BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2645 Length=143 Score E Sequences producing significant alignments: (Bits) Value gi|15609782|ref|NP_217161.1| hypothetical protein Rv2645 [Mycoba... 288 1e-76 gi|253798271|ref|YP_003031272.1| hypothetical protein TBMG_01326... 286 5e-76 gi|289570820|ref|ZP_06451047.1| hypothetical protein TBJG_04234 ... 242 1e-62 gi|294994260|ref|ZP_06799951.1| hypothetical protein Mtub2_07028... 222 1e-56 gi|294994259|ref|ZP_06799950.1| hypothetical protein Mtub2_07023... 50.1 1e-04 gi|260061028|ref|YP_003194108.1| putative protease [Robiginitale... 40.4 0.095 gi|76817327|ref|YP_337302.1| pyochelin synthetase [Burkholderia ... 38.1 0.44 gi|226194902|ref|ZP_03790493.1| phenyloxazoline synthase MbtB (M... 38.1 0.45 gi|167921930|ref|ZP_02509021.1| pyochelin synthetase [Burkholder... 38.1 0.46 gi|254265420|ref|ZP_04956285.1| putative siderophore non-ribosom... 38.1 0.47 gi|167897357|ref|ZP_02484759.1| pyochelin synthetase [Burkholder... 35.4 3.2 gi|126456052|ref|YP_001074824.1| putative siderophore non-riboso... 35.4 3.2 gi|323456224|gb|EGB12091.1| hypothetical protein AURANDRAFT_7074... 35.0 3.4 gi|344309273|ref|XP_003423301.1| PREDICTED: patr class I histoco... 35.0 3.9 gi|126445160|ref|YP_001061877.1| putative siderophore non-riboso... 34.7 5.3 gi|134279373|ref|ZP_01766086.1| putative siderophore non-ribosom... 34.3 7.0 >gi|15609782|ref|NP_217161.1| hypothetical protein Rv2645 [Mycobacterium tuberculosis H37Rv] gi|15842186|ref|NP_337223.1| hypothetical protein MT2723 [Mycobacterium tuberculosis CDC1551] gi|148662486|ref|YP_001284009.1| hypothetical protein MRA_2674 [Mycobacterium tuberculosis H37Ra] 49 more sequence titlesLength=143 Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%) Query 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV Sbjct 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 Query 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE Sbjct 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 Query 121 LLNAADTLDDGRRQLDDLGEHRR 143 LLNAADTLDDGRRQLDDLGEHRR Sbjct 121 LLNAADTLDDGRRQLDDLGEHRR 143 >gi|253798271|ref|YP_003031272.1| hypothetical protein TBMG_01326 [Mycobacterium tuberculosis KZN 1435] gi|289553566|ref|ZP_06442776.1| hypothetical protein TBXG_01316 [Mycobacterium tuberculosis KZN 605] gi|297635257|ref|ZP_06953037.1| hypothetical protein MtubK4_14095 [Mycobacterium tuberculosis KZN 4207] gi|297732253|ref|ZP_06961371.1| hypothetical protein MtubKR_14244 [Mycobacterium tuberculosis KZN R506] gi|313659586|ref|ZP_07816466.1| hypothetical protein MtubKV_14249 [Mycobacterium tuberculosis KZN V2475] gi|253319774|gb|ACT24377.1| hypothetical protein TBMG_01326 [Mycobacterium tuberculosis KZN 1435] gi|289438198|gb|EFD20691.1| hypothetical protein TBXG_01316 [Mycobacterium tuberculosis KZN 605] gi|328458043|gb|AEB03466.1| hypothetical protein TBSG_01337 [Mycobacterium tuberculosis KZN 4207] Length=143 Score = 286 bits (733), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/143 (99%), Positives = 142/143 (99%), Gaps = 0/143 (0%) Query 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 M TTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV Sbjct 1 MATTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 Query 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE Sbjct 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 Query 121 LLNAADTLDDGRRQLDDLGEHRR 143 LLNAADTLDDGRRQLDDLGEHRR Sbjct 121 LLNAADTLDDGRRQLDDLGEHRR 143 >gi|289570820|ref|ZP_06451047.1| hypothetical protein TBJG_04234 [Mycobacterium tuberculosis T17] gi|289544574|gb|EFD48222.1| hypothetical protein TBJG_04234 [Mycobacterium tuberculosis T17] Length=141 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 134/143 (94%), Positives = 135/143 (95%), Gaps = 2/143 (1%) Query 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 MTT P P+ DTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV Sbjct 1 MTTRPDNPVL--RPDTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 58 Query 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE Sbjct 59 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 118 Query 121 LLNAADTLDDGRRQLDDLGEHRR 143 LLNAADTLDDGRRQLDDLGEHRR Sbjct 119 