BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2655c Length=475 Score E Sequences producing significant alignments: (Bits) Value gi|15609792|ref|NP_217171.1| phiRv2 prophage protein [Mycobacter... 956 0.0 gi|298526127|ref|ZP_07013536.1| conserved hypothetical protein [... 955 0.0 gi|289444196|ref|ZP_06433940.1| phi phage protein [Mycobacterium... 955 0.0 gi|306780838|ref|ZP_07419175.1| phiRv2 phage protein [Mycobacter... 954 0.0 gi|306798558|ref|ZP_07436860.1| phiRv2 phage protein [Mycobacter... 951 0.0 gi|306973050|ref|ZP_07485711.1| phiRv2 phage protein [Mycobacter... 937 0.0 gi|289751306|ref|ZP_06510684.1| phiRv2 phage protein [Mycobacter... 922 0.0 gi|254551709|ref|ZP_05142156.1| phiRv2 phage protein [Mycobacter... 843 0.0 gi|308375524|ref|ZP_07668050.1| hypothetical protein TMGG_02215 ... 788 0.0 gi|120402460|ref|YP_952289.1| hypothetical protein Mvan_1450 [My... 450 3e-124 gi|302545970|ref|ZP_07298312.1| conserved hypothetical protein [... 348 1e-93 gi|294013146|ref|YP_003546606.1| hypothetical protein SJA_C1-316... 345 1e-92 gi|302559043|ref|ZP_07311385.1| conserved hypothetical protein [... 337 3e-90 gi|302553093|ref|ZP_07305435.1| phiRv2 prophage protein [Strepto... 335 8e-90 gi|318060885|ref|ZP_07979606.1| hypothetical protein SSA3_23273 ... 333 3e-89 gi|318075928|ref|ZP_07983260.1| hypothetical protein SSA3_04255 ... 332 1e-88 gi|328882522|emb|CCA55761.1| DNA primase [Streptomyces venezuela... 330 2e-88 gi|333024417|ref|ZP_08452481.1| hypothetical protein STTU_1921 [... 328 1e-87 gi|182436699|ref|YP_001824418.1| hypothetical protein SGR_2906 [... 327 2e-87 gi|294628970|ref|ZP_06707530.1| conserved hypothetical protein [... 314 2e-83 gi|329936168|ref|ZP_08285961.1| hypothetical protein SGM_1453 [S... 312 8e-83 gi|291453088|ref|ZP_06592478.1| phiRv2 prophage protein [Strepto... 310 3e-82 gi|300782286|ref|YP_003762577.1| hypothetical protein AMED_0353 ... 271 2e-70 gi|300787998|ref|YP_003768289.1| hypothetical protein AMED_6150 ... 270 3e-70 gi|340529575|gb|AEK44780.1| hypothetical protein RAM_31525 [Amyc... 270 4e-70 gi|190404502|ref|YP_001965266.1| replication initiator protein [... 270 4e-70 gi|337767911|emb|CCB76624.1| conserved protein of unknown functi... 253 7e-65 gi|328884987|emb|CCA58226.1| DNA primase [Streptomyces venezuela... 250 4e-64 gi|283455542|ref|YP_003360106.1| phiRv2 prophage protein [Bifido... 250 4e-64 gi|171741078|ref|ZP_02916885.1| hypothetical protein BIFDEN_0014... 249 6e-64 gi|291447434|ref|ZP_06586824.1| conserved hypothetical protein [... 248 1e-63 gi|239990425|ref|ZP_04711089.1| phiRv2 prophage protein [Strepto... 248 1e-63 gi|254776192|ref|ZP_05217708.1| hypothetical protein MaviaA2_161... 248 1e-63 gi|340626059|ref|YP_004744511.1| putative prophage protein [Myco... 246 5e-63 gi|297192328|ref|ZP_06909726.1| phiRv2 prophage protein [Strepto... 246 8e-63 gi|291452949|ref|ZP_06592339.1| conserved hypothetical protein [... 241 2e-61 gi|300790587|ref|YP_003770878.1| hypothetical protein AMED_8783 ... 241 3e-61 gi|284028384|ref|YP_003378315.1| hypothetical protein Kfla_0392 ... 240 4e-61 gi|284031275|ref|YP_003381206.1| hypothetical protein Kfla_3347 ... 239 1e-60 gi|290959276|ref|YP_003490458.1| hypothetical protein SCAB_48621... 237 4e-60 gi|300781948|ref|YP_003762239.1| hypothetical protein AMED_0012 ... 234 3e-59 gi|318057335|ref|ZP_07976058.1| hypothetical protein SSA3_05311 ... 234 3e-59 gi|291446417|ref|ZP_06585807.1| conserved hypothetical protein [... 234 4e-59 gi|239989406|ref|ZP_04710070.1| putative phiRv2 prophage protein... 233 4e-59 gi|302520277|ref|ZP_07272619.1| phiRv2 prophage protein [Strepto... 233 7e-59 gi|333025992|ref|ZP_08454056.1| putative phiRv2 prophage protein... 233 8e-59 gi|345000664|ref|YP_004803518.1| putative phiRv2 prophage protei... 229 1e-57 gi|134103455|ref|YP_001109116.1| phiRv2 prophage protein [Saccha... 227 3e-57 gi|256374331|ref|YP_003097991.1| hypothetical protein Amir_0174 ... 225 1e-56 gi|294630759|ref|ZP_06709319.1| conserved hypothetical protein [... 224 2e-56 >gi|15609792|ref|NP_217171.1| phiRv2 prophage protein [Mycobacterium tuberculosis H37Rv] gi|15842195|ref|NP_337232.1| hypothetical protein MT2732 [Mycobacterium tuberculosis CDC1551] gi|148662497|ref|YP_001284020.1| putative phiRv2 prophage protein [Mycobacterium tuberculosis H37Ra] 38 more sequence titles Length=475 Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/475 (100%), Positives = 475/475 (100%), Gaps = 0/475 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 >gi|298526127|ref|ZP_07013536.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298495921|gb|EFI31215.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=475 Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/475 (99%), Positives = 475/475 (100%), Gaps = 0/475 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPP+GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPLGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 >gi|289444196|ref|ZP_06433940.1| phi phage protein [Mycobacterium tuberculosis T46] gi|289570829|ref|ZP_06451056.1| phiRv2 phage protein [Mycobacterium tuberculosis T17] gi|289417115|gb|EFD14355.1| phi phage protein [Mycobacterium tuberculosis T46] gi|289544583|gb|EFD48231.1| phiRv2 phage protein [Mycobacterium tuberculosis T17] Length=475 Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/475 (99%), Positives = 475/475 (100%), Gaps = 0/475 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLP+AGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPQAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 >gi|306780838|ref|ZP_07419175.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu002] gi|306785462|ref|ZP_07423784.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu003] gi|306790060|ref|ZP_07428382.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu004] 9 more sequence titles Length=475 Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/475 (99%), Positives = 474/475 (99%), Gaps = 0/475 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINA HRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINASHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 >gi|306798558|ref|ZP_07436860.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu006] gi|308341175|gb|EFP30026.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu006] Length=475 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/475 (99%), Positives = 473/475 (99%), Gaps = 0/475 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINA HRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINASHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGG PPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGVPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR 475 >gi|306973050|ref|ZP_07485711.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu010] gi|308357547|gb|EFP46398.1| phiRv2 phage protein [Mycobacterium tuberculosis SUMu010] Length=464 Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/464 (100%), Positives = 464/464 (100%), Gaps = 0/464 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRG 464 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRG Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRG 464 >gi|289751306|ref|ZP_06510684.1| phiRv2 phage protein [Mycobacterium tuberculosis T92] gi|289691893|gb|EFD59322.1| phiRv2 phage protein [Mycobacterium tuberculosis T92] Length=468 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/458 (99%), Positives = 458/458 (100%), Gaps = 0/458 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLP+AGD Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPQAGD 420 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGK 458 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGK Sbjct 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGK 458 >gi|254551709|ref|ZP_05142156.1| phiRv2 phage protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=465 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/455 (94%), Positives = 427/455 (94%), Gaps = 3/455 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGD 420 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVS A + P Sbjct 361 KGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSRVAIRDAPAQPMHRS---PGGER 417 Query 421 LPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKA 455 L N HPNGDAPLCSGPGCPNKLLSTEAKA Sbjct 418 LAVRAAGANEHPNGDAPLCSGPGCPNKLLSTEAKA 452 >gi|308375524|ref|ZP_07668050.1| hypothetical protein TMGG_02215 [Mycobacterium tuberculosis SUMu007] gi|308346036|gb|EFP34887.1| hypothetical protein TMGG_02215 [Mycobacterium tuberculosis SUMu007] Length=564 Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/390 (99%), Positives = 389/390 (99%), Gaps = 0/390 (0%) Query 1 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 60 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC Sbjct 12 MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHC 71 Query 61 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 120 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT Sbjct 72 WFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPT 131 Query 121 VLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 180 VLYDECDTLFGPKAKEHEEIRGVINA HRKGAVAGRCVIRGKIVETEELPAYCAVALAGL Sbjct 132 VLYDECDTLFGPKAKEHEEIRGVINASHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL 191 Query 181 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 240 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA Sbjct 192 DDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPA 251 Query 241 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 300 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV Sbjct 252 MPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRV 311 Query 301 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 360 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY Sbjct 312 FSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPY 371 Query 361 KGYSRTQFEDAWSRYLSADDETPEERDLSV 390 KGYSRTQFEDAWSRYLSADDETPEERDLSV Sbjct 372 KGYSRTQFEDAWSRYLSADDETPEERDLSV 401 >gi|120402460|ref|YP_952289.1| hypothetical protein Mvan_1450 [Mycobacterium vanbaalenii PYR-1] gi|119955278|gb|ABM12283.