BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2663 Length=77 Score E Sequences producing significant alignments: (Bits) Value gi|15609800|ref|NP_217179.1| hypothetical protein Rv2663 [Mycoba... 155 3e-36 gi|339632675|ref|YP_004724317.1| hypothetical protein MAF_26670 ... 153 9e-36 gi|317124013|ref|YP_004098125.1| hypothetical protein Intca_0869... 96.3 2e-18 gi|320532218|ref|ZP_08033082.1| hypothetical protein HMPREF9057_... 88.2 4e-16 gi|343522524|ref|ZP_08759490.1| hypothetical protein HMPREF9058_... 80.1 1e-13 gi|226359551|ref|YP_002777329.1| hypothetical protein ROP_01370 ... 59.3 2e-07 gi|288923011|ref|ZP_06417166.1| hypothetical protein FrEUN1fDRAF... 49.7 1e-04 gi|315656656|ref|ZP_07909543.1| conserved hypothetical protein [... 49.3 2e-04 gi|315655430|ref|ZP_07908330.1| conserved hypothetical protein [... 48.9 3e-04 gi|296128074|ref|YP_003635324.1| hypothetical protein Cfla_0206 ... 44.7 0.004 gi|284043868|ref|YP_003394208.1| hypothetical protein Cwoe_2410 ... 42.7 0.017 gi|111027131|ref|YP_709109.1| hypothetical protein RHA1_ro11304 ... 42.0 0.027 gi|154509449|ref|ZP_02045091.1| hypothetical protein ACTODO_0198... 42.0 0.034 gi|333997701|ref|YP_004530313.1| hypothetical protein TREPR_2789... 40.8 0.063 gi|86740585|ref|YP_480985.1| hypothetical protein Francci3_1880 ... 39.7 0.15 gi|340358644|ref|ZP_08681156.1| hypothetical protein HMPREF9062_... 39.3 0.18 gi|25027812|ref|NP_737866.1| hypothetical protein CE1256 [Coryne... 39.3 0.19 gi|320094091|ref|ZP_08025906.1| hypothetical protein HMPREF9005_... 38.1 0.45 gi|226350060|ref|YP_002777173.1| hypothetical protein ROP_pROB02... 38.1 0.48 gi|322689020|ref|YP_004208754.1| hypothetical protein BLIF_0833 ... 37.0 0.86 gi|227548715|ref|ZP_03978764.1| conserved hypothetical protein [... 36.2 1.5 gi|227874755|ref|ZP_03992908.1| hypothetical protein HMPREF0577_... 36.2 1.9 gi|226349561|ref|YP_002776675.1| hypothetical protein ROP_pROB01... 35.8 2.1 gi|333993053|ref|YP_004525666.1| hypothetical protein TREAZ_2271... 35.8 2.3 gi|269976828|ref|ZP_06183803.1| conserved hypothetical protein [... 35.8 2.4 gi|334338334|ref|YP_004543486.1| hypothetical protein Isova_2907... 35.0 3.4 gi|269956397|ref|YP_003326186.1| hypothetical protein Xcel_1603 ... 35.0 3.5 gi|313235447|emb|CBY19724.1| unnamed protein product [Oikopleura... 34.7 5.0 gi|313217970|emb|CBY41333.1| unnamed protein product [Oikopleura... 34.3 6.2 gi|313243876|emb|CBY15923.1| unnamed protein product [Oikopleura... 34.3 6.7 gi|336426104|ref|ZP_08606117.1| hypothetical protein HMPREF0994_... 33.9 8.2 >gi|15609800|ref|NP_217179.1| hypothetical protein Rv2663 [Mycobacterium tuberculosis H37Rv] gi|15842202|ref|NP_337239.1| hypothetical protein MT2737 [Mycobacterium tuberculosis CDC1551] gi|31793834|ref|NP_856327.1| hypothetical protein Mb2681 [Mycobacterium bovis AF2122/97] 74 more sequence titles Length=77 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/77 (99%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 +EVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP Sbjct 1 MEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 Query 61 RIIHANVLRPKFYDYLR 77 RIIHANVLRPKFYDYLR Sbjct 61 RIIHANVLRPKFYDYLR 77 >gi|339632675|ref|YP_004724317.1| hypothetical protein