LLNAADTLDDGRRQLDDLGEHRR 141 >gi|294994260|ref|ZP_06799951.1| hypothetical protein Mtub2_07028 [Mycobacterium tuberculosis 210] Length=134 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 112/125 (90%), Positives = 115/125 (92%), Gaps = 3/125 (2%) Query 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV Sbjct 1 MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGV 60 Query 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAE 120 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPV G +A RR A Sbjct 61 TICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVWG---SARRRPAGW 117 Query 121 LLNAA 125 L+ + Sbjct 118 PLSCS 122 >gi|294994259|ref|ZP_06799950.1| hypothetical protein Mtub2_07023 [Mycobacterium tuberculosis 210] Length=37 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/37 (98%), Positives = 37/37 (100%), Gaps = 0/37 (0%) Query 107 LGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEHRR 143 +GIGPAAARRLAAELLNAADTLDDGRRQLDDLGEHRR Sbjct 1 MGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEHRR 37 >gi|260061028|ref|YP_003194108.1| putative protease [Robiginitalea biformata HTCC2501] gi|88785160|gb|EAR16329.1| putative protease [Robiginitalea biformata HTCC2501] Length=447 Score = 40.4 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 34/103 (34%), Positives = 45/103 (44%), Gaps = 16/103 (15%) Query 37 PPPPWCEPGTEPIWEQLTERYGGVTI---CQWTRYFPAGDPVA-ADVWIAADDRVVDGRV 92 PP PW E ++P W++L GGVT+ W Y G A D +IAAD + DG Sbjct 89 PPKPW-EFRSKPAWQRLIIMLGGVTVNFLVAWVIYI--GTSFAYGDAYIAADS-IEDG-- 142 Query 93 LRTQPAIHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRRQL 135 H T P +L +G +L A DD RR + Sbjct 143 ------YHVTNPVLLELGVQTGDKLVAIDGQRYAKYDDLRRNM 179 >gi|76817327|ref|YP_337302.1| pyochelin synthetase [Burkholderia pseudomallei 1710b] gi|76581800|gb|ABA51274.1| pyochelin synthetase [Burkholderia pseudomallei 1710b] Length=2084 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 39/128 (31%), Positives = 56/128 (44%), Gaps = 7/128 (5%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 502 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 561 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRR 133 D ++A R+ +P + +EPPV P A R LAA A D Sbjct 562 MFDAYVALLARLASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATV 621 Query 134 QLDDLGEH 141 +D G H Sbjct 622 VIDAAGAH 629 >gi|226194902|ref|ZP_03790493.1| phenyloxazoline synthase MbtB (Mycobactin synthetaseprotein B) [Burkholderia pseudomallei Pakistan 9] gi|225932707|gb|EEH28703.1| phenyloxazoline synthase MbtB (Mycobactin synthetaseprotein B) [Burkholderia pseudomallei Pakistan 9] Length=1942 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 39/128 (31%), Positives = 56/128 (44%), Gaps = 7/128 (5%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 419 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 478 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRR 133 D ++A R+ +P + +EPPV P A R LAA A D Sbjct 479 MFDAYVALLARLASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATV 538 Query 134 QLDDLGEH 141 +D G H Sbjct 539 VIDAAGAH 546 >gi|167921930|ref|ZP_02509021.1| pyochelin synthetase [Burkholderia pseudomallei BCC215] Length=1944 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 39/128 (31%), Positives = 56/128 (44%), Gaps = 7/128 (5%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 419 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 478 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRR 133 D ++A R+ +P + +EPPV P A R LAA A D Sbjct 479 MFDAYVALLARLASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATV 538 Query 134 QLDDLGEH 141 +D G H Sbjct 539 VIDAAGAH 546 >gi|254265420|ref|ZP_04956285.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1710a] gi|254216422|gb|EET05807.