BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2638

Length=148
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609775|ref|NP_217154.1|  hypothetical protein Rv2638 [Mycoba...   295    1e-78
gi|326904251|gb|EGE51184.1|  hypothetical protein TBPG_02149 [Myc...   292    1e-77
gi|254551692|ref|ZP_05142139.1|  hypothetical protein Mtube_14749...   217    5e-55
gi|41408840|ref|NP_961676.1|  hypothetical protein MAP2742 [Mycob...   189    1e-46
gi|254819005|ref|ZP_05224006.1|  hypothetical protein MintA_03716...   186    9e-46
gi|118462259|ref|YP_882700.1|  anti-anti-sigma factor [Mycobacter...   184    4e-45
gi|342858531|ref|ZP_08715186.1|  hypothetical protein MCOL_06636 ...   178    2e-43
gi|296170941|ref|ZP_06852471.1|  SpoIIAA family protein [Mycobact...   177    6e-43
gi|240172519|ref|ZP_04751178.1|  hypothetical protein MkanA1_2460...   172    1e-41
gi|183982075|ref|YP_001850366.1|  hypothetical protein MMAR_2061 ...   162    2e-38
gi|118618620|ref|YP_906952.1|  hypothetical protein MUL_3282 [Myc...   156    8e-37
gi|240172581|ref|ZP_04751240.1|  anti-anti-sigma factor [Mycobact...   148    3e-34
gi|289751265|ref|ZP_06510643.1|  conserved hypothetical protein [...   141    3e-32
gi|15841375|ref|NP_336412.1|  anti-anti-sigma factor [Mycobacteri...   139    2e-31
gi|15609041|ref|NP_216420.1|  hypothetical protein Rv1904 [Mycoba...   139    2e-31
gi|289758010|ref|ZP_06517388.1|  anti-anti-sigma factor [Mycobact...   137    7e-31
gi|31793097|ref|NP_855590.1|  hypothetical protein Mb1939 [Mycoba...   137    7e-31
gi|15608505|ref|NP_215881.1|  anti-anti-sigma factor RSFA (anti-s...   123    1e-26
gi|323719568|gb|EGB28692.1|  hypothetical protein TMMG_01164 [Myc...   122    2e-26
gi|31792561|ref|NP_855054.1|  hypothetical protein Mb1400c [Mycob...   122    2e-26
gi|289753447|ref|ZP_06512825.1|  anti-anti-sigma factor rsfA [Myc...   121    3e-26
gi|183982806|ref|YP_001851097.1|  hypothetical protein MMAR_2800 ...   121    4e-26
gi|289569379|ref|ZP_06449606.1|  anti-anti-sigma factor rsfA [Myc...   121    4e-26
gi|118618334|ref|YP_906666.1|  hypothetical protein MUL_2925 [Myc...   120    5e-26
gi|333991578|ref|YP_004524192.1|  hypothetical protein JDM601_293...   120    1e-25
gi|339294839|gb|AEJ46950.1|  hypothetical protein CCDC5079_1760 [...   114    3e-24
gi|257055169|ref|YP_003133001.1|  anti-anti-sigma factor [Sacchar...  55.5    2e-06
gi|296130596|ref|YP_003637846.1|  anti-sigma-factor antagonist [C...  54.7    5e-06
gi|254388760|ref|ZP_05003993.1|  anti-sigma factor antagonist [St...  53.5    1e-05
gi|226305069|ref|YP_002765027.1|  anti-anti-sigma factor [Rhodoco...  52.8    2e-05
gi|182437100|ref|YP_001824819.1|  putative anti-sigma factor anta...  52.4    2e-05
gi|291446574|ref|ZP_06585964.1|  BldG [Streptomyces roseosporus N...  52.0    3e-05
gi|108804526|ref|YP_644463.1|  anti-sigma-factor antagonist [Rubr...  52.0    3e-05
gi|328883366|emb|CCA56605.1|  anti-sigma F factor antagonist (spo...  52.0    3e-05
gi|288921138|ref|ZP_06415426.1|  anti-sigma-factor antagonist [Fr...  51.6    4e-05
gi|291438155|ref|ZP_06577545.1|  anti-sigma-B factor antagonist [...  51.6    4e-05
gi|290958526|ref|YP_003489708.1|  anti-anti-sigma factor BldG [St...  51.6    4e-05
gi|297201347|ref|ZP_06918744.1|  anti-sigma F factor antagonist [...  51.2    4e-05
gi|311896981|dbj|BAJ29389.1|  putative antagonist protein [Kitasa...  51.2    5e-05
gi|294630597|ref|ZP_06709157.1|  conserved hypothetical protein [...  51.2    5e-05
gi|297159262|gb|ADI08974.1|  anti-sigma-factor antagonist [Strept...  51.2    5e-05
gi|312194216|ref|YP_004014277.1|  anti-sigma-factor antagonist [F...  51.2    5e-05
gi|117929182|ref|YP_873733.1|  anti-sigma-factor antagonist [Acid...  50.4    8e-05
gi|111225908|ref|YP_716702.1|  anti-sigma-B factor antagonist [Fr...  50.1    1e-04
gi|86742977|ref|YP_483377.1|  anti-sigma-factor antagonist domain...  50.1    1e-04
gi|290955484|ref|YP_003486666.1|  anti-anti-sigma-factor [Strepto...  50.1    1e-04
gi|336180135|ref|YP_004585510.1|  anti-sigma-factor antagonist [F...  50.1    1e-04
gi|229490190|ref|ZP_04384037.1|  anti-sigma factor antagonist [Rh...  50.1    1e-04
gi|21221968|ref|NP_627747.1|  anti-sigma factor antagonist [Strep...  49.7    1e-04
gi|158312176|ref|YP_001504684.1|  anti-sigma-factor antagonist [F...  49.7    2e-04