MAF_26670 [Mycobacterium africanum GM041182] gi|339332031|emb|CCC27737.1| hypothetical protein MAF_26670 [Mycobacterium africanum GM041182] Length=77 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 75/77 (98%), Positives = 76/77 (99%), Gaps = 0/77 (0%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 +EVRASARKHGINDDAMLHAYRN LRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP Sbjct 1 MEVRASARKHGINDDAMLHAYRNVLRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 Query 61 RIIHANVLRPKFYDYLR 77 RIIHANVLRPKFYDYLR Sbjct 61 RIIHANVLRPKFYDYLR 77 >gi|317124013|ref|YP_004098125.1| hypothetical protein Intca_0869 [Intrasporangium calvum DSM 43043] gi|315588101|gb|ADU47398.1| hypothetical protein Intca_0869 [Intrasporangium calvum DSM 43043] Length=78 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/78 (65%), Positives = 61/78 (79%), Gaps = 1/78 (1%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELV-IPADEP 59 +EV SA KHGI+ + HA+ NA+R VE EY GE +LLVIGPDQ GR+LELV +PA +P Sbjct 1 MEVVRSALKHGIDTADIEHAWTNAIRLVEYEYDGEDRLLVIGPDQHGRMLELVAVPAGQP 60 Query 60 PRIIHANVLRPKFYDYLR 77 RIIHA+ LRPKF+DYLR Sbjct 61 TRIIHADRLRPKFFDYLR 78 >gi|320532218|ref|ZP_08033082.1| hypothetical protein HMPREF9057_00951 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135554|gb|EFW27638.1| hypothetical protein HMPREF9057_00951 [Actinomyces sp. oral taxon 171 str. F0337] Length=78 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/76 (64%), Positives = 54/76 (72%), Gaps = 1/76 (1%) Query 3 VRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELV-IPADEPPR 61 V SA KHG+ + HA+ NALR VE EY GE +LLVIGP LLELV +PA EP R Sbjct 3 VGWSALKHGVTRTDVEHAWTNALRLVEYEYEGEERLLVIGPAVDATLLELVAVPAAEPTR 62 Query 62 IIHANVLRPKFYDYLR 77 IIHA+ LRPKFYDYLR Sbjct 63 IIHADRLRPKFYDYLR 78 >gi|343522524|ref|ZP_08759490.1| hypothetical protein HMPREF9058_2121 [Actinomyces sp. oral taxon 175 str. F0384] gi|343401933|gb|EGV14439.1| hypothetical protein HMPREF9058_2121 [Actinomyces sp. oral taxon 175 str. F0384] Length=62 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/62 (70%), Positives = 47/62 (76%), Gaps = 1/62 (1%) Query 17 MLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELV-IPADEPPRIIHANVLRPKFYDY 75 M HA+ NALR VE EY GE +LLVIGP LLELV +PA EP RIIHA+ LRPKFYDY Sbjct 1 MEHAWTNALRLVEYEYEGEERLLVIGPAVDATLLELVAVPAAEPTRIIHADRLRPKFYDY 60 Query 76 LR 77 LR Sbjct 61 LR 62 >gi|226359551|ref|YP_002777329.1| hypothetical protein ROP_01370 [Rhodococcus opacus B4] gi|226238036|dbj|BAH48384.1| hypothetical protein [Rhodococcus opacus B4] Length=182 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/59 (55%), Positives = 40/59 (68%), Gaps = 1/59 (1%) Query 6 SARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELV-IPADEPPRII 63 SARKH I++ + HA+ NA+RY E E GE +LL+IG D GRLLE V PA EP R + Sbjct 6 SARKHHISNTDITHAFENAIRYAEYEDDGEERLLIIGTDTAGRLLEPVAAPAGEPNRRV 64 >gi|288923011|ref|ZP_06417166.1| hypothetical protein FrEUN1fDRAFT_6864 [Frankia sp. EUN1f] gi|288345629|gb|EFC80003.1| hypothetical protein FrEUN1fDRAFT_6864 [Frankia sp. EUN1f] Length=81 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 45/78 (58%), Gaps = 2/78 (2%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPA--DE 58 VE+ SARKHG+ D +LHA L L+ + L +GPD++G LLE+V+ D Sbjct 3 VEIHRSARKHGVADADLLHAATRYLVAFALDDENPRRELRLGPDRSGNLLEIVVLLLDDG 62 Query 59 PPRIIHANVLRPKFYDYL 76 II+A +RPK++ L Sbjct 63 TELIIYAMRMRPKYWGLL 80 >gi|315656656|ref|ZP_07909543.