BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2683
Length=165
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609820|ref|NP_217199.1| hypothetical protein Rv2683 [Mycoba... 326 9e-88
gi|31793855|ref|NP_856348.1| hypothetical protein Mb2702 [Mycoba... 324 3e-87
gi|340627684|ref|YP_004746136.1| hypothetical protein MCAN_27091... 323 6e-87
gi|308369827|ref|ZP_07419202.2| hypothetical protein TMBG_02820 ... 288 2e-76
gi|254821713|ref|ZP_05226714.1| hypothetical protein MintA_17397... 258 1e-67
gi|118618649|ref|YP_906981.1| hypothetical protein MUL_3320 [Myc... 244 3e-63
gi|342858446|ref|ZP_08715101.1| CBS domain-containing protein [M... 243 5e-63
gi|240169719|ref|ZP_04748378.1| hypothetical protein MkanA1_1042... 243 6e-63
gi|41408902|ref|NP_961738.1| hypothetical protein MAP2804 [Mycob... 238 2e-61
gi|183982045|ref|YP_001850336.1| hypothetical protein MMAR_2031 ... 237 4e-61
gi|118464939|ref|YP_882755.1| CBS domain-containing protein [Myc... 236 6e-61
gi|336458817|gb|EGO37774.1| CBS domain-containing protein [Mycob... 236 8e-61
gi|15827502|ref|NP_301765.1| hypothetical protein ML1037 [Mycoba... 234 2e-60
gi|333991069|ref|YP_004523683.1| hypothetical protein JDM601_242... 218 3e-55
gi|300785626|ref|YP_003765917.1| hypothetical protein AMED_3736 ... 196 1e-48
gi|300787610|ref|YP_003767901.1| hypothetical protein AMED_5750 ... 184 3e-45
gi|294994224|ref|ZP_06799915.1| hypothetical protein Mtub2_06848... 173 7e-42
gi|300788418|ref|YP_003768709.1| hypothetical protein AMED_6580 ... 168 3e-40
gi|340530020|gb|AEK45225.1| hypothetical protein RAM_33760 [Amyc... 166 1e-39
gi|284028455|ref|YP_003378386.1| putative signal transduction pr... 163 7e-39
gi|302527271|ref|ZP_07279613.1| CBS domain-containing protein [S... 159 1e-37
gi|345008134|ref|YP_004810488.1| sodium/hydrogen exchanger [Stre... 132 1e-29
gi|291298032|ref|YP_003509310.1| CBS domain-containing protein [... 131 3e-29
gi|296268014|ref|YP_003650646.1| CBS domain-containing protein [... 126 9e-28
gi|269125949|ref|YP_003299319.1| CBS domain containing protein [... 102 2e-20
gi|336120134|ref|YP_004574912.1| hypothetical protein MLP_44950 ... 99.4 2e-19
gi|302543782|ref|ZP_07296124.1| CBS domain protein [Streptomyces... 98.2 3e-19
gi|269128359|ref|YP_003301729.1| CBS domain containing protein [... 88.2 3e-16
gi|118467949|ref|YP_885255.1| CBS domain-containing protein [Myc... 86.3 1e-15
gi|108797568|ref|YP_637765.1| signal transduction protein [Mycob... 83.2 1e-14
gi|119866654|ref|YP_936606.1| signal transduction protein [Mycob... 83.2 1e-14
gi|297195954|ref|ZP_06913352.1| CBS domain-containing protein [S... 75.5 3e-12
gi|188584946|ref|YP_001916491.1| CBS domain containing membrane ... 49.7 2e-04
gi|328952455|ref|YP_004369789.1| hypothetical protein [Desulfoba... 48.1 5e-04
gi|115523746|ref|YP_780657.1| signal-transduction protein [Rhodo... 47.4 7e-04
gi|313672485|ref|YP_004050596.1| cbs domain containing protein [... 46.6 0.001
gi|90425526|ref|YP_533896.1| signal-transduction protein [Rhodop... 46.6 0.001
gi|91200743|emb|CAJ73795.1| hypothetical protein kuste3040 [Cand... 45.8 0.002
gi|108803862|ref|YP_643799.1| CBS domain-containing protein [Rub... 45.4 0.003
gi|289523028|ref|ZP_06439882.1| putative CBS domain pair [Anaero... 44.7 0.005
gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [... 44.3 0.005
gi|78357089|ref|YP_388538.1| hypothetical protein Dde_2046 [Desu... 44.3 0.006
gi|13542143|ref|NP_111831.1| CBS domain-containing protein [Ther... 43.1 0.014
gi|296132180|ref|YP_003639427.1| CBS domain containing membrane ... 43.1 0.014
gi|85710518|ref|ZP_01041582.1| glycerol-3-phosphate dehydrogenas... 42.7 0.017
gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039... 42.0 0.030