>gi|15609775|ref|NP_217154.1| hypothetical protein Rv2638 [Mycobacterium tuberculosis H37Rv]
 gi|15842179|ref|NP_337216.1| SpoIIAA family protein [Mycobacterium tuberculosis CDC1551]
 gi|31793824|ref|NP_856317.1| hypothetical protein Mb2671 [Mycobacterium bovis AF2122/97]
 74 more sequence titles
 Length=148

 Score =  295 bits (756),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 148/148 (100%), Positives = 148/148 (100%), Gaps = 0/148 (0%)

Query  1    MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL  60
            MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL
Sbjct  1    MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL  60

Query  61   VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE  120
            VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE
Sbjct  61   VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE  120

Query  121  AGGLSRVLPIYPTVDTALGKGTAGPARC  148
            AGGLSRVLPIYPTVDTALGKGTAGPARC
Sbjct  121  AGGLSRVLPIYPTVDTALGKGTAGPARC  148


>gi|326904251|gb|EGE51184.1| hypothetical protein TBPG_02149 [Mycobacterium tuberculosis W-148]
Length=148

 Score =  292 bits (747),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 0/148 (0%)

Query  1    MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL  60
            MGLITTEPRSSPHPLS RLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL
Sbjct  1    MGLITTEPRSSPHPLSLRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL  60

Query  61   VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE  120
            VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE
Sbjct  61   VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE  120

Query  121  AGGLSRVLPIYPTVDTALGKGTAGPARC  148
            AGGLSRVLPIYPTVDTALGKGTAGPARC
Sbjct  121  AGGLSRVLPIYPTVDTALGKGTAGPARC  148


>gi|254551692|ref|ZP_05142139.1| hypothetical protein Mtube_14749 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|339295512|gb|AEJ47623.1| hypothetical protein CCDC5079_2433 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299130|gb|AEJ51240.1| hypothetical protein CCDC5180_2403 [Mycobacterium tuberculosis 
CCDC5180]
Length=108

 Score =  217 bits (552),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  41   LLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCR  100
            +LIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCR
Sbjct  1    MLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCR  60

Query  101  CRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC  148
            CRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC
Sbjct  61   CRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC  108


>gi|41408840|ref|NP_961676.1| hypothetical protein MAP2742 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|254775968|ref|ZP_05217484.1| hypothetical protein MaviaA2_15040 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|41397199|gb|AAS05059.1| hypothetical protein MAP_2742 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336458883|gb|EGO37840.1| anti-anti-sigma factor [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=145

 Score =  189 bits (479),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 95/139 (69%), Positives = 111/139 (80%), Gaps = 1/139 (0%)

Query  1    MGLITTEPRSSPH-PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQ  59
            M  +  EP S+ H  LS +LV+ELGDP+STLRATT  SG+A+LI+AGGEID  NE  WR 
Sbjct  1    MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRH  60

Query  60   LVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIA  119
            LV+EAA  VT PGP +VDVTGL+FMGCCAFA L DEA+RCR RGIDLRLVS +PIV RI 
Sbjct  61   LVSEAAGVVTTPGPFVVDVTGLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRII  120

Query  120  EAGGLSRVLPIYPTVDTAL  138
            +A GLS +LPIYPTVD+AL
Sbjct  121  DACGLSDILPIYPTVDSAL  139


>gi|254819005|ref|ZP_05224006.1| hypothetical protein MintA_03716 [Mycobacterium intracellulare 
ATCC 13950]
Length=145

 Score =  186 bits (472),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 105/124 (85%), Gaps = 0/124 (0%)

Query  15   LSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPL  74
            LS +LV+ELGDPHSTLRAT D  G A+LI+AGGEID  NEH WR LV+EAA  VTAPGP 
Sbjct  16   LSTKLVYELGDPHSTLRATADRCGPAVLIYAGGEIDACNEHTWRHLVSEAAGVVTAPGPF  75

Query  75   IVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTV  134
            +VDVTGL+FMGCCAFA LADEA+RC+ RGIDLRLVS +PIVARI +A GL  VLPIYPTV
Sbjct  76   VVDVTGLEFMGCCAFAVLADEAKRCQKRGIDLRLVSCEPIVARIIDACGLGGVLPIYPTV  135

Query  135  DTAL  138
            D+AL
Sbjct  136  DSAL  139


>gi|118462259|ref|YP_882700.1| anti-anti-sigma factor [Mycobacterium avium 104]
 gi|118163546|gb|ABK64443.1| anti-anti-sigma factor [Mycobacterium avium 104]
Length=140

 Score =  184 bits (467),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 93/133 (70%), Positives = 108/133 (82%), Gaps = 1/133 (0%)

Query  7    EPRSSPH-PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAA  65
            EP S+ H  LS +LV+ELGDP+STLRATT  SG+A+LI+AGGEID  NE  WR LV+EAA
Sbjct  2    EPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRHLVSEAA  61

Query  66   AGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLS  125
              V  PGP +VDVTGL+FMGCCAFA L DEA+RCR RGIDLRLVS +PIV RI +A GLS
Sbjct  62   GVVATPGPFVVDVTGLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRIIDACGLS  121

Query  126  RVLPIYPTVDTAL  138
             +LPIYPTVD+AL
Sbjct  122  DILPIYPTVDSAL  134


>gi|342858531|ref|ZP_08715186.1| hypothetical protein MCOL_06636 [Mycobacterium colombiense CECT 
3035]
 gi|342134235|gb|EGT87415.1| hypothetical protein MCOL_06636 [Mycobacterium colombiense CECT 
3035]
Length=145

 Score =  178 bits (451),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 90/139 (65%), Positives = 106/139 (77%), Gaps = 1/139 (0%)

Query  1    MGLITTEPRSSPH-PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQ  59
            M     E   + H  LS +LV+ELGDP+STLRAT D SGA+++I+AGGE+D  NE  W  
Sbjct  1    MNFAIVEAMPTSHLTLSTKLVYELGDPNSTLRATADRSGASVVIYAGGEVDAYNEDTWGH  60