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=443 Score = 450 bits (1157), Expect = 3e-124, Method: Compositional matrix adjust. Identities = 250/392 (64%), Positives = 295/392 (76%), Gaps = 7/392 (1%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA +L + FL RFV YPS+H L+AH LWI HCWFM+AW+STPRIAFLSPEPGSGKSRA Sbjct 22 GATVLQALATFLARFVAYPSNHALVAHVLWIVHCWFMDAWESTPRIAFLSPEPGSGKSRA 81 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LEVTEPLVPRPVHA+N TPAYLFR+V+D GRPT+LYDE DT+FGPKAK++E+IRG++NA Sbjct 82 LEVTEPLVPRPVHAVNTTPAYLFRKVSDEAGRPTILYDEIDTVFGPKAKDNEDIRGMLNA 141 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHRKGA AGRCVIRGK VETEELPAYCAVALAGLDDLPDTIM+R++VVRMRRRAP E +E Sbjct 142 GHRKGATAGRCVIRGKNVETEELPAYCAVALAGLDDLPDTIMTRAVVVRMRRRAPDEHIE 201 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPLESG--WPAMPDGVTDRRADVWESLVAVADTAG 264 PWR RVNG EAEKL + LA WA ++ +G WP +P VTDR ADVWE+L+AVAD AG Sbjct 202 PWRLRVNGGEAEKLRNWLAAWAVSVADRLTGDFWPDIPAEVTDRDADVWEALLAVADLAG 261 Query 265 GHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFS--DRDRMRTSDILTGLNRMEEG 322 G WP+ AR A A++ PS+GVLLLRDIR V S + D M T +L LN M+E Sbjct 262 GDWPERARVAAVALVAASKQRAPSVGVLLLRDIRTVLSKANGDGMATEHLLAELNEMDES 321 Query 323 PWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRYLSADDET 382 PW +IRRG+P+D+RGLA RL +YGI K QH G+ +GY+R QFEDAW RYL Sbjct 322 PWSTIRRGEPIDSRGLAQRLNKYGISSK-QHV-GDRGVRGYTRAQFEDAWKRYLPP-PVG 378 Query 383 PEERDLSVSAVSAVSPPVGDPGDATGATDATD 414 P+ S + +A P V D DA G A D Sbjct 379 PDVSATSATGATATGPDVADVADAAGPIGALD 410 >gi|302545970|ref|ZP_07298312.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463588|gb|EFL26681.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=417 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 185/359 (52%), Positives = 238/359 (67%), Gaps = 13/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LLD + AF RRF +PS+ +A LW AH ++A+DSTPR+AFLSPEPGSGKSRA Sbjct 13 GAALLDQVEAFHRRFNAFPSEAAYVAVVLWDAHAHLLDAFDSTPRLAFLSPEPGSGKSRA 72 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+ E LVP P+ A+N + A LFR V+ GRPT+L+DE DT+FGPKA ++E++RG +NA Sbjct 73 LEIVETLVPHPMVAVNASAAALFRAVSGMDGRPTILFDEIDTVFGPKAGDNEDLRGFLNA 132 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHR+ V RCV G + P+YCAVA+AGL LPDTI++RS+++RMRRRAP EPVE Sbjct 133 GHRRSGVTYRCVGDGANQSVQAFPSYCAVAMAGLGSLPDTILTRSVIIRMRRRAPNEPVE 192 Query 207 PWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTAGG 265 P+R R + + L D+LA WA ++ +E WPAMPDGVTDR ADVWE L+A+AD AGG Sbjct 193 PFRQRTHEKQGHALRDQLAQWANSVRRSVEGTWPAMPDGVTDRPADVWEPLLAIADAAGG 252 Query 266 HWPKTARAT-AETDATANRGAKPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRMEEGP 323 WP+ ARA E A K S+G+ LL D+R VF DRM T+ IL LN +E+ P Sbjct 253 AWPERARAACVELVTAAKEDDKASLGIRLLTDLRDAVFCGADRMPTAVILECLNGIEDAP 312 Query 324 WGSIRRGDPLDARGLATRLGRYGIGPK-------FQHSGGEPPYKGYSRTQFEDAWSRY 375 WG + G PL +RGL+ LG Y G + + G P +GY DAW+RY Sbjct 313 WGDM-GGKPLTSRGLSRMLGEYVTGNNKPIKPRPIRTAAGVP--RGYYAEDLADAWTRY 368 >gi|294013146|ref|YP_003546606.1| hypothetical protein SJA_C1-31600 [Sphingobium japonicum UT26S] gi|292676476|dbj|BAI97994.1| hypothetical protein SJA_C1-31600 [Sphingobium japonicum UT26S] Length=406 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 187/354 (53%), Positives = 234/354 (67%), Gaps = 7/354 (1%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 A LL+ I AF RRF+ YPSDH +H LWIAH MEAW STPR+A LSPEPGSGKSR Sbjct 15 AAGLLNRIHAFTRRFICYPSDHASTSHVLWIAHTHLMEAWFSTPRLAVLSPEPGSGKSRV 74 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+T LVP P+ ++N + AY+ +V+D RPT+LYDE DT+FGP A+ +E++RG++NA Sbjct 75 LEITAMLVPNPLLSVNSSAAYILWKVSDQANRPTILYDEIDTIFGPAARGNEDLRGMVNA 134 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 G+R+GAV GRC V+ EL Y AVA+ GL +LPDTIMSRSI++RMR+RA E E Sbjct 135 GYRRGAVVGRCNTERGKVQPVELATYAAVAMGGLGNLPDTIMSRSIIIRMRKRAAGEKAE 194 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPL-ESGWPAMPDGVTDRRADVWESLVAVADTAGG 265 P++PR++ +AE L LA WAA+I L E PAMPD + DR ADVW L AVAD AGG Sbjct 195 PFQPRIHELQAEALRIELAEWAASIAGLAEMAQPAMPDCIADRNADVWGPLFAVADLAGG 254 Query 266 HWPKTARATAETDA--TANRGAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRMEEGP 323 WP+ R A TDA +A +PS+G LL DI F + DR+ T D+L L +E P Sbjct 255 TWPEAVR-MAATDAVLSAKASERPSLGAQLLADIHACFGNADRITTVDLLDRLLDDDEAP 313 Query 324 WGSIRRGDPLDARGLATRLGRYGI-GPKFQHSGGEPPYKGYSRTQFEDAWSRYL 376 WG + RG +DAR LA L YGI + G+ P KGY R F DAW RYL Sbjct 314 WGDL-RGRKIDARKLAEMLREYGIRSSTIRMPNGQTP-KGYKREAFHDAWKRYL 365 >gi|302559043|ref|ZP_07311385.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476661|gb|EFL39754.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length=419 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 182/359 (51%), Positives = 233/359 (65%), Gaps = 12/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LLD++ AF RRF V+P+ +A LW AH ++A+DST R+AFLSPEPGSGKSRA Sbjct 14 GAALLDEVEAFHRRFNVFPTQAAYVAVALWDAHAHLLDAFDSTARLAFLSPEPGSGKSRA 73 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+ E LVP+P+ A+N +PA LFR V+ GRPT+L+DE DT+FGPKA E+EE+RG +NA Sbjct 74 LEIVETLVPQPMVAVNASPAALFRAVSGTEGRPTILFDEIDTVFGPKAGENEELRGFLNA 133 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHR+ V RCV G + P+YCAVA+AGL LPDTI++RS+++RMRRRAP E V+ Sbjct 134 GHRRSGVTYRCVGDGSNQSVQPFPSYCAVAVAGLGSLPDTILTRSVIIRMRRRAPNEKVQ 193 Query 207 PWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTAGG 265 P+R R++ E L DRLA+WA + PL WP MP+GVTDR ADVWE L+AVAD AGG Sbjct 194 PYRQRIHEKEGHALRDRLAHWADQVREPLTGAWPEMPEGVTDRPADVWEPLLAVADAAGG 253 Query 266 HWPKTARATA-ETDATANRGAKPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRMEEGP 323 WP ARA E A + + S+G+ LL D+R VF DRM T+ I+ L M++ P Sbjct 254 DWPGRARAACLELVTAAAQDDESSLGIRLLTDLRDTVFCGIDRMPTAAIIECLTAMDDAP 313 Query 324 WGSIRRGDPLDARGLATRLGRYGIGPK-------FQHSGGEPPYKGYSRTQFEDAWSRY 375 W + G PL RGL L Y + GG P +GY DAW+RY Sbjct 314 WVDM-GGKPLTPRGLGRLLSGYMTSANRPVKARPIRTPGGTVP-RGYYAEDLADAWARY 370 >gi|302553093|ref|ZP_07305435.1| phiRv2 prophage protein [Streptomyces viridochromogenes DSM 40736] gi|302470711|gb|EFL33804.1| phiRv2 prophage protein [Streptomyces viridochromogenes DSM 40736] Length=428 Score = 335 bits (860), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 180/358 (51%), Positives = 241/358 (68%), Gaps = 10/358 (2%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LL+++ AF RRF V+P++ +A TLW AH ++A++STPR+AFLSPEPGSGK+RA Sbjct 57 GAALLNEVEAFHRRFNVFPTEAAYVAVTLWDAHAHLLDAFESTPRLAFLSPEPGSGKTRA 116 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPV-GRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 LE+ LVP+P+ A+N +PA LFR V+ GRPT+L+DE DT+FGPKAK++EE+RG++N Sbjct 117 LEICGTLVPQPMVAVNASPAALFRAVSGMEDGRPTILFDEIDTVFGPKAKDNEELRGLLN 176 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGHR+ V+ RCV G + P+Y AVA+AGL LPDTI++RS+++RMRRRAP E V Sbjct 177 AGHRRTGVSYRCVGDGGNQSVQAFPSYAAVAVAGLGWLPDTILTRSVIIRMRRRAPNETV 236 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTAG 264 E +R R++ P+ L +LA WA + + ++ +P MP+GV+DR ADVWE L+A+AD AG Sbjct 237 ESFRSRIHEPQGRALRQQLAVWADTVRDQVQDAFPEMPEGVSDRPADVWEPLLAIADAAG 296 Query 265 GHWPKTAR-ATAETDATANRGAKPSIGVLLLRDIRR-VFSDRDRMRTSDILTGLNRMEEG 322 G WP+ AR A AE A A G K S+G+ LL D+R VF+ DRM T+ IL LN ++E Sbjct 297 GDWPERAREACAELVAAATVGDKASLGIRLLTDLRDVVFNGADRMPTAQILAALNALDEA 356 Query 323 PWGSIRRGDPLDARGLATRLGRYGIGPKF-----QHSGGEPPYKGYSRTQFEDAWSRY 375 PW + G PLD+R LA RLG Y G KGY DAW RY Sbjct 357 PWADM-GGKPLDSRQLAKRLGEYVTADNTPIKARNIRTGAGVVKGYYAADLHDAWKRY 413 >gi|318060885|ref|ZP_07979606.1| hypothetical protein SSA3_23273 [Streptomyces sp. SA3_actG] Length=382 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 181/357 (51%), Positives = 228/357 (64%), Gaps = 9/357 (2%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELL+++ F RRF V+P + +A LW AH ++ +DSTPR+AFLSPEPGSGK+RA Sbjct 8 GAELLNEVEQFHRRFNVFPQEAAYVAVALWDAHAHLLDCFDSTPRLAFLSPEPGSGKTRA 67 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+ E LVP+P+ A+N + A LFR V+ G+PT+L+DE DT+FGPKA ++EE+RG +NA Sbjct 68 LEIAETLVPQPMTAVNASAAALFRSVSSGEGKPTILFDEIDTVFGPKAGDNEELRGFLNA 