BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2673 Length=433 Score E Sequences producing significant alignments: (Bits) Value gi|15609810|ref|NP_217189.1| integral membrane protein [Mycobact... 848 0.0 gi|306776953|ref|ZP_07415290.1| conserved membrane protein [Myco... 847 0.0 gi|308374657|ref|ZP_07436880.2| conserved membrane protein [Myco... 839 0.0 gi|308372363|ref|ZP_07428398.2| conserved membrane protein [Myco... 814 0.0 gi|240169732|ref|ZP_04748391.1| transmembrane protein [Mycobacte... 725 0.0 gi|289570852|ref|ZP_06451079.1| conserved hypothetical protein [... 711 0.0 gi|183982056|ref|YP_001850347.1| transmembrane protein [Mycobact... 708 0.0 gi|118618637|ref|YP_906969.1| transmembrane protein [Mycobacteri... 705 0.0 gi|254818550|ref|ZP_05223551.1| hypothetical protein MintA_01431... 694 0.0 gi|254551728|ref|ZP_05142175.1| hypothetical protein Mtube_14937... 671 0.0 gi|342858456|ref|ZP_08715111.1| hypothetical protein MCOL_06261 ... 661 0.0 gi|296171940|ref|ZP_06852985.1| transmembrane protein [Mycobacte... 655 0.0 gi|15827696|ref|NP_301959.1| integral membrane protein [Mycobact... 651 0.0 gi|41408891|ref|NP_961727.1| hypothetical protein MAP2793 [Mycob... 651 0.0 gi|289444215|ref|ZP_06433959.1| integral membrane protein [Mycob... 650 0.0 gi|108799184|ref|YP_639381.1| hypothetical protein Mmcs_2217 [My... 590 2e-166 gi|126434792|ref|YP_001070483.1| hypothetical protein Mjls_2206 ... 581 7e-164 gi|333991059|ref|YP_004523673.1| transmembrane protein [Mycobact... 561 6e-158 gi|118469940|ref|YP_887116.1| integral membrane protein [Mycobac... 556 2e-156 gi|120403477|ref|YP_953306.1| putative integral membrane protein... 553 2e-155 gi|145224496|ref|YP_001135174.1| hypothetical protein Mflv_3915 ... 543 2e-152 gi|315444827|ref|YP_004077706.1| hypothetical protein Mspyr1_326... 540 3e-151 gi|298526143|ref|ZP_07013552.1| transmembrane protein [Mycobacte... 532 5e-149 gi|289570847|ref|ZP_06451074.1| predicted protein [Mycobacterium... 498 7e-139 gi|169630061|ref|YP_001703710.1| hypothetical protein MAB_2978 [... 496 4e-138 gi|333919453|ref|YP_004493034.1| integral membrane protein [Amyc... 415 1e-113 gi|54025704|ref|YP_119946.1| hypothetical protein nfa37340 [Noca... 414 1e-113 gi|226306342|ref|YP_002766302.1| arabinosyltransferase AftC [Rho... 406 4e-111 gi|229491269|ref|ZP_04385095.1| conserved hypothetical protein [... 404 2e-110 gi|312139473|ref|YP_004006809.1| integral membrane protein [Rhod... 400 2e-109 gi|325672637|ref|ZP_08152333.1| integral membrane protein [Rhodo... 400 2e-109 gi|111023821|ref|YP_706793.1| hypothetical protein RHA1_ro06863 ... 388 9e-106 gi|296139605|ref|YP_003646848.1| hypothetical protein Tpau_1896 ... 384 2e-104 gi|226366257|ref|YP_002784040.1| arabinosyltransferase AftC [Rho... 382 4e-104 gi|326384413|ref|ZP_08206093.1| hypothetical protein SCNU_15814 ... 365 6e-99 gi|343924654|ref|ZP_08764198.1| arabinosyltransferase AftC [Gord... 362 8e-98 gi|262202201|ref|YP_003273409.1| hypothetical protein Gbro_2268 ... 355 8e-96 gi|319948482|ref|ZP_08022616.1| hypothetical protein ES5_03888 [... 314 2e-83 gi|259507402|ref|ZP_05750302.1| membrane protein [Corynebacteriu... 280 3e-73 gi|25028346|ref|NP_738400.1| hypothetical protein CE1790 [Coryne... 280 3e-73 gi|317507235|ref|ZP_07964984.1| hypothetical protein HMPREF9336_... 269 6e-70 gi|336325716|ref|YP_004605682.1| arabinofuranosyl transferase C ... 266 5e-69 gi|62390736|ref|YP_226138.1| hypothetical protein cg2077 [Coryne... 263 3e-68 gi|145295801|ref|YP_001138622.1| hypothetical protein cgR_1726 [... 263 4e-68 gi|296394057|ref|YP_003658941.1| hypothetical protein Srot_1649 ... 261 1e-67 gi|19553101|ref|NP_601103.1| hypothetical protein NCgl1822 [Cory... 256 5e-66 gi|344044032|gb|EGV39713.1| hypothetical protein CgS9114_11027 [... 256 6e-66 gi|334564732|ref|ZP_08517723.1| hypothetical protein CbovD2_0915... 255 1e-65 gi|337290912|ref|YP_004629933.1| arabinofuranosyl transferase C ... 251 2e-64 gi|334697025|gb|AEG81822.1| arabinofuranosyl transferase C [Cory... 247 3e-63 >gi|15609810|ref|NP_217189.1| integral membrane protein [Mycobacterium tuberculosis H37Rv] gi|15842211|ref|NP_337248.1| hypothetical protein MT2747 [Mycobacterium tuberculosis CDC1551] gi|31793845|ref|NP_856338.1| integral membrane protein [Mycobacterium bovis AF2122/97] 59 more sequence titles Length=433 Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/433 (99%), Positives = 433/433 (100%), Gaps = 0/433 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG Sbjct 1 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL Sbjct 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL Sbjct 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL Sbjct 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI Sbjct 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 Query 421 DPAWLTPEREGQR 433 DPAWLTPEREGQR Sbjct 421 DPAWLTPEREGQR 433 >gi|306776953|ref|ZP_07415290.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306973066|ref|ZP_07485727.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307080774|ref|ZP_07489944.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308214610|gb|EFO74009.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308357540|gb|EFP46391.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308361488|gb|EFP50339.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] Length=433 Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/433 (99%), Positives = 433/433 (100%), Gaps = 0/433 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG Sbjct 1 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL Sbjct 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL Sbjct 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL Sbjct 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADN+LDGGI Sbjct 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNQLDGGI 420 Query 421 DPAWLTPEREGQR 433 DPAWLTPEREGQR Sbjct 421 DPAWLTPEREGQR 433 >gi|308374657|ref|ZP_07436880.2| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308341166|gb|EFP30017.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] Length=428 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/428 (99%), Positives = 428/428 (100%), Gaps = 0/428 (0%) Query 6 VTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD 65 +TAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD Sbjct 1 MTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD 60 Query 66 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA 125 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA Sbjct 61 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA 120 Query 126 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL 185 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL Sbjct 121 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL 180 Query 186 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSD 245 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSD Sbjct 181 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSD 240 Query 246 PMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYR 305 PMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYR Sbjct 241 PMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYR 300 Query 306 TGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGF 365 TGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGF Sbjct 301 TGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGF 360 Query 366 MTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 MTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL Sbjct 361 MTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 420 Query 426 TPEREGQR 433 TPEREGQR Sbjct 421 TPEREGQR 428 >gi|308372363|ref|ZP_07428398.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308333426|gb|EFP22277.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|339299153|gb|AEJ51263.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180] Length=414 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/414 (99%), Positives = 414/414 (100%), Gaps = 0/414 (0%) Query 20 LLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG 79 +LAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG Sbjct 1 MLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG 60 Query 80 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN 139 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN Sbjct 61 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN 120 Query 140 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI 199 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI Sbjct 121 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI 180 Query 200 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG 259 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG Sbjct 181 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG 240 Query 260 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV 319 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV Sbjct 241 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV 300 Query 320 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW 379 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW Sbjct 301 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW 360 Query 380 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR 433 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR Sbjct 361 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR 414 >gi|240169732|ref|ZP_04748391.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=433 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/433 (90%), Positives = 407/433 (94%), Gaps = 0/433 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAAD+ RT L S+LA FRPRTGAPSTA+I+R+ALWPAA++S+LHRSIVLTTNG Sbjct 1 MYGALVTAADTTRTRLRESMLAAFRPRTGAPSTASIVRAALWPAAIMSILHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFR GWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRHGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINT AIL AAYLLLR FNFTLTSVAAPAL+LAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTLAILAAAYLLLRTFNFTLTSVAAPALLLAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR SRQW GLAIGLTLVLKPLLGPLLLLPLLNRQWRA++AA+VVPVVVN+AAL Sbjct 181 LRWLLDGRTSRQWMAGLAIGLTLVLKPLLGPLLLLPLLNRQWRAVLAAIVVPVVVNLAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVS PM FFTRTLPYILGTRDYFNSSI GNGVYFGLPTWLI+FLR+LFTA+ +LWLL Sbjct 241 PLVSHPMDFFTRTLPYILGTRDYFNSSIQGNGVYFGLPTWLIVFLRLLFTALAIASLWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL Sbjct 301 YRYYRTRDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 +YGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKA+NRL GI Sbjct 361 AIYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKAENRLGAGI 420 Query 421 DPAWLTPEREGQR 433 DP WLT ERE R Sbjct 421 DPTWLTAERERAR 433 >gi|289570852|ref|ZP_06451079.