gi|261403128|ref|YP_003247352.1| putative signal transduction pr... 42.0 0.033
gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 ... 41.6 0.038
gi|86748490|ref|YP_484986.1| signal-transduction protein [Rhodop... 41.2 0.048
gi|333911316|ref|YP_004485049.1| putative signal transduction pr... 41.2 0.057
>gi|15609820|ref|NP_217199.1| hypothetical protein Rv2683 [Mycobacterium tuberculosis H37Rv]
gi|15842221|ref|NP_337258.1| CBS domain-containing protein [Mycobacterium tuberculosis CDC1551]
gi|148662524|ref|YP_001284047.1| hypothetical protein MRA_2711 [Mycobacterium tuberculosis H37Ra]
42 more sequence titles
Length=165
Score = 326 bits (835), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK
Sbjct 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
Query 61 QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA
Sbjct 61 QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
Query 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT
Sbjct 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
>gi|31793855|ref|NP_856348.1| hypothetical protein Mb2702 [Mycobacterium bovis AF2122/97]
gi|121638558|ref|YP_978782.1| hypothetical protein BCG_2696 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991050|ref|YP_002645739.1| hypothetical protein JTY_2690 [Mycobacterium bovis BCG str. Tokyo
172]
18 more sequence titles
Length=165
Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)
Query 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK
Sbjct 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
Query 61 QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
QYAVLPASQVVRFIVPRYVQDDP LAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA
Sbjct 61 QYAVLPASQVVRFIVPRYVQDDPSLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
Query 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT
Sbjct 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
>gi|340627684|ref|YP_004746136.1| hypothetical protein MCAN_27091 [Mycobacterium canettii CIPT
140010059]
gi|340005874|emb|CCC45040.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=165
Score = 323 bits (828), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/165 (99%), Positives = 164/165 (99%), Gaps = 0/165 (0%)
Query 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
MKVN+DPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK
Sbjct 1 MKVNVDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
Query 61 QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
QYAVLPASQVVRFIVPRYVQDDP LAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA
Sbjct 61 QYAVLPASQVVRFIVPRYVQDDPSLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
Query 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT
Sbjct 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALKT 165
>gi|308369827|ref|ZP_07419202.2| hypothetical protein TMBG_02820 [Mycobacterium tuberculosis SUMu002]
gi|308371098|ref|ZP_07423811.2| hypothetical protein TMCG_01930 [Mycobacterium tuberculosis SUMu003]
gi|308372368|ref|ZP_07428408.2| hypothetical protein TMDG_00397 [Mycobacterium tuberculosis SUMu004]
11 more sequence titles
Length=147
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY
Sbjct 1 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS
Sbjct 61 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALKT 165
PLLAVVKDGSLLGVVTASRLLAAALKT
Sbjct 121 PLLAVVKDGSLLGVVTASRLLAAALKT 147
>gi|254821713|ref|ZP_05226714.1| hypothetical protein MintA_17397 [Mycobacterium intracellulare
ATCC 13950]
Length=147
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/147 (88%), Positives = 143/147 (98%), Gaps = 0/147 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAEQ+AED+PVVSID+DAL+AARMLAEHRLPGLLVT G+G+ YAVLPASQVVRFIVPRY