127 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHR+ V RC+ G P+YCAVA+AGL LPDTI+SRS+++RMRRRA E VE Sbjct 128 GHRRTGVTYRCIGDGGQQSVVAFPSYCAVAVAGLGSLPDTILSRSVIIRMRRRARNEHVE 187 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPLESG-WPAMPDGVTDRRADVWESLVAVADTAGG 265 P+R RV+ E KL DRLA WA + G WP MP+ VTDR ADVWE L+AVAD AGG Sbjct 188 PFRARVHEAEGHKLRDRLATWAEHARGIVMGAWPEMPEDVTDRPADVWEPLLAVADAAGG 247 Query 266 HWPKTARATAETDATANRGA-KPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRMEEGP 323 WP+ ARA T TA+R K SIGV LL D+R V + DR+ T IL LN M++ P Sbjct 248 DWPERARAACVTLVTASRANDKGSIGVRLLTDLRDHVMTGIDRLPTVAILDRLNSMDDAP 307 Query 324 WGSIRRGDPLDARGLATRLGRYGIG-----PKFQHSGGEPPYKGYSRTQFEDAWSRY 375 W + G PLD R L+ L Y G KGY DAW RY Sbjct 308 WADL-NGKPLDNRRLSKMLAEYMSADNEPITSRNIKTGASVLKGYYAADLHDAWQRY 363 >gi|318075928|ref|ZP_07983260.1| hypothetical protein SSA3_04255 [Streptomyces sp. SA3_actF] Length=412 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 181/357 (51%), Positives = 228/357 (64%), Gaps = 9/357 (2%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELL+++ F RRF V+P + +A LW AH ++ +DSTPR+AFLSPEPGSGK+RA Sbjct 8 GAELLNEVEQFHRRFNVFPQEAAYVAVALWDAHAHLLDCFDSTPRLAFLSPEPGSGKTRA 67 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+ E LVP+P+ A+N + A LFR V+ G+PT+L+DE DT+FGPKA ++EE+RG +NA Sbjct 68 LEIAETLVPQPMTAVNASAAALFRSVSSGEGKPTILFDEIDTVFGPKAGDNEELRGFLNA 127 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHR+ V RC+ G P+YCAVA+AGL LPDTI+SRS+++RMRRRA E VE Sbjct 128 GHRRTGVTYRCIGDGGQQSVVAFPSYCAVAVAGLGSLPDTILSRSVIIRMRRRARNEHVE 187 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPLESG-WPAMPDGVTDRRADVWESLVAVADTAGG 265 P+R RV+ E KL DRLA WA + G WP MP+ VTDR ADVWE L+AVAD AGG Sbjct 188 PFRARVHEAEGHKLRDRLATWAEHARGIVMGAWPEMPEDVTDRPADVWEPLLAVADAAGG 247 Query 266 HWPKTARATAETDATANRGA-KPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRMEEGP 323 WP+ ARA T TA+R K SIGV LL D+R V + DR+ T IL LN M++ P Sbjct 248 DWPERARAACVTLVTASRANDKGSIGVRLLTDLRDHVMTGIDRLPTVAILDRLNSMDDAP 307 Query 324 WGSIRRGDPLDARGLATRLGRYGIG-----PKFQHSGGEPPYKGYSRTQFEDAWSRY 375 W + G PLD R L+ L Y G KGY DAW RY Sbjct 308 WADL-NGKPLDNRRLSKMLAEYMSADNEPITSRNIKTGASVLKGYYAADLHDAWQRY 363 >gi|328882522|emb|CCA55761.1| DNA primase [Streptomyces venezuelae ATCC 10712] Length=397 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 184/361 (51%), Positives = 232/361 (65%), Gaps = 11/361 (3%) Query 24 PPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGK 83 P GA LL ++ AF RRF V+P + +A LW AH ++A+DSTPR+AFLSPEPGSGK Sbjct 5 PIDGAALLAEVEAFHRRFNVFPREAVYVAVALWDAHAHLLDAFDSTPRLAFLSPEPGSGK 64 Query 84 SRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGV 143 SRALEV E LVPRP+ A+N A LFR V+DP GRPT+L+DE DT+FGPKA ++EE+RG Sbjct 65 SRALEVVETLVPRPMLAVNARAAALFRSVSDPAGRPTILFDEIDTVFGPKAGDNEELRGF 124 Query 144 INAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTE 203 +NAGHR+ V RC+ G E P+Y AVA+AGL LPDTI +RS+++RMRRRA E Sbjct 125 LNAGHRRSGVTYRCIGDGGNQTVVEFPSYTAVAVAGLGGLPDTITTRSVIIRMRRRARNE 184 Query 204 PVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG-WPAMPDGVTDRRADVWESLVAVADT 262 VEP+R R++ E L DRLA WA + +G WP MP+GVTDR ADVWE L++VAD Sbjct 185 HVEPFRARLHEAEGNALRDRLAEWADQVREDIAGRWPEMPEGVTDRPADVWEPLLSVADA 244 Query 263 AGGHWPKTARATAETDATANRG-AKPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRME 320 AGG WP+ ARA A R K SIG+ LL D+R V DR+ T +L L ++ Sbjct 245 AGGDWPERARAACVELVNAARADDKGSIGIRLLTDLRDHVMVGIDRLPTVAVLDRLCSLD 304 Query 321 EGPWGSIRRGDPLDARGLATRLGRYG------IGPKFQHSGGEPPYKGYSRTQFEDAWSR 374 E PW + G PLD+RGLA LG Y + + + G KGY +DAW R Sbjct 305 EAPWADM-AGRPLDSRGLAKMLGEYMTSDNTPVKARNIKTAGS-VLKGYYAADLQDAWDR 362 Query 375 Y 375 Y Sbjct 363 Y 363 >gi|333024417|ref|ZP_08452481.1| hypothetical protein STTU_1921 [Streptomyces sp. Tu6071] gi|332744269|gb|EGJ74710.1| hypothetical protein STTU_1921 [Streptomyces sp. Tu6071] Length=428 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 181/362 (50%), Positives = 232/362 (65%), Gaps = 13/362 (3%) Query 24 PPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGK 83 P GAELL+++ F RRF V+P D A LW AH ++A+DSTPR+AFLSPEPGSGK Sbjct 46 PIDGAELLNEVEQFHRRFNVFPHDDAYAAVALWDAHAHLLDAFDSTPRLAFLSPEPGSGK 105 Query 84 SRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGV 143 SRALE+ E LVP+P+ A+N + A LFR V+ GRPT+L+DE DT+FGPKA E+EE+RG Sbjct 106 SRALEIVETLVPQPMVAVNASAAALFRAVSSGEGRPTILFDEIDTIFGPKAGENEELRGF 165 Query 144 INAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTE 203 +NAGHR+ V RC+ G P+YC VA+AG+ LPDTI++RSIV+RMRRRA E Sbjct 166 LNAGHRRTGVTYRCIGDGGQQSVVAFPSYCGVAVAGIGTLPDTILTRSIVIRMRRRARNE 225 Query 204 PVEPWRPRVNGPEAEKLHDRLANWAAAIN-PLESGWPAMPDGVTDRRADVWESLVAVADT 262 VEP+R R++ E L DRLA WA ++ + WP MP+GVTDR ADVWE L+AVAD Sbjct 226 HVEPFRARLHEREGNALRDRLAQWAEQVHGQITEAWPEMPEGVTDRPADVWEPLLAVADA 285 Query 263 AGGHWPKTARATAETDATANRGA-KPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRME 320 AGG WP+ ARA T A + K S+G+ LL D+R V D++ T IL LN +E Sbjct 286 AGGDWPQRARAACLTLVRAAQDTDKHSLGIRLLTDLRDHVLIGVDKLPTIAILDRLNALE 345 Query 321 EGPWGSIRRGDPLDARGLATRLGRYGIGP-------KFQHSGGEPPYKGYSRTQFEDAWS 373 + PW + G PLD R L+ LG Y + +GG KG+ T DAW+ Sbjct 346 DAPWADL-DGKPLDNRRLSRLLGEYMTSANEPVRSRNIRTAGGV--LKGFHATDLHDAWT 402 Query 374 RY 375 RY Sbjct 403 RY 404 >gi|182436699|ref|YP_001824418.1| hypothetical protein SGR_2906 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465215|dbj|BAG19735.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length=387 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 185/369 (51%), Positives = 242/369 (66%), Gaps = 12/369 (3%) Query 17 DEDGQPMPPV-GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFL 75 + D QP + GA LLD + AF RRF +P++ +A LW AH ++ +DSTPR+AFL Sbjct 2 NTDQQPKTLIDGAALLDAVEAFHRRFNAFPTEAAYVAVALWDAHTHLLDCFDSTPRLAFL 61 Query 76 SPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAK 135 SPEPGSGK+RALEV LVP P+HA+N +PA LFR VAD GRPT+L+DE DT+FGPKAK Sbjct 62 SPEPGSGKTRALEVISTLVPHPMHAVNASPAALFRAVADEAGRPTILFDEIDTVFGPKAK 121 Query 136 EHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVR 195 ++E++RG++NAGHRK V+ RCV G P+YCAVA+ GL LPDTI++RS+++R Sbjct 122 DNEDLRGLLNAGHRKSGVSYRCVGDGGTQTVVAFPSYCAVAMGGLGSLPDTILARSVIIR 181 Query 196 MRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINP-LESGWPAMPDGVTDRRADVWE 254 MRRRA E VEP+R R++ P+ L D+L WA + P ++ +P MP+G+TDR ADVWE Sbjct 182 MRRRARNERVEPFRARIHEPQGHALRDQLITWAEQVRPRVDGAFPDMPEGITDRPADVWE 241 Query 255 SLVAVADTAGGHWPKTARATAETDATA-NRGAKPSIGVLLLRDIR-RVFSDRDRMRTSDI 312 L+AVAD AGG WP+ AR TA N + S+GV LL D+R VF + T +I Sbjct 242 PLLAVADAAGGTWPERARQACVDLVTAVNEDDRASLGVKLLTDLRDHVFPGEVTVSTVEI 301 Query 313 LTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYG------IGPKFQHSGGEPPYKGYSRT 366 L LN +EE PWG + G PL+AR L+ L Y I P+ GG+ KGY R Sbjct 302 LHLLNGLEESPWGDL-DGRPLNARTLSKTLKEYVTAKSKPISPRPLRIGGQ-IVKGYHRD 359 Query 367 QFEDAWSRY 375 DAW+RY Sbjct 360 DLTDAWNRY 368 >gi|294628970|ref|ZP_06707530.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292832303|gb|EFF90652.1| conserved hypothetical protein [Streptomyces sp. e14] Length=410 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 168/361 (47%), Positives = 230/361 (64%), Gaps = 11/361 (3%) Query 24 PPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGK 83 P GA LL+++ AF RRF V+P++ +A TLW AH ++ +DSTPR+AFLSPEPGSGK Sbjct 4 PIDGAALLNEVEAFHRRFNVFPTEAAYVAVTLWDAHAHLLDCFDSTPRLAFLSPEPGSGK 63 Query 84 SRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGV 143 SRALE+ E L PR +N +P LFR V GRPT+L+DE DT+FGPKA ++E +RG Sbjct 64 SRALEIVETLTPRAEATVNASPNALFRLVEAAEGRPTLLFDEIDTVFGPKAGDNEPVRGF 123 Query 144 INAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTE 203 +N+G+R+ RCV G + ++CAVA+AGL LPDTI++RS+++RMR+RAP E Sbjct 124 LNSGYRRIGTMLRCVGDGANQSVQRFSSFCAVAMAGLGSLPDTILTRSVIIRMRKRAPNE 183 Query 204 PVEPWRPRVNGPEAEKLHDRLANWAAAINP-LESGWPAMPDGVTDRRADVWESLVAVADT 262 EP+R R+N + L DRLA WA ++ + WP +P+G+TDR ADVWE L+ VAD Sbjct 184 KCEPYRQRLNERQGHALRDRLAEWAESVREHVTDAWPELPEGITDRPADVWEPLITVADA 243 Query 263 AGGHWPKTAR-ATAETDATANRGAKPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRME 320 AGG WP AR A E A+ + S+GV LL D+R +VF DRM T+ IL L ++ Sbjct 244 AGGDWPARARIACLELVNAAHDNDEASLGVRLLTDLRDKVFCGADRMPTAVILEMLLALD 303 Query 321 EGPWGSIRRGDPLDARGLATRLGRYG------IGPKFQHSGGEPPYKGYSRTQFEDAWSR 374 + PWG + PL++R L+ LG+Y I P+ + P +GY DAW+R Sbjct 304 DAPWGDV-DDKPLNSRMLSKLLGQYVTPANKPIKPRAIRTASGTP-RGYYAEDLSDAWAR 361 Query 375 Y 375 Y Sbjct 362 Y 362 >gi|329936168|ref|ZP_08285961.1| hypothetical protein SGM_1453 [Streptomyces griseoaurantiacus M045] gi|329304278|gb|EGG48158.1| hypothetical protein SGM_1453 [Streptomyces griseoaurantiacus M045] Length=387 Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 178/359 (50%), Positives = 230/359 (65%), Gaps = 13/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LL+++ AF RRF V+P++ +A LW AH ++ +DSTPR+AFLSPEPGSGKSRA Sbjct 7 GAALLNEVEAFHRRFNVFPTEAAYVAVALWDAHAHLLDCFDSTPRLAFLSPEPGSGKSRA 66 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 LE+ E LVP P+ A+N + A LFR V+ GRPT+L+DE DT+FGPKA ++EE+RG +NA Sbjct 67 LEIVETLVPHPMTAVNASAAALFRAVSGADGRPTILFDEIDTIFGPKAGDNEELRGFLNA 