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289544606|gb|EFD48254.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=361 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/361 (99%), Positives = 361/361 (100%), Gaps = 0/361 (0%) Query 73 VLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAY 132 +LNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAY Sbjct 1 MLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAY 60 Query 133 LLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQ 192 LLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQ Sbjct 61 LLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQ 120 Query 193 WCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTR 252 WCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTR Sbjct 121 WCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTR 180 Query 253 TLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFW 312 TLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFW Sbjct 181 TLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFW 240 Query 313 FTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWL 372 FTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWL Sbjct 241 FTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWL 300 Query 373 LFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQ 432 LFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQ Sbjct 301 LFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQ 360 Query 433 R 433 R Sbjct 361 R 361 >gi|183982056|ref|YP_001850347.1| transmembrane protein [Mycobacterium marinum M] gi|183175382|gb|ACC40492.1| conserved transmembrane protein [Mycobacterium marinum M] Length=436 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/430 (88%), Positives = 401/430 (94%), Gaps = 0/430 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADS RTGL + A FRPRTG PS + ILRS LWPAA+LSVLHR+IVLTTNG Sbjct 1 MYGALVTAADSTRTGLRECMQAAFRPRTGPPSASAILRSVLWPAAILSVLHRAIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAIL+AAYLLLR+FNFTLTSVAAPAL+LAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILLAAYLLLRLFNFTLTSVAAPALVLAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR S QW G+AIG TLVLKPLLGPLLLLPLLNRQWR LV A+V+P+V+N+AAL Sbjct 181 LRWLLDGRVSHQWWAGIAIGFTLVLKPLLGPLLLLPLLNRQWRTLVTAIVIPIVINLAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PL++ PM FFTRTLPYILGTRDYFNSSI GNG+YFGLPTWLILFLR+LFTAI +LWLL Sbjct 241 PLINHPMDFFTRTLPYILGTRDYFNSSIQGNGIYFGLPTWLILFLRLLFTAIAIASLWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DPLFWFTTSSGVLLLWSWL MSLAQGYYSMMLFPFLMT+ L NSVIRNWPAWL Sbjct 301 YRYYRTRDPLFWFTTSSGVLLLWSWLAMSLAQGYYSMMLFPFLMTITLRNSVIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKA++RLD GI Sbjct 361 GIYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKAEDRLDSGI 420 Query 421 DPAWLTPERE 430 DPAWLT ERE Sbjct 421 DPAWLTAERE 430 >gi|118618637|ref|YP_906969.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118570747|gb|ABL05498.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=436 Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/430 (88%), Positives = 400/430 (94%), Gaps = 0/430 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADS RTGL + A FRPRTG PS + ILRS LWPAA+LSVLHR+IVLTTNG Sbjct 1 MYGALVTAADSTRTGLRECMQAAFRPRTGPPSASAILRSVLWPAAILSVLHRAIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAIL+AAYLLLR+FNFTLTSVAAPAL+LAMF TETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILLAAYLLLRLFNFTLTSVAAPALVLAMFTTETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR S QW G+AIG TLVLKPLLGPLLLLPLLNRQWR LV A+V+P+V+N+AAL Sbjct 181 LRWLLDGRVSHQWWAGIAIGFTLVLKPLLGPLLLLPLLNRQWRTLVTAIVIPIVINLAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PL++ PM FFTRTLPYILGTRDYFNSSI GNG+YFGLPTWLILFLR+LFTAI +LWLL Sbjct 241 PLINHPMDFFTRTLPYILGTRDYFNSSIQGNGIYFGLPTWLILFLRLLFTAIAIASLWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DPLFWFTTSSGVLLLWSWL MSLAQGYYSMMLFPFLMT+ L NSVIRNWPAW+ Sbjct 301 YRYYRTRDPLFWFTTSSGVLLLWSWLAMSLAQGYYSMMLFPFLMTITLRNSVIRNWPAWM 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKA++RLD GI Sbjct 361 GIYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKAEDRLDSGI 420 Query 421 DPAWLTPERE 430 DPAWLT ERE Sbjct 421 DPAWLTAERE 430 >gi|254818550|ref|ZP_05223551.1| hypothetical protein MintA_01431 [Mycobacterium intracellulare ATCC 13950] Length=436 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/430 (85%), Positives = 387/430 (90%), Gaps = 0/430 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAA+SIRTG LL FRPRTGAPS A+ILRSALWP A+LSVLHRSIV+TTNG Sbjct 1 MYGALVTAAESIRTGSRERLLTAFRPRTGAPSVASILRSALWPIAILSVLHRSIVITTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAV+NFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLP PSRYLFI Sbjct 61 NITDDFKPVYRAVVNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPEYPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 INT AIL A YLLLRMFN+TL+SVAAPAL+LAMF TETVTNTLVFTNINGC+LL E+LF Sbjct 121 LINTVAILAAWYLLLRMFNYTLSSVAAPALLLAMFCTETVTNTLVFTNINGCVLLAEMLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR RQW G+AIGLTL LKP+L PLLLLP+LNRQWR LV A V+PVVVN AA Sbjct 181 LRWLLDGRIGRQWWAGVAIGLTLTLKPVLLPLLLLPVLNRQWRTLVPAFVIPVVVNAAAW 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPM F TRT+PY LGTRDYFNSSI GNGVYFGLPTWLI+FLRILFT + GALWLL Sbjct 241 PLVSDPMDFVTRTVPYFLGTRDYFNSSIEGNGVYFGLPTWLIVFLRILFTLLAIGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YR+YRT DP FW T S+GVLLLWS+LV SLAQGYYSMMLFPFLMTVVLPNS+IRNWPAWL Sbjct 301 YRHYRTRDPRFWLTNSAGVLLLWSFLVSSLAQGYYSMMLFPFLMTVVLPNSLIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIV FTVLYFRYLDAKA+NRLD GI Sbjct 361 GIYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVVFTVLYFRYLDAKAENRLDDGI 420 Query 421 DPAWLTPERE 430 DPAWL ER+ Sbjct 421 DPAWLMTERQ 430 >gi|254551728|ref|ZP_05142175.1| hypothetical protein Mtube_14937 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=343 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/343 (100%), Positives = 343/343 (100%), Gaps = 0/343 (0%) Query 91 DPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPAL 150 DPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPAL Sbjct 1 DPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPAL 60 Query 151 ILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLG 210 ILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLG Sbjct 61 ILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLG 120 Query 211 PLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILG 270 PLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILG Sbjct 121 PLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILG 180 Query 271 NGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSL 330 NGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSL Sbjct 181 NGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSL 240 Query 331 AQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITY 390 AQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITY Sbjct 241 AQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITY 300 Query 391 GWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR 433 GWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR Sbjct 301 GWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR 343 >gi|342858456|ref|ZP_08715111.1| hypothetical protein MCOL_06261 [Mycobacterium colombiense CECT 3035] gi|342134160|gb|EGT87340.1| hypothetical protein MCOL_06261 [Mycobacterium colombiense CECT 3035] Length=447 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/432 (82%), Positives = 384/432 (89%), Gaps = 0/432 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAA+S RTGL LA F PRTGAPS AT+LR ALWP A+ SVLHRSI+LT NG Sbjct 1 MYGALVTAAESTRTGLRDRTLAAFGPRTGAPSVATVLRMALWPLAIFSVLHRSIILTLNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFR GWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPF PSR+LFI Sbjct 61 NITDDFKPVYRAVLNFRHGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFTPSRFLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 +INT AIL+A YLLLRMF FTL+SVAAPAL+LAMF TE+VT+TLVFTNINGC+LL E+LF Sbjct 121 AINTVAILIAWYLLLRMFKFTLSSVAAPALLLAMFCTESVTSTLVFTNINGCVLLAEMLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR SRQW GLAIGLTL LKP+LGPLLLLPLLNRQWR LV A+ VPVVVN+AA Sbjct 181 LRWLLDGRVSRQWWAGLAIGLTLTLKPVLGPLLLLPLLNRQWRTLVPAIAVPVVVNLAAW 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPM F T+TLPYI GTRDYFNSSI GNGVYFGLPTWLI+F+RI+F IT GALWLL Sbjct 241 PLVSDPMDFVTKTLPYIGGTRDYFNSSIEGNGVYFGLPTWLIVFMRIMFVLITIGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DPLFWFT+SSGVLLL SWLV+ LAQGYYSMMLFPFLMTVVL NS+IRNWPAWL Sbjct 301 YRYYRTRDPLFWFTSSSGVLLLCSWLVLPLAQGYYSMMLFPFLMTVVLRNSLIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLD WL++ MR+GRAL YLKITYGWSLLLIV FTVL FRYLDA+A+NRLD GI Sbjct 361 GIYGFMTLDDWLIYRAMRYGRALHYLKITYGWSLLLIVAFTVLLFRYLDARAENRLDDGI 420 Query 421 DPAWLTPEREGQ 432 DP WLT ERE + Sbjct 421 DPEWLTAERERE 432 >gi|296171940|ref|ZP_06852985.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893873|gb|EFG73645.