Sbjct 161 ALKKV-FRPQELRTMGD 176
>gi|226953791|ref|ZP_03824255.1| hemerythrin HHE cation binding region [Acinetobacter sp. ATCC
27244]
gi|226835462|gb|EEH67845.1| hemerythrin HHE cation binding region [Acinetobacter sp. ATCC
27244]
Length=148
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 64/145 (45%), Gaps = 4/145 (2%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDD-LYYPALSA 59
+N ++ L+ H + L +K+ E +SEER LFD + EL H ED LY P +
Sbjct 1 MNIFEALRESHDKQRSLAKKLVETSGHSEERKELFDLLKNELYAHSVAEDRYLYIPLMFD 60
Query 60 AGKPITGTH--AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAP 117
G H AEH ++ + + TL T +P + + H EE
Sbjct 61 DGGLDITRHALAEHHEMDELVETLEETDMSSPSWLATAKQLSEKVHHHLKEEEHKFFQQA 120
Query 118 TPVHITDAELEELGDKMAARIEQLR 142
+ + DAE E+LG + A ++ +
Sbjct 121 GKI-LADAEKEKLGKQYLAEYKKYK 144
>gi|254788109|ref|YP_003075538.1| hemerythrin HHE cation binding region [Teredinibacter turnerae
T7901]
gi|237686957|gb|ACR14221.1| hemerythrin HHE cation binding region [Teredinibacter turnerae
T7901]
Length=148
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/123 (27%), Positives = 54/123 (44%), Gaps = 3/123 (2%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYY-PALSA 59
+N + L+ H + L + +S+ERH LF ++ EL H E+ +Y P + A
Sbjct 1 MNIFQALREDHKKQRQLANALVRTSGDSKERHELFGQLAAELKSHAIAEERHFYVPLIEA 60
Query 60 AGKPITGTH--AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAP 117
H AEH ++ + + L T +P + R ++ H D EE+D P
Sbjct 61 DETQEMARHGVAEHHEMDELMEKLESTDPSSPAWLATAKELRELIHHHLDDEEKDFFPQA 120
Query 118 TPV 120
+ V
Sbjct 121 SDV 123
>gi|167648257|ref|YP_001685920.1| hemerythrin HHE cation-binding domain-containing protein [Caulobacter
sp. K31]
gi|167350687|gb|ABZ73422.1| Hemerythrin HHE cation binding domain protein [Caulobacter sp.
K31]
Length=171
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/162 (25%), Positives = 75/162 (47%), Gaps = 3/162 (1%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA 60
++A +LK H ++ L K EA ++ L +++ +EL +H +IE+D++YPA
Sbjct 7 LDAVALLKADHRKVEDLFAKF-EAATGDGKKKALAEQICLELTVHTKIEEDIFYPACEGK 65
Query 61 GKP--ITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPT 118
+ + + EH +A + Y+ + V ++E H EE+ + +
Sbjct 66 VEEDLLKEAYVEHDGAKVLIAEIEAGGPDDEFYDAKVKVLSEMIEHHVKEEEQRVEGMFS 125
Query 119 PVHITDAELEELGDKMAARIEQLRGSPLYTLRTKGKADLLKA 160
+++ LG++MAA QL + T K +A LKA
Sbjct 126 QARKAGLDMDALGEQMAAEKAQLIAAYKKTGLPKPEASTLKA 167
>gi|115375938|ref|ZP_01463186.1| hemerythrin HHE cation binding region [Stigmatella aurantiaca
DW4/3-1]
gi|310820693|ref|YP_003953051.1| hypothetical protein STAUR_3434 [Stigmatella aurantiaca DW4/3-1]
gi|115367021|gb|EAU66008.1| hemerythrin HHE cation binding region [Stigmatella aurantiaca
DW4/3-1]
gi|309393765|gb|ADO71224.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length=217
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/139 (28%), Positives = 67/139 (49%), Gaps = 6/139 (4%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEE-RHVLFDEMLIELDIHFRIEDDLYYPALSA 59
++A +LK H ++ L RK +A N+++ + L D+++ EL +H IE+ ++YPA+ A
Sbjct 1 MDAIALLKADHKTVETLFRKFEKAGDNAKKLKRKLVDQIIRELAVHASIEEQVFYPAVRA 60