Query  60   LVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIA  119
            LV EAA+GVTAPG  +VDVTGLDFMGCCAFA LA+EA+ CR R IDLRLVS  PIV RI 
Sbjct  61   LVREAASGVTAPGFFVVDVTGLDFMGCCAFAVLAEEAKGCRERDIDLRLVSRDPIVERIV  120

Query  120  EAGGLSRVLPIYPTVDTAL  138
            +A GL R+LPIYPTVD+AL
Sbjct  121  DACGLGRLLPIYPTVDSAL  139


>gi|296170941|ref|ZP_06852471.1| SpoIIAA family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894437|gb|EFG74182.1| SpoIIAA family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=137

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 86/127 (68%), Positives = 102/127 (81%), Gaps = 0/127 (0%)

Query  15   LSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPL  74
            LS +LV+ELGDP STLRAT D SG A+LI+AGGE+D  NEH WRQL+ E A    APGPL
Sbjct  8    LSTKLVYELGDPTSTLRATADRSGPAVLIYAGGEVDACNEHTWRQLLGEVAGVAIAPGPL  67

Query  75   IVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTV  134
            ++DVTGL+FM CCAFA LADEA+RC+ RGI+LRLVS +PIVARI +A GLS +LPIYPT 
Sbjct  68   VIDVTGLEFMACCAFAVLADEAKRCKERGIELRLVSREPIVARIVDACGLSGLLPIYPTA  127

Query  135  DTALGKG  141
            D+AL   
Sbjct  128  DSALASA  134


>gi|240172519|ref|ZP_04751178.1| hypothetical protein MkanA1_24605 [Mycobacterium kansasii ATCC 
12478]
Length=142

 Score =  172 bits (436),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 87/138 (64%), Positives = 102/138 (74%), Gaps = 0/138 (0%)

Query  1    MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL  60
            M ++T EP +    LS RLV ELGDP STLRATTD +GAA+LIHAGGE+D  NEH WRQL
Sbjct  1    MSVVTAEPITPHLMLSTRLVSELGDPRSTLRATTDRNGAAVLIHAGGEVDACNEHTWRQL  60

Query  61   VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE  120
            +TE A  V   G  +VDVTGLDFMGCCA+  LA+EA RCR RG +LRLV+ Q  VARI  
Sbjct  61   ITETATSVPGSGLFVVDVTGLDFMGCCAYTVLAEEADRCRRRGAELRLVTPQSTVARIVA  120

Query  121  AGGLSRVLPIYPTVDTAL  138
            A G S +LP+YPTV +AL
Sbjct  121  ACGFSDLLPVYPTVASAL  138


>gi|183982075|ref|YP_001850366.1| hypothetical protein MMAR_2061 [Mycobacterium marinum M]
 gi|183175401|gb|ACC40511.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=146

 Score =  162 bits (409),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 86/141 (61%), Positives = 100/141 (71%), Gaps = 3/141 (2%)

Query  1    MGLITTEPRSSPHP-LSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQ  59
            M +   EP  +PHP LS RLV ELGDPHSTLRATTD   AA+LIHAGGE+D  NEH WRQ
Sbjct  1    MSVDIAEP-FTPHPMLSIRLVRELGDPHSTLRATTDFRSAAVLIHAGGEVDAANEHTWRQ  59

Query  60   LVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVS-HQPIVARI  118
            L+ E AA   +PG  IVDV+GLDFMGCCAF  LA++A RCR RG++LR+ S     V RI
Sbjct  60   LIAETAASAPSPGLFIVDVSGLDFMGCCAFEVLAEQAGRCRARGVELRIASAAHTRVTRI  119

Query  119  AEAGGLSRVLPIYPTVDTALG  139
              A GLS  LP+Y +VD AL 
Sbjct  120  VAACGLSDALPVYRSVDAALA  140


>gi|118618620|ref|YP_906952.1| hypothetical protein MUL_3282 [Mycobacterium ulcerans Agy99]
 gi|118570730|gb|ABL05481.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=146

 Score =  156 bits (395),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 82/141 (59%), Positives = 98/141 (70%), Gaps = 3/141 (2%)

Query  1    MGLITTEPRSSPHP-LSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQ  59
            M +   EP  +PHP LS RL+ ELGDPHSTLRA TD    A+LIHAGGE+D  NEH WRQ
Sbjct  1    MSVDIAEP-FTPHPMLSIRLLRELGDPHSTLRAATDFRSTAVLIHAGGEVDAANEHTWRQ  59

Query  60   LVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVS-HQPIVARI  118
            L+ E AA   +PG  +VDV+GLDFMGCCAF  LA++A RCR RG++LR+ S     V RI
Sbjct  60   LIAETAASAPSPGLFVVDVSGLDFMGCCAFEVLAEQAGRCRARGVELRIASAAHTRVTRI  119

Query  119  AEAGGLSRVLPIYPTVDTALG  139
              A GLS  LP+Y +VD AL 
Sbjct  120  VAACGLSDALPVYRSVDAALA  140


>gi|240172581|ref|ZP_04751240.1| anti-anti-sigma factor [Mycobacterium kansasii ATCC 12478]
Length=140

 Score =  148 bits (373),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 70/130 (54%), Positives = 95/130 (74%), Gaps = 0/130 (0%)

Query  10   SSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVT  69
            +S  P S RL  +LGD  S LRA T+ +G+A+++H GG+ID  NE +W++LVT +AA   
Sbjct  8    ASSGPASTRLSLQLGDAQSGLRAVTESTGSAVVVHVGGDIDASNEAVWQRLVTRSAAIAV  67

Query  70   APGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLP  129
            APGP ++DV  L+FMG CA+A LA E+ RCR RG++LRLVS+QPIVAR   A GL R+LP
Sbjct  68   APGPFVIDVRDLEFMGSCAYAVLAQESVRCRRRGVNLRLVSNQPIVARTIAACGLRRLLP  127