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492611|gb|EFU82215.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length=69 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/73 (39%), Positives = 41/73 (57%), Gaps = 5/73 (6%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 +E + SA KHG N + HA RNA R ++L+ E L +GP +G +LE++ D Sbjct 1 MEFKESAFKHGYNRTEITHAIRNAWRILDLD---EGVTLFLGPTPSGNILEILTNRDGT- 56 Query 61 RIIHANVLRPKFY 73 + HA RPKF+ Sbjct 57 -VFHAMQARPKFF 68 >gi|315655430|ref|ZP_07908330.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490370|gb|EFU79995.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length=69 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/73 (39%), Positives = 41/73 (57%), Gaps = 5/73 (6%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 +E + SA KHG N + HA RNA R ++L+ E L +GP +G +LE++ D Sbjct 1 MEFKESAFKHGYNRMEITHAIRNAWRILDLD---ESVTLFLGPTPSGNILEILTNRDGT- 56 Query 61 RIIHANVLRPKFY 73 + HA RPKF+ Sbjct 57 -VFHAMQARPKFF 68 >gi|296128074|ref|YP_003635324.1| hypothetical protein Cfla_0206 [Cellulomonas flavigena DSM 20109] gi|296019889|gb|ADG73125.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length=76 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/68 (39%), Positives = 45/68 (67%), Gaps = 4/68 (5%) Query 6 SARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLEL-VIPADEPPRIIH 64 SA +HG++++++ HA RN +V+L G+ +VIGPD++G L+E+ V+ + ++H Sbjct 10 SAYRHGVSEESIKHALRN---HVDLFDVGDGMTMVIGPDRSGGLIEVGVVERYDDLYVVH 66 Query 65 ANVLRPKF 72 A RPKF Sbjct 67 AMPARPKF 74 >gi|284043868|ref|YP_003394208.1| hypothetical protein Cwoe_2410 [Conexibacter woesei DSM 14684] gi|283948089|gb|ADB50833.1| hypothetical protein Cwoe_2410 [Conexibacter woesei DSM 14684] Length=79 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/79 (33%), Positives = 46/79 (59%), Gaps = 3/79 (3%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVI--PADE 58 +++ SARKHG+ D+ ++HA +AL ++ + + LV+GPD+ +LE+V+ + Sbjct 1 MKIHESARKHGVADEDIVHAIDHALVIDDIGEEPD-RWLVLGPDRAANMLEVVVLTTVEG 59 Query 59 PPRIIHANVLRPKFYDYLR 77 IHA +RP + LR Sbjct 60 TQLAIHAMRMRPAYEQLLR 78 >gi|111027131|ref|YP_709109.1| hypothetical protein RHA1_ro11304 [Rhodococcus jostii RHA1] gi|110825670|gb|ABH00951.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=77 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 40/69 (58%), Gaps = 5/69 (7%) Query 6 SARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLEL--VIPADEPPRII 63 SA KHGI+ + M+HA+ NA++ ++ E ++IGP + L+E+ V +D I+ Sbjct 10 SAYKHGIDSEDMVHAFNNAIKAYSVD---EGFAMLIGPGRDASLIEVGYVTSSDGAHVIV 66 Query 64 HANVLRPKF 72 HA R K+ Sbjct 67 HAMKARGKY 75 >gi|154509449|ref|ZP_02045091.1| hypothetical protein ACTODO_01980 [Actinomyces odontolyticus ATCC 17982] gi|153799083|gb|EDN81503.1| hypothetical protein ACTODO_01980 [Actinomyces odontolyticus ATCC 17982] Length=86 Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/80 (38%), Positives = 49/80 (62%), Gaps = 7/80 (8%) Query 5 ASARKH----GINDDAMLHAYRNALRYVELEYHGE-VQLLVIGPDQTGRLLELVIPADEP 59 ASARKH + D+++L+AY +AL L+ + + LV+G +Q+GR+LE+V+ + Sbjct 7 