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=436 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/431 (83%), Positives = 380/431 (89%), Gaps = 0/431 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADS RTGL +LA FRPR G PSTATILRSALWP A+ SVLHRSI+LT NG Sbjct 1 MYGALVTAADSTRTGLRDWILAAFRPRNGPPSTATILRSALWPVAIFSVLHRSIILTLNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFR GWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYL F PSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRHGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLSFTPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 INT AIL+A YLLLR+FN+TL+SVAAPAL+LAMF TE+VT+TLVFTNINGC+LL EVLF Sbjct 121 LINTIAILIAWYLLLRLFNYTLSSVAAPALLLAMFCTESVTSTLVFTNINGCVLLAEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDG+ QW GL IGLTL LKP+LGPLLLLPLLNRQWRAL+ A VVP VVN A Sbjct 181 LRWLLDGKVGHQWWAGLVIGLTLTLKPVLGPLLLLPLLNRQWRALIPAFVVPAVVNAVAW 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPM F T+TLPYI GTRDYFNSSI GNGVYFGLPTWLI+FLR+LF IT GALWLL Sbjct 241 PLVSDPMDFVTKTLPYIGGTRDYFNSSIEGNGVYFGLPTWLIVFLRVLFVLITIGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DPLFWFTTSSGVLLL SWLV+ LAQGYYSMMLFPFLMTVVL NS+IRNWPAWL Sbjct 301 YRYYRTRDPLFWFTTSSGVLLLCSWLVLPLAQGYYSMMLFPFLMTVVLKNSLIRNWPAWL 360 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLD WL++ +MR+GRAL YLKITYGWSLLLIV FTVL FRYLDAKA+NRLD GI Sbjct 361 GIYGFMTLDDWLIYKYMRYGRALHYLKITYGWSLLLIVAFTVLLFRYLDAKAENRLDEGI 420 Query 421 DPAWLTPEREG 431 DPAWLT R G Sbjct 421 DPAWLTARRVG 431 >gi|15827696|ref|NP_301959.1| integral membrane protein [Mycobacterium leprae TN] gi|221230173|ref|YP_002503589.1| hypothetical protein MLBr_01338 [Mycobacterium leprae Br4923] gi|2065236|emb|CAB08294.1| hypothetical protein MLC1351.25 [Mycobacterium leprae] gi|13093247|emb|CAC31719.1| possible conserved integral membrane protein [Mycobacterium leprae] gi|219933280|emb|CAR71433.1| possible conserved integral membrane protein [Mycobacterium leprae Br4923] Length=440 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/434 (83%), Positives = 389/434 (90%), Gaps = 4/434 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADS +TGL LLA F PRT PSTATI+RSALWPAA+LSVLHRS V+TTNG Sbjct 1 MYGALVTAADSTQTGLRNWLLAVFHPRTHTPSTATIVRSALWPAAILSVLHRSTVITTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFR GWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRHGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 INT AIL+A YL+LR+F +TL+SVAAP L+LAMF TETVT+TLVFTNINGCI+LLEVLF Sbjct 121 LINTGAILIAWYLILRLFKYTLSSVAAPTLLLAMFCTETVTSTLVFTNINGCIMLLEVLF 180 Query 181 LRWLLDGRA----SRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVN 236 L WL++G S+QW G AIGLTLVLKPLLGPLL LPLLNRQW+ALV A+ +PVV+N Sbjct 181 LWWLINGSEPKTVSQQWWAGGAIGLTLVLKPLLGPLLCLPLLNRQWQALVPAIALPVVIN 240 Query 237 VAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGA 296 +AALPLVS PM FFTRT+PYILGTRDYFNSSI GNGVYFGLPTWLI+FLR+LFT + + Sbjct 241 LAALPLVSHPMDFFTRTVPYILGTRDYFNSSIEGNGVYFGLPTWLIVFLRLLFTVLAICS 300 Query 297 LWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNW 356 LWLL RYYRT DPLFWFT S+GVLLLWSWLV+ LAQGYYSMMLFPFLMTVVLPNS+IRNW Sbjct 301 LWLLNRYYRTRDPLFWFTCSTGVLLLWSWLVLPLAQGYYSMMLFPFLMTVVLPNSLIRNW 360 Query 357 PAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRL 416 PAWLG+YGF+TLDRWLLFNWMR+GRALEYLKITYGWSLLLIV TVL FRYLDAKA+NRL Sbjct 361 PAWLGIYGFLTLDRWLLFNWMRYGRALEYLKITYGWSLLLIVVSTVLCFRYLDAKAENRL 420 Query 417 DGGIDPAWLTPERE 430 D GIDPAWLT ERE Sbjct 421 DHGIDPAWLTAERE 434 >gi|41408891|ref|NP_961727.1| hypothetical protein MAP2793 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466550|ref|YP_882743.1| hypothetical protein MAV_3565 [Mycobacterium avium 104] gi|254776007|ref|ZP_05217523.1| hypothetical protein MaviaA2_15245 [Mycobacterium avium subsp. avium ATCC 25291] gi|41397250|gb|AAS05110.1| hypothetical protein MAP_2793 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167837|gb|ABK68734.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458828|gb|EGO37785.1| Protein of unknown function (DUF2029) [Mycobacterium avium subsp. paratuberculosis S397] Length=428 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/430 (83%), Positives = 384/430 (90%), Gaps = 2/430 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAA+S TGL + A FRPRT APS AT+LRSALWP A+ SVLHRSIV+TTNG Sbjct 1 MYGALVTAAES--TGLRDWIQAAFRPRTSAPSVATVLRSALWPIAIFSVLHRSIVVTTNG 58 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLP PSRYLFI Sbjct 59 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPEYPSRYLFI 118 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 INT AIL+A YLLLR+F +TL+SVAAPAL+LAMF TETVTNTLVFTNINGC+LL E+LF Sbjct 119 LINTVAILIAWYLLLRLFGYTLSSVAAPALLLAMFCTETVTNTLVFTNINGCVLLAEMLF 178 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGR RQW G+AIGLTL LKP+LGPLLLLPLLNRQWRALV A +P+++N AA Sbjct 179 LRWLLDGRVGRQWWAGVAIGLTLTLKPVLGPLLLLPLLNRQWRALVPAFAIPILINAAAW 238 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPM F TRTLPYI G RDYFNSSI GNGVYFGLPTWLI+F+RILFT I GALWLL Sbjct 239 PLVSDPMDFVTRTLPYIGGVRDYFNSSIEGNGVYFGLPTWLIVFMRILFTLIAIGALWLL 298 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYRT DP FWFT S+GVLLLWSWLV+ LAQGYYSMMLFPFLMTVVLPNS+IRNWPAWL Sbjct 299 YRYYRTRDPRFWFTNSAGVLLLWSWLVLPLAQGYYSMMLFPFLMTVVLPNSLIRNWPAWL 358 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 G+YGFMTLDRWLLFNWMR+GRALEYLKITYGWSLLLIV F+VL +RYLDAKA++RLD GI Sbjct 359 GIYGFMTLDRWLLFNWMRYGRALEYLKITYGWSLLLIVVFSVLCYRYLDAKAEDRLDRGI 418 Query 421 DPAWLTPERE 430 DPAWLT RE Sbjct 419 DPAWLTAGRE 428 >gi|289444215|ref|ZP_06433959.1| integral membrane protein [Mycobacterium tuberculosis T46] gi|289417134|gb|EFD14374.1| integral membrane protein [Mycobacterium tuberculosis T46] Length=335 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/335 (99%), Positives = 335/335 (100%), Gaps = 0/335 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG Sbjct 1 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL Sbjct 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL Sbjct 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYY 335 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYY Sbjct 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYY 335 >gi|108799184|ref|YP_639381.1| hypothetical protein Mmcs_2217 [Mycobacterium sp. MCS] gi|119868299|ref|YP_938251.1| hypothetical protein Mkms_2263 [Mycobacterium sp. KMS] gi|108769603|gb|ABG08325.1| putative conserved integral membrane protein [Mycobacterium sp. MCS] gi|119694388|gb|ABL91461.1| putative conserved integral membrane protein [Mycobacterium sp. KMS] Length=438 Score = 590 bits (1520), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 309/432 (72%), Positives = 354/432 (82%), Gaps = 4/432 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YG+LV AADS+RTGL + FRPRT P AT+LRS LWP A+++V+HR+ VL TNG Sbjct 1 MYGSLVAAADSLRTGLSNA----FRPRTSPPGVATVLRSVLWPLAIMTVIHRTYVLATNG 56 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 ITDDF PVYRAV N R G DIYNEHFD+VDPHYLYPPGGTLL+APFG+LP SR + Sbjct 57 YITDDFGPVYRAVSNLRLGLDIYNEHFDHVDPHYLYPPGGTLLLAPFGFLPEFASRNWYF 116 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 ++N+ A L AAY LLRMFN+TL SVAAPAL+LAM+ TE+VTNT+VFTNING +LL EVLF Sbjct 117 TLNSLATLAAAYFLLRMFNYTLASVAAPALVLAMYCTESVTNTIVFTNINGFMLLAEVLF 176 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 RWLLDGR SR+W G+AIGL LV+KP L PLLLLPLLNRQWR+LV AV VPVV N+AA Sbjct 177 FRWLLDGRGSREWLAGVAIGLALVVKPSLAPLLLLPLLNRQWRSLVTAVAVPVVFNLAAW 236 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLVSDPMSF TRTLPYI+GTRDYFNSSI GNG+Y+GLP LIL LRILF A+T G+L LL Sbjct 237 PLVSDPMSFVTRTLPYIMGTRDYFNSSIEGNGIYYGLPPLLILALRILFLALTIGSLVLL 296 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YR+YRT DP FW TSSGVLL S+L++SL Q YYSMMLFPFLMTVVLPNSV+RNWPAWL Sbjct 297 YRFYRTRDPRFWMLTSSGVLLTASFLILSLGQAYYSMMLFPFLMTVVLPNSVLRNWPAWL 356 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 VYGFMT+DRWL++ W GR LEY+K+TYGWSL+L+V F VLYFRYLDAKAD RLD GI Sbjct 357 AVYGFMTMDRWLMWRWPTTGRFLEYMKVTYGWSLMLVVVFAVLYFRYLDAKADGRLDRGI 416 Query 421 DPAWLTPEREGQ 432 DP WLT E Sbjct 417 DPLWLTDPAEDS 428 >gi|126434792|ref|YP_001070483.1| hypothetical protein Mjls_2206 [Mycobacterium sp. JLS] gi|126234592|gb|ABN97992.1| putative conserved integral membrane protein [Mycobacterium sp. JLS] Length=433 Score = 581 bits (1498), Expect = 7e-164, Method: Compositional matrix adjust. Identities = 305/427 (72%), Positives = 349/427 (82%), Gaps = 4/427 (0%) Query 6 VTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD 65 + AADS+RTGL + FRPRT P AT+LRS LWP A+++V+HR+ VL TNG ITDD Sbjct 1 MAAADSLRTGLSNA----FRPRTSPPGVATVLRSVLWPLAIMTVIHRTYVLATNGYITDD 56 Query 66 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA 125 F PVYRAV N R G DIYNEHFD+VDPHYLYPPGGTLL+APFG+LP SR + ++N+ Sbjct 57 FGPVYRAVSNLRLGLDIYNEHFDHVDPHYLYPPGGTLLLAPFGFLPEFASRNWYFTLNSL 116 Query 126 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL 185 A L AAY LLRMFN+TL SVAAPAL+LAM+ TE+VTNT+VFTNING +LL EVLF RWLL Sbjct 117 ATLAAAYFLLRMFNYTLASVAAPALVLAMYCTESVTNTIVFTNINGFMLLAEVLFFRWLL 176 Query 186 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSD 245 DGR SR+W G+AIGL LV+KP L PLLLLPLLNRQWR+LV AV VPVV N+AA PLVSD Sbjct 177 DGRGSREWLAGVAIGLALVVKPSLAPLLLLPLLNRQWRSLVTAVAVPVVFNLAAWPLVSD 236 Query 246 PMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYR 305 PMSF TRTLPYI+GTRDYFNSSI GNG+Y+GLP LIL LRILF A+T G+L LLYR+YR Sbjct 237 PMSFVTRTLPYIMGTRDYFNSSIEGNGIYYGLPPLLILALRILFLALTIGSLVLLYRFYR 296 Query 306 TGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGF 365 T DP FW TSSGVLL S+L++SL Q YYSMMLFPFLMTVVLPNSV+RNWPAWL VYGF Sbjct 297 TRDPRFWMLTSSGVLLTASFLILSLGQAYYSMMLFPFLMTVVLPNSVLRNWPAWLAVYGF 356 Query 366 MTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 MT+DRWL++ W GR LEY+K+TYGWSL+L+V F VLYFRYLDAKAD RLD GIDP WL Sbjct 357 MTMDRWLMWRWPTTGRFLEYMKVTYGWSLMLVVVFAVLYFRYLDAKADGRLDRGIDPLWL 416 Query 426 TPEREGQ 432 T E Sbjct 417 TDPAEDS 423 >gi|333991059|ref|YP_004523673.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333487027|gb|AEF36419.1| transmembrane protein [Mycobacterium sp. JDM601] Length=397 Score = 561 bits (1447), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 294/390 (76%), Positives = 329/390 (85%), Gaps = 0/390 (0%) Query 41 LWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGG 100 LWP A++S++HR+IVL NGNITDDFKPVYRAVLNFR G DIYNEHFDYVDPHYLY PGG Sbjct 2 LWPVAIMSLIHRAIVLPLNGNITDDFKPVYRAVLNFRHGLDIYNEHFDYVDPHYLYSPGG 61 Query 101 TLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETV 160 TLLM+PFGYLP SRY FI+ NT AIL+AAYLLLRMF F LTSVAAPAL+ AMF TE+V Sbjct 62 TLLMSPFGYLPETLSRYTFITTNTVAILIAAYLLLRMFGFGLTSVAAPALLAAMFLTESV 121 Query 161 TNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNR 220 ++TLVFTNING ILL EVLFLRWLLDGR SRQW G+AIGLTLV+KP+L PLLLLPLL+R Sbjct 122 SSTLVFTNINGVILLAEVLFLRWLLDGRPSRQWWAGVAIGLTLVVKPVLAPLLLLPLLSR 181 Query 221 QWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTW 280 QWR V AV VPV N A PL SDP S+FT+T+PYI+GTRDYFNSSILGNGV+FGLP Sbjct 182 QWRPFVGAVAVPVAFNAVAFPLSSDPTSYFTQTVPYIMGTRDYFNSSILGNGVFFGLPPG 241 Query 281 LILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLF 340 LILFLR+LFT I +LWLLYRYYRT DP FW TSSGVLL S+LV+SL QGYYS++LF Sbjct 242 LILFLRVLFTVIAAVSLWLLYRYYRTRDPRFWMLTSSGVLLTASFLVLSLGQGYYSIVLF 301 Query 341 PFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTF 400 PFLMTVVLPNSV+RNWPAWLGVYGFMTLD+WL+F WM GR L+YLKITYGWSLLLIV Sbjct 302 PFLMTVVLPNSVLRNWPAWLGVYGFMTLDKWLIFRWMNVGRPLDYLKITYGWSLLLIVVC 361 Query 401 TVLYFRYLDAKADNRLDGGIDPAWLTPERE 430 VL +RYLDA+ +RLD GIDPAWL + Sbjct 362 AVLCYRYLDAREQDRLDDGIDPAWLANGHQ 391 >gi|118469940|ref|YP_887116.