Query  130  IYPTVDTALG  139
            +Y +V+ AL 
Sbjct  128  MYSSVENALA  137


>gi|289751265|ref|ZP_06510643.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691852|gb|EFD59281.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=86

 Score =  141 bits (356),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  80   GLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
            GLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG
Sbjct  18   GLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  77

Query  140  KGTAGPARC  148
            KGTAGPARC
Sbjct  78   KGTAGPARC  86


>gi|15841375|ref|NP_336412.1| anti-anti-sigma factor [Mycobacterium tuberculosis CDC1551]
 gi|254232080|ref|ZP_04925407.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|308231977|ref|ZP_07414465.2| hypothetical protein TMAG_02084 [Mycobacterium tuberculosis SUMu001]
 25 more sequence titles
 Length=144

 Score =  139 bits (350),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 66/126 (53%), Positives = 92/126 (74%), Gaps = 0/126 (0%)

Query  14   PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGP  73
            P S R   +  D HS LRA T+ +G+A+++H GG+ID  NE  W++LV+++AA   APGP
Sbjct  13   PSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGP  72

Query  74   LIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPT  133
             ++D+  LDFMG CA+A LA E+ RCR RG+++RLVS+QPIVAR   A GL R++P+Y T
Sbjct  73   FVIDIRDLDFMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYAT  132

Query  134  VDTALG  139
            V+TAL 
Sbjct  133  VETALA  138


>gi|15609041|ref|NP_216420.1| hypothetical protein Rv1904 [Mycobacterium tuberculosis H37Rv]
 gi|148661712|ref|YP_001283235.1| hypothetical protein MRA_1915 [Mycobacterium tuberculosis H37Ra]
 gi|148823116|ref|YP_001287870.1| hypothetical protein TBFG_11933 [Mycobacterium tuberculosis F11]
 38 more sequence titles
 Length=143

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 66/126 (53%), Positives = 92/126 (74%), Gaps = 0/126 (0%)

Query  14   PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGP  73
            P S R   +  D HS LRA T+ +G+A+++H GG+ID  NE  W++LV+++AA   APGP
Sbjct  12   PSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGP  71

Query  74   LIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPT  133
             ++D+  LDFMG CA+A LA E+ RCR RG+++RLVS+QPIVAR   A GL R++P+Y T
Sbjct  72   FVIDIRDLDFMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYAT  131

Query  134  VDTALG  139
            V+TAL 
Sbjct  132  VETALA  137


>gi|289758010|ref|ZP_06517388.1| anti-anti-sigma factor [Mycobacterium tuberculosis T85]
 gi|294996815|ref|ZP_06802506.1| hypothetical protein Mtub2_20513 [Mycobacterium tuberculosis 
210]
 gi|289713574|gb|EFD77586.1| anti-anti-sigma factor [Mycobacterium tuberculosis T85]
 gi|326903508|gb|EGE50441.1| hypothetical protein TBPG_01384 [Mycobacterium tuberculosis W-148]
Length=143

 Score =  137 bits (344),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 65/126 (52%), Positives = 91/126 (73%), Gaps = 0/126 (0%)

Query  14   PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGP  73
            P S R   +  D HS LRA T+ +G+A+++H GG+ID  NE  W++LV+++AA   APGP
Sbjct  12   PSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGP  71

Query  74   LIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPT  133
             ++D+  LDFMG CA+A  A E+ RCR RG+++RLVS+QPIVAR   A GL R++P+Y T
Sbjct  72   FVIDIRDLDFMGSCAYAVWAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYAT  131

Query  134  VDTALG  139
            V+TAL 
Sbjct  132  VETALA  137


>gi|31793097|ref|NP_855590.1| hypothetical protein Mb1939 [Mycobacterium bovis AF2122/97]
 gi|121637810|ref|YP_978033.1| hypothetical protein BCG_1943 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990294|ref|YP_002644981.1| hypothetical protein JTY_1927 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31618688|emb|CAD94641.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493457|emb|CAL71930.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224773407|dbj|BAH26213.1| hypothetical protein JTY_1927 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341601837|emb|CCC64511.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=143

 Score =  137 bits (344),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 65/126 (52%), Positives = 91/126 (73%), Gaps = 0/126 (0%)

Query  14   PLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGP  73
            P S R   +  D HS LRA T+ +G+A+++H GG+ID  NE  W++LV+++AA   APGP
Sbjct  12   PSSTRPSSQPSDLHSGLRAVTECTGSAVVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGP  71

Query  74   LIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPT  133
             ++D+  LDFMG CA+A LA E+ RCR RG+++RLVS+QPIVAR   A GL R++P+Y  
Sbjct  72   FVIDIRDLDFMGSCAYAVLAQESVRCRRRGVNMRLVSNQPIVARTIAACGLRRLIPLYAM  131

Query  134  VDTALG  139
            V+TAL 
Sbjct  132  VETALA  137


>gi|15608505|ref|NP_215881.1| anti-anti-sigma factor RSFA (anti-sigma factor antagonist) (regulator 
of sigma F A) [Mycobacterium tuberculosis H37Rv]
 gi|15840823|ref|NP_335860.1| anti-anti-sigma factor [Mycobacterium tuberculosis CDC1551]
 gi|148661155|ref|YP_001282678.1| anti-anti-sigma factor RsfA [Mycobacterium tuberculosis H37Ra]
 66 more sequence titles
 Length=128

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 64/112 (58%), Positives = 81/112 (73%), Gaps = 0/112 (0%)

Query  28   STLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCC  87
            + L+AT     +A++IHA GEID  NEH W+ LVT+AAA  TAP PL+V++ GLDFMGCC
Sbjct  15   NALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCC  74