Query 60 -AGK---PITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
AG+ + EH L+ L P A ++ + V + H EE ++ P
Sbjct 61 KAGRLEPQVLEALEEHHVAKWLLSELDSLPPEAERFDAKVKVLMENIRTHVTEEEEELFP 120
Query 116 APTPVHITDAELEELGDKM 134
T EL E+ D +
Sbjct 121 QVRKA-FTPRELREMADAL 138
>gi|337762994|emb|CCB71702.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=185
Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/119 (32%), Positives = 53/119 (45%), Gaps = 7/119 (5%)
Query 2 NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYP---ALS 58
+A DVL R H ++ R +A + R F +++ L IH E+ +P +
Sbjct 9 DAVDVLTRQHAQIR---RGFYKAALPGPGRKRAFHQLMRLLSIHEAAEEAHVHPLARRVL 65
Query 59 AAGKPITGTH-AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPA 116
AG +T AE +Q L LLRT GY + R + AHA EER+ PA
Sbjct 66 RAGPAVTARRRAEEKQAKRLLTALLRTGPDGKGYVRQLGAARRAVLAHAAREEREEFPA 124
>gi|294651724|ref|ZP_06729025.1| hemerythrin [Acinetobacter haemolyticus ATCC 19194]
gi|292822390|gb|EFF81292.1| hemerythrin [Acinetobacter haemolyticus ATCC 19194]
Length=148
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/145 (29%), Positives = 64/145 (45%), Gaps = 4/145 (2%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDD-LYYPAL-S 58
+N ++ L+ H + L +K+ E +SEER LFD + EL H ED LY P +
Sbjct 1 MNIFEALRESHDKQRSLAKKLVETSGHSEERKELFDLLKNELYAHSVAEDRYLYIPLMFD 60
Query 59 AAGKPIT-GTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAP 117
G IT AEH ++ + + TL T P + + H EE
Sbjct 61 DVGLDITRHALAEHHEMDELVETLEETDMSNPSWLATAKQLSEKVHHHLKEEEHKFFQQA 120
Query 118 TPVHITDAELEELGDKMAARIEQLR 142
+ + DAE E+LG + A ++ +
Sbjct 121 GKI-LADAEKEKLGKQYLAEYKKYK 144
>gi|338531723|ref|YP_004665057.1| hypothetical protein LILAB_10340 [Myxococcus fulvus HW-1]
gi|337257819|gb|AEI63979.1| hypothetical protein LILAB_10340 [Myxococcus fulvus HW-1]
Length=211
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/137 (29%), Positives = 64/137 (47%), Gaps = 6/137 (4%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEE-RHVLFDEMLIELDIHFRIEDDLYYPALSA 59
++A +LK H ++ L RK +A N+ + + L D+++ EL +H IE+ ++YPA+ +
Sbjct 1 MDAIALLKADHKTVEQLFRKFEKAGPNAHKLKRRLVDQLVTELSVHAVIEEQVFYPAVRS 60
Query 60 A----GKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
G + EH V LA L A ++ + V + AH EE + P
Sbjct 61 RSEELGPEVLRFLEEHHVVKWLLAELDGMSPEAERFDAKVQVLMENVRAHVLQEEGQLFP 120
Query 116 APTPVHITDAELEELGD 132
A V EL +GD
Sbjct 121 ALKKV-FRPQELRTMGD 136
>gi|334111684|ref|ZP_08485953.1| Hemerythrin HHE cation binding domain protein [Methylomicrobium
album BG8]
gi|333598341|gb|EGL03168.1| Hemerythrin HHE cation binding domain protein [Methylomicrobium
album BG8]
Length=187
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/112 (28%), Positives = 57/112 (51%), Gaps = 6/112 (5%)
Query 34 LFDEMLIELDIHFRIEDDLYYPA-LSAAGKPITGTHA--EHRQVVDQLATLLRTPQRAPG 90
L + +EL IH ++E++++YPA + A G+ A EH + +Q+ ++
Sbjct 52 LVQRICMELTIHTQLEEEIFYPAAIDAIGQLDIMDEALVEHGKAKEQIDQVVSMAPEDDY 111
Query 91 YEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAARIEQLR 142
++ E NV R ++E H EE M P I +L LG+++ R ++L+
Sbjct 112 FDAEVNVLRDMVEHHVQEEEGKMFPKLKKSSI---DLAALGEELNLRKQELQ 160
>gi|56476352|ref|YP_157941.1| hypothetical protein ebA1694 [Aromatoleum aromaticum EbN1]