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1710a] Length=2001 Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust. Identities = 39/128 (31%), Positives = 56/128 (44%), Gaps = 7/128 (5%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 419 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 478 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRR 133 D ++A R+ +P + +EPPV P A R LAA A D Sbjct 479 MFDAYVALLARLASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATV 538 Query 134 QLDDLGEH 141 +D G H Sbjct 539 VIDAAGAH 546 >gi|167897357|ref|ZP_02484759.1| pyochelin synthetase [Burkholderia pseudomallei 7894] Length=256 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/106 (33%), Positives = 50/106 (48%), Gaps = 7/106 (6%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 144 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 203 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAA 119 D ++A R+ +P + +EPPV P A R LAA Sbjct 204 MFDAYVALLARLASDAAWWARPGDIVLPSEPPVACAHPDADRHLAA 249 >gi|126456052|ref|YP_001074824.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1106a] gi|242312422|ref|ZP_04811439.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1106b] gi|126229820|gb|ABN93233.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1106a] gi|242135661|gb|EES22064.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 1106b] Length=2023 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 38/128 (30%), Positives = 55/128 (43%), Gaps = 7/128 (5%) Query 21 GRCACGQQLADVGPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVA 76 G + G+ L + G PP + T +W Q+T+++GG+ I R FPAG P A Sbjct 419 GIGSVGRLLGEHGARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAA 478 Query 77 A-DVWIAADDRVVDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRR 133 D ++A R+ +P + + PPV P A R LAA A D Sbjct 479 MFDAYVALLARLASDAAWWARPGDIVLPSGPPVACAHPDADRHLAAGFAAQARRTPDATV 538 Query 134 QLDDLGEH 141 +D G H Sbjct 539 VIDAAGAH 546 >gi|323456224|gb|EGB12091.1| hypothetical protein AURANDRAFT_70749 [Aureococcus anophagefferens] Length=859 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/115 (28%), Positives = 41/115 (36%), Gaps = 26/115 (22%) Query 13 HADTNGDPGRCACGQQLADVG------------PATPP-----------PPWCEPGTEPI 49 + DT G P CA G+ L + G PA+ P W P E + Sbjct 165 YFDTGGFPISCADGRTLYNGGFYLRMPEDEVARPASGAARQVGEKKRALPDWYLPLYEKL 224 Query 50 WEQLTERYGGVTICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEP 104 W + GG + W G VW DRVV+GRV+ A H P Sbjct 225 WSHVN---GGELVRLWRAMAEHGKVTQHAVWEFCADRVVNGRVVIIGDAAHMASP 276 >gi|344309273|ref|XP_003423301.1| PREDICTED: patr class I histocompatibility antigen, A-126 alpha chain-like [Loxodonta africana] Length=439 Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 34/74 (46%), Gaps = 7/74 (9%) Query 35 ATPPPPWCEPGTEPIWEQLTERYGGVT----ICQWTR--YFPAGDPVAADV-WIAADDRV 87 A P PW E + WE+LT R GV + WT Y+ D + + W++A + Sbjct 67 AEPRTPWAEQDEQEHWEELTRRAKGVAQDLRVDLWTLRGYYNQSDSGSHTIQWLSACEVR 126 Query 88 VDGRVLRTQPAIHY 101 DGR LR I Y Sbjct 127 SDGRFLRGYRRIAY 140 >gi|126445160|ref|YP_001061877.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 668] gi|126224651|gb|ABN88156.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 668] Length=2090 Score = 34.7 bits (78), Expect = 5.3, Method: Compositional matrix adjust. Identities = 36/116 (32%), Positives = 50/116 (44%), Gaps = 7/116 (6%) Query 33 GPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVAA-DVWIAADDRV 87 G PP + T +W Q+T+++GG+ I R FPAG P A D ++A R+ Sbjct 434 GARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAAMFDAYVALLARL 493 Query 88 VDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEH 141 +P + +EPPV P A R LAA A D +D G H Sbjct 494 ASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATVAIDAAGAH 549 >gi|134279373|ref|ZP_01766086.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 305] gi|134249792|gb|EBA49873.1| putative siderophore non-ribosomal peptide synthase [Burkholderia pseudomallei 305] Length=1981 Score = 34.3 bits (77), Expect = 7.0, Method: Compositional matrix adjust. Identities = 36/116 (32%), Positives = 50/116 (44%), Gaps = 7/116 (6%) Query 33 GPATPPPPWCEPGTEPIWE--QLTERYGGVTICQWTR--YFPAGDPVAA-DVWIAADDRV 87 G PP + T +W Q+T+++GG+ I R FPAG P A D ++A R+ Sbjct 434 GARAAPPCYMISQTPQVWLDCQVTDQFGGLEIGWDVRDDLFPAGMPAAMFDAYVALLARL 493 Query 88 VDGRVLRTQPA--IHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEH 141 +P + +EPPV P A R LAA A D +D G H Sbjct 494 ASDAAWWARPGDIVLPSEPPVACAHPDADRHLAAGFAAQARRTPDATVVIDAAGAH 549 Lambda K H 0.320 0.139 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129250525032 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40