Sbjct 1 MRAEQIAEDFPVVSIDADALEAARMLAEHRLPGLLVTDGSGRPYAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNESTADRCAE+LSGKKVRDVLPDHLV+VPPA+ADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESTADRCAEKLSGKKVRDVLPDHLVDVPPAHADDTIIEVAALMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALKT 165
PL+AVVKDG L+GV+TASR+LAAALKT
Sbjct 121 PLVAVVKDGGLVGVITASRVLAAALKT 147
>gi|118618649|ref|YP_906981.1| hypothetical protein MUL_3320 [Mycobacterium ulcerans Agy99]
gi|118570759|gb|ABL05510.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=164
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/157 (80%), Positives = 135/157 (86%), Gaps = 0/157 (0%)
Query 8 TAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPA 67
T T ATY MRAE +AE+YPV+SIDSDAL+AAR LAEHRLPGLLVT G YAVLPA
Sbjct 7 TLTTPATYGHHMRAEDIAEEYPVISIDSDALEAARTLAEHRLPGLLVTKKTGSPYAVLPA 66
Query 68 SQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTII 127
SQVVRFIVPRYVQDDP LAGVLNES ADRCAE+L GKKV DVLPDHL +VPP NADDTII
Sbjct 67 SQVVRFIVPRYVQDDPSLAGVLNESMADRCAEKLRGKKVSDVLPDHLNDVPPVNADDTII 126
Query 128 EVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALK 164
EVAA+MARLRSPLLAVVK+G L GV+TASRLL AAL+
Sbjct 127 EVAALMARLRSPLLAVVKNGKLHGVITASRLLGAALR 163
>gi|342858446|ref|ZP_08715101.1| CBS domain-containing protein [Mycobacterium colombiense CECT
3035]
gi|342134150|gb|EGT87330.1| CBS domain-containing protein [Mycobacterium colombiense CECT
3035]
Length=147
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/145 (84%), Positives = 135/145 (94%), Gaps = 0/145 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAEQ+AED+PVVSI++DALDAARMLAEHRLPGLLVT +G+ YAVLPASQVVRFIVPRY
Sbjct 1 MRAEQIAEDFPVVSIEADALDAARMLAEHRLPGLLVTDSSGRPYAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+LSGK VRDVLPDHLV++PPANADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESMADRCAEKLSGKTVRDVLPDHLVDIPPANADDTIIEVAALMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAAL 163
PL+AV K G L+GV+TASR+L AAL
Sbjct 121 PLVAVAKQGRLIGVITASRVLEAAL 145
>gi|240169719|ref|ZP_04748378.1| hypothetical protein MkanA1_10427 [Mycobacterium kansasii ATCC
12478]
Length=147
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/146 (85%), Positives = 133/146 (92%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAE +AED+PVV ++S ALDAARMLAEHRLPGLLVT +GK YAVLPASQVVRFIVPRY
Sbjct 1 MRAEDIAEDFPVVDVNSSALDAARMLAEHRLPGLLVTKPSGKPYAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+LSGK VRDVLPDHLV+VPP NADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESMADRCAEKLSGKTVRDVLPDHLVDVPPVNADDTIIEVAAIMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PLL VVKD LLGV+TASRLLAAALK
Sbjct 121 PLLPVVKDRRLLGVITASRLLAAALK 146
>gi|41408902|ref|NP_961738.1| hypothetical protein MAP2804 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397261|gb|AAS05121.1| hypothetical protein MAP_2804 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=160
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/146 (81%), Positives = 135/146 (93%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA ++AED+PVVS+DSDALDA R+LAEHRLPG++VT +GK +AVLPASQVVRFIVPRY
Sbjct 14 MRAAELAEDFPVVSVDSDALDATRLLAEHRLPGIVVTDASGKPFAVLPASQVVRFIVPRY 73
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+L GK VRDVLPDHLV+VPPA+ADDTIIEVAA+MARLRS
Sbjct 74 VQDDPSLAGVLNESVADRCAEKLRGKTVRDVLPDHLVDVPPADADDTIIEVAALMARLRS 133
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PL+AVVKDG L+GV+TASR+L AAL+
Sbjct 134 PLVAVVKDGRLIGVITASRVLGAALR 159
>gi|183982045|ref|YP_001850336.1| hypothetical protein MMAR_2031 [Mycobacterium marinum M]
gi|183175371|gb|ACC40481.1| conserved protein [Mycobacterium marinum M]
Length=147
Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/146 (83%), Positives = 130/146 (90%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAE +AE+YPV+SIDSDAL+AAR LAEHRLPGLLVT G YAVLPASQVVRFIVPRY