126 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GHR+ V RC+ G + P+YCAVA+AGL LPDTI++RS+V+RMRRRA E VE Sbjct 127 GHRRSGVTYRCIGDGGNQTVQAFPSYCAVAVAGLGSLPDTILTRSVVIRMRRRARNERVE 186 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPLESG-WPAMPDGVTDRRADVWESLVAVADTAGG 265 P+R R++ E KL DRLA WA G WP MPDGVTDR ADVWE L+AVAD GG Sbjct 187 PFRARIHEVEGHKLRDRLAQWAEHARGFVMGAWPEMPDGVTDRPADVWEPLLAVADAVGG 246 Query 266 HWPKTARATAETDATANRGA-KPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLNRMEEGP 323 WP+ AR T TA++ K S+G+ LL D+R V DR+ T IL LN +++ P Sbjct 247 DWPRRAREACVTLVTASQTTDKHSLGIRLLTDLRDYVLIGIDRLPTIAILDRLNALDDAP 306 Query 324 WGSIRRGDPLDARGLATRLGRYGIGP-------KFQHSGGEPPYKGYSRTQFEDAWSRY 375 W + G PLD R L+ L Y + +GG KG+ DAW+RY Sbjct 307 WADL-DGKPLDNRRLSRMLAEYMTADNEPIRSRNIRTAGGV--LKGFHADDLTDAWARY 362 >gi|291453088|ref|ZP_06592478.1| phiRv2 prophage protein [Streptomyces albus J1074] gi|291356037|gb|EFE82939.1| phiRv2 prophage protein [Streptomyces albus J1074] Length=413 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 188/421 (45%), Positives = 252/421 (60%), Gaps = 21/421 (4%) Query 21 QPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPG 80 QP GA +LD + AF RRF V+P++ +A LW AH +E +++TPRIAFLSPEPG Sbjct 4 QPKTLEGASVLDLVEAFHRRFNVFPTEAAYVAVALWDAHAHLVECFETTPRIAFLSPEPG 63 Query 81 SGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEI 140 SGKSRALE+ E L PRPV ++ + L+R V G PTVL+DE DT+FGPKA E + Sbjct 64 SGKSRALEIVELLTPRPVSTVSASANALYRLVDSAAGLPTVLFDEVDTIFGPKAGADEAL 123 Query 141 RGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRA 200 RG +NAG+R+ A RCV G + +YCAVA+AGL LPDT+++R++++RMR+RA Sbjct 124 RGFLNAGYRRIGGALRCVGEGSNQNAQVFGSYCAVAMAGLGSLPDTVLTRAVIIRMRKRA 183 Query 201 PTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG-WPAMPDGVTDRRADVWESLVAV 259 P E VE +R R++ + L D+LA WA + +G WP MPDGVTDR ADVWE L+AV Sbjct 184 PNENVESYRQRLHEKQGHDLRDQLAAWADTVRDQVAGAWPDMPDGVTDRPADVWEPLLAV 243 Query 260 ADTAGGHWPKTARATA-ETDATANRGAKPSIGVLLLRDIR-RVFSDRDRMRTSDILTGLN 317 AD AGG WP ARA E A+ + S+GV LL D+R RVF DR+ T+ IL L Sbjct 244 ADAAGGDWPTRARAACLELVHAAHDNDEASLGVRLLTDLRDRVFCGADRVPTAVILEALL 303 Query 318 RMEEGPWGSIRRGDPLDARGLATRLGRYG------IGPK-FQHSGGEPPYKGYSRTQFED 370 ME+ PWG + P+ +R LA L +Y I P+ + G P KGY D Sbjct 304 AMEDAPWGDL-DDKPITSRSLARLLAQYVTPGNKPIKPRGIRTPAGTP--KGYYAEDLAD 360 Query 371 AWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGDLPYEPPAPNG 430 AW+RY P+E S ++ +A +P V + G++ AT AT + + P P Sbjct 361 AWTRYCPL---PPQE---SATSATAATPQV-NGGESVAAT-ATPIRHSTAEPATQPTLTT 412 Query 431 H 431 H Sbjct 413 H 413 >gi|300782286|ref|YP_003762577.1| hypothetical protein AMED_0353 [Amycolatopsis mediterranei U32] gi|299791800|gb|ADJ42175.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523647|gb|AEK38852.1| hypothetical protein RAM_01800 [Amycolatopsis mediterranei S699] Length=449 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/359 (44%), Positives = 214/359 (60%), Gaps = 14/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA++LD + AF+ RF V+PS+H LW AH E + TPR+ S EPGSGK+R Sbjct 92 GAQILDKVAAFVSRFNVFPSEHCAATLALWYAHTHAAEHFYVTPRLILDSAEPGSGKTRV 151 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGP-KAKEHEEIRGVIN 145 LEV + LV ++ T A LFR V+D G T+L+DE D +F P K E++R ++N Sbjct 152 LEVAQFLVRSAEMTLSATTAALFRLVSD--GPITILFDEVDAIFNPAKGGNTEDLRAMLN 209 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV + ++ E Y VALAG+ +PDTI +R+I MRRRAP E Sbjct 210 AGYKRSATIPRCVGDARAMKVERFKVYAPVALAGIAGHMPDTITTRAITFHMRRRAPGET 269 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VEP++ RV +A L D+LA W A++ N + P MP+GVTDR A++WE L+A+AD A Sbjct 270 VEPFKERVVERQAAPLRDKLATWVASVGNQVGDAEPEMPEGVTDRAAEIWEPLLAIADAA 329 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDR--DRMRTSDILTGLNRMEE 321 G HWP TARA +N S G+ LL D+RR+F+ R DR+ ++ I+ L MEE Sbjct 330 GEHWPATARAACAYFVASNSNRGGSFGIQLLADMRRIFAQRNTDRLPSTFIIAELLEMEE 389 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGP-KFQHSGGEPPYKGYS---RTQFEDAWSRYL 376 W + +G PL+ R +A L RY + P F++ G KGY+ T DAWSRYL Sbjct 390 SDWTDV-KGKPLNPRMMAKELARYDVKPTTFKYDGDS--VKGYTTTGETGLADAWSRYL 445 >gi|300787998|ref|YP_003768289.1| hypothetical protein AMED_6150 [Amycolatopsis mediterranei U32] gi|299797512|gb|ADJ47887.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=449 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 155/359 (44%), Positives = 214/359 (60%), Gaps = 14/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA++LD + AF+ RF V+PS+H LW AH E + TPR+ S EPGSGK+R Sbjct 92 GAQILDKVAAFVSRFNVFPSEHCAATLALWYAHTHAAEHFYVTPRLILDSAEPGSGKTRV 151 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGP-KAKEHEEIRGVIN 145 LEV + LV ++ T A LFR V+D G T+L+DE D +F P K E++R ++N Sbjct 152 LEVAQFLVRSAEMTLSATTAALFRLVSD--GPITILFDEVDAIFNPAKGGNTEDLRAMLN 209 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV + ++ E Y VALAG+ +PDTI +R+I MRRRAP E Sbjct 210 AGYKRSATIPRCVGDARAMKVERFKVYAPVALAGIAGHMPDTITTRAITFHMRRRAPGET 269 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VEP++ RV +A L D+LA W A++ N + P MP+GVTDR A++WE L+A+AD A Sbjct 270 VEPFKERVVERQATPLRDKLATWVASVGNQVGDAEPEMPEGVTDRAAEIWEPLLAIADAA 329 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDR--DRMRTSDILTGLNRMEE 321 G HWP TARA +N S G+ LL D+RR+F+ R DR+ ++ I+ L MEE Sbjct 330 GEHWPATARAACAYFVASNSNRGGSFGIQLLADMRRIFTQRNTDRLPSTFIIAELLEMEE 389 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGP-KFQHSGGEPPYKGYSR---TQFEDAWSRYL 376 W + +G PL+ R +A L RY + P F++ G KGY+ T DAWSRYL Sbjct 390 SDWTDV-KGKPLNPRMMAKELARYDVKPTTFKYDGDS--VKGYTTTGATGLADAWSRYL 445 >gi|340529575|gb|AEK44780.1| hypothetical protein RAM_31525 [Amycolatopsis mediterranei S699] Length=442 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 155/359 (44%), Positives = 214/359 (60%), Gaps = 14/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA++LD + AF+ RF V+PS+H LW AH E + TPR+ S EPGSGK+R Sbjct 85 GAQILDKVAAFVSRFNVFPSEHCAATLALWYAHTHAAEHFYVTPRLILDSAEPGSGKTRV 144 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGP-KAKEHEEIRGVIN 145 LEV + LV ++ T A LFR V+D G T+L+DE D +F P K E++R ++N Sbjct 145 LEVAQFLVRSAEMTLSATTAALFRLVSD--GPITILFDEVDAIFNPAKGGNTEDLRAMLN 202 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV + ++ E Y VALAG+ +PDTI +R+I MRRRAP E Sbjct 203 AGYKRSATIPRCVGDARAMKVERFKVYAPVALAGIAGHMPDTITTRAITFHMRRRAPGET 262 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VEP++ RV +A L D+LA W A++ N + P MP+GVTDR A++WE L+A+AD A Sbjct 263 VEPFKERVVERQATPLRDKLATWVASVGNQVGDAEPEMPEGVTDRAAEIWEPLLAIADAA 322 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDR--DRMRTSDILTGLNRMEE 321 G HWP TARA +N S G+ LL D+RR+F+ R DR+ ++ I+ L MEE Sbjct 323 GEHWPATARAACAYFVASNSNRGGSFGIQLLADMRRIFTQRNTDRLPSTFIIAELLEMEE 382 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGP-KFQHSGGEPPYKGYSR---TQFEDAWSRYL 376 W + +G PL+ R +A L RY + P F++ G KGY+ T DAWSRYL Sbjct 383 SDWTDV-KGKPLNPRMMAKELARYDVKPTTFKYDGDS--VKGYTTTGATGLADAWSRYL 438 >gi|190404502|ref|YP_001965266.1| replication initiator protein [Amycolatopsis mediterranei] gi|161087188|gb|ABX56677.1| replication initiator protein [Amycolatopsis mediterranei] Length=370 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 155/359 (44%), Positives = 214/359 (60%), Gaps = 14/359 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA++LD + AF+ RF V+PS+H LW AH E + TPR+ S EPGSGK+R Sbjct 13 GAQILDKVAAFVSRFNVFPSEHCAATLALWYAHTHAAEHFYVTPRLILDSAEPGSGKTRV 72 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGP-KAKEHEEIRGVIN 145 LEV + LV ++ T A LFR V+D G T+L+DE D +F P K E++R ++N Sbjct 73 LEVAQFLVRSAEMTLSATTAALFRLVSD--GPITILFDEVDAIFNPAKGGNTEDLRAMLN 130 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV + ++ E Y VALAG+ +PDTI +R+I MRRRAP E Sbjct 131 AGYKRSATIPRCVGDARAMKVERFKVYAPVALAGIAGHMPDTITTRAITFHMRRRAPGET 190 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VEP++ RV +A L D+LA W A++ N + P MP+GVTDR A++WE L+A+AD A Sbjct 191 VEPFKERVVERQAAPLRDKLATWVASVGNQVGDAEPEMPEGVTDRAAEIWEPLLAIADAA 250 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDR--DRMRTSDILTGLNRMEE 321 G HWP TARA +N S G+ LL D+RR+F+ R DR+ ++ I+ L MEE Sbjct 251 GEHWPATARAACAYFVASNSNRGGSFGIQLLADMRRIFAQRNTDRLPSTFIIAELLEMEE 310 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGP-KFQHSGGEPPYKGYS---RTQFEDAWSRYL 376 W + +G PL+ R +A L RY + P F++ G KGY+ T DAWSRYL Sbjct 311 SDWTDV-KGKPLNPRMMAKELARYDVKPTTFKYDGDS--VKGYTTTGETGLADAWSRYL 366 >gi|337767911|emb|CCB76624.