gi|56312395|emb|CAI07040.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=196
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/122 (29%), Positives = 59/122 (49%), Gaps = 13/122 (10%)
Query 23 EAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPAL------SAAGKPITGTHAEHRQVVD 76
E + + + L + + L+IH ++E++++YPA+ SA H E R+++
Sbjct 31 ETDTSPQTKKALVNSACLSLEIHAQLEEEIFYPAMRQAMAESATVDKSVSEHEEMRRLIT 90
Query 77 QLATLLRTPQRAPGYEEEW-NVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMA 135
QL + T P Y+E + ++ R VL HA EE M+P + L ELG +M
Sbjct 91 QLRGMEPTD---PQYDETFMSLMRDVLH-HAAEEETIMLPKAE--RLLGNRLAELGAEMM 144
Query 136 AR 137
R
Sbjct 145 KR 146
>gi|254000272|ref|YP_003052335.1| Hemerythrin HHE cation-binding domain-containing protein [Methylovorus
glucosetrophus SIP3-4]
gi|253986951|gb|ACT51808.1| Hemerythrin HHE cation binding domain protein [Methylovorus glucosetrophus
SIP3-4]
Length=191
Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (48%), Gaps = 6/116 (5%)
Query 29 EERHVLFDEMLIELDIHFRIEDDLYYPALSAA---GKPITGTHAEHRQVVDQLATLLRTP 85
E + ++ +++ +EL +H R+E++++YPA AA + EH + +
Sbjct 52 EGKTLVANQICLELTVHARVEEEIFYPAARAAIHDDDLLNEAVVEHSTAKSLIGQIQSMN 111
Query 86 QRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAARIEQL 141
P Y+ + V ++ H + EE +M P V +LEEL +++ R QL
Sbjct 112 PSDPMYDAKMTVLSEYIDHHVEEEETEMFP---KVKKAKVDLEELEAEVSKRRGQL 164
>gi|254380916|ref|ZP_04996282.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339827|gb|EDX20793.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=166
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/152 (27%), Positives = 72/152 (48%), Gaps = 8/152 (5%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSE-ERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
V+ +LK H ++ L ++ +A ++ E+ + D+++ EL H IE+ ++YPA
Sbjct 10 VDGIVLLKEDHKAVEKLFKQFEKAGEDAHAEKRKIADQVIEELTTHTWIEEKIFYPAARE 69
Query 60 AGKPITGTHA-----EHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMI 114
A P T H EH V+ L+ L ++ + +V + H + EE++
Sbjct 70 AA-PDTKDHVLESVEEHHVVLWMLSELKDLDAADERFDAKMSVLMENVRHHVEEEEKEWF 128
Query 115 PAPTPVHITDAELEELGDKMAARIEQLRGSPL 146
P V + L ELG++M A ++ G PL
Sbjct 129 PDVRKV-MGRNRLTELGEQMEAAKKRAPGEPL 159
>gi|226942199|ref|YP_002797272.1| hemerythrin HHE cation binding protein [Azotobacter vinelandii
DJ]
gi|226717126|gb|ACO76297.1| hemerythrin HHE cation binding protein [Azotobacter vinelandii
DJ]
Length=157
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/122 (30%), Positives = 60/122 (50%), Gaps = 7/122 (5%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
+NA ++LK H LK + ++G+ + R L + EL IH R+E++++YPA A
Sbjct 1 MNAIELLKHDHETLKQVFERLGKTTERGVKTRGELMRHLHEELTIHTRLEEEIFYPAFKA 60
Query 60 A-GKP----ITGTHAEHRQVVDQ-LATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDM 113
A GK EHR V L L +T + + V + ++ H + EE++M
Sbjct 61 ASGKEGDILFHEATEEHRAVEALILPDLEKTEPSSVEFAGRAKVLKDMVGHHIEEEEQEM 120
Query 114 IP 115
+P
Sbjct 121 LP 122
>gi|222053391|ref|YP_002535753.1| Hemerythrin HHE cation binding domain protein [Geobacter sp.
FRC-32]
gi|221562680|gb|ACM18652.1| Hemerythrin HHE cation binding domain protein [Geobacter sp.