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118171227|gb|ABK72123.1| putative conserved integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length=430 Score = 556 bits (1433), Expect = 2e-156, Method: Compositional matrix adjust. Identities = 299/429 (70%), Positives = 346/429 (81%), Gaps = 4/429 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +Y ALVTA DSI T LL FRPRT APSTAT+LRS LWP A+LSV+HRS VL TNG Sbjct 1 MYCALVTATDSITT----KLLNAFRPRTSAPSTATVLRSVLWPIAILSVIHRSYVLGTNG 56 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 ITDDF PVYRAV+NF+ G DIYNE FD+VDPHYLYPPGGTLL+APFGYLP SRY +I Sbjct 57 YITDDFGPVYRAVINFKLGLDIYNEQFDHVDPHYLYPPGGTLLLAPFGYLPVDASRYWYI 116 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 S N A L+AAYL+LR+F++TL+SVAAPAL+LAMF TE+VTNTLVFTNINGC+LL VLF Sbjct 117 SFNVLAFLIAAYLMLRIFDYTLSSVAAPALVLAMFCTESVTNTLVFTNINGCMLLGAVLF 176 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 RWLL G + + G AIGLTLV+KP L PLLLLP+LNRQ+ L+ A VP+V N+AA Sbjct 177 FRWLLKGGRNAELLAGAAIGLTLVVKPSLAPLLLLPVLNRQFYTLITAFGVPLVFNIAAW 236 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 PLV DPM+F T+PYI+ TRDYFNSSI+GNG+Y+GLP WLIL LR++F + G+LWLL Sbjct 237 PLVPDPMNFVRHTVPYIMSTRDYFNSSIVGNGIYYGLPMWLILLLRVVFLLLAVGSLWLL 296 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 YRYYR DP FW TSSGVLL S+L++SL QGYYS MLFPFLMTVVLPNSV+RNWPAWL Sbjct 297 YRYYRERDPRFWLLTSSGVLLTASFLLLSLGQGYYSTMLFPFLMTVVLPNSVLRNWPAWL 356 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 +YGFMT+DRWLL +W GR LEY+KITYGWSL+L+V F VLYFRYLDAK D RLD GI Sbjct 357 AIYGFMTMDRWLLGHWPTTGRFLEYMKITYGWSLMLVVVFCVLYFRYLDAKQDGRLDQGI 416 Query 421 DPAWLTPER 429 DP W+ ER Sbjct 417 DPPWMARER 425 >gi|120403477|ref|YP_953306.1| putative integral membrane protein [Mycobacterium vanbaalenii PYR-1] gi|119956295|gb|ABM13300.1| putative conserved integral membrane protein [Mycobacterium vanbaalenii PYR-1] Length=421 Score = 553 bits (1426), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 292/417 (71%), Positives = 336/417 (81%), Gaps = 3/417 (0%) Query 20 LLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG 79 +L FRPRT P+TA++LRS LWP A+++V+HRS VL N ITDDF PVYRAV+NF+ G Sbjct 5 VLTAFRPRTSPPTTASVLRSILWPLAIMAVIHRSYVLVFNRYITDDFAPVYRAVINFKFG 64 Query 80 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN 139 WDIYNE+F +VDPHYLYPPGGTL++APFGYLP SR FI NT AI++A Y LLR+FN Sbjct 65 WDIYNENFGHVDPHYLYPPGGTLIIAPFGYLPEVASRNWFIFFNTVAIVLAGYFLLRLFN 124 Query 140 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI 199 FTL SVAAPAL+LAMF TE+VTNTLVF NING ILLLEVLF RWLLDG S +W G++I Sbjct 125 FTLASVAAPALLLAMFCTESVTNTLVFGNINGVILLLEVLFFRWLLDGNRSHEWWAGVSI 184 Query 200 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG 259 GLTLV+KPLL PLLLLPLLNRQWRALV A VPV N+AA PL+SDPM+F TRT+PYI Sbjct 185 GLTLVVKPLLAPLLLLPLLNRQWRALVTAFAVPVAFNLAAWPLISDPMNFVTRTVPYIFS 244 Query 260 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV 319 TRDYFNSSILGNG+Y+GLP WLI+ LRI F + ALWLLYRYYRT DP FW TSSGV Sbjct 245 TRDYFNSSILGNGLYYGLPMWLIMSLRIAFVVLGAAALWLLYRYYRTRDPFFWMLTSSGV 304 Query 320 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW 379 +L+ SWLV+SL QGYYS++LFPFLMTVVLPNSVIRNW AWL YGF+T+DRWLL+ Sbjct 305 VLVTSWLVLSLGQGYYSIVLFPFLMTVVLPNSVIRNWVAWLAAYGFLTMDRWLLWQLPTT 364 Query 380 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAW---LTPEREGQR 433 GRALEYLKIT+GWSL+ +V F+VL FRYLDAK D RLD GIDP W LTP + Sbjct 365 GRALEYLKITFGWSLMSVVVFSVLLFRYLDAKDDGRLDEGIDPPWMKQLTPADKAAE 421 >gi|145224496|ref|YP_001135174.1| hypothetical protein Mflv_3915 [Mycobacterium gilvum PYR-GCK] gi|145216982|gb|ABP46386.1| putative conserved integral membrane protein [Mycobacterium gilvum PYR-GCK] Length=417 Score = 543 bits (1399), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 288/406 (71%), Positives = 335/406 (83%), Gaps = 0/406 (0%) Query 20 LLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG 79 +L FRPRT P+TAT+LRS LWP A+++V+HRS VL N ITDDF PVYRAV+NF+ G Sbjct 1 MLTAFRPRTAPPTTATVLRSILWPLAIMAVIHRSYVLVFNRYITDDFAPVYRAVINFKFG 60 Query 80 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN 139 WDIYNEHFD+VDPHYLYPPGGTL++APFGYLP SR FI NT AI++A Y LLR+FN Sbjct 61 WDIYNEHFDHVDPHYLYPPGGTLIIAPFGYLPEVASRNWFIFFNTVAIILAGYFLLRLFN 120 Query 140 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI 199 +TL+SVAAPAL+LAMF TE+VTNTLVF NING +LLLEVLF RWLLDG + +W G++I Sbjct 121 YTLSSVAAPALLLAMFCTESVTNTLVFGNINGVLLLLEVLFFRWLLDGNRNHEWLAGISI 180 Query 200 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG 259 GLTLV+KPLL PLLLLPLLNRQWRALVAA VVP+V N AA PL+SDPM+F TRT+PYIL Sbjct 181 GLTLVVKPLLAPLLLLPLLNRQWRALVAAFVVPLVFNAAAWPLISDPMNFVTRTVPYILS 240 Query 260 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV 319 TRDYFNSSILGNG+Y+GLP WLI+ LR+ + +LWLLYR+YRT DP FW TSSGV Sbjct 241 TRDYFNSSILGNGLYYGLPMWLIMTLRVTIIVLGAISLWLLYRHYRTRDPFFWMLTSSGV 300 Query 320 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW 379 LL SWL +SL QGYYS+ LFPFLMTVVLPNSVIR+W AWL YGF+T+DRWLL+ Sbjct 301 LLTTSWLALSLGQGYYSIALFPFLMTVVLPNSVIRSWVAWLAAYGFLTMDRWLLWQLPST 360 Query 380 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 GRA EYLKITYGWSL+++V F VL FRYLDA+ DNRLD GIDPAW+ Sbjct 361 GRAFEYLKITYGWSLMMVVVFAVLLFRYLDARQDNRLDEGIDPAWM 406 >gi|315444827|ref|YP_004077706.1| hypothetical protein Mspyr1_32600 [Mycobacterium sp. Spyr1] gi|315263130|gb|ADT99871.1| Protein of unknown function (DUF2029) [Mycobacterium sp. Spyr1] Length=421 Score = 540 bits (1390), Expect = 3e-151, Method: Compositional matrix adjust. Identities = 286/406 (71%), Positives = 333/406 (83%), Gaps = 0/406 (0%) Query 20 LLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRG 79 +L FRPRT P+TAT+LRS LWP A+++V+HRS VL N ITDDF PVYRAV+NF+ G Sbjct 5 VLTAFRPRTAPPTTATVLRSILWPLAIMAVIHRSYVLVFNRYITDDFAPVYRAVINFKFG 64 Query 80 WDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFN 139 WDIYNEHFD+VDPHYLYPPGGTL++APFGYLP SR FI NT AI++A Y LLR+FN Sbjct 65 WDIYNEHFDHVDPHYLYPPGGTLIIAPFGYLPEVASRNWFIFFNTVAIILAGYFLLRLFN 124 Query 140 FTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAI 199 +TL+SVAAPAL+LAMF TE+VTNTLVF NING +LLLEVLF RWLLDG + +W G++I Sbjct 125 YTLSSVAAPALLLAMFCTESVTNTLVFGNINGVLLLLEVLFFRWLLDGNRNHEWLAGISI 184 Query 200 GLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILG 259 GLTLV+KPLL PLLLLPLLNRQWRALVAA VVP+V N AA PL+SDPM+F TRT+PYIL Sbjct 185 GLTLVVKPLLAPLLLLPLLNRQWRALVAAFVVPLVFNAAAWPLISDPMNFVTRTVPYILS 244 Query 260 TRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGV 319 TRDYFNSSILGNG+Y+GLP WLI+ LR+ + +LWLLY +YRT DP FW TSSGV Sbjct 245 TRDYFNSSILGNGLYYGLPMWLIMTLRVTIIVLGVISLWLLYSHYRTRDPFFWMLTSSGV 304 Query 320 LLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW 379 LL SWL +SL QGYYS+ LFPFLMTVVLPNSVIR+W AWL YGF+T+DRWLL+ Sbjct 305 LLTTSWLALSLGQGYYSIALFPFLMTVVLPNSVIRSWVAWLAAYGFLTMDRWLLWQLPST 364 Query 380 GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 GRA EYLKITYGWSL+++V F VL FRYLDA+ DNRLD GIDP W+ Sbjct 365 GRAFEYLKITYGWSLMMVVVFAVLLFRYLDARQDNRLDEGIDPVWM 410 >gi|298526143|ref|ZP_07013552.1| transmembrane protein [Mycobacterium tuberculosis 94_M4241A] gi|298495937|gb|EFI31231.1| transmembrane protein [Mycobacterium tuberculosis 94_M4241A] Length=307 Score = 532 bits (1370), Expect = 5e-149, Method: Compositional matrix adjust. Identities = 271/272 (99%), Positives = 272/272 (100%), Gaps = 0/272 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG Sbjct 1 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL Sbjct 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNG 272 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNG Sbjct 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNG 272 >gi|289570847|ref|ZP_06451074.1| predicted protein [Mycobacterium tuberculosis T17] gi|289544601|gb|EFD48249.1| predicted protein [Mycobacterium tuberculosis T17] Length=270 Score = 498 bits (1282), Expect = 7e-139, Method: Compositional matrix adjust. Identities = 255/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%) Query 1 VYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 +YGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG Sbjct 1 MYGALVTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNG 60 Query 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI Sbjct 61 NITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFI 120 Query 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF Sbjct 121 SINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLF 180 Query 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL Sbjct 181 LRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL 240 Query 241 PLVSDPMSFFTRTLPYIL 258 PLVSDPMSFFTRTLP +L Sbjct 241 PLVSDPMSFFTRTLPVVL 258 >gi|169630061|ref|YP_001703710.1| hypothetical protein MAB_2978 [Mycobacterium abscessus ATCC 19977] gi|169242028|emb|CAM63056.