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=417 Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 158/360 (44%), Positives = 203/360 (57%), Gaps = 23/360 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LLDD+ A + R+VV PS L A TLW+A A PR+ + P G GKSR Sbjct 23 GAALLDDLHAAIGRYVVLPSGEALTAVTLWVAASHIQPALQHAPRLTVVGPTKGCGKSRV 82 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L+V V RP+ +N +PA +FR + DP PT+L DE DT+FGPKA + E++RG++N Sbjct 83 LDVLHETVSRPMMTVNTSPAVVFRIIGEDP---PTLLVDEADTIFGPKAGDKEDLRGLLN 139 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++ A R I G + P + ALAG+ DLPDTIM R++V+RM++R P E V Sbjct 140 AGHQRNRPAWR--ISGPEHKPTAFPTFAMAALAGIGDLPDTIMDRAVVLRMQKRKPGEKV 197 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVAD 261 P+R R + PE L DRLA W + PL P MP V DR AD WE LV VAD Sbjct 198 APFRSRHSVPELNALRDRLAAW---LTPLRGTAHRLVPPMP--VEDRAADTWEPLVIVAD 252 Query 262 TAGGHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGL 316 AGGHWP ARA A T + ++ LLRDIRRVF D + +R+ D+L L Sbjct 253 LAGGHWPVQARAACLAMTRNEVVHDEQTTLKTRLLRDIRRVFEHQGDTEALRSHDLLAAL 312 Query 317 NRMEEGPWGSI-RRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 + E PWG +G L+A LA L +GI P K Y+R QF DAW+RY Sbjct 313 VQDAEAPWGEYGTKG--LNAYHLANLLRDFGISPANHRFENGRQAKAYARNQFLDAWARY 370 >gi|328884987|emb|CCA58226.1| DNA primase [Streptomyces venezuelae ATCC 10712] Length=633 Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 155/360 (44%), Positives = 206/360 (58%), Gaps = 23/360 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G +LD++RA + R+VV PS+ L A TLW+A A PR+A + P G GKSR Sbjct 159 GTAVLDELRAAIGRYVVLPSEEALTAVTLWVAASHIQPALQHAPRLAVVGPTKGCGKSRV 218 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L+V V RP+ +N +PA +FR + DP PT+L DE DT+FGPKA + E++RG++N Sbjct 219 LDVLHETVSRPMMTVNTSPAVVFRIIGEDP---PTLLVDEADTIFGPKAGDKEDLRGLLN 275 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++ A R I G + P + ALAG+ DLPDTIM R++V+RM++R P E V Sbjct 276 AGHQRNRPAWR--ISGPEHKPTAFPTFAMAALAGIGDLPDTIMDRAVVLRMQKRKPGEKV 333 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVAD 261 P+R R + PE L DRLA W + PL P MP V R AD WE LV VAD Sbjct 334 APFRSRHSVPELNALRDRLAAW---LTPLRGAAHRLVPPMP--VEVRAADTWEPLVIVAD 388 Query 262 TAGGHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGL 316 AGGHWP ARAT + T + + ++ LLRDIRRVF D++ +R+ D+L L Sbjct 389 LAGGHWPAQARATCLSMTRTELVQDEQTTLKTRLLRDIRRVFEQQGDQEALRSHDLLAAL 448 Query 317 NRMEEGPWGSI-RRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 + E PW +G L+A LA L +GI P K Y+R QF DAW+RY Sbjct 449 LQDAEAPWAEYGTKG--LNAYHLANLLRDFGISPANHRFENGRQAKAYARNQFLDAWARY 506 >gi|283455542|ref|YP_003360106.1| phiRv2 prophage protein [Bifidobacterium dentium Bd1] gi|283102176|gb|ADB09282.1| phiRv2 prophage protein [Bifidobacterium dentium Bd1] Length=440 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 154/366 (43%), Positives = 200/366 (55%), Gaps = 17/366 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G LL + R F+ ++V +PS+ A TLWIAH WF + +TPR+ F SPE SGK+RA Sbjct 69 GDRLLYETRRFITQYVDFPSEDFATAVTLWIAHTWFADTLYTTPRLIFSSPEKRSGKTRA 128 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVG--RPTVLYDECDTLFGPKAKEHEE-IRGV 143 EVT L P PV+ IN +PAYLFR++ G PT+ DE D LF KA E+ E IRG+ Sbjct 129 QEVTALLCPNPVNTINVSPAYLFRKLQPDEGDMLPTIFLDETDALFTGKASENTEAIRGI 188 Query 144 INAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTE 203 INAG+++GA GR IR K VE + P + V LAG+ LPDTI R+++V M+RR P Sbjct 189 INAGYKRGATVGRAEIRNKTVEVCDYPVFAPVCLAGIGGLPDTIEDRAVIVPMKRRRPDT 248 Query 204 PVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGW-----PAMPDGVTDRRADVWESLVA 258 ++P+R R EA L +RL W + W P +PD + DR ADVWE L Sbjct 249 RLKPFRDRSATAEAAPLRERLERWGRVQASIVETWRDADYPRLPDAIQDRDADVWEPLFI 308 Query 259 VADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVF--SDRDRMRTSDILTGL 316 VA AGG WP A A A S G LL DIR VF + + T ++ L Sbjct 309 VAGLAGGPWPGIAAAIAPKIIAGQHVEPTSAGERLLYDIRTVFDATGEQSLPTVTLIGRL 368 Query 317 NRMEEGPWGSIRRGDP-LDARGLATRLGRYGIGPKFQHSGG----EPPYKGYSRTQFEDA 371 +E+ PW ++ GD + R L L Y IG + H P +GY R FEDA Sbjct 369 KELEDSPWETM--GDSGIGVRDLGRMLKPYDIGIRHGHQHSIRWHGSPVRGYRREDFEDA 426 Query 372 WSRYLS 377 W+RYL Sbjct 427 WARYLQ 432 >gi|171741078|ref|ZP_02916885.1| hypothetical protein BIFDEN_00144 [Bifidobacterium dentium ATCC 27678] gi|171276692|gb|EDT44353.1| hypothetical protein BIFDEN_00144 [Bifidobacterium dentium ATCC 27678] Length=396 Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 154/366 (43%), Positives = 200/366 (55%), Gaps = 17/366 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G LL + R F+ ++V +PS+ A TLWIAH WF + +TPR+ F SPE SGK+RA Sbjct 25 GDRLLYETRRFITQYVDFPSEDFATAVTLWIAHTWFADTLYTTPRLIFSSPEKRSGKTRA 84 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVG--RPTVLYDECDTLFGPKAKEHEE-IRGV 143 EVT L P PV+ IN +PAYLFR++ G PT+ DE D LF KA E+ E IRG+ Sbjct 85 QEVTALLCPNPVNTINVSPAYLFRKLQPDEGDMLPTIFLDETDALFTGKASENTEAIRGI 144 Query 144 INAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTE 203 INAG+++GA GR IR K VE + P + V LAG+ LPDTI R+++V M+RR P Sbjct 145 INAGYKRGATVGRAEIRNKTVEVCDYPVFAPVCLAGIGGLPDTIEDRAVIVPMKRRRPDT 204 Query 204 PVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGW-----PAMPDGVTDRRADVWESLVA 258 ++P+R R EA L +RL W + W P +PD + DR ADVWE L Sbjct 205 RLKPFRDRSATAEAAPLRERLERWGRVQASIVETWRDADYPRLPDAIQDRDADVWEPLFI 264 Query 259 VADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVF--SDRDRMRTSDILTGL 316 VA AGG WP A A A S G LL DIR VF + + T ++ L Sbjct 265 VAGLAGGPWPGIAAAIAPKIIAGQHVEPTSAGERLLYDIRTVFDATGEQSLPTVTLIGRL 324 Query 317 NRMEEGPWGSIRRGDP-LDARGLATRLGRYGIGPKFQHSGG----EPPYKGYSRTQFEDA 371 +E+ PW ++ GD + R L L Y IG + H P +GY R FEDA Sbjct 325 KELEDSPWETM--GDSGIGVRDLGRMLKPYDIGIRHGHQHSIRWHGSPVRGYRREDFEDA 382 Query 372 WSRYLS 377 W+RYL Sbjct 383 WARYLQ 388 >gi|291447434|ref|ZP_06586824.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291350381|gb|EFE77285.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=426 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 151/356 (43%), Positives = 202/356 (57%), Gaps = 15/356 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G +LD++RA + R+VV PS+ L A TLW+A A PR+A + P G GKSR Sbjct 32 GTVVLDELRAAIGRYVVLPSEEALTAVTLWVAASHIQPALQHAPRLAVVGPTKGCGKSRV 91 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L+V V +P+ +N +PA +FR + DP PT+L DE DT+FGPKA + E++RG++N Sbjct 92 LDVLHETVYKPMMTVNTSPAVVFRIIGEDP---PTLLVDEADTIFGPKAGDKEDLRGLLN 148 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++ A R I G + P + ALAG+ DLPDTIM R++V+RM++R P E V Sbjct 149 AGHQRNRPAWR--ISGPEHKPTAFPTFAMAALAGIGDLPDTIMDRAVVLRMQKRKPGEKV 206 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAINPLESGW-PAMPDGVTDRRADVWESLVAVADTAG 264 P+R R + PE L DRLA W A + P MP V DR AD WE LV VAD AG Sbjct 207 APFRSRHSVPELNALRDRLAAWLAPLRGTAHRLVPPMP--VEDRAADTWEPLVIVADLAG 264 Query 265 GHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGLNRM 319 GHWP ARA A T + + ++ LLRDIRR F D++ +R+ D+L L + Sbjct 265 GHWPAQARAACLAMTRTELVQDEQTTLKTRLLRDIRRAFEQHGDQEALRSHDLLAALLQD 324 Query 320 EEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 E PW L+A LA L +G+ P K Y+R QF DAW+RY Sbjct 325 AEAPWAEYGTKG-LNAYHLANLLRDFGVSPANHRFENGRQAKAYARNQFLDAWARY 379 >gi|239990425|ref|ZP_04711089.1| phiRv2 prophage protein [Streptomyces roseosporus NRRL 11379] Length=550 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 151/356 (43%), Positives = 202/356 (57%), Gaps = 15/356 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G +LD++RA + R+VV PS+ L A TLW+A A PR+A + P G GKSR Sbjct 156 GTVVLDELRAAIGRYVVLPSEEALTAVTLWVAASHIQPALQHAPRLAVVGPTKGCGKSRV 215 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L+V V +P+ +N +PA +FR + DP PT+L DE DT+FGPKA + E++RG++N Sbjct 216 LDVLHETVYKPMMTVNTSPAVVFRIIGEDP---PTLLVDEADTIFGPKAGDKEDLRGLLN 272 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++ A R I G + P + ALAG+ DLPDTIM R++V+RM++R P E V Sbjct 273 AGHQRNRPAWR--ISGPEHKPTAFPTFAMAALAGIGDLPDTIMDRAVVLRMQKRKPGEKV 330 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAINPLESGW-PAMPDGVTDRRADVWESLVAVADTAG 264 P+R R + PE L DRLA W A + P MP V DR AD WE LV VAD AG Sbjct 331 APFRSRHSVPELNALRDRLAAWLAPLRGTAHRLVPPMP--VEDRAADTWEPLVIVADLAG 388 Query 265 GHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGLNRM 319 GHWP ARA A T + + ++ LLRDIRR F D++ +R+ D+L L + Sbjct 389 GHWPAQARAACLAMTRTELVQDEQTTLKTRLLRDIRRAFEQHGDQEALRSHDLLAALLQD 448 Query 320 EEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 E PW L+A LA L +G+ P K Y+R QF DAW+RY Sbjct 449 AEAPWAEYGTKG-LNAYHLANLLRDFGVSPANHRFENGRQAKAYARNQFLDAWARY 503 >gi|254776192|ref|ZP_05217708.1| hypothetical protein MaviaA2_16180 [Mycobacterium avium subsp. avium ATCC 25291] Length=485 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 167/444 (38%), Positives = 229/444 (52%), Gaps = 30/444 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELLDDI F F + S H L+ LWIAH W + A+ TPR+ SPEPGSGK+R Sbjct 18 GAELLDDIERFAGPFFAFRSPHYLVVIVLWIAHTWTVGAFYVTPRLIIDSPEPGSGKTRV 77 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRP-TVLYDECDTLFGPKAK-EHEEIRGVI 144 LEV L ++ T A L+RR+A +P T+L DE D +FG A + E++R + Sbjct 78 LEVLALLCRNAKLTLSTTTAALYRRIAAAGDQPPTILQDEADAVFGRTANPQAEDLRALF 137 Query 145 NAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSI-VVRMRRRAPT 202 NAG+++GA RC K + E P + +ALAGL +P T++ R+ V+ MR+RAP Sbjct 138 NAGYKRGATVDRCEGDAKSMRVVEFPVFAPLALAGLAGKMPRTVLDRAAAVLHMRKRAPD 197 Query 203 EPVEPWRPRVNGPEAEKLHDRLANWAAA-INPLESGWPAMPDGVTDRRADVWESLVAVAD 261 E V +R R A L DRL++WA + L + P MPDGV DR A+VWESL+AVAD Sbjct 198 EHVAEFRERDAEAHAAPLRDRLSDWAETNFDALCAARPTMPDGVRDRAAEVWESLLAVAD 257 Query 262 TAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRMEE 321 AGG WP AR+ N + S G LLRD+R VF +RDRM + DI++ L +E Sbjct 258 AAGGDWPARARSACRHFVLDNEVEELSSGARLLRDVRTVFGERDRMFSVDIVSALTSDDE 317 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGPKFQH--SGGEPPYKGYSRTQFEDAWSRYL--S 