ASARKHFGRDRLTDESVLYAYEHALNSRPLDDEDDPRRWLVVGINQSGRVLEMVVLIFDS 66 Query 60 --PRIIHANVLRPKFYDYLR 77 +IHA RP+F + LR Sbjct 67 GGELLIHAMKARPQFLEELR 86 >gi|333997701|ref|YP_004530313.1| hypothetical protein TREPR_2789 [Treponema primitia ZAS-2] gi|333741188|gb|AEF86678.1| conserved hypothetical protein [Treponema primitia ZAS-2] Length=83 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 40/75 (54%), Gaps = 3/75 (4%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELV--IPADE 58 +E +A KHG+ + A+ +A + L LE + + LVIG D TG L+E+ I DE Sbjct 5 IEYNEAAFKHGVTETAIRYALWHPLHEQLLEAYKN-KWLVIGYDTTGNLIEVAYNIIDDE 63 Query 59 PPRIIHANVLRPKFY 73 + HA R KF+ Sbjct 64 TVNVFHAMPCRKKFF 78 >gi|86740585|ref|YP_480985.1| hypothetical protein Francci3_1880 [Frankia sp. CcI3] gi|86567447|gb|ABD11256.1| conserved hypothetical protein [Frankia sp. CcI3] Length=80 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/79 (37%), Positives = 42/79 (54%), Gaps = 3/79 (3%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHG-EVQLLVIGPDQTGRLLELVIPA--D 57 +E+ SARKHG+ D +LHA + L+ G + L +GP G LLE+V+ D Sbjct 1 MEIHRSARKHGVADADILHAAERYVVAYSLDDDGPPWRELRLGPGGAGNLLEIVVLLLDD 60 Query 58 EPPRIIHANVLRPKFYDYL 76 IIHA +R ++ D L Sbjct 61 GTELIIHAMRMRSQYRDLL 79 >gi|340358644|ref|ZP_08681156.1| hypothetical protein HMPREF9062_0281 [Actinomyces sp. oral taxon 448 str. F0400] gi|339886098|gb|EGQ75775.1| hypothetical protein HMPREF9062_0281 [Actinomyces sp. oral taxon 448 str. F0400] Length=78 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 39/67 (59%), Gaps = 6/67 (8%) Query 6 SARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPPRIIHA 65 SA KHG+ D + HA N + + Y+ E ++VIGP ++G LLE+ + + R+ HA Sbjct 14 SAFKHGVGRDDIDHALSNP---IVIHYY-EGYVMVIGPSRSGDLLEVAV--NVSGRVFHA 67 Query 66 NVLRPKF 72 RPK+ Sbjct 68 MKARPKY 74 >gi|25027812|ref|NP_737866.1| hypothetical protein CE1256 [Corynebacterium efficiens YS-314] gi|259506202|ref|ZP_05749104.1| toxin-antitoxin system, toxin component [Corynebacterium efficiens YS-314] gi|23493095|dbj|BAC18066.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166179|gb|EEW50733.1| toxin-antitoxin system, toxin component [Corynebacterium efficiens YS-314] Length=79 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/78 (35%), Positives = 43/78 (56%), Gaps = 2/78 (2%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 ++V SA KHGI ++ ++A AL +L+ + L +G DQ+GRLLE+V+ + Sbjct 1 MKVHKSALKHGIPEEDSIYAATWALWIEDLDEDSPARQLRLGFDQSGRLLEIVLLVFDSG 60 Query 61 R--IIHANVLRPKFYDYL 76 IIH+ RP + L Sbjct 61 NELIIHSMKARPHMKNLL 78 >gi|320094091|ref|ZP_08025906.1| hypothetical protein HMPREF9005_0518 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978982|gb|EFW10510.1| hypothetical protein HMPREF9005_0518 [Actinomyces sp. oral taxon 178 str. F0338] Length=80 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/66 (38%), Positives = 37/66 (57%), Gaps = 3/66 (4%) Query 3 VRASARKHGINDDAMLHAYRNALRYV-ELEYHGEVQLLVIGPDQTGRLLELVI--PADEP 59 +R SA KHGI+++A + A N R+ L+ + +G DQ+ R LELV+ D+ Sbjct 3 LRPSALKHGISEEAAVFAATNGCRFTASLDDDHPQREFRLGFDQSMRFLELVVLRWDDQT 62 Query 60 PRIIHA 65 IIHA Sbjct 63 EEIIHA 68 >gi|226350060|ref|YP_002777173.1| hypothetical protein ROP_pROB02-02290 [Rhodococcus opacus B4] gi|226245972|dbj|BAH47236.1| hypothetical