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=454 Score = 496 bits (1276), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 268/428 (63%), Positives = 319/428 (75%), Gaps = 9/428 (2%) Query 6 VTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD 65 + + D++ TG SL P+T PS ATILRS LWP A+++V+HRS VL TNG ITDD Sbjct 1 MVSVDALVTGFKNSL----APKTAPPSVATILRSVLWPVAIMAVIHRSYVLGTNGYITDD 56 Query 66 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA 125 F PVYRAV+ F+ +Y E+F+YVDPHY+YPPGGTLL+APFGYLP SRY FI+INT Sbjct 57 FGPVYRAVIAFKLHQPVYGENFNYVDPHYIYPPGGTLLLAPFGYLPVDASRYWFITINTI 116 Query 126 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL 185 AI++AAY LLR+FNFTL SVAAPAL+LAMF TE+VTNTLVFTNING +LLLEVLF RWLL Sbjct 117 AIVIAAYFLLRLFNFTLASVAAPALLLAMFCTESVTNTLVFTNINGVVLLLEVLFFRWLL 176 Query 186 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAAL----- 240 G +W G+AIGLTLV+KPLL PLLLLPLLNRQWR AA +P N+ AL Sbjct 177 HGTKKSEWLAGVAIGLTLVIKPLLAPLLLLPLLNRQWRVFAAAFGIPAFFNLVALYGPRK 236 Query 241 PLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLL 300 + D + RT+ Y+ TRDYFNSSI GNG+Y+GLP LI FLRI F AI ++WLL Sbjct 237 VRIVDGWDYLRRTVKYLGETRDYFNSSIAGNGLYYGLPEPLIAFLRIAFLAIALVSVWLL 296 Query 301 YRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWL 360 Y+YYR DP FW T+ GVLL S+L++ L QGYYSM LFPF+MT+VLPNSV+RNWPAWL Sbjct 297 YKYYRRRDPRFWALTTGGVLLTASFLLLGLGQGYYSMALFPFVMTIVLPNSVLRNWPAWL 356 Query 361 GVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGI 420 VYGF ++DRWLL +W GRALEYLKITYGW LLLIV VL RY DA+A LD G+ Sbjct 357 AVYGFFSMDRWLLGHWPTTGRALEYLKITYGWCLLLIVVMMVLVLRYRDARAAGTLDQGL 416 Query 421 DPAWLTPE 428 DP W+ + Sbjct 417 DPEWMRAQ 424 >gi|333919453|ref|YP_004493034.1| integral membrane protein [Amycolicicoccus subflavus DQS3-9A1] gi|333481674|gb|AEF40234.1| Integral membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=421 Score = 415 bits (1066), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 209/399 (53%), Positives = 282/399 (71%), Gaps = 4/399 (1%) Query 32 STATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVD 91 STA I+ +WP AV++V+HR+++L NG +T+DF P+Y A +NF D+Y +F++ D Sbjct 13 STADIISMVMWPLAVMTVIHRTVILAFNGAVTNDFLPIYTAAVNFINYTDVYLGNFNWTD 72 Query 92 PHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALI 151 PHYLYPP GTL++AP GYL + +R L+I IN ILVAAY LL+MF + L SVA P I Sbjct 73 PHYLYPPSGTLMIAPLGYLDYDLARRLYIVINAIGILVAAYYLLKMFGYGLKSVAMPITI 132 Query 152 LAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGP 211 AMF+TETV+NTL++TNING I L ++LFL++LL+ R W G+ +GLT+ +KP+L P Sbjct 133 FAMFSTETVSNTLIYTNINGLIFLAQILFLKFLLE---RRLWWAGVPMGLTIAIKPILAP 189 Query 212 LLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGN 271 LL+ P + +QW+ VA++ +P+V+ A PL DP F T+PY+ +RDYFNS+I GN Sbjct 190 LLIFPFIKKQWQPFVASLGIPLVLTAIAWPLSKDPGRFVRETVPYLAESRDYFNSAISGN 249 Query 272 GVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLA 331 VY+GLP W++L LR LF IT +LWLLYRYYR D LF+ T+SGV+L +L+ SL Sbjct 250 AVYYGLPDWMVLGLRGLFAVITLTSLWLLYRYYR-DDELFFLCTASGVILTAQFLLGSLG 308 Query 332 QGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYG 391 Q YYSM++FP LMTVV+ SV+RNWPAWL YGF+T D W W + G AL++L+ T G Sbjct 309 QMYYSMLIFPLLMTVVMKRSVMRNWPAWLAAYGFLTFDMWYSVPWRQTGEALQFLRTTLG 368 Query 392 WSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPERE 430 WSLLLIV TVL RYLDA+ LD G+DP ++ + E Sbjct 369 WSLLLIVVCTVLVNRYLDARKAGTLDQGLDPPYIRDDVE 407 >gi|54025704|ref|YP_119946.1| hypothetical protein nfa37340 [Nocardia farcinica IFM 10152] gi|54017212|dbj|BAD58582.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=448 Score = 414 bits (1064), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 231/415 (56%), Positives = 291/415 (71%), Gaps = 7/415 (1%) Query 21 LAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGW 80 L PRT A +TA +++ ALWP AV++VL+R + NG ITDD+KPVY A L F G Sbjct 8 LRQLEPRT-ARTTAEVIKFALWPIAVMTVLNRVFIKAVNGFITDDYKPVYNASLAFLNGR 66 Query 81 DIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNF 140 +Y +FDYVDPHYLYPPGGTLL+AP + SR+ FI +N AAI++A YLLLR+F F Sbjct 67 PVYTANFDYVDPHYLYPPGGTLLIAPIALIDPEKSRWCFILLNAAAIILAWYLLLRLFKF 126 Query 141 TLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIG 200 T+ SVAAPAL+LAMF +ETV NTLVFTN+NGCILL E+ FL L R W G + +G Sbjct 127 TVNSVAAPALLLAMFMSETVINTLVFTNVNGCILLAEMGFL--HLLLRRRDLWAGAI-LG 183 Query 201 LTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGT 260 L++ +KP L PLLL+ +QW + + VP+V+ + PL+ D FF+RTLPY+ T Sbjct 184 LSITVKPTLAPLLLIAAARKQWNVFLTGLGVPLVLTAISWPLLKDADQFFSRTLPYLFET 243 Query 261 RDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVL 320 RDYFNSSI GN Y+GLP WL +R++ A+ +LWLLYRYYR D LF+ TTS+GVL Sbjct 244 RDYFNSSIAGNAAYYGLPLWLTWGMRLVMGALVAISLWLLYRYYRE-DELFFVTTSAGVL 302 Query 321 LLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWG 380 L SWL+ L Q YYSMMLFPFLM+VVL NSV+RNWPAWL V+GFM+ D+WL W G Sbjct 303 LTASWLLAGLGQMYYSMMLFPFLMSVVLRNSVLRNWPAWLAVFGFMSYDKWLSDRWQSIG 362 Query 381 RALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL--TPEREGQR 433 R LEYL+IT+GW+LLLIV F VL RYL A+ + RL G+DPAW+ P+ G Sbjct 363 RNLEYLRITFGWTLLLIVVFCVLGDRYLAARREGRLALGLDPAWMRQAPDSRGSE 417 >gi|226306342|ref|YP_002766302.1| arabinosyltransferase AftC [Rhodococcus erythropolis PR4] gi|226185459|dbj|BAH33563.1| arabinosyltransferase AftC [Rhodococcus erythropolis PR4] Length=427 Score = 406 bits (1043), Expect = 4e-111, Method: Compositional matrix adjust. Identities = 240/405 (60%), Positives = 290/405 (72%), Gaps = 5/405 (1%) Query 21 LAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGW 80 L PRTG +T ++ LWP AV++VL+R IV NG ITDDF+PVY A L F G Sbjct 8 LRQLEPRTGR-TTQQVVNFVLWPIAVMTVLNRVIVTAVNGAITDDFRPVYNAALAFWNGR 66 Query 81 DIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNF 140 D+Y F+ VDPHYLYPP G+LLMAP L SR+LFI +N AILVA YLLLR+F+ Sbjct 67 DVYTADFNSVDPHYLYPPSGSLLMAPLAILDPERSRWLFIGVNAVAILVALYLLLRLFDL 126 Query 141 TLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIG 200 T++S+AAP L+L F +ETVTNTLVFTNING +LL EV FL LL R W G AIG Sbjct 127 TISSIAAPILVLGAFMSETVTNTLVFTNINGLVLLGEVAFL--LLLMRKKDLWAGA-AIG 183 Query 201 LTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGT 260 LT+ +KP L PLLLLPL+ QW+ LV A+ +P ++ V A PL SDPM F RT+PY+L + Sbjct 184 LTIAVKPTLAPLLLLPLVRGQWKVLVTALGIPFILTVVAWPLASDPMDFVRRTVPYLLES 243 Query 261 RDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVL 320 RDYFNSSI+GNG YFGLP WLIL LR++ A+ +LWLLYRYYR D LF+ TT++GV+ Sbjct 244 RDYFNSSIVGNGAYFGLPEWLILLLRVVLAAMVVVSLWLLYRYYR-NDELFFLTTATGVI 302 Query 321 LLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWG 380 + S+L+ SL Q YYSMML P LM+VVL NSV+RNWPAWL VYGFMT D W W +G Sbjct 303 MTASFLLPSLGQMYYSMMLLPLLMSVVLKNSVMRNWPAWLAVYGFMTFDSWWSNRWPTFG 362 Query 381 RALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 RA EY K T GWSLLLIV F VL +RYL A+ + RLD GIDPA+L Sbjct 363 RAAEYTKSTLGWSLLLIVIFCVLGYRYLVARREGRLDRGIDPAYL 407 >gi|229491269|ref|ZP_04385095.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321808|gb|EEN87603.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=422 Score = 404 bits (1038), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 239/405 (60%), Positives = 289/405 (72%), Gaps = 5/405 (1%) Query 21 LAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGW 80 L PRTG +T ++ LWP AV++VL+R IV NG ITDDF+PVY A L F G Sbjct 3 LRQLEPRTGR-TTQQVVNFVLWPIAVMTVLNRVIVTAVNGAITDDFRPVYNAALAFWNGR 61 Query 81 DIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNF 140 D+Y F+ VDPHYLYPP G+LLMAP L SR+LFI +N AILVA YLLLR+F+ Sbjct 62 DVYTADFNSVDPHYLYPPSGSLLMAPLAILDPERSRWLFIGVNAVAILVALYLLLRLFDL 121 Query 141 TLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIG 200 T++S+AAP L+L F +ETVTNTLVFTNING +LL EV FL LL R W G AIG Sbjct 122 TISSIAAPILVLGAFMSETVTNTLVFTNINGLVLLGEVAFL--LLLMRKKDLWAGA-AIG 178 Query 201 LTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGT 260 LT+ +KP L PLLLLPL+ QW+ V A+ +P ++ V A PL SDPM F RT+PY+L + Sbjct 179 LTIAVKPTLAPLLLLPLVRGQWKVFVTALGIPFILTVVAWPLASDPMDFVRRTVPYLLES 238 Query 261 RDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVL 320 RDYFNSSI+GNG YFGLP WLIL LR++ A+ +LWLLYRYYR D LF+ TT++GV+ Sbjct 239 RDYFNSSIVGNGAYFGLPEWLILLLRVVLAAMVVVSLWLLYRYYR-NDELFFLTTATGVI 297 Query 321 LLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWG 380 + S+L+ SL Q YYSMML P LM+VVL NSV+RNWPAWL VYGFMT D W W +G Sbjct 298 MTASFLLPSLGQMYYSMMLLPLLMSVVLKNSVMRNWPAWLAVYGFMTFDSWWSNRWPTFG 357 Query 381 RALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 RA EY K T GWSLLLIV F VL +RYL A+ + RLD GIDPA+L Sbjct 358 RAAEYTKSTLGWSLLLIVIFCVLGYRYLVARREGRLDRGIDPAYL 402 >gi|312139473|ref|YP_004006809.1| integral membrane protein [Rhodococcus equi 103S] gi|311888812|emb|CBH48124.1| putative integral membrane protein [Rhodococcus equi 103S] Length=422 Score = 400 bits (1028), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 225/409 (56%), Positives = 290/409 (71%), Gaps = 6/409 (1%) Query 24 FRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIY 83 F PRTG +TA ++ +WP AV++V+HR +V NG+ITDD+ PVY A L F D+Y Sbjct 11 FEPRTGR-TTAEVINFVMWPLAVMTVIHRIVVKAVNGSITDDYAPVYNAALAFLNRQDVY 69 Query 84 NEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLT 143 +F+ VDPHYLYPP GT+L+AP L SR+LFI N A+++A ++LL+MF+ Sbjct 70 TANFNSVDPHYLYPPSGTMLLAPIAILDPEKSRWLFILANAIAVIIALFVLLKMFDLAWN 129 Query 144 SVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTL 203 S+AAP LI A F+TETV+NTL+F+NING ILL EV FL L R W G AIGLT Sbjct 130 SIAAPILIFAAFSTETVSNTLIFSNINGLILLAEVAFL--ALLLRRRDLWAGT-AIGLTF 186 Query 204 VLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDY 263 +KP+L PLLLLPL+ QW+ V AV +P+V+ A PL +DPM+F T PY++ +RDY Sbjct 187 AIKPILAPLLLLPLVRGQWKVFVTAVGIPLVLMAVAWPLAADPMAFIDHTFPYLMESRDY 246 Query 264 FNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLW 323 FNS+I+GNG YFGLP +I LRI F A+ +LWLLYRYYR D LF+ TT++G+L++ Sbjct 247 FNSAIVGNGTYFGLPVAMIWALRIAFAAMGAVSLWLLYRYYR-HDELFFVTTTAGLLMVG 305 Query 324 SWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRAL 383 S+L++SL Q YYSM+LFP LMTVVL NSV+RNWPAWL YGF++ D W ++ GRA+ Sbjct 306 SFLLLSLGQMYYSMLLFPLLMTVVLRNSVMRNWPAWLAAYGFLSADTWFSSRFVEEGRAV 365 Query 384 EYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQ 432 EYLK TYGWSLLLIV F VL RYL AK + RLD GIDP +L E +G+ Sbjct 366 EYLKPTYGWSLLLIVIFCVLVNRYLTAKREGRLDKGIDPDFLV-ETDGR 413 >gi|325672637|ref|ZP_08152333.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325556514|gb|EGD26180.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length=417 Score = 400 bits (1028), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 225/409 (56%), Positives = 290/409 (71%), Gaps = 6/409 (1%) Query 24 FRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIY 83 F PRTG +TA ++ +WP AV++V+HR +V NG+ITDD+ PVY A L F D+Y Sbjct 6 FEPRTGR-TTAEVINFVMWPLAVMTVIHRIVVKAVNGSITDDYAPVYNAALAFLNRQDVY 64 Query 84 NEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLT 143 +F+ VDPHYLYPP GT+L+AP L SR+LFI N A+++A ++LL+MF+ Sbjct 65 TANFNSVDPHYLYPPSGTMLLAPIAILDPEKSRWLFILANAIAVIIALFVLLKMFDLAWN 124 Query 144 SVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTL 203 S+AAP LI A F+TETV+NTL+F+NING ILL EV FL L R W G AIGLT Sbjct 125 SIAAPILIFAAFSTETVSNTLIFSNINGLILLAEVAFL--ALLLRRRDLWAGT-AIGLTF 181 Query 204 VLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDY 263 +KP+L PLLLLPL+ QW+ V AV +P+V+ A PL +DPM+F T PY++ +RDY Sbjct 182 AIKPILAPLLLLPLVRGQWKVFVTAVGIPLVLMAVAWPLAADPMAFIDHTFPYLMESRDY 241 Query 264 FNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLW 323 FNS+I+GNG YFGLP +I LRI F A+ +LWLLYRYYR D LF+ TT++G+L++ Sbjct 242 FNSAIVGNGTYFGLPVAMIWALRIAFAAMGAVSLWLLYRYYR-HDELFFVTTTAGLLMVG 300 Query 324 SWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRAL 383 S+L++SL Q YYSM+LFP LMTVVL NSV+RNWPAWL YGF++ D W ++ GRA+ Sbjct 301 SFLLLSLGQMYYSMLLFPLLMTVVLRNSVMRNWPAWLAAYGFLSADTWFSSRFVEEGRAV 360 Query 384 EYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQ 432 EYLK TYGWSLLLIV F VL RYL AK + RLD GIDP +L E +G+ Sbjct 361 EYLKPTYGWSLLLIVIFCVLVNRYLTAKREGRLDKGIDPDFLV-ETDGR 408 >gi|111023821|ref|YP_706793.1| hypothetical protein RHA1_ro06863 [Rhodococcus jostii RHA1] gi|110823351|gb|ABG98635.