FRC-32]
Length=171
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/137 (26%), Positives = 64/137 (47%), Gaps = 14/137 (10%)
Query 4 YDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKP 63
+++LK H + L +++ A + E+R F + EL HF+IE+ +YP L P
Sbjct 9 FELLKNDHRRAEQLMQQISAA--SREQRQEPFITLRNELQAHFQIEEKFFYPKLL----P 62
Query 64 ITGTHA-------EHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPA 116
I A EH++ D L L + A ++E ++ + H + EE+++ P
Sbjct 63 IQDMKALVEDALDEHQEAKDLLLQLEKIGFGAEDWQETFSKLEDGIRHHHEDEEQEIFPK 122
Query 117 PTPVHITDAELEELGDK 133
T + D +L ++ K
Sbjct 123 CTQF-LKDQDLTDMARK 138
>gi|313202231|ref|YP_004040889.1| hemerythrin hhe cation-binding domain-containing protein [Methylovorus
sp. MP688]
gi|312441547|gb|ADQ85653.1| Hemerythrin HHE cation binding domain protein [Methylovorus sp.
MP688]
Length=191
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (48%), Gaps = 6/116 (5%)
Query 29 EERHVLFDEMLIELDIHFRIEDDLYYPALSAA---GKPITGTHAEHRQVVDQLATLLRTP 85
E + ++ +++ +EL +H R+E++++YPA AA + EH + +
Sbjct 52 EGKTLVANQICLELTVHARVEEEIFYPAARAAIHDDDLLNEAVVEHSTAKSLIGQIQSMN 111
Query 86 QRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAARIEQL 141
P Y+ + V ++ H + EE +M P V +LEEL +++ R QL
Sbjct 112 PSDPMYDAKMTVLSEYIDHHVEEEETEMFP---KVKKAKVDLEELEVEVSKRRGQL 164
>gi|54310855|gb|AAV33667.1| MnbG [Comamonas sp. JS46]
Length=199
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/110 (33%), Positives = 58/110 (53%), Gaps = 12/110 (10%)
Query 34 LFDEMLIELDIHFRIEDDLYYPALSAAG-----KPITGTHAEHRQVVDQLATLLRTPQRA 88
L D + + L+IH ++E++L+YPAL + T H E R +V +L + P
Sbjct 42 LADNVCLALEIHTQLEEELFYPALRVVADNEVLRKSTPEHDEMRGLVSRLRNM---PVTD 98
Query 89 PGYEEE-WNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAAR 137
P Y++ + + R V+ AD EE ++PA + I D +L LG +MA R
Sbjct 99 PVYDDTFFELMRHVMHHVAD-EETLLLPAAERL-IPD-QLSALGARMARR 145
>gi|295681257|ref|YP_003609831.1| hemerythrin HHE cation binding domain protein [Burkholderia sp.
CCGE1002]
gi|295441152|gb|ADG20320.1| Hemerythrin HHE cation binding domain protein [Burkholderia sp.
CCGE1002]
Length=187
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/136 (26%), Positives = 57/136 (42%), Gaps = 8/136 (5%)
Query 13 VLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAA-----GKPITGT 67
+ G+ G+ E + L EL +H IE++L YPA A +
Sbjct 41 LFDAFGKSRGDERDTLEAKAALAQRACEELTMHTIIEEELLYPAAQQALPDDDKLDVDEA 100
Query 68 HAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAEL 127
+ EH V +A G++ + V ++ H + EE ++ PA + T +L
Sbjct 101 YVEHFLVKTLIAKFTTLKPGDKGFDATFKVMSELVRHHVEEEEGELFPA---LRRTGCDL 157
Query 128 EELGDKMAARIEQLRG 143
LG K+AAR E L+
Sbjct 158 AALGKKIAARKETLQA 173
>gi|116622539|ref|YP_824695.1| hemerythrin HHE cation binding domain-containing protein [Candidatus
Solibacter usitatus Ellin6076]
gi|116225701|gb|ABJ84410.1| Hemerythrin HHE cation binding domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length=196
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/164 (24%), Positives = 75/164 (46%), Gaps = 13/164 (7%)
Query 2 NAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALS--A 59