Sbjct 1 MRAEDIAEEYPVISIDSDALEAARTLAEHRLPGLLVTKKTGSPYAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+L GKKV DVLPDHL +VPP NADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESMADRCAEKLRGKKVSDVLPDHLNDVPPVNADDTIIEVAALMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PLLAVVK+G L GV+TASRLL AAL+
Sbjct 121 PLLAVVKNGKLHGVITASRLLGAALR 146
>gi|118464939|ref|YP_882755.1| CBS domain-containing protein [Mycobacterium avium 104]
gi|254776019|ref|ZP_05217535.1| CBS domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118166226|gb|ABK67123.1| CBS domain protein [Mycobacterium avium 104]
Length=147
Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/146 (80%), Positives = 135/146 (93%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA ++AED+PVVS+DSDALDA R+LAEHRLPG++VT +GK +AVLPASQVVRFIVPRY
Sbjct 1 MRAAELAEDFPVVSVDSDALDATRLLAEHRLPGIVVTDASGKPFAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+L GK VRDVLPDHLV+VPPA+ADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESVADRCAEKLRGKTVRDVLPDHLVDVPPADADDTIIEVAALMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PL+AVVK+G L+GV+TASR+L AAL+
Sbjct 121 PLVAVVKEGRLIGVITASRVLGAALR 146
>gi|336458817|gb|EGO37774.1| CBS domain-containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=147
Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/146 (80%), Positives = 134/146 (92%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA ++AED+PVVS+DSDALDA R+LAEHRLPG++VT +GK +AVLPASQVVRFIVPRY
Sbjct 1 MRAAELAEDFPVVSVDSDALDATRLLAEHRLPGIVVTDASGKPFAVLPASQVVRFIVPRY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVLNES ADRCAE+L GK VRDVLPDHLV+VPP +ADDTIIEVAA+MARLRS
Sbjct 61 VQDDPSLAGVLNESVADRCAEKLRGKTVRDVLPDHLVDVPPVDADDTIIEVAALMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PL+AVVKDG L+GV+TASR+L AAL+
Sbjct 121 PLVAVVKDGRLIGVITASRVLGAALR 146
>gi|15827502|ref|NP_301765.1| hypothetical protein ML1037 [Mycobacterium leprae TN]
gi|221229979|ref|YP_002503395.1| hypothetical protein MLBr_01037 [Mycobacterium leprae Br4923]
gi|699165|gb|AAA62930.1| u1764q [Mycobacterium leprae]
gi|13093052|emb|CAC31418.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933086|emb|CAR71132.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=184
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/164 (74%), Positives = 136/164 (83%), Gaps = 0/164 (0%)
Query 1 MKVNIDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGK 60
+++++ T T TYR M AE +AED+P +SI+S ALDAARMLAEH LPGLLVT + K
Sbjct 20 VRLDVAHTPRTTQTYRHSMLAEDIAEDFPAISINSSALDAARMLAEHGLPGLLVTDMSDK 79
Query 61 QYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPA 120
YAVLPASQVVRFIVPRY+QDDP LAGVLNESTAD+ AE+LS KKVRDVLPDHLV V P
Sbjct 80 PYAVLPASQVVRFIVPRYIQDDPSLAGVLNESTADQAAEKLSSKKVRDVLPDHLVNVSPV 139
Query 121 NADDTIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAALK 164
NADDTIIEVAA M+R RSPLLAVVK G LLGV+TASRLL AALK
Sbjct 140 NADDTIIEVAATMSRQRSPLLAVVKGGQLLGVITASRLLRAALK 183
>gi|333991069|ref|YP_004523683.1| hypothetical protein JDM601_2429 [Mycobacterium sp. JDM601]
gi|333487037|gb|AEF36429.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=147
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/146 (76%), Positives = 129/146 (89%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRAE++AE++PVV+IDSDA+DAAR+LAEHRLPG++V AG+ +AVLPASQVVRFIVP Y
Sbjct 1 MRAEEIAEEFPVVAIDSDAVDAARLLAEHRLPGIVVVDAAGQPHAVLPASQVVRFIVPGY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LAGVL+ES ADR AE+L GK VRDVLP+HL E+P A A T+IEVA+ MARLRS
Sbjct 61 VQDDPSLAGVLSESAADRAAEKLRGKAVRDVLPEHLPELPTAGATHTLIEVASTMARLRS 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PL+AVVKDG LLGV+TASRLLAAALK