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=445 Score = 388 bits (997), Expect = 9e-106, Method: Compositional matrix adjust. Identities = 236/436 (55%), Positives = 297/436 (69%), Gaps = 14/436 (3%) Query 6 VTAADSIRTGLGASLLAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDD 65 +TA S L PRTG + ++ ALWP AV++VLHR +V NG ITDD Sbjct 1 MTARQSFSVYRAVVFLRQLEPRTGRTANE-VINFALWPIAVMTVLHRVVVKAVNGYITDD 59 Query 66 FKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTA 125 F+PVY A L F G +Y +F++VDPHYLYPP GTLLMAP + SR+LFI N Sbjct 60 FRPVYNAALAFLNGRPVYTANFNWVDPHYLYPPSGTLLMAPIAVIDPEKSRWLFIIANAI 119 Query 126 AILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLL 185 AI++A YLLLR+F L S+AAP L+LA F++ETVTNTLVFTNING +LL E+ FL L+ Sbjct 120 AIVIALYLLLRLFGLGLNSIAAPILLLATFSSETVTNTLVFTNINGLVLLGEIAFLVLLM 179 Query 186 DGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSD 245 + W G+AIGLT +KP+L PLLLLPL+ QW+ V A+ +P+++ A PL +D Sbjct 180 --KRKDMWS-GVAIGLTFAVKPILAPLLLLPLVRGQWKVFVTAIGIPLILTAVAWPLSAD 236 Query 246 PMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYR 305 PM F T+PY++ +RDYFNS+I+GNG Y+GLPT LI LR +FTAI +LWLLYRYYR Sbjct 237 PMDFVRHTVPYLMESRDYFNSAIVGNGKYYGLPTALIWALRGVFTAIVLSSLWLLYRYYR 296 Query 306 TGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGF 365 D LF+ T+SGVLL SWL+ SL Q YYSMMLFP LM+VVL NSV+RNWPAWL VYGF Sbjct 297 -HDELFFVVTTSGVLLTASWLLGSLGQMYYSMMLFPLLMSVVLKNSVMRNWPAWLAVYGF 355 Query 366 MTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL 425 M+ D WL ++ GR EY+K T GWSL+L+V F VL RY+ A+ + RLD GIDPA+L Sbjct 356 MSYDSWLSSRFIEAGRTAEYMKTTLGWSLMLLVVFGVLTVRYVTARREGRLDRGIDPAFL 415 Query 426 ---------TPEREGQ 432 TP RE + Sbjct 416 LEPDGKAHGTPAREPE 431 >gi|296139605|ref|YP_003646848.1| hypothetical protein Tpau_1896 [Tsukamurella paurometabola DSM 20162] gi|296027739|gb|ADG78509.1| Protein of unknown function DUF2029 [Tsukamurella paurometabola DSM 20162] Length=429 Score = 384 bits (986), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 202/398 (51%), Positives = 268/398 (68%), Gaps = 3/398 (0%) Query 36 ILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYL 95 +++ LWP A+L++L R IVL N TDDF VY A + F R +Y E++D VDPHYL Sbjct 8 VIKWILWPLAILTLLQRLIVLVPNRAKTDDFTTVYTAAVRFLRHEPVYVENYDTVDPHYL 67 Query 96 YPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMF 155 Y P G+LLMAPFGY +R +F++++T A+LVA Y++LRMF + L S APA++ Sbjct 68 YAPSGSLLMAPFGYFDPETARNIFVALSTIALLVALYVMLRMFGYGLNSAVAPAVLFFAV 127 Query 156 ATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLL 215 TE VTNTLV+TN N +LL EV+ + LL + G+ +GL+ +KPLL LLL Sbjct 128 MTEAVTNTLVYTNFNLFLLLAEVVAMALLLK---RKDLWAGVPLGLSFAVKPLLAVFLLL 184 Query 216 PLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYF 275 +LNRQW+AL+ A+ VPVV+ L +DP S+ RT+PY+ RDY+NSSI GN YF Sbjct 185 IILNRQWKALITAISVPVVLLGIGWALAADPESYIDRTMPYLGQARDYYNSSISGNAAYF 244 Query 276 GLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYY 335 GLP WL L L+ + +++LLYRYYRT + L W++TS+GVL+ WLV SL QGYY Sbjct 245 GLPDWLTLLLKAAVVVMALISVYLLYRYYRTSNELLWWSTSAGVLMTAMWLVGSLGQGYY 304 Query 336 SMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLL 395 SM+LFP LMTVV +SV+ NWPAWL VYGF++ D WL W+ GR+L YLK T GW+LL Sbjct 305 SMLLFPMLMTVVFRSSVMTNWPAWLAVYGFLSYDFWLSGKWLALGRSLAYLKCTLGWTLL 364 Query 396 LIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPEREGQR 433 ++VTF VL +RYLDA+A+ RLD GID + GQ Sbjct 365 IVVTFCVLLYRYLDARAEGRLDQGIDRPLPPGDEPGQH 402 >gi|226366257|ref|YP_002784040.1| arabinosyltransferase AftC [Rhodococcus opacus B4] gi|226244747|dbj|BAH55095.1| arabinosyltransferase AftC [Rhodococcus opacus B4] Length=444 Score = 382 bits (982), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 231/420 (55%), Positives = 292/420 (70%), Gaps = 13/420 (3%) Query 21 LAGFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGW 80 L PRTG + ++ ALWP AV++VLHR +V NG ITDDF+PVY A L F G Sbjct 16 LRQLEPRTGR-TANEVINFALWPIAVMTVLHRVVVKAVNGYITDDFRPVYNAALAFLNGR 74 Query 81 DIYNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNF 140 +Y +FD+VDPHYLYPP GTLLMAP + SR+LFI N AI++A YLLLR+F Sbjct 75 PVYTANFDWVDPHYLYPPSGTLLMAPIAVIDPEKSRWLFIIANAIAIVIALYLLLRLFGL 134 Query 141 TLTSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIG 200 L S+AAP L+LA F++ETVTNTLVFTNING +LL E+ FL L+ R G+AIG Sbjct 135 GLNSIAAPILLLATFSSETVTNTLVFTNINGLVLLGEIAFLVLLMK---RRDLWSGVAIG 191 Query 201 LTLVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGT 260 LT +KP+L PLLLLPL+ QW+ V A+ +P+++ A PL +DPM F T+PY++ + Sbjct 192 LTFAVKPILAPLLLLPLVRGQWKVFVTAIGIPLILTAVAWPLSADPMDFVHHTVPYLMES 251 Query 261 RDYFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVL 320 RDYFNS+I+GNG Y+GLPT +I LR +F AI +LWLL+R+YR D LF+ T+SGVL Sbjct 252 RDYFNSAIVGNGKYYGLPTGMIWALRGVFAAIVLSSLWLLHRFYR-HDELFFVVTTSGVL 310 Query 321 LLWSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWG 380 L SWL+ SL Q YYSMMLFP LM+VVL NSV+RNWPAWL VYGFM+ D WL ++ G Sbjct 311 LTASWLLGSLGQMYYSMMLFPLLMSVVLKNSVMRNWPAWLAVYGFMSYDSWLSSRFIEAG 370 Query 381 RALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWL------TPE--REGQ 432 R EY+K T GWSL+L+V F VL RY+ A+ + RLD GIDPA+L TPE RE + Sbjct 371 RTAEYMKTTLGWSLMLLVIFGVLTVRYVTARREGRLDRGIDPAFLLEPGEKTPETPREPE 430 >gi|326384413|ref|ZP_08206093.1| hypothetical protein SCNU_15814 [Gordonia neofelifaecis NRRL B-59395] gi|326196758|gb|EGD53952.1| hypothetical protein SCNU_15814 [Gordonia neofelifaecis NRRL B-59395] Length=407 Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 201/390 (52%), Positives = 259/390 (67%), Gaps = 3/390 (0%) Query 32 STATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVD 91 + I+ LWP V+ ++ RS++L NG+ TDDF PVY A NF +YNE++ VD Sbjct 2 ESQRIISLILWPITVMMIIQRSLILGVNGHRTDDFTPVYNAAFNFLNRLPVYNENYGTVD 61 Query 92 PHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALI 151 PHYLYPP GT+LMAP L +R+LFI+++ A ++V AYLL RMF F+ S PA++ Sbjct 62 PHYLYPPSGTMLMAPLAVLNPEYARWLFIAVSVAVLVVCAYLLTRMFGFSYDSWVFPAVL 121 Query 152 LAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGP 211 F+TETV +TL+FTN NG +LL + F+ ++ + G+AIGLT+ +KP+L P Sbjct 122 FFFFSTETVAHTLIFTNFNGFVLLGMIAFMMLMM---SRHDLWAGVAIGLTIAVKPVLAP 178 Query 212 LLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGN 271 LLLL L NRQW+ L+ A+ VP+V+NV A PL DPM F RT+PY+ TRDY+NSSI GN Sbjct 179 LLLLVLFNRQWKILITAIGVPLVLNVLAWPLSKDPMDFVNRTVPYLGETRDYYNSSITGN 238 Query 272 GVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLA 331 YFG+ +WL +RI F + +LW LY+YYR D L W TTSSGVLL ++LV SL Sbjct 239 AAYFGIDSWLAWLMRIAFVVMAVFSLWFLYKYYRRTDELLWLTTSSGVLLGTTFLVGSLG 298 Query 332 QGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYG 391 QGYYSM+LFP LMTV L S +RNWPAWLGVYG MT D + W +GR LEY K+ G Sbjct 299 QGYYSMLLFPLLMTVFLKGSTMRNWPAWLGVYGCMTFDVFDSKKWEPFGRYLEYNKVPLG 358 Query 392 WSLLLIVTFTVLYFRYLDAKADNRLDGGID 421 WSLL+I F VL FRYLD + L G D Sbjct 359 WSLLMISVFCVLLFRYLDLREAKALGGSPD 388 >gi|343924654|ref|ZP_08764198.1| arabinosyltransferase AftC [Gordonia alkanivorans NBRC 16433] gi|343765454|dbj|GAA11124.1| arabinosyltransferase AftC [Gordonia alkanivorans NBRC 16433] Length=422 Score = 362 bits (928), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 198/382 (52%), Positives = 259/382 (68%), Gaps = 3/382 (0%) Query 32 STATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVD 91 S I+ LWP ++L V+HRS+ L NG+ TDDFKPVY A NF +Y E++ VD Sbjct 13 SAQRIIPMILWPISLLMVVHRSVFLGVNGDRTDDFKPVYAAAYNFLNNLPVYGENYATVD 72 Query 92 PHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALI 151 PHYLYPP GTLLMAP + + +R+ FI+++ A+L++AYLL RMF + L S P ++ Sbjct 73 PHYLYPPSGTLLMAPVAIIDYERARWAFIAVSVVALLISAYLLTRMFGYALNSWVMPTVL 132 Query 152 LAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGP 211 F TETV++TL+FTN N +LL + FL + R+ W G+ +GLT+ +KP+L P Sbjct 133 FVFFFTETVSHTLIFTNFNSFVLLGMIAFLMLM---RSRHDWWAGVPMGLTIAVKPILAP 189 Query 212 LLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGN 271 L+LLPLLNRQWR V AVVVP+V+ A PL D +F +RT+PY+ RDY+NSSI GN Sbjct 190 LMLLPLLNRQWRVFVFAVVVPLVLTAVAWPLSVDADAFISRTVPYLGEARDYYNSSIAGN 249 Query 272 GVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLA 331 G YFG+ WL+L LR F + +LW LYRYYR + L W TSSGVLL ++LV SL Sbjct 250 GAYFGVSPWLVLLLRAAFVVMAAFSLWFLYRYYRKTNELLWLATSSGVLLGTAFLVGSLG 309 Query 332 QGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYG 391 QGYYSM+LFP LMTV+LP S +RNWPAWLGVYG MT D + W +G +EY K+T+G Sbjct 310 QGYYSMLLFPLLMTVLLPGSAMRNWPAWLGVYGCMTFDSFYSQRWTAFGWMVEYNKVTWG 369 Query 392 WSLLLIVTFTVLYFRYLDAKAD 413 WSLL+I F L FR+LD ++D Sbjct 370 WSLLMIAVFCSLLFRWLDMRSD 391 >gi|262202201|ref|YP_003273409.1| hypothetical protein Gbro_2268 [Gordonia bronchialis DSM 43247] gi|262085548|gb|ACY21516.1| Protein of unknown function DUF2029 [Gordonia bronchialis DSM 43247] Length=419 Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 192/381 (51%), Positives = 255/381 (67%), Gaps = 3/381 (0%) Query 32 STATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVD 91 S I+ LWP +V+ V+ R+++L NG+ TDDFKPVY A NF +Y E++ V Sbjct 13 SVQRIVPMILWPISVMMVIQRALILGVNGSRTDDFKPVYAAAFNFLNNLPVYGENYSTVS 72 Query 92 PHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALI 151 PHYLYPP GTLLMAP L + +R+LFI+++ A++ AYLL RMF ++ S P ++ Sbjct 73 PHYLYPPSGTLLMAPVAVLDYERARWLFIAVSAIALVGCAYLLTRMFGYSAGSWVFPTVL 132 Query 152 LAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGP 211 F+TETV NTL+FTN N +LL + F+ ++ R W G+ +GLTL +KP+L P Sbjct 133 FVFFSTETVANTLIFTNFNAFVLLGMLAFMMLMI--RRHDLW-AGVPLGLTLAVKPVLAP 189 Query 212 LLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGN 271 LLLL LLNRQW+ L+ A+ +P + A P+ D M F T+T PY+ RDY+NSSI GN Sbjct 190 LLLLALLNRQWKVLITAIAIPAALMAVAWPIGVDAMDFVTKTAPYLFEARDYYNSSIAGN 249 Query 272 GVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLA 331 G YFG+ WL++ LR+ F A+ +LW LYRYYRT + L W +TSSGVLL+ ++LV SL Sbjct 250 GAYFGVAPWLVVLLRVAFVAMAVFSLWFLYRYYRTTNELLWLSTSSGVLLVTTFLVGSLG 309 Query 332 QGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYG 391 QGYYSM+LFP LM+VVLP S +RNWPAWLGVYG M D + W G LEY K+T+G Sbjct 310 