+A +LK+ H +K L + +A + ++ ++ + L EL IH +E++L+YPA+
Sbjct 10 HAIAILKKDHDTVKSLFDEFKKAEKPAAKQKIIV-QALTELKIHAILEEELFYPAVRRHV 68
Query 60 AGKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPTP 119
GK + EH +A L R+ + ++ V + H EE ++ P
Sbjct 69 GGKLMNEADEEHHVAKVLIAELDRSTIENSHRDAKFTVLSENVRHHIKEEENEVFPKARE 128
Query 120 VHITDAELEELGDKMAARIEQLRGSPLYT-------LRTKGKAD 156
+ + + E LG ++ R ++L + + T R +GK D
Sbjct 129 LKL---DFEALGQQLLKRKKELLNNGIPTDAEHAMVGRMRGKTD 169
>gi|312797491|ref|YP_004030413.1| hypothetical protein RBRH_03069 [Burkholderia rhizoxinica HKI
454]
gi|312169266|emb|CBW76269.1| Hypothetical cytosolic protein [Burkholderia rhizoxinica HKI
454]
Length=233
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/108 (30%), Positives = 53/108 (50%), Gaps = 8/108 (7%)
Query 41 ELDIHFRIEDDLYYPALSAA--GKP---ITGTHAEHRQVVDQLATLLRTPQRAPGYEEEW 95
EL +H IE+++ YPA A G+P + + EH V + L + A G++ +
Sbjct 119 ELAMHTIIEEEILYPAAQRALSGQPQKEVDEAYVEHFLVKTLMEKLRASRAGADGFDAAF 178
Query 96 NVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAARIEQLRG 143
NV ++ H EE + PA + +L+ELG ++A R QL+
Sbjct 179 NVLAENVQHHVSEEESVLFPALRKAGV---DLDELGARIAQRKAQLQA 223
>gi|162452503|ref|YP_001614870.1| hypothetical protein sce4227 [Sorangium cellulosum 'So ce 56']
gi|161163085|emb|CAN94390.1| hypothetical protein sce4227 [Sorangium cellulosum 'So ce 56']
Length=188
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/138 (26%), Positives = 63/138 (46%), Gaps = 6/138 (4%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALS-- 58
++A D+L++ H + L ++ P + R + ++ +D H RIE+ YP +
Sbjct 1 MDALDLLEQQHLEVSALMARIAAEP-SPGLRTAMVAQLSRMIDAHVRIEETYLYPVCAER 59
Query 59 AAG--KPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPA 116
AG KP+ + +H LLRT +E + R + HAD EE D++
Sbjct 60 MAGDRKPLHDAYEKHGLARFAADNLLRTRVTDVRFEARLRLLRDIFAHHADEEE-DILFP 118
Query 117 PTPVHITDAELEELGDKM 134
+TD +L+ +G +
Sbjct 119 KAKRGLTDEQLDVIGSDL 136
>gi|85708400|ref|ZP_01039466.1| Hemerythrin [Erythrobacter sp. NAP1]
gi|85689934|gb|EAQ29937.1| Hemerythrin [Erythrobacter sp. NAP1]
Length=163
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/113 (29%), Positives = 51/113 (46%), Gaps = 5/113 (4%)
Query 7 LKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKPITG 66
L+ H + L K+ + +SEER LF E+ +EL H E+ Y + A ++G
Sbjct 11 LETDHNRQRDLLDKIAKTEGDSEERRRLFTELTMELKSHAAAEEQAVYSEM-LADPEVSG 69
Query 67 ----THAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIP 115
+ AEH ++ + L L T +PG+ ++ F H EE D P
Sbjct 70 ETRHSVAEHHEIDEMLNDLAATDMSSPGWMLKFKSFDERYRHHITEEEDDHFP 122
>gi|238022040|ref|ZP_04602466.1| hypothetical protein GCWU000324_01945 [Kingella oralis ATCC 51147]
gi|237866654|gb|EEP67696.1| hypothetical protein GCWU000324_01945 [Kingella oralis ATCC 51147]
Length=122
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/108 (31%), Positives = 49/108 (46%), Gaps = 10/108 (9%)
Query 10 HHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKPITGTHA 69
HHT+ L ++ AP + + + E ++L+ HF E+ L+ P +P
Sbjct 15 HHTL--ALCLRILRAPEQNHQTDI--TEHYVDLEQHFIHEETLFAPLWDKLNRPELRQRF 70
Query 70 EHRQVVDQLATLLRTPQRAPGYEEEWNV-FRTVLEAHADVEERDMIPA 116