377 W + G PLD R LA L RYG+ +G Y+ AW RY+ + Sbjct 318 SEWADL-WGKPLDQRRLAKELARYGVRSNTIRIGNGRAKGYQVAGDDGLAQAWQRYVPTA 376 Query 378 ADDETPEERDLSVS---------------AVSAVSPPVGDPGDATGATDATDLPEAGDLP 422 + + ++RD++ A S + D T T + + +P Sbjct 377 SIRDVRDDRDIAAQRVTDENGTRDMRDGRAASVTHKKMSDQDVCQSGTAVTAVTGSNGIP 436 Query 423 YEPPAPNGHPNGDAPLCSGPG-CP 445 +GH NG +GPG CP Sbjct 437 RR----DGHRNGRFAPPTGPGRCP 456 >gi|340626059|ref|YP_004744511.1| putative prophage protein [Mycobacterium canettii CIPT 140010059] gi|340004249|emb|CCC43390.1| putative prophage protein [Mycobacterium canettii CIPT 140010059] Length=545 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 157/446 (36%), Positives = 231/446 (52%), Gaps = 52/446 (11%) Query 28 AELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRAL 87 A +LDD+ ++R+V++P +H +A LWI + A++ PR+ SPE GK+R L Sbjct 88 ARMLDDLLETIKRYVIFPDEHAAVATALWIVTTHALPAFECAPRLVITSPEKRCGKTRLL 147 Query 88 EVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPK--AKEHEEIRGVIN 145 +V RP+ N T A +FR + D PT++ DE DT+FG K A+ +EE+R ++N Sbjct 148 DVITGTCHRPLATANATVAAIFRSIGDD-HPPTLIIDEADTIFGSKKVAENNEELRALLN 206 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++G A RCV G + E +C VALAG+ +PDTI R + + RRR+ E V Sbjct 207 AGHQRGRPALRCV--GPMQIPTEFSTFCMVALAGIGAMPDTITDRGVNITQRRRSTGEKV 264 Query 206 EPWRPRVNGPEAEKLHDRLANWAAA-INPLESGWPAMPDGVTDRRADVWESLVAVADTAG 264 + +R R +GP+ +++ +RLA WAA + L+ P MP V DR AD WE L+AVAD AG Sbjct 265 QQYRSRRDGPKLQEIRERLAKWAAGHLEELKQATPDMP--VQDRAADTWEPLIAVADVAG 322 Query 265 GHWPKTARA--TAETDATANRGAKPSIGVLLLRDIRRVFSDRD--RMRTSDILTGLNRME 320 GHWP TARA A +A + S+G LL DIR +F++R + ++D+++ L +++ Sbjct 323 GHWPDTARAACVALVNAADSADEDSSLGTKLLADIRSIFTERTVPFLASADLVSALRKLD 382 Query 321 EGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRYL---- 376 E PW L R LA RL +GI P+ G +GY DA+SRY+ Sbjct 383 ESPWNDFE----LTTRKLAYRLKGFGIKPE---RIGHAAVRGYKLESLHDAFSRYIRQEP 435 Query 377 ------------------SADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEA 418 AD + ++ +A +P + DA G T Sbjct 436 SASVAPQVKPQNGADTSNGADTSIRQRENIRQQETAAQTPLLTVLTDADGCPAETS---- 491 Query 419 GDLPYEPPAPNGHPNGDAPLCSGPGC 444 + P+P P PLC PGC Sbjct 492 -----QKPSPATMPKRRPPLC--PGC 510 >gi|297192328|ref|ZP_06909726.1| phiRv2 prophage protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719689|gb|EDY63597.1| phiRv2 prophage protein [Streptomyces pristinaespiralis ATCC 25486] Length=440 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 149/359 (42%), Positives = 200/359 (56%), Gaps = 21/359 (5%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GA LLDD+ A + R+VV P + L A TLW+A A PR+A + P G GKSR Sbjct 46 GAALLDDLHAAIGRYVVLPREEALTAVTLWVAASHIQPALQHAPRLAVVGPTKGCGKSRV 105 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINA 146 L+V V +P+ +N +PA +FR + PT+L DE DT+FGPKA + E++RG++NA Sbjct 106 LDVLHETVHQPMMTVNTSPAVVFRVIGK--NAPTLLVDEADTIFGPKAGDKEDLRGLLNA 163 Query 147 GHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVE 206 GH++ A R I G + P + ALAG+ DLPDTIM R++V+RM++R P E + Sbjct 164 GHQRNRPAWR--ISGPEHKPTAFPTFAMAALAGIGDLPDTIMDRAVVIRMQKRKPGEQIA 221 Query 207 PWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVADT 262 +R R + PE L DRL W + PL P MP V DR AD WE LV VAD Sbjct 222 AFRSRYSVPELNALRDRLTAW---LTPLRGAAARLVPPMP--VEDRAADTWEPLVIVADL 276 Query 263 AGGHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGLN 317 AGGHWP ARA A T + + ++ LLRD+RRVF +++ +R+ D+L L Sbjct 277 AGGHWPSRARAACLAMTRNEVVQDEQTTLKTRLLRDVRRVFEQEGNKEALRSQDLLAALV 336 Query 318 RMEEGPWGSI-RRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 + E PW +G L+A LA L GI P K Y+R QF DAW+RY Sbjct 337 QDAEAPWAEYGTKG--LNAYHLANLLRDSGISPANHRFENGRQAKAYARNQFLDAWARY 393 >gi|291452949|ref|ZP_06592339.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291355898|gb|EFE82800.1| conserved hypothetical protein [Streptomyces albus J1074] Length=403 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 154/365 (43%), Positives = 203/365 (56%), Gaps = 17/365 (4%) Query 19 DGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPE 78 D +P P G++LLD++R+ + +FV+ PS L A TLW+ AW PR+A + P Sbjct 34 DAEPTP--GSDLLDELRSQIAQFVIPPSSEALNAVTLWVVATQLQPAWQHAPRLAVVGPA 91 Query 79 PGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPK-AKEH 137 GKSR L+V V P+ IN TPA +FR + + PT+L DE DT+FGPK A+++ Sbjct 92 KRCGKSRLLDVLTETVHEPMLTINTTPAAIFRSINEEEP-PTLLVDEADTIFGPKVAEKN 150 Query 138 EEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMR 197 EE RG++NAGH++G R V G + + A+AG+ DLPDT+M RS+V+RMR Sbjct 151 EETRGLLNAGHQRGRYVTRVV--GNDHTPHKFATFAMAAIAGIGDLPDTVMDRSVVIRMR 208 Query 198 RRAPTEPVEPWRPRVNGPEAEKLHDRLANWAA-AINPLESGWPAMPDGVTDRRADVWESL 256 RRA E V+P+R R + P +L DR+ WA + S P MP V DR AD WE L Sbjct 209 RRAEGEKVKPFRSRRDIPALHELRDRIRAWALPLLEDAASLEPEMP--VEDRAADTWEPL 266 Query 257 VAVADTAGGHWPKTARATAETDATANRGAK---PSIGVLLLRDIRRVF---SDRDRMRTS 310 V VAD AGG WP+ AR A A+ PS G +L DIRRVF + D + T Sbjct 267 VIVADLAGGRWPRLARIACARMVAAEVAAEEDHPS-GARILADIRRVFFAQREADSLSTE 325 Query 311 DILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFED 370 D+L LN E PWG R L +R L+ L Y I P KGY+R +F D Sbjct 326 DLLHHLNADAEAPWGERGRYG-LTSRELSGMLRNYDIRPGNVRMADRTQRKGYTRNKFLD 384 Query 371 AWSRY 375 AW RY Sbjct 385 AWRRY 389 >gi|300790587|ref|YP_003770878.1| hypothetical protein AMED_8783 [Amycolatopsis mediterranei U32] gi|299800101|gb|ADJ50476.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532275|gb|AEK47480.1| hypothetical protein RAM_45065 [Amycolatopsis mediterranei S699] Length=510 Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 145/358 (41%), Positives = 202/358 (57%), Gaps = 12/358 (3%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G E+LD + F+ RF + ++H LW AH E TPR+ S EPGSGK+R Sbjct 83 GHEVLDAVVTFVSRFSAFANEHAAPTLALWYAHTHVAERLYVTPRLILDSAEPGSGKTRV 142 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKA-KEHEEIRGVIN 145 LEV + LV +P I+ TPA +FR +AD G T+L+DE D +F PK +E++R ++N Sbjct 143 LEVAQYLVAKPEMTISITPAAIFRMLAD--GPMTLLFDEIDAVFNPKTGGNNEDLRALLN 200 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV K + P Y VALAG+ +PDTI +R+I V MR+R E Sbjct 201 AGYKRSATVTRCVGDAKSMNVTRFPVYAPVALAGIAGGMPDTITTRAITVHMRKRRFDEV 260 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VE + E+ + LA W + + + P PDGV DR A++W L+A+AD A Sbjct 261 VEEFIEEDVERESAPVRADLAEWVGRVGDEVSRARPERPDGVRDRAAEIWRPLLAIADAA 320 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFS--DRDRMRTSDILTGLNRMEE 321 GGHWP+TAR SIGV LL DIR++F+ + DRM T++++ L+ +E+ Sbjct 321 GGHWPETARRACRHFVLEATAQPASIGVRLLADIRQIFAAENTDRMVTAELIRELHAIED 380 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGY---SRTQFEDAWSRYL 376 GPW + +G PLD+R LA L RY + PK G+ KGY DAWSRYL Sbjct 381 GPWTDV-QGKPLDSRRLAKELDRYLVRPKDLKISGK-TLKGYRIDGDGGLADAWSRYL 436 >gi|284028384|ref|YP_003378315.1| hypothetical protein Kfla_0392 [Kribbella flavida DSM 17836] gi|283807677|gb|ADB29516.1| conserved hypothetical protein [Kribbella flavida DSM 17836] Length=450 Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 155/403 (39%), Positives = 217/403 (54%), Gaps = 17/403 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELLD++ A + R+VV PSD L A LWIA + AW+ PR+ +PE GKSR Sbjct 14 GAELLDEVAATITRYVVLPSDAALTAVVLWIAATHAVPAWNCAPRLVIRAPEKRCGKSRL 73 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L++ + +V RP+ N +P+ ++R + P PT+L DE DT+FGPKA ++E++RG++N Sbjct 74 LDMADGMVHRPLMTTNASPSAVYRSIGLTPSDPPTLLIDEADTIFGPKAGDNEDLRGLLN 133 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++G R + VE E + ALAG+ +PDTI R+ V+RMRRRA E V Sbjct 134 AGHQRGRPTLRYDAGSRSVERIE--TFAMAALAGIGTMPDTIEDRAAVIRMRRRAAGETV 191 Query 206 EPWRPRVNGPEAEKLHDRLANWAAA-INPLESGWPAMPDGVTDRRADVWESLVAVADTAG 264 +P+R R +GP L DRL W A ++ L S P+MP + DR AD WE L+A+AD AG Sbjct 192 QPYRVRRDGPVLADLRDRLHAWVTAHLDELTSAAPSMP--LEDRAADTWEPLIALADLAG 249 Query 265 GHWPKTARATAET-DATANRGAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRMEEGP 323 G WP+ AR A T A + S+ V LL D R F + ++ ++ L EE P Sbjct 250 GDWPQAARQAALTLLAELQDSTEVSLSVRLLSDCRTAFGAASALPSTVLVQRLRADEESP 309 Query 324 WGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRYLSADDETP 383 W L R LA L + I PK KGY+R F DAW+RY P Sbjct 310 WQEGPGVGGLTVRRLAALLREFDITPKNHRWEDGTQSKGYTRDDFTDAWARY------CP 363 Query 384 EERDLSVSAVSAVS----PPVGDPGDATGATDATDLPEAGDLP 422 E ++ S + + P G GD + D ++ P +P Sbjct 364 EPAEIGSSQPTVANRPNRPNAGHAGDGSVLRDGSNRPNDPSVP 406 >gi|284031275|ref|YP_003381206.1| hypothetical protein Kfla_3347 [Kribbella flavida DSM 17836] gi|283810568|gb|ADB32407.1| conserved hypothetical protein [Kribbella flavida DSM 17836] Length=436 Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 156/402 (39%), Positives = 222/402 (56%), Gaps = 17/402 (4%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELLD + A + R+V+ PS A LWIA + AW+ PR+ +PE GKSR Sbjct 19 GAELLDTVAATIARYVILPSQSAATAVVLWIAATHAVAAWNCAPRLVIRAPERRCGKSRL 78 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L++ E + RP+ +N +P+ ++R + P PT+L DE DT+FGPKA E+E++RG++N Sbjct 79 LDMVEGMCHRPLMTVNASPSAVYRSIGMAPSDPPTLLIDEADTIFGPKAGENEDLRGLLN 138 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++G A R + V E++ + ALAG+ +PDTI R+ V+RMRRRA E V Sbjct 139 AGHQRGRPALRYDAGSRSV--EKIQTFAMAALAGIGAMPDTIEDRAAVIRMRRRAAGEEV 196 Query 206 EPWRPRVNGPEAEKLHDRLANWAAA-INPLESGWPAMPDGVTDRRADVWESLVAVADTAG 264 P+R R +GPE ++L RL W + I+ L + P MP + DR AD WE ++AVAD AG Sbjct 197 APYRVRRDGPELDELRQRLNQWLTSHIDQLRAATPDMP--LEDRAADTWEPMIAVADLAG 254 Query 265 GHWPKTARATAETDATANR--GAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRMEEG 322 G WP+ AR A T++R G + SI LL D R F D D + T +L L E Sbjct 255 GQWPRAARKAA-VALTSDRDAGDETSIPSRLLADCRTAFQDADALPTQILLDRLRSDPEA 313 Query 323 PWGSIRRGDPLDARGLATRLGRYGI-GPKFQHSGGEPPYKGYSRTQFEDAWSRYLSADDE 381 PW ++ L A + L + I + G+ KGY R+ F DAW+RY Sbjct 314 PWATMGAAG-LTAMRMGNLLREFEIRSDTIRFPTGQ--AKGYHRSDFTDAWNRYCPEPKP 370 Query 382 TPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGDLPY 423 P E +V AV A +P V P +A+ A +P +P+ Sbjct 371 APGE---AVPAVPASTPQVS-PKEASATGTAQAVPTTQAVPH 408 >gi|290959276|ref|YP_003490458.1| hypothetical protein SCAB_48621 [Streptomyces scabiei 87.22] gi|260648802|emb|CBG71915.