QGYYSMLLFPLLMSVVLPGSPMRNWPAWLGVYGCMAFDSFYSERWNALGWILEYGKVTWG 369 Query 392 WSLLLIVTFTVLYFRYLDAKA 412 WSLL+I F L FRYLD ++ Sbjct 370 WSLLMIAVFCSLLFRYLDIRS 390 >gi|319948482|ref|ZP_08022616.1| hypothetical protein ES5_03888 [Dietzia cinnamea P4] gi|319437849|gb|EFV92835.1| hypothetical protein ES5_03888 [Dietzia cinnamea P4] Length=390 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 185/382 (49%), Positives = 244/382 (64%), Gaps = 5/382 (1%) Query 36 ILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYL 95 +L LWP A+++V+HR ++ NG+IT+DF VY A F G +Y E+ V PHYL Sbjct 6 VLAHVLWPLAIMTVIHRVLIRAVNGSITNDFGTVYAATRRFLAGEPVYAENLLTVQPHYL 65 Query 96 YPPGGTLLMAPFGYLP-FAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAM 154 Y P GT ++APFG + + +R+LFI +NTAAI+ A +LL+R+F+ + S AAPA++LA Sbjct 66 YAPSGTFMLAPFGMIDNYTLARWLFIGLNTAAIIAALWLLMRLFDLDVRSFAAPAILLAA 125 Query 155 FATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLL 214 F TE VTNTLVFTN+NG I L +V FL +LL R R W G+AIGL+L +KP+L PLL+ Sbjct 126 FCTEAVTNTLVFTNVNGVIFLCQVAFL-YLLHRR--RLWWAGVAIGLSLAVKPMLAPLLV 182 Query 215 LPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVY 274 LPL+ RQW+ V A +P V A L D S+ TL Y+ RDY+NSS+ G G+Y Sbjct 183 LPLIRRQWQPFVTAAAIPAVAMAAGWALTVDARSYVDTTLAYMGEVRDYYNSSLAGLGLY 242 Query 275 FGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGY 334 +G+P LIL RIL A T A+WLL YR + W T+SGV+L +LV +L Q Y Sbjct 243 YGVPEPLILIARILVVAATLLAVWLLLE-YRHNHEVLWLATTSGVVLSGVFLVSTLGQMY 301 Query 335 YSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSL 394 YSMML P ++TVVL S++RNWPAWL YGF TLD W W +GR LE+ T GW L Sbjct 302 YSMMLIPIMLTVVLDRSLVRNWPAWLAAYGFFTLDFWESTRWPYYGRLLEFAHPTLGWLL 361 Query 395 LLIVTFTVLYFRYLDAKADNRL 416 LL VL +R D + R+ Sbjct 362 LLATVLVVLLWRRSDPRRHERI 383 >gi|259507402|ref|ZP_05750302.1| membrane protein [Corynebacterium efficiens YS-314] gi|259165027|gb|EEW49581.1| membrane protein [Corynebacterium efficiens YS-314] Length=434 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 167/360 (47%), Positives = 228/360 (64%), Gaps = 5/360 (1%) Query 42 WPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGT 101 WP A+L + HR +L NG++TDDF VY A+ F G +YNE + +VDPHYLY PG T Sbjct 7 WPLAILLMAHRFFILAVNGSVTDDFTTVYSALRRFIEGTPVYNEIYHFVDPHYLYNPGAT 66 Query 102 LLMAPFGYL-PFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETV 160 LL+AP GY+ F +R FI+IN AI++A LL RM F+L S+ P I TE V Sbjct 67 LLLAPLGYITDFTLARLAFIAINLLAIVLALGLLTRMTGFSLRSMVWPLSIALAMLTEAV 126 Query 161 TNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNR 220 NTL+F+NING +LL+ VLFL W + R R W GGL IGL +++KP+ PLL LPL+ + Sbjct 127 RNTLIFSNINGILLLMMVLFL-WCVIHR--RSWVGGLIIGLAILVKPMFLPLLFLPLVQK 183 Query 221 QWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTW 280 QW ALV ++VPV+ N A PLV + TRT+PY+ TRD+ NSS+ G +YFG+P W Sbjct 184 QWGALVGGILVPVIFNAVAWPLVPGASDYITRTVPYLGETRDFANSSLPGIAIYFGMPGW 243 Query 281 LILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLF 340 L L ++F A+ A+ L R +R +P FW T+SG+LL + + SL Q YYSMM+F Sbjct 244 LELTAFLIFGAMVGIAVLALLR-FRNTEPFFWAATTSGILLTGVFFLSSLGQMYYSMMIF 302 Query 341 PFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTF 400 P + T++ SV +W AW+ Y F+T + +W R +E+ + T GWSLL+ VTF Sbjct 303 PMMFTLLGTRSVFHHWMAWVAAYLFLTPASFASPHWPDIARWMEFFRATAGWSLLIAVTF 362 >gi|25028346|ref|NP_738400.1| hypothetical protein CE1790 [Corynebacterium efficiens YS-314] gi|23493631|dbj|BAC18600.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=470 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 167/360 (47%), Positives = 228/360 (64%), Gaps = 5/360 (1%) Query 42 WPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGT 101 WP A+L + HR +L NG++TDDF VY A+ F G +YNE + +VDPHYLY PG T Sbjct 43 WPLAILLMAHRFFILAVNGSVTDDFTTVYSALRRFIEGTPVYNEIYHFVDPHYLYNPGAT 102 Query 102 LLMAPFGYL-PFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETV 160 LL+AP GY+ F +R FI+IN AI++A LL RM F+L S+ P I TE V Sbjct 103 LLLAPLGYITDFTLARLAFIAINLLAIVLALGLLTRMTGFSLRSMVWPLSIALAMLTEAV 162 Query 161 TNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNR 220 NTL+F+NING +LL+ VLFL W + R R W GGL IGL +++KP+ PLL LPL+ + Sbjct 163 RNTLIFSNINGILLLMMVLFL-WCVIHR--RSWVGGLIIGLAILVKPMFLPLLFLPLVQK 219 Query 221 QWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTW 280 QW ALV ++VPV+ N A PLV + TRT+PY+ TRD+ NSS+ G +YFG+P W Sbjct 220 QWGALVGGILVPVIFNAVAWPLVPGASDYITRTVPYLGETRDFANSSLPGIAIYFGMPGW 279 Query 281 LILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLF 340 L L ++F A+ A+ L R +R +P FW T+SG+LL + + SL Q YYSMM+F Sbjct 280 LELTAFLIFGAMVGIAVLALLR-FRNTEPFFWAATTSGILLTGVFFLSSLGQMYYSMMIF 338 Query 341 PFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTF 400 P + T++ SV +W AW+ Y F+T + +W R +E+ + T GWSLL+ VTF Sbjct 339 PMMFTLLGTRSVFHHWMAWVAAYLFLTPASFASPHWPDIARWMEFFRATAGWSLLIAVTF 398 >gi|317507235|ref|ZP_07964984.1| hypothetical protein HMPREF9336_01356 [Segniliparus rugosus ATCC BAA-974] gi|316254473|gb|EFV13794.1| hypothetical protein HMPREF9336_01356 [Segniliparus rugosus ATCC BAA-974] Length=434 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 177/423 (42%), Positives = 253/423 (60%), Gaps = 36/423 (8%) Query 34 ATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPH 93 A L +ALWP AV+SVLHR+++L N +ITDDF PVY A L F +Y ++ D V+PH Sbjct 12 AKALNAALWPIAVMSVLHRTMILAVNEHITDDFNPVYEAGLAFLNHRPVYTQNLDQVEPH 71 Query 94 YLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILA 153 YLYPP GTLL++P + +R LFI+ +AAI+ A LLL+ F+ L S A PAL+ A Sbjct 72 YLYPPSGTLLLSPITHFDPITARLLFIAGTSAAIIAACLLLLKFFDLPLRSFATPALLAA 131 Query 154 MFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLL 213 +F TE+VTNTL FTN+NG + L E +F LL + R W G A+GLT +KP+L PLL Sbjct 132 VFLTESVTNTLTFTNVNGFVFLAEAIF---LLCVKHDRPWLAGSALGLTFAVKPILAPLL 188 Query 214 LLPLLNRQWRALVAAVVVPVVVNVAALPLVSDP---------MSFFTRTLPYILGTRDYF 264 L+PL+ R W+ AA VP + VA+L +DP + ++ + +PY+ RDY+ Sbjct 189 LIPLVLRWWKTFAAAFAVPAALLVASLLYSADPGELLYSQDAVKYYRQVVPYLGKPRDYY 248 Query 265 NSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWS 324 NS+I G G Y+G+ L+L LR + A+ +LW LYR +R D + W T++G+ L+ + Sbjct 249 NSAIEGVGAYYGVNPVLLLLLRAVLGALVLISLWWLYRRFRHRDLVLWAATTAGLALVAT 308 Query 325 WLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRW----- 379 +++ SL QGYYS+ L P ++VV S +R+W WLG+YG M+LD W +R Sbjct 309 FVLGSLGQGYYSLFLVPMALSVVRAGSPMRSWVPWLGLYGCMSLDFWEFNQPLRHERPPR 368 Query 380 ---------GRALEYLKITYGWSLLLIVTFTVLYFRYLDAKADNRLDGGIDPAWLTPERE 430 GRA+EYLK T+GW+L+++ F L+ AK G + E E Sbjct 369 DLLVFLYPKGRAMEYLKFTFGWTLVIVGVFAALWL----AKGTKDERGEAE------ETE 418 Query 431 GQR 433 G+R Sbjct 419 GER 421 >gi|336325716|ref|YP_004605682.1| arabinofuranosyl transferase C [Corynebacterium resistens DSM 45100] gi|336101698|gb|AEI09518.1| arabinofuranosyl transferase C [Corynebacterium resistens DSM 45100] Length=444 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 155/400 (39%), Positives = 225/400 (57%), Gaps = 5/400 (1%) Query 23 GFRPRTGAPSTATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDI 82 G + + +L +WP A ++ +H++ ++ N + TDDF V A+ FR + Sbjct 33 GLIAKLSGARASLVLTIIMWPLAAMTAIHKTFLVPYNDHPTDDFTTVISALRRFRDHVPV 92 Query 83 YNEHFDYVDPHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTL 142 YNE + VDPHYLY PGGTLL++P YLP R +I +N A +A +L ++F F+L Sbjct 93 YNEDYSTVDPHYLYSPGGTLLLSPLAYLPEHLGRPAYIVLNALAAFLAIVVLTKLFRFSL 152 Query 143 TSVAAPALILAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLT 202 P A+F+TE++ NTL+F+NING +L E LF+ L+ R GL IGL Sbjct 153 FGPILPTATFALFSTESINNTLLFSNINGLLLFAEALFIYLLI---YRRNVLAGLVIGLA 209 Query 203 LVLKPLLGPLLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRD 262 + +KP PLL LPL+ RQ + VP+ N+AALPL+ P + + +PY+ TRD Sbjct 210 IAIKPQFAPLLFLPLVRRQVSTAAVGIGVPIAFNLAALPLMVSPGDYLNKLVPYLGQTRD 269 Query 263 YFNSSILGNGVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLL 322 Y NSSI G Y G IL R + A ++ L R +R D + W TT++GVLL+ Sbjct 270 YANSSIAGIMTYLGFSDVTILVWRGIAAACVIVSIVFLLR-WRDRDEVMWVTTTAGVLLV 328 Query 323 WSWLVMSLAQGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRA 382 +L+ SL Q YYSM+L P TV+ SV+ + AWLG+Y M+LD W+ W+ GR Sbjct 329 GVFLISSLGQMYYSMLLVPMFFTVLSNRSVMHSPIAWLGLYFCMSLDEWMSDRWVWAGRI 388 Query 383 LEYLKITYGWSLLLI-VTFTVLYFRYLDAKADNRLDGGID 421 EY + T GW LLL+ VT T++ + ++ K + G I Sbjct 389 FEYSRGTIGWGLLLVSVTTTIVVWTMVERKQGRHILGDIH 428 >gi|62390736|ref|YP_226138.1| hypothetical protein cg2077 [Corynebacterium glutamicum ATCC 13032] gi|21324666|dbj|BAB99290.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] gi|41326074|emb|CAF20237.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] Length=418 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 157/367 (43%), Positives = 228/367 (63%), Gaps = 5/367 (1%) Query 35 TILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHY 94 +I + WP A+L + HR VL NG +TDDF VY A+ F G +YNE + +VDPHY Sbjct 22 SIGNAVAWPLAMLLMAHRFFVLAINGAVTDDFTTVYSALRRFVEGIPVYNEVYHFVDPHY 81 Query 95 LYPPGGTLLMAPFGYLP-FAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILA 153 LY PG TLL+AP GY+ F +R++FI++N AI++A LL R+ + L S+ P I Sbjct 82 LYNPGATLLLAPLGYITHFTLARWMFIAVNLLAIVLAFGLLTRLSGWALRSMVWPIAIAL 141 Query 154 MFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLL 213 TETV NTL+F+NING +LL+ +FL W + + + W GGL IGL +++KP+ PLL Sbjct 142 AMLTETVQNTLIFSNINGILLLMLAIFL-WCVVHK--KSWLGGLVIGLAILIKPMFLPLL 198 Query 214 LLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGV 273 LPL+ +QW +L+ ++ PV+ N A LV + TRT+PY+ TRD+ NSS+ G + Sbjct 199 FLPLVKKQWGSLILGILTPVIFNAVAWFLVPGASEYVTRTMPYLGETRDFANSSLPGLAI 258 Query 274 YFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQG 333 YFG+PTW+ + ++F A+ A+ L R +R +P FW T++GVLL + + SL Q Sbjct 259 YFGMPTWMEITWFLIFGAMVGLAVLALLR-FRNTEPYFWAATTTGVLLTGVFFLSSLGQM 317 Query 334 YYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWS 393 YYSMM+FP + T++ SV NW AW+ Y F++ D + R +E+ T GW Sbjct 318 YYSMMIFPMIFTLLGSRSVFHNWVAWVAAYFFLSPDTFTSQRLPDVARWMEFFSATVGWG 377 Query 394 LLLIVTF 400 LL++VTF Sbjct 378 LLIVVTF 384 >gi|145295801|ref|YP_001138622.1| hypothetical protein cgR_1726 [Corynebacterium glutamicum R] gi|140845721|dbj|BAF54720.1| hypothetical protein [Corynebacterium glutamicum R] Length=418 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 157/367 (43%), Positives = 228/367 (63%), Gaps = 5/367 (1%) Query 35 TILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHY 94 +I + WP A+L + HR VL NG +TDDF VY A+ F G +YNE + +VDPHY Sbjct 22 SIGNAVAWPLAMLLMAHRFFVLAINGAVTDDFTTVYSALRRFVEGIPVYNEVYHFVDPHY 