protein [Rhodococcus opacus B4] Length=91 Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/89 (39%), Positives = 46/89 (52%), Gaps = 15/89 (16%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEY-------HGEVQLLVIGPDQT--GRLLE 51 +E SA KHGI+ D LHA NA+ YVE E+ H + L IGP +T G LLE Sbjct 3 IEWATSADKHGIDRDDALHAIENAV-YVEQEFDEPRVPGHSK-PWLFIGPPRTLGGPLLE 60 Query 52 LVIPADEPPR---IIHANVLRPKFYDYLR 77 +++ PPR + H R K D ++ Sbjct 61 VMVEI-VPPRGMVVFHVMQARQKHLDRMK 88 >gi|322689020|ref|YP_004208754.1| hypothetical protein BLIF_0833 [Bifidobacterium longum subsp. infantis 157F] gi|320460356|dbj|BAJ70976.1| hypothetical protein BLIF_0833 [Bifidobacterium longum subsp. infantis 157F] Length=88 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 23/73 (32%), Positives = 39/73 (54%), Gaps = 2/73 (2%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPP 60 V+ R R ++ D++ A+ N +R++ E ++ + +G D+ GRLLE+V DE Sbjct 8 VDPRIQTRHPDVSADSVRVAWSNVVRFMAREDTDPLRYVAVGYDEYGRLLEMVAVLDESD 67 Query 61 R--IIHANVLRPK 71 R + HA PK Sbjct 68 RWHVFHAMRATPK 80 >gi|227548715|ref|ZP_03978764.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079208|gb|EEI17171.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=80 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 41/78 (53%), Gaps = 3/78 (3%) Query 3 VRASARKHGINDDAMLHAYRNALRYVELEYH-GEVQLLVIGPDQTGRLLE--LVIPADEP 59 V ASA KHGI+++ +HA L+ + + L +G D RLLE +V+ +D Sbjct 3 VAASATKHGISEEDGIHAALFPTWVAPLDDDPAQWRELRLGFDTHARLLETVVVVASDGD 62 Query 60 PRIIHANVLRPKFYDYLR 77 +IHA R K+ D LR Sbjct 63 ELLIHAMKARSKYVDLLR 80 >gi|227874755|ref|ZP_03992908.1| hypothetical protein HMPREF0577_0209 [Mobiluncus mulieris ATCC 35243] gi|227844530|gb|EEJ54686.1| hypothetical protein HMPREF0577_0209 [Mobiluncus mulieris ATCC 35243] Length=86 Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 35/72 (49%), Gaps = 5/72 (6%) Query 2 EVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPPR 61 E+R SA KHGI++ + HA RN L + L+IG G +LE I Sbjct 19 EIRDSAYKHGISESDIRHALRNPL---AARWGNHDMYLLIGAASDGSVLE--IGFGTTGA 73 Query 62 IIHANVLRPKFY 73 I+HA R K++ Sbjct 74 IVHAMKARAKYW 85 >gi|226349561|ref|YP_002776675.1| hypothetical protein ROP_pROB01-03240 [Rhodococcus opacus B4] gi|226245476|dbj|BAH55823.1| hypothetical protein [Rhodococcus opacus B4] Length=91 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/62 (46%), Positives = 36/62 (59%), Gaps = 9/62 (14%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYH-----GEVQ-LLVIGPDQT--GRLLEL 52 VE SA KHGI+ + LHA NAL YVE E+ G + L IGP +T G LLE+ Sbjct 3 VEWANSADKHGIDHEDALHAIENAL-YVEQEFDEPRVPGHAKPWLFIGPPRTLGGPLLEV 61 Query 53 VI 54 ++ Sbjct 62 MV 63 >gi|333993053|ref|YP_004525666.1| hypothetical protein TREAZ_2271 [Treponema azotonutricium ZAS-9] gi|333735813|gb|AEF81762.1| conserved hypothetical protein [Treponema azotonutricium ZAS-9] Length=83 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/78 (34%), Positives = 41/78 (53%), Gaps = 3/78 (3%) Query 1 VEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIP-ADEP 59 +E +A KHG + + A++ LR V +E + + LVIG DQ G ++E++ DE Sbjct 5 IEFNPAAFKHGYTEADIQWAFKTQLRDVLMEGF-DNKYLVIGFDQAGNIIEVMYNRIDEK 63 Query 60 P-RIIHANVLRPKFYDYL 76 + HA R +F D L Sbjct 64 SVNVFHAMKARQQFLDGL 81 >gi|269976828|ref|ZP_06183803.