Query  88   AFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
            A A LA EA+RCR RG+D+RLVS    VARI  A G   VLP++PT ++AL 
Sbjct  75   AVAVLAHEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALS  126


>gi|323719568|gb|EGB28692.1| hypothetical protein TMMG_01164 [Mycobacterium tuberculosis CDC1551A]
Length=105

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 54/99 (55%), Positives = 76/99 (77%), Gaps = 0/99 (0%)

Query  41   LLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCR  100
            +++H GG+ID  NE  W++LV+++AA   APGP ++D+  LDFMG CA+A LA E+ RCR
Sbjct  1    MVVHVGGDIDASNEVAWQRLVSKSAAIAIAPGPFVIDIRDLDFMGSCAYAVLAQESVRCR  60

Query  101  CRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
             RG+++RLVS+QPIVAR   A GL R++P+Y TV+TAL 
Sbjct  61   RRGVNMRLVSNQPIVARTIAACGLRRLIPLYATVETALA  99


>gi|31792561|ref|NP_855054.1| hypothetical protein Mb1400c [Mycobacterium bovis AF2122/97]
 gi|121637296|ref|YP_977519.1| hypothetical protein BCG_1427c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224989770|ref|YP_002644457.1| hypothetical protein JTY_1401 [Mycobacterium bovis BCG str. Tokyo 
172]
 8 more sequence titles
 Length=128

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 63/112 (57%), Positives = 81/112 (73%), Gaps = 0/112 (0%)

Query  28   STLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCC  87
            + L+AT     +A++IHA GEID  NEH W+ LVT+AAA  TAP PL+V++ GLDFMGCC
Sbjct  15   NALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCC  74

Query  88   AFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
            A A LA +A+RCR RG+D+RLVS    VARI  A G   VLP++PT ++AL 
Sbjct  75   AVAVLAHKAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALS  126


>gi|289753447|ref|ZP_06512825.1| anti-anti-sigma factor rsfA [Mycobacterium tuberculosis EAS054]
 gi|289694034|gb|EFD61463.1| anti-anti-sigma factor rsfA [Mycobacterium tuberculosis EAS054]
Length=128

 Score =  121 bits (304),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 63/112 (57%), Positives = 80/112 (72%), Gaps = 0/112 (0%)

Query  28   STLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCC  87
            + L+AT     +A++IHA GEID  NEH W+ LVT+AAA  TAP PL+V++ GLDFMGCC
Sbjct  15   NALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCC  74

Query  88   AFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
              A LA EA+RCR RG+D+RLVS    VARI  A G   VLP++PT ++AL 
Sbjct  75   TVAVLAHEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALS  126


>gi|183982806|ref|YP_001851097.1| hypothetical protein MMAR_2800 [Mycobacterium marinum M]
 gi|183176132|gb|ACC41242.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=146

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 62/115 (54%), Positives = 88/115 (77%), Gaps = 0/115 (0%)

Query  24   GDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDF  83
            GDPH+ LRA T+ +G+A+++H GG++D  NE +W++LV  +AA   APGP ++D+  LDF
Sbjct  25   GDPHTGLRAVTECTGSAVVVHVGGDVDASNEVVWQRLVNRSAAIAIAPGPFVIDIRDLDF  84

Query  84   MGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
            +G CA+A LA E+ RCR RG++LRLVS+QPIVAR   A GL R+LP+Y +V+ AL
Sbjct  85   IGSCAYAVLAQESVRCRRRGVNLRLVSNQPIVARTIAACGLRRLLPMYSSVEAAL  139


>gi|289569379|ref|ZP_06449606.1| anti-anti-sigma factor rsfA [Mycobacterium tuberculosis T17]
 gi|289543133|gb|EFD46781.1| anti-anti-sigma factor rsfA [Mycobacterium tuberculosis T17]
Length=129

 Score =  121 bits (303),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 63/109 (58%), Positives = 79/109 (73%), Gaps = 0/109 (0%)

Query  31   RATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFA  90
            +AT     +A++IHA GEID  NEH W+ LVT+AAA  TAP PL+V++ GLDFMGCCA A
Sbjct  19   KATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCCAVA  78

Query  91   ALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
             LA EA+RCR RG+D+RLVS    VARI  A G   VLP++PT ++AL 
Sbjct  79   VLAHEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALS  127


>gi|118618334|ref|YP_906666.1| hypothetical protein MUL_2925 [Mycobacterium ulcerans Agy99]
 gi|118570444|gb|ABL05195.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=143

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 62/115 (54%), Positives = 88/115 (77%), Gaps = 0/115 (0%)

Query  24   GDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDF  83
            GDPH+ LRA T+ +G+A+++H GG++D  NE +W++LV  +AA   APGP ++D+  LDF
Sbjct  22   GDPHTGLRAVTECTGSAVVVHVGGDVDASNEVVWQRLVNRSAAIAIAPGPFVIDIRDLDF  81

Query  84   MGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
            +G CA+A LA E+ RCR RG++LRLVS+QPIVAR   A GL R+LP+Y +V+ AL
Sbjct  82   IGSCAYAVLAQESVRCRRRGVNLRLVSNQPIVARTIAACGLRRLLPMYSSVEAAL  136


>gi|333991578|ref|YP_004524192.1| hypothetical protein JDM601_2938 [Mycobacterium sp. JDM601]
 gi|333487546|gb|AEF36938.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=164

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 68/149 (46%), Positives = 86/149 (58%), Gaps = 4/149 (2%)

Query  2    GLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLV  61
            G ITT+    P  L   L      P   LR   + SG AL++ A G +D  N  +WR+LV
Sbjct  13   GAITTD-TGLPVRLGEALTSVAASPDMELRVVLERSGPALVVAASGSVDASNVEVWRRLV  71