81 Query 95 LYPPGGTLLMAPFGYLP-FAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILA 153 LY PG TLL+AP GY+ F +R++FI++N AI++A LL R+ + L S+ P I Sbjct 82 LYNPGATLLLAPLGYITHFTLARWMFIAVNLLAIVLAFGLLTRLSGWALRSMVWPIAIAL 141 Query 154 MFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLL 213 TETV NTL+F+NING +LL+ +FL W + + + W GGL IGL +++KP+ PLL Sbjct 142 AMLTETVQNTLIFSNINGILLLMLAIFL-WCVVHK--KSWLGGLVIGLAILIKPMFLPLL 198 Query 214 LLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGV 273 LPL+ +QW +L+ ++ PV+ N A LV + TRT+PY+ TRD+ NSS+ G + Sbjct 199 FLPLVKKQWGSLILGILTPVIFNAVAWFLVPGASDYVTRTMPYLGETRDFANSSLPGLAI 258 Query 274 YFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQG 333 YFG+PTW+ + ++F A+ A+ L R +R +P FW T++GVLL + + SL Q Sbjct 259 YFGMPTWMEITWFLIFGAMVGLAVLALLR-FRNTEPYFWAATTTGVLLTGVFFLSSLGQM 317 Query 334 YYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWS 393 YYSMM+FP + T++ SV NW AW+ Y F++ D + R +E+ T GW Sbjct 318 YYSMMIFPMIFTLLGSRSVFHNWVAWVAAYFFLSPDTFTSQRLPDVARWMEFFSATIGWG 377 Query 394 LLLIVTF 400 LL++VTF Sbjct 378 LLIVVTF 384 >gi|296394057|ref|YP_003658941.1| hypothetical protein Srot_1649 [Segniliparus rotundus DSM 44985] gi|296181204|gb|ADG98110.1| Protein of unknown function DUF2029 [Segniliparus rotundus DSM 44985] Length=430 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 165/388 (43%), Positives = 235/388 (61%), Gaps = 19/388 (4%) Query 32 STATILRSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVD 91 S A L +ALWP AV+SVLHR+I+L N +ITDDF PVY+A L F +Y ++ V+ Sbjct 16 SGAKALNAALWPIAVMSVLHRTIILAVNEHITDDFTPVYQAGLAFLNHRPVYTQNLGQVE 75 Query 92 PHYLYPPGGTLLMAPFGYLPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALI 151 PHYLY P GTLL+ P + +R +FI+ +AAI+ A LLL+ F L S A PAL+ Sbjct 76 PHYLYAPSGTLLLCPITHFDPITARLIFIAATSAAIIAACVLLLKFFELPLRSFATPALL 135 Query 152 LAMFATETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGP 211 A+F TE+ TNTL FTN+NG I L E FL L + +R W G +GLT +KP+L P Sbjct 136 AAVFLTESATNTLTFTNVNGFIFLAEAGFL---LCVKHNRPWLAGSVLGLTFAVKPILAP 192 Query 212 LLLLPLLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGN 271 LLL+PLL R W+ V A+ +P V+ V D +++ +PYI RDY+NS+I G Sbjct 193 LLLIPLLLRWWKTFVVALALPAVLLVIGQLCSVDADKYYSDVVPYISKPRDYYNSAIQGV 252 Query 272 GVYFGLPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLA 331 G Y+G+ WL+ +R++ A+ +LW L++ +R D W ++G+ L+ ++L+ SL Sbjct 253 GAYYGVAPWLLSVVRVVLGALVLISLWWLHQRFRRTDLQLWAAMTAGLTLVATFLIGSLG 312 Query 332 QGYYSMMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRW---------------LLFNW 376 QGYYS+ L P + VV P S +R W WLG+YG M+LD W L+F + Sbjct 313 QGYYSLFLVPMALCVVRPRSPMRAWAPWLGLYGCMSLDFWEFNQPLHHENPPRDLLIFLY 372 Query 377 MRWGRALEYLKITYGWSLLLIVTFTVLY 404 + GR EYLK T+GW++L++ F L+ Sbjct 373 PK-GRDAEYLKFTFGWTVLIVGVFAALW 399 >gi|19553101|ref|NP_601103.1| hypothetical protein NCgl1822 [Corynebacterium glutamicum ATCC 13032] Length=386 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 152/351 (44%), Positives = 219/351 (63%), Gaps = 5/351 (1%) Query 51 HRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYL 110 HR VL NG +TDDF VY A+ F G +YNE + +VDPHYLY PG TLL+AP GY+ Sbjct 6 HRFFVLAINGAVTDDFTTVYSALRRFVEGIPVYNEVYHFVDPHYLYNPGATLLLAPLGYI 65 Query 111 P-FAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNI 169 F +R++FI++N AI++A LL R+ + L S+ P I TETV NTL+F+NI Sbjct 66 THFTLARWMFIAVNLLAIVLAFGLLTRLSGWALRSMVWPIAIALAMLTETVQNTLIFSNI 125 Query 170 NGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAV 229 NG +LL+ +FL W + + + W GGL IGL +++KP+ PLL LPL+ +QW +L+ + Sbjct 126 NGILLLMLAIFL-WCVVHK--KSWLGGLVIGLAILIKPMFLPLLFLPLVKKQWGSLILGI 182 Query 230 VVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILF 289 + PV+ N A LV + TRT+PY+ TRD+ NSS+ G +YFG+PTW+ + ++F Sbjct 183 LTPVIFNAVAWFLVPGASEYVTRTMPYLGETRDFANSSLPGLAIYFGMPTWMEITWFLIF 242 Query 290 TAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLP 349 A+ A+ L R +R +P FW T++GVLL + + SL Q YYSMM+FP + T++ Sbjct 243 GAMVGLAVLALLR-FRNTEPYFWAATTTGVLLTGVFFLSSLGQMYYSMMIFPMIFTLLGS 301 Query 350 NSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTF 400 SV NW AW+ Y F++ D + R +E+ T GW LL++VTF Sbjct 302 RSVFHNWVAWVAAYFFLSPDTFTSQRLPDVARWMEFFSATVGWGLLIVVTF 352 >gi|344044032|gb|EGV39713.1| hypothetical protein CgS9114_11027 [Corynebacterium glutamicum S9114] Length=386 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 152/351 (44%), Positives = 219/351 (63%), Gaps = 5/351 (1%) Query 51 HRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGTLLMAPFGYL 110 HR VL NG +TDDF VY A+ F G +YNE + +VDPHYLY PG TLL+AP GY+ Sbjct 6 HRFFVLAINGAVTDDFTTVYSALRRFVEGIPVYNEVYHFVDPHYLYNPGATLLLAPLGYI 65 Query 111 P-FAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETVTNTLVFTNI 169 F +R++FI++N AI++A LL R+ + L S+ P I TETV NTL+F+NI Sbjct 66 THFTLARWMFIAVNLLAIVLAFGLLTRLSGWALRSMVWPIAIALAMLTETVQNTLIFSNI 125 Query 170 NGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNRQWRALVAAV 229 NG +LL+ +FL W + + + W GGL IGL +++KP+ PLL LPL+ +QW +L+ + Sbjct 126 NGILLLMLAIFL-WCVVHK--KSWLGGLVIGLAILIKPMFLPLLFLPLVKKQWGSLILGI 182 Query 230 VVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTWLILFLRILF 289 + PV+ N A LV + TRT+PY+ TRD+ NSS+ G +YFG+PTW+ + ++F Sbjct 183 LTPVIFNAVAWFLVPGASDYVTRTMPYLGETRDFANSSLPGLAIYFGMPTWMEITWFLIF 242 Query 290 TAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLFPFLMTVVLP 349 A+ A+ L R +R +P FW T++GVLL + + SL Q YYSMM+FP + T++ Sbjct 243 GAMVGLAVLALLR-FRNTEPYFWAATTTGVLLTGVFFLSSLGQMYYSMMIFPMIFTLLGS 301 Query 350 NSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLLIVTF 400 SV NW AW+ Y F++ D + R +E+ T GW LL++VTF Sbjct 302 RSVFHNWVAWVAAYFFLSPDTFTSQRLPDVARWMEFFSATIGWGLLIVVTF 352 >gi|334564732|ref|ZP_08517723.1| hypothetical protein CbovD2_09157 [Corynebacterium bovis DSM 20582] Length=401 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 163/354 (47%), Positives = 218/354 (62%), Gaps = 5/354 (1%) Query 42 WPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYPPGGT 101 WP A+++ LHR ++ N + TDDF V+ A+ FR G +Y+E++ +VDPHYLY PGGT Sbjct 3 WPVAIMTFLHRVFLVPQNAHPTDDFTTVFSALTRFRDGVPVYDENYSFVDPHYLYSPGGT 62 Query 102 LLMAPFGYLPFAP-SRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFATETV 160 LL++P +LP R +FI N A++VA LL RM L P + F TE+V Sbjct 63 LLLSPLAWLPGHDLGRLVFIVANAVAVVVALALLTRMCGRPLRGGTWPVAVALAFMTESV 122 Query 161 TNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLPLLNR 220 TNTL+F+NING +LLLEVLF+ WLL GR G+A+GL + +KP+ PLL+LPLL Sbjct 123 TNTLLFSNINGVLLLLEVLFMLWLLRGRTV---LSGVALGLAITVKPIFAPLLVLPLLRG 179 Query 221 QWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFGLPTW 280 +W +V+ + VPVV AA PL P + +PY+ RDY NSS+ G GVY+GLP Sbjct 180 RWATVVSGIAVPVVFTAAAWPLTVRPGDYVHTVMPYLGVVRDYANSSLSGVGVYYGLPPA 239 Query 281 LILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYSMMLF 340 L L LR+L T + G +L +R D L W TTSSGV+L +L SL Q YYSM++F Sbjct 240 LTLILRVL-TIVLVGLSVVLLLQWRKSDELLWVTTSSGVILTGVFLASSLGQMYYSMLIF 298 Query 341 PFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSL 394 P + TVVL SV+ N AW G+Y ++ D W W+ WGR EY + T GW L Sbjct 299 PMVFTVVLRRSVMHNPVAWFGLYLCLSPDVWSSDRWVWWGRIAEYTRGTVGWGL 352 >gi|337290912|ref|YP_004629933.1| arabinofuranosyl transferase C [Corynebacterium ulcerans BR-AD22] gi|334699218|gb|AEG84014.1| arabinofuranosyl transferase C [Corynebacterium ulcerans BR-AD22] Length=426 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 157/382 (42%), Positives = 224/382 (59%), Gaps = 6/382 (1%) Query 38 RSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYP 97 + AL+P A+ V++ VL NG+ITDDF VY A+ F G +YNE + +VDPHYLY Sbjct 45 KKALYPLAIGLVIYSVAVLGVNGSITDDFSTVYNALRRFLDGVPVYNETYYFVDPHYLYN 104 Query 98 PGGTLLMAPFGY-LPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFA 156 PG T+L++P FA R +FI N AAI+ A LL R+F ++L S P +I F Sbjct 105 PGATVLLSPIALGTHFAFQRLVFIIANAAAIIAALALLTRLFGYSLKSAVFPLVIALAFL 164 Query 157 TETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLP 216 TE V NTL+F+NING +LL V FLR LD +R+W G+ IGL +V+KP+ P+L +P Sbjct 165 TEAVRNTLIFSNINGVLLLAFVAFLRLTLD---NRRWWAGIIIGLAIVVKPVFLPVLFIP 221 Query 217 LLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFG 276 L+ W+ L AA+ +P+V N+A LV + +RT PY+ RDY NSS+ G VYFG Sbjct 222 LVLLHWQTLCAALGIPIVTNIAGWFLVPGASEYLSRTAPYLKEVRDYANSSLRGMAVYFG 281 Query 277 LPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYS 336 PTW+ F +LF + + L + +R+ +PL W T+++ +LLL + + SL Q YYS Sbjct 282 APTWVSAFFFVLFAGLVIAGILFLLQ-WRSKEPLLWITSTASLLLLAGFFLSSLGQMYYS 340 Query 337 MMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLL 396 M LFP L TV+L S + W AW+G + W W G L + T+GW LL+ Sbjct 341 MTLFPLLFTVLLSRSPMHTWTAWIGALLVLAPFDWTSSYWPVVGPWLTTFQATFGWGLLI 400 Query 397 I-VTFTVLYFRYLDAKADNRLD 417 I ++ + + +R D L+ Sbjct 401 IAISVSAMAWRQEDVNNAAALN 422 >gi|334697025|gb|AEG81822.1| arabinofuranosyl transferase C [Corynebacterium ulcerans 809] Length=426 Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 153/376 (41%), Positives = 220/376 (59%), Gaps = 6/376 (1%) Query 38 RSALWPAAVLSVLHRSIVLTTNGNITDDFKPVYRAVLNFRRGWDIYNEHFDYVDPHYLYP 97 + AL+P A+ V++ VL NG+ITDDF VY A+ F G +YNE + +VDPHYLY Sbjct 45 KKALYPLAIGLVIYSVAVLGVNGSITDDFSTVYNALRRFLDGVPVYNETYYFVDPHYLYN 104 Query 98 PGGTLLMAPFGY-LPFAPSRYLFISINTAAILVAAYLLLRMFNFTLTSVAAPALILAMFA 156 PG T+L++P FA R +FI N AAI+ A LL R+F ++L S P ++ F Sbjct 105 PGATVLLSPIALGTHFAFQRLVFIIANAAAIIAALALLTRLFGYSLKSAVFPLVVALAFL 164 Query 157 TETVTNTLVFTNINGCILLLEVLFLRWLLDGRASRQWCGGLAIGLTLVLKPLLGPLLLLP 216 TE V NTL+F+NING +LL V FLR LD +R+W G+ IGL +V+KP+ P+L +P Sbjct 165 TEAVRNTLIFSNINGVLLLAFVAFLRLTLD---NRRWWAGIIIGLAIVVKPVFLPVLFIP 221 Query 217 LLNRQWRALVAAVVVPVVVNVAALPLVSDPMSFFTRTLPYILGTRDYFNSSILGNGVYFG 276 L+ W+ L AA+ +P+V N+ LV + +RT PY+ RDY NSS+ G VYFG Sbjct 222 LVLLHWQTLCAALGIPIVTNIVGWFLVPGASEYLSRTAPYLKEVRDYANSSLRGMAVYFG 281 Query 277 LPTWLILFLRILFTAITFGALWLLYRYYRTGDPLFWFTTSSGVLLLWSWLVMSLAQGYYS 336 P W+ F +LF + + L ++R+ +PL W T+++ +LLL + + SL Q YYS Sbjct 282 APAWVSAFFFVLFAGLVIAGI-LFLLHWRSKEPLLWITSTASLLLLAGFFLSSLGQMYYS 340 Query 337 MMLFPFLMTVVLPNSVIRNWPAWLGVYGFMTLDRWLLFNWMRWGRALEYLKITYGWSLLL 396 M LFP L TV+L S + W AW+G + W W G L + T+GW LL+ Sbjct 341 MTLFPLLFTVLLSRSPMHTWTAWIGALLVLAPFDWTSSYWPVVGPWLTTFQATFGWGLLI 400 Query 397 I-VTFTVLYFRYLDAK 411 I ++ + + +R D Sbjct 401 IAISVSAMAWRQADVN 416 Lambda K H 0.329 0.144 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 882190705060 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40