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] gi|269935025|gb|EEZ91584.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] Length=97 Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 35/72 (49%), Gaps = 5/72 (6%) Query 2 EVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPPR 61 E+R SA KHGI++ + HA RN L + L+IG G +LE I Sbjct 30 EIRDSAYKHGISESDIRHALRNPL---AARWGNHDMYLLIGAASDGSVLE--IGFGTTGA 84 Query 62 IIHANVLRPKFY 73 I+HA R K++ Sbjct 85 IVHAMKARAKYW 96 >gi|334338334|ref|YP_004543486.1| hypothetical protein Isova_2907 [Isoptericola variabilis 225] gi|334108702|gb|AEG45592.1| hypothetical protein Isova_2907 [Isoptericola variabilis 225] Length=85 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/80 (37%), Positives = 46/80 (58%), Gaps = 11/80 (13%) Query 6 SARKH----GINDDAMLHAYRNALRYVELEYHGE-VQLLVIGPDQTGRLLELVI----PA 56 SARKH + + +L+A +++L V L+ + + L++G D +GR+LELV+ Sbjct 7 SARKHFRRDRLTEAGVLYAAQHSLYQVPLDDEDDPRRWLMLGFDDSGRMLELVVLVFDSG 66 Query 57 DEPPRIIHANVLRPKFYDYL 76 DE IIHA RP++ D L Sbjct 67 DEL--IIHAMKARPQYLDLL 84 >gi|269956397|ref|YP_003326186.1| hypothetical protein Xcel_1603 [Xylanimonas cellulosilytica DSM 15894] gi|269305078|gb|ACZ30628.1| hypothetical protein Xcel_1603 [Xylanimonas cellulosilytica DSM 15894] Length=62 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/57 (39%), Positives = 32/57 (57%), Gaps = 7/57 (12%) Query 17 MLHAYRNALRYVELEYHGEVQLLV-IGPDQTGRLLELVIPADEPPRIIHANVLRPKF 72 + HA RN L E G L++ +GPD +G L+E+ + D PRI+H RP+F Sbjct 6 LCHALRNYLDVFE----GRSDLVMYVGPDLSGNLIEVGVSDD--PRIVHGMPARPQF 56 >gi|313235447|emb|CBY19724.1| unnamed protein product [Oikopleura dioica] Length=676 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 15/38 (40%), Positives = 23/38 (61%), Gaps = 0/38 (0%) Query 5 ASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIG 42 A R HG++ + + A NALRYV+ YH E++ +G Sbjct 29 APKRVHGLDSEEIEQALSNALRYVDSAYHDELRTEFLG 66 >gi|313217970|emb|CBY41333.1| unnamed protein product [Oikopleura dioica] Length=467 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/38 (40%), Positives = 23/38 (61%), Gaps = 0/38 (0%) Query 5 ASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIG 42 A R HG++ + + A NALRYV+ YH E++ +G Sbjct 29 APKRVHGLDSEEIEQALSNALRYVDSAYHDELRTEFLG 66 >gi|313243876|emb|CBY15923.1| unnamed protein product [Oikopleura dioica] Length=1696 Score = 34.3 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 15/38 (40%), Positives = 23/38 (61%), Gaps = 0/38 (0%) Query 5 ASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIG 42 A R HG++ + + A NALRYV+ YH E++ +G Sbjct 1400 APKRVHGLDSEEIEQALSNALRYVDSAYHDELRTEFLG 1437 >gi|336426104|ref|ZP_08606117.1| hypothetical protein HMPREF0994_02123 [Lachnospiraceae bacterium 3_1_57FAA_CT1] gi|336011062|gb|EGN41030.1| hypothetical protein HMPREF0994_02123 [Lachnospiraceae bacterium 3_1_57FAA_CT1] Length=326 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 15/41 (37%), Positives = 23/41 (57%), Gaps = 1/41 (2%) Query 8 RKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGR 48 ++ GI+ D + +RN L Y E YHGE + +G D G+ Sbjct 128 QRRGISSDVISRCFRNGLFY-EARYHGEPVCVFVGKDNAGK 167 Lambda K H 0.323 0.143 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130175841596 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40