Query  62   TEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEA  121
             EAAA    PGPL++D +GL+FMG CAFA L +E+ RCR RG+ LRLVS QP+V R+  A
Sbjct  72   NEAAAVTHGPGPLVIDSSGLEFMGICAFAVLVEESARCRRRGVSLRLVSSQPLVGRVVNA  131

Query  122  GGLSRVLPIYPTVDTALG---KGTAGPAR  147
             GL   L    T+D ALG   +   GP R
Sbjct  132  AGLHSELAFCVTIDEALGDTPREDPGPVR  160


>gi|339294839|gb|AEJ46950.1| hypothetical protein CCDC5079_1760 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298464|gb|AEJ50574.1| hypothetical protein CCDC5180_1737 [Mycobacterium tuberculosis 
CCDC5180]
Length=101

 Score =  114 bits (286),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 52/94 (56%), Positives = 71/94 (76%), Gaps = 0/94 (0%)

Query  46   GGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGID  105
            GG+ID  NE  W++LV+++AA   APGP ++D+  LDFMG CA+A  A E+ RCR RG++
Sbjct  2    GGDIDASNEVAWQRLVSKSAAIAIAPGPFVIDIRDLDFMGSCAYAVWAQESVRCRRRGVN  61

Query  106  LRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
            +RLVS+QPIVAR   A GL R++P+Y TV+TAL 
Sbjct  62   MRLVSNQPIVARTIAACGLRRLIPLYATVETALA  95


>gi|257055169|ref|YP_003133001.1| anti-anti-sigma factor [Saccharomonospora viridis DSM 43017]
 gi|256585041|gb|ACU96174.1| anti-anti-sigma factor [Saccharomonospora viridis DSM 43017]
Length=151

 Score = 55.5 bits (132),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 44/121 (37%), Positives = 61/121 (51%), Gaps = 1/121 (0%)

Query  20   VHELGDPHSTLRATTDGSGAA-LLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDV  78
            V EL  P+S L  TT+  G   +++   GEID        + +  A   V+ P  LIVD+
Sbjct  8    VSELAIPNSLLGLTTECYGETGVVVTVSGEIDLSTRDELAEYLNRALETVSPPQSLIVDL  67

Query  79   TGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
            + + F+G    A L D       RG+ LR+V  Q  V R  EA GLS +LP++ TV  AL
Sbjct  68   SEVTFLGSAGLALLLDTQDAAVRRGVPLRVVGTQRAVRRPIEAVGLSDMLPLHTTVQEAL  127

Query  139  G  139
             
Sbjct  128  A  128


>gi|296130596|ref|YP_003637846.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022411|gb|ADG75647.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
Length=111

 Score = 54.7 bits (130),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 39/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEA-AAGVTAPGPLIVDVTGLDFMGCCA  88
            +R TT+  GA  ++H GGEID  +    R+ V    AAG T    L+VD+TG+ FM    
Sbjct  3    VRVTTEDVGARTVVHVGGEIDVASADRLRERVAHLLAAGRT---DLLVDLTGVTFMDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R  G  L LV     + ++    GL+ V  I+ T+D AL
Sbjct  60   LGLLVGTLKRVRLAGGRLDLVVDSERLLKVFRITGLTEVFTIHETLDAAL  109


>gi|254388760|ref|ZP_05003993.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 
27064]
 gi|294813372|ref|ZP_06772015.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC 
27064]
 gi|326441799|ref|ZP_08216533.1| anti-sigma-factor antagonist [Streptomyces clavuligerus ATCC 
27064]
 gi|60687275|gb|AAX35717.1| BldG [Streptomyces clavuligerus ATCC 27064]
 gi|197702480|gb|EDY48292.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 
27064]
 gi|294325971|gb|EFG07614.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC 
27064]
Length=117

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 38/115 (34%), Positives = 54/115 (47%), Gaps = 4/115 (3%)

Query  25   DPHSTLRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDF  83
            D   + R  T  +G   ++  GGEID      L  QLV     G      L+VD+ G+DF
Sbjct  2    DLSLSTRNVTGPAGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SYHLVVDMEGVDF  58

Query  84   MGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
            +       L    +R R     LRLV +Q  + +I    GL++V PI+ TVD A+
Sbjct  59   LDSTGLGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTTVDEAV  113


>gi|226305069|ref|YP_002765027.1| anti-anti-sigma factor [Rhodococcus erythropolis PR4]
 gi|226184184|dbj|BAH32288.1| putative anti-anti-sigma factor [Rhodococcus erythropolis PR4]
Length=199

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 34/98 (35%), Positives = 53/98 (55%), Gaps = 4/98 (4%)

Query  42   LIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRC  101
            +IH  GEID  + + +R  +T     V A   L+VD++ L+FMG C  + L+  + R R 
Sbjct  97   VIHVRGEIDLMSANAFRDFLTYH---VAADRTLVVDLSELEFMGTCGLSVLSVLSTRSRD  153

Query  102  RGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
             G  L LV  +P V R+ +A G   +   Y ++D A+G
Sbjct  154  VGGTLALVCARP-VQRLLKAAGQESMFACYESLDHAIG  190


>gi|182437100|ref|YP_001824819.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. 
griseus NBRC 13350]
 gi|178465616|dbj|BAG20136.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. 
griseus NBRC 13350]
Length=117

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 39/114 (35%), Positives = 54/114 (48%), Gaps = 5/114 (4%)

Query  26   PHSTLRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFM  84
            P ST R  +   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+
Sbjct  4    PLST-RNVSGPGGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SYHLVVDMEGVDFL  59

Query  85   GCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
                   L    +R R     LRLV +Q  + +I    GL++V PI+ TVD A+
Sbjct  60   DSTGLGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTTVDEAV  113


>gi|291446574|ref|ZP_06585964.1| BldG [Streptomyces roseosporus NRRL 15998]
 gi|297193028|ref|ZP_06910426.1| anti-sigma-B factor antagonist [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|326777715|ref|ZP_08236980.1| anti-sigma-factor antagonist [Streptomyces cf. griseus XylebKG-1]
 6 more sequence titles
 Length=117