EH A L R + A EWN F T+L HA EER++ PA
Sbjct 71 EHDH-----AELRRLFREAQFDRAEWNTTFATLLRDHARFEERELFPA 113
>gi|260061626|ref|YP_003194706.1| hypothetical protein RB2501_08495 [Robiginitalea biformata HTCC2501]
gi|88785758|gb|EAR16927.1| hypothetical protein RB2501_08495 [Robiginitalea biformata HTCC2501]
Length=144
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/145 (22%), Positives = 67/145 (47%), Gaps = 4/145 (2%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYY-PALSA 59
+N Y+ +++ H + + L ++ E ++ R +F ++ EL +H E+ +Y P +
Sbjct 1 MNIYEAIRQDHDLQRSLLDQLLETSGDTSTRRTIFAKLKKELQVHADAEERFFYVPLIKK 60
Query 60 AGKPITGTH--AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAP 117
H AEH ++ + + L TP +PG+ + +E H EE+
Sbjct 61 DATQEMARHGVAEHHEIDELVERLEETPFDSPGWLTLCKSLQEQVEHHLADEEKQFFQVS 120
Query 118 TPVHITDAELEELGDKMAARIEQLR 142
V +T+++ L ++ + +E+ R
Sbjct 121 GKV-LTESQKTGLAEEYSTYVEKNR 144
>gi|149184280|ref|ZP_01862598.1| hypothetical protein ED21_26218 [Erythrobacter sp. SD-21]
gi|148831600|gb|EDL50033.1| hypothetical protein ED21_26218 [Erythrobacter sp. SD-21]
Length=163
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/157 (27%), Positives = 68/157 (44%), Gaps = 8/157 (5%)
Query 4 YDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKP 63
+D LK+ H + L K+ + +SEER LF+E+ EL H E+ Y + KP
Sbjct 8 FDRLKKDHDKHRELLDKLMKTSGDSEERKSLFEELTKELKSHAAAEEQALYSTM--LRKP 65
Query 64 ITGTH-----AEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMIPAPT 118
T AEH ++ + L L T G+ ++N F H D EE + P
Sbjct 66 PTTDETRHSVAEHHEIEEALNDLAATDMSEGGWLTKFNTFDHDYRHHIDEEEEEHFP-DF 124
Query 119 PVHITDAELEELGDKMAARIEQLRGSPLYTLRTKGKA 155
H+T+ ++E + R ++ + T K +A
Sbjct 125 AKHLTEEDMEHMRSVFERRKQEEKAEAEITPEKKEEA 161
>gi|146307329|ref|YP_001187794.1| hemerythrin HHE cation binding domain-containing protein [Pseudomonas
mendocina ymp]
gi|145575530|gb|ABP85062.1| Hemerythrin HHE cation binding domain protein [Pseudomonas mendocina
ymp]
Length=155
Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/153 (31%), Positives = 71/153 (47%), Gaps = 16/153 (10%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
+NA ++LK+ H +K L ++ E + + R L ++ EL IH +E+ ++YPA
Sbjct 1 MNAIELLKKDHETVKELLSRLEETTERAVQTRKKLISKIEQELKIHTALEEQIFYPAFRQ 60
Query 60 AGKPITGTHA-----EHRQVVDQLATLLRTPQRAPG---YEEEWNVFRTVLEAHADVEER 111
AG A EHR V + L Q +P + V + +LE H + EE
Sbjct 61 AGSKDDAVLAIEAKEEHRAV--EALVLPDIKQTSPSTLEFAGRVKVLKELLEHHIEEEEN 118
Query 112 DMIPAPTPVHITDAELEELGDKMAARIEQLRGS 144
DM P + + ELE+LG M E LR S
Sbjct 119 DMFPQARKL-LGKRELEDLGQAM----ETLRKS 146
>gi|334120556|ref|ZP_08494636.1| Hemerythrin HHE cation binding domain protein [Microcoleus vaginatus
FGP-2]
gi|333456534|gb|EGK85166.1| Hemerythrin HHE cation binding domain protein [Microcoleus vaginatus
FGP-2]
Length=342
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/106 (23%), Positives = 54/106 (51%), Gaps = 7/106 (6%)
Query 34 LFDEMLIELDIHFRIEDDLYYPALSA---AGKPITGTHAEHRQVVDQLATLLRTPQRAPG 90
F ++ +L +H E+ + YPA+ + + + A+ +Q++ Q+ L T +
Sbjct 228 FFGQLYKDLSVHAEAEEQIVYPAIRSYYGNTQELFDEQAQMKQMLAQIKALNPT---SSD 284
Query 91 YEEEWNVFRTVLEAHADVEERDMIPAPTPVHITDAELEELGDKMAA 136