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=420 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 156/364 (43%), Positives = 202/364 (56%), Gaps = 19/364 (5%) Query 22 PMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGS 81 P P G+ LLD++RA + RFV+ PS L A TLW+A AW PR+A + P Sbjct 49 PEPTPGSALLDELRAKIARFVILPSPEALDAVTLWVAATHLQPAWQHAPRLAVVGPAKRC 108 Query 82 GKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFG--PKAKEHEE 139 GKSR L+V V P+ IN TPA +FR + + PT+L DE DT+FG +A+++EE Sbjct 109 GKSRLLDVLTETVHEPMLTINTTPAAIFRSITE--EPPTLLVDEADTIFGTPKQAEKNEE 166 Query 140 IRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRR 199 +RG++NAGH++ R V G + ALAG+ DLPDTIM RS+V+RMRRR Sbjct 167 MRGLLNAGHQRNRYVTRVV--GNDHTPHRFATFAMAALAGIGDLPDTIMDRSVVIRMRRR 224 Query 200 APTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGW-PAMPDGVTDRRADVWESLVA 258 A E V+P+R R + P L DRLA WA + +G PAMP V DR AD WE LV Sbjct 225 AEGESVKPFRSRRDTPALHDLRDRLAAWARPLLDEAAGLEPAMP--VEDRAADTWEPLVI 282 Query 259 VADTAGGHWPKTARATAETDATANRGAK---PSIGVLLLRDIRRVF---SDRDRMRTSDI 312 VAD A G WP+ ARA E A A+ PS +L DIRRVF + D + T ++ Sbjct 283 VADLAAGPWPRLARAACEEMVAAEVAAEEDHPS-SARILADIRRVFVAQREVDSLSTDEL 341 Query 313 LTGLNRMEEGPWGSI-RRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDA 371 L L + EGPW R+G L R L + L + I P KGY+R +F DA Sbjct 342 LHHLRQDLEGPWAEWGRKG--LGPRELGSLLRAFDIRPGNVRLADGTQRKGYTRNKFLDA 399 Query 372 WSRY 375 W RY Sbjct 400 WRRY 403 >gi|300781948|ref|YP_003762239.1| hypothetical protein AMED_0012 [Amycolatopsis mediterranei U32] gi|299791462|gb|ADJ41837.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523302|gb|AEK38507.1| hypothetical protein RAM_00060 [Amycolatopsis mediterranei S699] Length=518 Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 149/387 (39%), Positives = 211/387 (55%), Gaps = 25/387 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G E+LD + F+ RF + ++H LW AH E TPR+ S EPGSG++R Sbjct 91 GHEVLDAVVTFVSRFSAFANEHAAPTLALWYAHTHVAERLYVTPRLILDSAEPGSGETRV 150 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKA-KEHEEIRGVIN 145 LEV + LV +P I+ TPA +FR +AD G T+L+DE D +F PK +E++R ++N Sbjct 151 LEVAQYLVAKPEMTISITPAAIFRMLAD--GPMTLLFDEIDAVFNPKTGGNNEDLRALLN 208 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGL-DDLPDTIMSRSIVVRMRRRAPTEP 204 AG+++ A RCV K + P Y VALAG+ +PDTI +R+I V MR+R E Sbjct 209 AGYKRSATVTRCVGDAKSMNVTRFPVYAPVALAGIAGGMPDTITTRAITVHMRKRRFDEA 268 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAI-NPLESGWPAMPDGVTDRRADVWESLVAVADTA 263 VE + E+ + LA W + + + P PDGV DR A++W L+A+AD A Sbjct 269 VEEFIEEDVERESAPVRAELAEWVGRVGDEVSRARPDRPDGVRDRAAEIWRPLLAIADAA 328 Query 264 GGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFS--DRDRMRTSDILTGLNRMEE 321 GGHWP+TAR SIGV LL D+R++F+ DRM T++++ L+ +E+ Sbjct 329 GGHWPETARKACRHFVLEATAQPASIGVRLLADVRQIFTAEHTDRMVTAELIRELHAIED 388 Query 322 GPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGY---SRTQFEDAWSRYL-- 376 PW + +G PLD+R LA L RY + PK + KGY DAWSRYL Sbjct 389 EPWTDL-QGKPLDSRRLAEELDRYLVRPK-DLKVSDKTLKGYRIDGDGGLADAWSRYLPP 446 Query 377 ------SADDETPEERDLSVSAVSAVS 397 SA + TP+ V+A S V+ Sbjct 447 PETGATSATNATPQ-----VTATSGVA 468 >gi|318057335|ref|ZP_07976058.1| hypothetical protein SSA3_05311 [Streptomyces sp. SA3_actG] gi|318075314|ref|ZP_07982646.1| hypothetical protein SSA3_00975 [Streptomyces sp. SA3_actF] Length=415 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 149/372 (41%), Positives = 203/372 (55%), Gaps = 27/372 (7%) Query 20 GQPMPPV---GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLS 76 G+P+ P G L++IR LRR+VV P + A TLW+A +AW PR+A + Sbjct 25 GRPVSPQVTEGQRALEEIREHLRRYVVLPGEETFTAVTLWVAATHLQKAWQHAPRLAVVG 84 Query 77 PEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPK-- 133 P GKSR L+V V P+ +N + A ++R + DP PT+L DE DTLFG Sbjct 85 PAKRCGKSRLLDVITESVHDPLITVNASAAAIYRSITEDP---PTLLVDEADTLFGSSKV 141 Query 134 AKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIV 193 A+++EE+RG++NAGH++ R + G E + P + ALAG+ DLPDTIM RS+V Sbjct 142 AEKNEELRGLLNAGHQRNRPTLR--VSGSNHEVTKHPTFAMAALAGIGDLPDTIMDRSVV 199 Query 194 VRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRR 249 +RMRRR P E V +R + P + D+LA+W ++PL + PAMP V DR Sbjct 200 IRMRRRRPGETVAEFRTFRDTPALHAVRDQLAHW---LDPLHAKAMEMTPAMP--VQDRA 254 Query 250 ADVWESLVAVADTAGGHWPKTARATAETDA---TANRGAKPSIGVLLLRDIRRVFSDRDR 306 AD W+ LVAVAD AGG WP AR + AN S+G+ LL DIR F+ Sbjct 255 ADTWQPLVAVADLAGGPWPDLARTACQVMTEREAANEQDNGSLGIRLLADIRHAFTTEGN 314 Query 307 ---MRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGY 363 +RTS +L LN+ E PW + L RGL L YGI + G +GY Sbjct 315 PPALRTSRLLDILNQDAETPWPEYTV-NGLTPRGLQILLKEYGISSAVRRFHGNVQARGY 373 Query 364 SRTQFEDAWSRY 375 +R F D+W+RY Sbjct 374 ARLDFADSWARY 385 >gi|291446417|ref|ZP_06585807.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291349364|gb|EFE76268.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=412 Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 146/362 (41%), Positives = 200/362 (56%), Gaps = 24/362 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G E+L +R + R+VV PS+ +A TLW+A AW PR+A + P GKSR Sbjct 50 GEEVLTSLREQILRYVVMPSEEASVAVTLWVAATHLQTAWQHAPRLAVVGPAKRCGKSRL 109 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPK--AKEHEEIRGVI 144 L+V V P+ +N + A +FR + D PT+L DE DTLFG A+++EE+RG++ Sbjct 110 LDVITESVHDPLITVNASAAAVFRSITD--TPPTLLVDEADTLFGSAKVAEKNEEMRGLL 167 Query 145 NAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEP 204 NAGH++ R + G E + P + ALAG+ DLPDTIM RS+V+RMRRR P E Sbjct 168 NAGHQRNRPTLR--VSGPNHEVSKFPTFAMAALAGIGDLPDTIMDRSVVIRMRRRMPGEK 225 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVA 260 V +R + P L +RLA W + PL + PAMP V DR AD W+ LV+VA Sbjct 226 VAEFRTFRDTPPLHALRERLATW---LGPLHASAMELTPAMP--VEDRAADTWQPLVSVA 280 Query 261 DTAGGHWPKTAR----ATAETDATANRGAKPSIGVLLLRDIRRVFSDRDR---MRTSDIL 313 D AGG WP AR A+ +A ++ + S+G+ LL D+RR F+ +RTS +L Sbjct 281 DLAGGMWPSLARDACQVMAKHEAEQDQD-RSSLGIRLLADVRRAFASEGNPPALRTSRLL 339 Query 314 TGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWS 373 LN+ E PW + L RGL L YGI + G +GY+R F DAW+ Sbjct 340 DILNQDAETPWPEY-TANGLTPRGLQILLNEYGISSAPKRFHGNVQARGYTRRHFADAWA 398 Query 374 RY 375 RY Sbjct 399 RY 400 >gi|239989406|ref|ZP_04710070.1| putative phiRv2 prophage protein [Streptomyces roseosporus NRRL 11379] Length=409 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 146/362 (41%), Positives = 200/362 (56%), Gaps = 24/362 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 G E+L +R + R+VV PS+ +A TLW+A AW PR+A + P GKSR Sbjct 47 GEEVLTSLREQILRYVVMPSEEASVAVTLWVAATHLQTAWQHAPRLAVVGPAKRCGKSRL 106 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPK--AKEHEEIRGVI 144 L+V V P+ +N + A +FR + D PT+L DE DTLFG A+++EE+RG++ Sbjct 107 LDVITESVHDPLITVNASAAAVFRSITD--TPPTLLVDEADTLFGSAKVAEKNEEMRGLL 164 Query 145 NAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEP 204 NAGH++ R + G E + P + ALAG+ DLPDTIM RS+V+RMRRR P E Sbjct 165 NAGHQRNRPTLR--VSGPNHEVSKFPTFAMAALAGIGDLPDTIMDRSVVIRMRRRMPGEK 222 Query 205 VEPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVA 260 V +R + P L +RLA W + PL + PAMP V DR AD W+ LV+VA Sbjct 223 VAEFRTFRDTPPLHALRERLATW---LGPLHASAMELTPAMP--VEDRAADTWQPLVSVA 277 Query 261 DTAGGHWPKTAR----ATAETDATANRGAKPSIGVLLLRDIRRVFSDRDR---MRTSDIL 313 D AGG WP AR A+ +A ++ + S+G+ LL D+RR F+ +RTS +L Sbjct 278 DLAGGMWPSLARDACQVMAKHEAEQDQD-RSSLGIRLLADVRRAFASEGNPPALRTSRLL 336 Query 314 TGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWS 373 LN+ E PW + L RGL L YGI + G +GY+R F DAW+ Sbjct 337 DILNQDAETPWPEY-TANGLTPRGLQILLNEYGISSAPKRFHGNVQARGYTRRHFADAWA 395 Query 374 RY 375 RY Sbjct 396 RY 397 >gi|302520277|ref|ZP_07272619.1| phiRv2 prophage protein [Streptomyces sp. SPB78] gi|302429172|gb|EFL00988.1| phiRv2 prophage protein [Streptomyces sp. SPB78] Length=426 Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 151/384 (40%), Positives = 202/384 (53%), Gaps = 24/384 (6%) Query 5 PYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFME 64 P GR +P P G L++IR LRR+VV P + A TLW+A + Sbjct 24 PAGRAWPPVAIPGRPASPQVTEGQRALEEIREHLRRYVVLPGEETFTAVTLWVAATHLQK 83 Query 65 AWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLY 123 AW PR+A + P GKSR L+V V P+ +N + A ++R + DP PT+L Sbjct 84 AWQHAPRLAVVGPAKRCGKSRLLDVITESVHDPLITVNASAAAIYRSITEDP---PTLLV 140 Query 124 DECDTLFGPK--AKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLD 181 DE DTLFG A+++EE+RG++NAGH++ R + G E + P + ALAG+ Sbjct 141 DEADTLFGSSKVAEKNEELRGLLNAGHQRNRPTLR--VSGPNHEVTKHPTFAMAALAGIG 198 Query 182 DLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG---- 237 DLPDTIM RS+V+RMRRR P E V +R + P + D+LA W ++PL + Sbjct 199 DLPDTIMDRSVVIRMRRRRPGEKVAEFRTFRDTPALHAVRDQLATW---LDPLHAKAMEM 255 Query 238 WPAMPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDA---TANRGAKPSIGVLLL 294 PAMP V DR AD W+ LVAVAD AGG WP AR + AN S+G+ LL Sbjct 256 TPAMP--VQDRAADTWQPLVAVADLAGGPWPDLARTACQVMTEREAANEQDNGSLGIHLL 313 Query 295 RDIRRVFSDRDR---MRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKF 351 DIR F+ +RTS +L LN+ E PW L RGL L YGI Sbjct 314 ADIRHAFTTEGNPPALRTSRLLDILNQDAETPWPEYTVNG-LTPRGLQILLKEYGISSAV 372 Query 352 QHSGGEPPYKGYSRTQFEDAWSRY 375 + G +GY+R F D+W+RY Sbjct 373 RRFHGNVQARGYARLDFADSWARY 396 >gi|333025992|ref|ZP_08454056.1| putative phiRv2 prophage protein [Streptomyces sp. Tu6071] gi|332745844|gb|EGJ76285.1| putative phiRv2 prophage protein [Streptomyces sp. Tu6071] Length=395 Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 149/372 (41%), Positives = 202/372 (55%), Gaps = 27/372 (7%) Query 20 GQPMPPV---GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLS 76 G+P+ P G L++IR LRR+VV P + A TLW+A +AW PR+A + Sbjct 5 GRPVSPQVTEGQRALEEIREHLRRYVVLPGEETFTAVTLWVAATHLQKAWQHAPRLAVVG 64 Query 77 PEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPK-- 133 P GKSR L+V V P+ +N + A ++R + DP PT+L DE DTLFG Sbjct 65 PAKRCGKSRLLDVITESVHDPLITVNASAAAIYRSITEDP---PTLLVDEADTLFGSSKV 121 Query 134 AKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIV 193 A+++EE+RG++NAGH++ R + G E + P + ALAG+ DLPDTIM RS+V Sbjct 122 AEKNEELRGLLNAGHQRNRPTLR--VSGPNHEVTKHPTFAMAALAGIGDLPDTIMDRSVV 179 Query 194 VRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRR 249 +RMRRR P E V +R + P + D+LA W ++PL + PAMP V DR Sbjct 180 IRMRRRRPGEKVTEFRTFRDTPALHAVRDQLATW---LDPLHAKAMEMTPAMP--VQDRA 234 Query 250 ADVWESLVAVADTAGGHWPKTARATAETDA---TANRGAKPSIGVLLLRDIRRVFSDRDR 306 AD W+ LVAVAD AGG WP AR + AN S+G+ LL DIR F+ Sbjct 235 ADTWQPLVAVADLAGGPWPDLARTACQVMTEREAANEQDNGSLGIRLLADIRHAFTTEGN 294 Query 307 ---MRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGY 363 +RTS +L LN+ E PW + L RGL L YGI + G +GY Sbjct 295 PPALRTSRLLDILNQDAETPWPEYTV-NGLTPRGLQILLKEYGISSAVRRFHGNVQARGY 353 Query 364 SRTQFEDAWSRY 375 +R F D+W+RY Sbjct 354 ARLDFADSWARY 365 >gi|345000664|ref|YP_004803518.1| putative phiRv2 prophage protein [Streptomyces sp. SirexAA-E] gi|344316290|gb|AEN10978.1| putative phiRv2 prophage protein [Streptomyces sp. SirexAA-E] Length=436 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 149/372 (41%), Positives = 201/372 (55%), Gaps = 25/372 (6%) Query 18 EDGQPMPPV-GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLS 76 E+ +P PP G +L ++R +RR+VV PS A TLW+A AW PR+A + Sbjct 64 EESEPAPPSEGEAVLAELREQIRRYVVLPSGEAFTAVTLWVAATHLQTAWQHAPRLAVVG 123 Query 77 PEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRV-ADPVGRPTVLYDECDTLFGPK-- 133 P GKSR L+V V P+ +N + A +FR + A P PT+L DE DTLFG Sbjct 124 PAKRCGKSRLLDVITESVHDPLITVNASAAAVFRSITATP---PTLLVDEADTLFGSAKV 180 Query 134 AKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIV 193 A+++EE+RG++NAGH++ R + G E + P + ALAG+ DLPDTIM RSIV Sbjct 181 AEKNEEMRGLLNAGHQRNRPTLR--VSGPNHEVSKFPTFAMAALAGIGDLPDTIMDRSIV 238 Query 194 VRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRR 249 +RMRRR P E V +R + P L DRL W + P + PAMP V DR Sbjct 239 IRMRRRRPGEKVAEFRTFRDTPPLHALRDRLVAW---LTPRHAEAMELTPAMP--VEDRA 293 Query 250 ADVWESLVAVADTAGGHWPKTARATAETDA---TANRGAKPSIGVLLLRDIRRVFSDRDR 306 AD W+ LV+VAD AGG WP AR + A + + S+G+ LL DIRR F+ Sbjct 294 ADTWQPLVSVADLAGGAWPDLARTACQIMAKHEAEHDQDRSSLGIRLLADIRRAFTTEGN 353 Query 307 ---MRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGY 363 +RTS +L LN+ +E PW L RGL L Y I + G +G+ Sbjct 354 PPALRTSRLLDILNQDDEMPWAEYTTHG-LTPRGLQLLLKEYDISSVTRRFHGNVQARGF 412 Query 364 SRTQFEDAWSRY 375 +R QF D+W+RY Sbjct 413 TRLQFADSWARY 424 >gi|134103455|ref|YP_001109116.1| phiRv2 prophage protein [Saccharopolyspora erythraea prophage pSE211] gi|291006003|ref|ZP_06563976.1| phiRv2 prophage protein [Saccharopolyspora erythraea NRRL 2338] gi|133916078|emb|CAM06191.1| possible phiRv2 prophage protein [Saccharopolyspora erythraea NRRL 2338] Length=438 Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 142/356 (40%), Positives = 192/356 (54%), Gaps = 11/356 (3%) Query 23 MPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSG 82 P GA LLD++ A L +FV+ PS + A LWIA AW PR+ +PE G Sbjct 7 QPSDGAVLLDELHATLTKFVILPSPQAIDAVVLWIAATHAQPAWAHAPRLVIRAPEKRCG 66 Query 83 KSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRG 142 KSR L++ E P +N +P+ ++R ++D PT+L DE DT+FGP A +EE+RG Sbjct 67 KSRLLDIVEGTCHEPFLTVNASPSAVYRSISD--DPPTMLVDEADTIFGPDAGTNEEVRG 124 Query 143 VINAGHRKGAVAGRC-VIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAP 201 ++NAGH++ A R G++ E +P + ALAG+ +PDTI R+++VRMRRRAP Sbjct 125 LLNAGHQRNRPAKRYDAASGRV---ESIPTFAMAALAGIGAMPDTIEDRAVIVRMRRRAP 181 Query 202 TEPVEPWRPRVNGPEAEKLHDRLANWAAAINP-LESGWPAMPDGVTDRRADVWESLVAVA 260 E V P+R R + P L RLA W A P LE P MP + DR AD WE L+ VA Sbjct 182 GETVAPYRHRRDRPHLTALAKRLAAWLRASMPDLERAEPDMP--LEDRAADTWEPLIIVA 239 Query 261 DTAGGHWPKTAR-ATAETDATANRGAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRM 319 D AGG WP AR A + A A + S+ LL D R F D + T+++L LN Sbjct 240 DHAGGDWPTRARNAAVDLLAEAADNDQGSLRTRLLVDCRTAFGDHPTLSTTELLRQLNSD 299 Query 320 EEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRY 375 E PW + + L+A L+ L + I KGY R F DAW+RY Sbjct 300 PEAPWPTYGKTG-LNAAKLSKLLAEFDIRSANVRFPDGTQAKGYQRAHFFDAWTRY 354 >gi|256374331|ref|YP_003097991.1| hypothetical protein Amir_0174 [Actinosynnema mirum DSM 43827] gi|255918634|gb|ACU34145.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827] Length=383 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 147/376 (40%), Positives = 215/376 (58%), Gaps = 29/376 (7%) Query 20 GQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEP 79 QP P G +LD +R F++RF V+P +H LW AH W +A+ +TPR+ SPE Sbjct 11 AQPAP--GHVVLDQVRDFVKRFSVFPDEHCAPTLALWYAHTWVADAFYTTPRLVLSSPEA 68 Query 80 GSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEE 139 GSGK+R LE+ + L P + A L R VA G ++L DE DT+FG +EE Sbjct 69 GSGKTRVLEIAQHLTREPEMTAGGSAAALVRMVA--AGPISILMDEVDTVFGTGGAGNEE 126 Query 140 IRGVINAGHRKGAVAGRCVIRG---KIVETEELPAYCAVALAGLDD-LPDTIMSRSIVVR 195 +R ++N G+++ A + +G E LP + ALAGL +PDTI +R+I + Sbjct 127 VRQMLNLGYKRTATIPKT--KGDPASGFTVERLPIFAPAALAGLAGRMPDTITTRAITIH 184 Query 196 MRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAI--NPLESGWPAMPDGVTDRRADVW 253 +RRR EPVEP+R +A + + L +W A+I N +E+ P MP GV DR A++W Sbjct 185 LRRRRHDEPVEPYRESKVVRQATPIREALGDWTASIGENLIEAE-PDMPPGVEDRPAEIW 243 Query 254 ESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDR--DRMRTSD 311 E L+A+AD AGGHWP+TARA A + N+ + ++GV LL D+R +F+ +RM T++ Sbjct 244 EPLLAIADVAGGHWPETARA-ACSHFVLNQKSTQTLGVRLLDDLRALFTAEGTERMHTAE 302 Query 312 ILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGP-KFQHSGGEPPYKGY------- 363 I+T L +E+ PW + G PLD+R LA +L Y + P F+H KGY Sbjct 303 IVTRLRGLEDAPWADL-NGKPLDSRQLARQLSLYQVAPLTFKHKNTNA--KGYVTYPTNT 359 Query 364 --SRTQFEDAWSRYLS 377 ++ DAW+RYL+ Sbjct 360 QVTQVGLADAWARYLA 375 >gi|294630759|ref|ZP_06709319.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834092|gb|EFF92441.1| conserved hypothetical protein [Streptomyces sp. e14] Length=435 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 146/366 (40%), Positives = 203/366 (56%), Gaps = 22/366 (6%) Query 27 GAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRA 86 GAELL+++RA + ++VV PSD L A TLW+A PR+A + P G GKSR Sbjct 41 GAELLEELRAAIGKYVVLPSDEALTAVTLWVAATHIQGVLQHAPRLAVVGPTKGCGKSRV 100 Query 87 LEVTEPLVPRPVHAINCTPAYLFRRVA-DPVGRPTVLYDECDTLFGPKAKEHEEIRGVIN 145 L+V V +P+ +N + A LFR + DP T+L DE DT+F KA E+EE+RG++N Sbjct 101 LDVLHETVHQPIMTVNMSTAVLFRVIGKDPR---TILVDEADTVFS-KAGENEELRGLLN 156 Query 146 AGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPV 205 AGH++ A R I G + P + ALA + DLPDTI R++V+RM++R P E V Sbjct 157 AGHQRNRPAWR--ISGPEHKPTPYPTFAMAALASIGDLPDTITDRAVVLRMQKRKPGEKV 214 Query 206 EPWRPRVNGPEAEKLHDRLANWAAAINPLESG----WPAMPDGVTDRRADVWESLVAVAD 261 P+R R PE + D+LA W + PL P MP V DR AD WE LV +AD Sbjct 215 TPFRSRYATPELNSVRDKLAAW---LGPLRGTAGRMAPTMP--VEDRAADTWEPLVIIAD 269 Query 262 TAGGHWPKTARAT--AETDATANRGAKPSIGVLLLRDIRRVFS---DRDRMRTSDILTGL 316 AGGHWP +ARAT A T A + + ++ LLRDI RVF + + + + D++T L Sbjct 270 LAGGHWPASARATCVAMTRFEAVQDEQTNLKTRLLRDIHRVFEAHGNPEALSSLDLVTAL 329 Query 317 NRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRYL 376 + + PW + L+A L L +GI P KGY+R +F D+W+R+ Sbjct 330 LQDPDAPWAE-HGTNGLNAYHLGRMLRDFGIRPANYRFDKGRQAKGYARNRFLDSWARHC 388 Query 377 SADDET 382 ET Sbjct 389 LDLTET 394 Lambda K H 0.317 0.137 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1009956255448 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40