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 35/102 (35%), Positives = 49/102 (49%), Gaps = 4/102 (3%)

Query  38   GAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEA  96
            G   ++  GGEID      L  QLV     G      L+VD+ G+DF+       L    
Sbjct  15   GDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SYHLVVDMEGVDFLDSTGLGVLVGGL  71

Query  97   QRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
            +R R     LRLV +Q  + +I    GL++V PI+ TVD A+
Sbjct  72   KRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTTVDEAV  113


>gi|108804526|ref|YP_644463.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941]
 gi|108765769|gb|ABG04651.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941]
Length=125

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 34/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query  42   LIHAGGEIDGRNEHLWRQLVTEA--AAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRC  99
            ++   GE++    H +R+ + EA  +AG + P  ++VD++ L+FM     +AL    +  
Sbjct  20   VVKVSGELELLTAHRFREALEEATASAGDSRPRTVVVDMSNLEFMDSSGVSALLAGTRGF  79

Query  100  RCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG--KGTA  143
               G  +RLV     V R     GL R+ PIYP V +A    KG A
Sbjct  80   TGGGGRVRLVVRDSPVRRTLRVTGLDRIFPIYPDVRSATNGDKGAA  125


>gi|328883366|emb|CCA56605.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor 
antagonist RsbV [Streptomyces venezuelae ATCC 10712]
Length=117

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 36/116 (32%), Positives = 53/116 (46%), Gaps = 4/116 (3%)

Query  25   DPHSTLRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDF  83
            D   + R  +   G   ++  GGEID      L  QLV     G      L+VD+ G+DF
Sbjct  2    DLSLSTRNVSGAGGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SYHLVVDMEGVDF  58

Query  84   MGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
            +       L    +R R     LRLV +Q  + +I    GL++V PI+ +VD A+ 
Sbjct  59   LDSTGLGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVDEAVN  114


>gi|288921138|ref|ZP_06415426.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
 gi|288347447|gb|EFC81736.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
Length=113

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 53/110 (49%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  TT   G   ++  GGEID      L  QL+   +AG      L+VD+ G++F+    
Sbjct  3    LSLTTRQEGTHTVVVVGGEIDVYTAPKLREQLIDLVSAG---SYHLVVDMEGVEFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV  Q  + +I    GL++V PI+ +V+ AL
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCTQERILKIFRITGLTKVFPIHSSVEDAL  109


>gi|291438155|ref|ZP_06577545.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC 
14672]
 gi|302553081|ref|ZP_07305423.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes 
DSM 40736]
 gi|302559335|ref|ZP_07311677.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces 
griseoflavus Tu4000]
 gi|291341050|gb|EFE68006.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC 
14672]
 gi|302470699|gb|EFL33792.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes 
DSM 40736]
 gi|302476953|gb|EFL40046.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces 
griseoflavus Tu4000]
Length=113

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 53/110 (49%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T+  G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTETMGDRTIVRVGGEIDVYTAPKLREQLVELVNDG---SFHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +V+ A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVEEAV  109


>gi|290958526|ref|YP_003489708.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22]
 gi|329939418|ref|ZP_08288754.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045]
 gi|260648052|emb|CBG71160.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22]
 gi|329301647|gb|EGG45541.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045]
Length=113

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SFHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +VD A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVDEAV  109


>gi|297201347|ref|ZP_06918744.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197712790|gb|EDY56824.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
Length=113

 Score = 51.2 bits (121),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 53/110 (49%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T+  G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTETVGDRTIVRVGGEIDVYTAPKLREQLVELVNDG---SFHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +V+ A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVEEAV  109


>gi|311896981|dbj|BAJ29389.1| putative antagonist protein [Kitasatospora setae KM-6054]
Length=113

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---NYHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +VD A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHNSVDEAV  109


>gi|294630597|ref|ZP_06709157.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292833930|gb|EFF92279.1| conserved hypothetical protein [Streptomyces sp. e14]
Length=113

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---NFHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +VD A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVDEAV  109


>gi|297159262|gb|ADI08974.1| anti-sigma-factor antagonist [Streptomyces bingchenggensis BCW-1]
Length=113

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---NYHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +VD A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVDDAV  109


>gi|312194216|ref|YP_004014277.1| anti-sigma-factor antagonist [Frankia sp. EuI1c]
 gi|311225552|gb|ADP78407.1| anti-sigma-factor antagonist [Frankia sp. EuI1c]
Length=113

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 36/110 (33%), Positives = 53/110 (49%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  TT   G   ++  GGEID      L  QL+   +AG      L+VD+ G++F+    
Sbjct  3    LSLTTRQEGDHTVVVVGGEIDVYTAPKLREQLIDLVSAG---SYHLVVDMEGVEFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV  Q  + +I    GL++V PI+ +V+ AL
Sbjct  60   LGVLVGGLKRVRAHDGSLRLVCTQERILKIFRITGLTKVFPIHASVEEAL  109


>gi|117929182|ref|YP_873733.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
 gi|117649645|gb|ABK53747.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
Length=113

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++   GEID      L  QL+   +AGV     +IVD+  ++F+    
Sbjct  3    LTLSTRTEGDRTVVSVSGEIDVYTAPKLREQLIDLVSAGVY---HIIVDMENVEFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV  Q  + +I    GL++V PIY +V+ AL
Sbjct  60   LGVLVGGLKRVRAHDGSLRLVCTQERILKIFRITGLTKVFPIYSSVEEAL  109


>gi|111225908|ref|YP_716702.1| anti-sigma-B factor antagonist [Frankia alni ACN14a]
 gi|111153440|emb|CAJ65197.1| Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Frankia 
alni ACN14a]
Length=113