++ + +TV++ H EE DM P H+++A++E++ + A
Sbjct 285 FKAQIKQLQTVVQDHVKEEENDMFP-QIRRHLSEAQMEQMATQFKA 329
>gi|254498194|ref|ZP_05110943.1| hemerythrin HHE cation binding domain protein [Legionella drancourtii
LLAP12]
gi|254352602|gb|EET11388.1| hemerythrin HHE cation binding domain protein [Legionella drancourtii
LLAP12]
Length=147
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/150 (23%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPA---- 56
+NA D L + H ++ ++ +E R LF+ + EL H +E ++YP
Sbjct 1 MNAIDFLIKEHNHVRETLAQISNPSHPNESREKLFNSLCHELIRHEAMEHAIWYPCFKNN 60
Query 57 --LSAAGKPITGTHAEHRQVVDQLATLLRTPQRAPGYEEEWNVFRTVLEAHADVEERDMI 114
L A + + ++QL + + +E+++ + +E HA EE+
Sbjct 61 SQLDPAVRHLLSEEKHAENAIEQLKNI----HQPHEWEKKFFQLKEEIEKHAQEEEQQFF 116
Query 115 PAPTPVHITDAELEELGDKMAARIEQLRGS 144
PA + +++ ELE++G M + GS
Sbjct 117 PAVKKL-LSNNELEQIGLDMFHFKQDYEGS 145
>gi|74318266|ref|YP_316006.1| hypothetical protein Tbd_2248 [Thiobacillus denitrificans ATCC
25259]
gi|74057761|gb|AAZ98201.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length=161
Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/153 (26%), Positives = 74/153 (49%), Gaps = 22/153 (14%)
Query 2 NAYDVLKRHHTVLK---GLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPAL 57
+A D+L H +K G ++ EA N+ E++ L +++ EL +H RIE++++YP +
Sbjct 8 DACDLLDADHKAVKKMFGEFEELTEARGNTREKKRALAEKICRELTVHTRIEEEIFYPGI 67
Query 58 SAAGKP---ITGTHAEH---RQVVDQLATLLRTPQRAPG---YEEEWNVFRTVLEAHADV 108
A + ++ EH +Q++ Q+ + PG Y+ + V ++ H
Sbjct 68 RNAIRDELMMSEAEVEHESAKQLIAQIQAM------EPGDAHYDAKVMVLGEYVDHHVKE 121
Query 109 EERDMIPAPTPVHITDAELEELGDKMAARIEQL 141
E +M P T +L ++ D + AR E+L
Sbjct 122 ERNEMFP---KARATKVDLVKMRDALQARKEEL 151
>gi|330810480|ref|YP_004354942.1| hypothetical protein PSEBR_a3596 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378588|gb|AEA69938.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length=158
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/62 (33%), Positives = 38/62 (62%), Gaps = 1/62 (1%)
Query 1 VNAYDVLKRHHTVLKGLGRKVGEAPVNS-EERHVLFDEMLIELDIHFRIEDDLYYPALSA 59
+NA D+LK H +K + ++ E+ + ++R L ++ +E+ IH R+E+++ YPA
Sbjct 1 MNAIDLLKADHERVKAILTQLSESTERAVKKRTDLLAKLEMEISIHTRLEEEILYPAFKQ 60
Query 60 AG 61
AG
Sbjct 61 AG 62
>gi|329119510|ref|ZP_08248195.1| hemerythrin HHE cation binding region protein [Neisseria bacilliformis
ATCC BAA-1200]
gi|327464443|gb|EGF10743.1| hemerythrin HHE cation binding region protein [Neisseria bacilliformis
ATCC BAA-1200]
Length=122
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/113 (32%), Positives = 51/113 (46%), Gaps = 16/113 (14%)
Query 8 KRHHTVLKGLGRKVGEAPVNSEERHVLFDEMLIELDIHFRIEDDLYYPALSAAGKPITGT 67
+ HHT+ L ++ +P + E I+L+ HF E+ ++ P A +
Sbjct 13 EHHHTL--ALCTRILRSPEADHRADI--TEHYIDLEKHFVCEETMFAPLWDALCRDDLRA 68
Query 68 H--AEHRQVVDQLATLLRTPQRAPGYEE-EWNV-FRTVLEAHADVEERDMIPA 116
AEH Q LR AP Y EWNV F T+L HA EER++ PA
Sbjct 69 RFEAEHAQ--------LRAMHLAPDYTNPEWNVQFATLLRDHARFEERELFPA 113
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131112251088
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40