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/109 (30%), Positives = 52/109 (48%), Gaps = 2/109 (1%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAF  89
            L  TT   G   ++  GGEID       R+ + +  +G      L+VD+ G++F+     
Sbjct  3    LSLTTRQEGNHTVVVVGGEIDVYTAPKLREQLIDLVSG--GSYHLVVDMEGVEFLDSTGL  60

Query  90   AALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
              L    +R R     LRLV  Q  + +I    GL++V PI+ +++ AL
Sbjct  61   GVLVGGLKRVRAHEGSLRLVCTQERILKIFRITGLTKVFPIHSSIEEAL  109


>gi|86742977|ref|YP_483377.1| anti-sigma-factor antagonist domain-containing protein [Frankia 
sp. CcI3]
 gi|86569839|gb|ABD13648.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp. 
CcI3]
Length=113

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/109 (30%), Positives = 52/109 (48%), Gaps = 2/109 (1%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAF  89
            L  TT   G   ++  GGEID       R+ + +  +G      L+VD+ G++F+     
Sbjct  3    LSLTTRQEGNHTVVVVGGEIDVYTAPKLREQLIDLVSG--GSYHLVVDMEGVEFLDSTGL  60

Query  90   AALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
              L    +R R     LRLV  Q  + +I    GL++V PI+ +++ AL
Sbjct  61   GVLVGGLKRVRAHEGSLRLVCTQERILKIFRITGLTKVFPIHSSIEEAL  109


>gi|290955484|ref|YP_003486666.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22]
 gi|260645010|emb|CBG68096.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22]
Length=127

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 36/115 (32%), Positives = 56/115 (49%), Gaps = 6/115 (5%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGP-LIVDVTGLDFMGCCA  88
            LR  TD     L +H  GEID        +++    A  + PG  +++D+  ++F  C  
Sbjct  13   LRVRTDRGRTVLELH--GEIDIAA---AVEIIPHLDAATSGPGARIVIDLRHVEFFDCSG  67

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTA  143
               L    QR   R  +LRLV   P+  R+ +  GL+R+LP  PT++ AL +  A
Sbjct  68   LRLLYRARQRVLDRDGELRLVCTHPLTLRVLKVTGLARLLPPAPTLEAALAQPEA  122


>gi|336180135|ref|YP_004585510.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata]
 gi|334861115|gb|AEH11589.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata]
Length=113

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 33/109 (31%), Positives = 52/109 (48%), Gaps = 2/109 (1%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAF  89
            L  TT   G   ++  GGEID       R+ + +  +G      L+VD+ G++F+     
Sbjct  3    LSLTTRTEGDFTIVVVGGEIDVYTAPKLREQLIDLVSG--GSYHLVVDMEGVEFLDSTGL  60

Query  90   AALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
              L    +R R     LRLV  Q  + +I    GL++V PI+ +V+ AL
Sbjct  61   GVLVGGLKRVRAHEGTLRLVCTQERILKIFRITGLTKVFPIHASVEEAL  109


>gi|229490190|ref|ZP_04384037.1| anti-sigma factor antagonist [Rhodococcus erythropolis SK121]
 gi|229322938|gb|EEN88712.1| anti-sigma factor antagonist [Rhodococcus erythropolis SK121]
Length=103

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 33/98 (34%), Positives = 52/98 (54%), Gaps = 4/98 (4%)

Query  42   LIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRC  101
            +I   GEID  + + +R  +T     V A   L+VD++ L+FMG C  + L+  + R R 
Sbjct  1    MIKVRGEIDLMSANAFRDFLT---YHVAADRTLVVDLSELEFMGTCGLSVLSVLSTRSRD  57

Query  102  RGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALG  139
             G  L LV  +P V R+ +A G   +   Y ++D A+G
Sbjct  58   VGGTLALVCARP-VQRLLKAAGQESMFACYESLDHAIG  94


>gi|21221968|ref|NP_627747.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|289770839|ref|ZP_06530217.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24]
 gi|7227941|sp|Q9WVX8.1|RSBV_STRCO RecName: Full=Anti-sigma-B factor antagonist; AltName: Full=Anti-anti-sigma-B 
factor
 gi|4835880|gb|AAD30281.1|AF134889_1 putative anti-anti-sigma factor BldG [Streptomyces coelicolor]
 gi|4539567|emb|CAB38486.1| putative anti-sigma factor antagonist [Streptomyces coelicolor 
A3(2)]
 gi|289701038|gb|EFD68467.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24]
Length=113

 Score = 49.7 bits (117),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  +T   G   ++  GGEID      L  QLV     G      L+VD+ G+DF+    
Sbjct  3    LSLSTRTVGDRTVVEVGGEIDVYTAPKLREQLVELVNDG---SFHLVVDMEGVDFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     LRLV +Q  + +I    GL++V PI+ +V+ A+
Sbjct  60   LGVLVGGLKRVRAHEGSLRLVCNQERILKIFRITGLTKVFPIHTSVEEAV  109


>gi|158312176|ref|YP_001504684.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
 gi|158107581|gb|ABW09778.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
Length=113

 Score = 49.7 bits (117),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 35/110 (32%), Positives = 52/110 (48%), Gaps = 4/110 (3%)

Query  30   LRATTDGSGAALLIHAGGEIDGRNE-HLWRQLVTEAAAGVTAPGPLIVDVTGLDFMGCCA  88
            L  TT   G   ++  GGEID      L  QL+   +AG      L+VD+ G++F+    
Sbjct  3    LSLTTRQEGTHTVVVVGGEIDVYTAPKLREQLIDLVSAG---SYHLVVDMEGVEFLDSTG  59

Query  89   FAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTAL  138
               L    +R R     L LV  Q  + +I    GL++V PI+ +V+ AL
Sbjct  60   LGVLVGGLKRVRAHEGSLHLVCTQERILKIFRITGLTKVFPIHSSVEEAL  109



Lambda     K      H
   0.321    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130586878330


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40