Sbjct 121 PLIAVVKDGKLLGVITASRLLAAALK 146
>gi|300785626|ref|YP_003765917.1| hypothetical protein AMED_3736 [Amycolatopsis mediterranei U32]
gi|299795140|gb|ADJ45515.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340527086|gb|AEK42291.1| hypothetical protein RAM_19025 [Amycolatopsis mediterranei S699]
Length=172
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/159 (63%), Positives = 127/159 (80%), Gaps = 0/159 (0%)
Query 5 IDPTAPTFATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAV 64
++P +P +Y M A +MAE+YPVV +DSDALDAAR+LAE RLPGL+VT AG +V
Sbjct 11 VNPASPVGTSYAGTMHAVEMAEEYPVVELDSDALDAARLLAERRLPGLVVTDKAGCPQSV 70
Query 65 LPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADD 124
LPASQVVRF+VP YV+DDP LAGVLNES ADR A++L G+ VR +LP+ + E+P N+DD
Sbjct 71 LPASQVVRFLVPSYVRDDPSLAGVLNESMADRVADKLGGRTVRSLLPEEVTELPRVNSDD 130
Query 125 TIIEVAAVMARLRSPLLAVVKDGSLLGVVTASRLLAAAL 163
TI+EVAA+MARLR PL+AV++D +L GV++ASRLL AL
Sbjct 131 TIVEVAAMMARLRCPLVAVMEDRTLNGVISASRLLQLAL 169
>gi|300787610|ref|YP_003767901.1| hypothetical protein AMED_5750 [Amycolatopsis mediterranei U32]
gi|299797124|gb|ADJ47499.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340529146|gb|AEK44351.1| hypothetical protein RAM_29380 [Amycolatopsis mediterranei S699]
Length=148
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/145 (65%), Positives = 119/145 (83%), Gaps = 0/145 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M A +MAE+YPVV +DSDALDAAR+LAE RLPGL+VT G +VLPASQVV+F++P Y
Sbjct 1 MHAAEMAEEYPVVELDSDALDAARLLAERRLPGLVVTDKTGCPQSVLPASQVVQFLIPNY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V+DDP LAGVLNES ADR A++L+GK VR +LP+ E+P ++DDTI+EVAA+MARLR
Sbjct 61 VRDDPSLAGVLNESMADRVADKLAGKTVRSLLPEKATELPRVSSDDTIVEVAAMMARLRC 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAAL 163
PL+AV++ +LLGVV+ASRLL AL
Sbjct 121 PLVAVMEGKTLLGVVSASRLLELAL 145
>gi|294994224|ref|ZP_06799915.1| hypothetical protein Mtub2_06848 [Mycobacterium tuberculosis
210]
Length=89
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 77 RYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARL 136
RYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARL
Sbjct 1 RYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARL 60
Query 137 RSPLLAVVKDGSLLGVVTASRLLAAALKT 165
RSPLLAVVKDGSLLGVVTASRLLAAALKT
Sbjct 61 RSPLLAVVKDGSLLGVVTASRLLAAALKT 89
>gi|300788418|ref|YP_003768709.1| hypothetical protein AMED_6580 [Amycolatopsis mediterranei U32]
gi|299797932|gb|ADJ48307.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=148
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/146 (61%), Positives = 112/146 (77%), Gaps = 0/146 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M A +MAE+ PVV +DS+ALDA RMLA RLPG++VT AG ++LPAS VVR +VP Y
Sbjct 1 MHAVEMAEECPVVELDSNALDAVRMLAARRLPGIVVTDRAGCPQSILPASHVVRLLVPSY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V+DDP AGVL+ES ADR A++L GK VR +LP+ E+P ADDTI+EVAA+MARLR
Sbjct 61 VRDDPSPAGVLDESMADRVADKLGGKTVRTLLPEKPSELPRVQADDTIVEVAAIMARLRC 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAALK 164
PL+AV++D LLGV++ASRLL AL
Sbjct 121 PLVAVMEDKRLLGVISASRLLELALS 146
>gi|340530020|gb|AEK45225.1| hypothetical protein RAM_33760 [Amycolatopsis mediterranei S699]
Length=145
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/141 (62%), Positives = 110/141 (79%), Gaps = 0/141 (0%)
Query 23 QMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQDD 82
+MAE+ PVV +DS+ALDA RMLA RLPG++VT AG ++LPAS VVR +VP YV+DD
Sbjct 2 EMAEECPVVELDSNALDAVRMLAARRLPGIVVTDRAGCPQSILPASHVVRLLVPSYVRDD 61
Query 83 PLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLA 142
P AGVL+ES ADR A++L GK VR +LP+ E+P ADDTI+EVAA+MARLR PL+A
Sbjct 62 PSPAGVLDESMADRVADKLGGKTVRTLLPEKPSELPRVQADDTIVEVAAIMARLRCPLVA 121
Query 143 VVKDGSLLGVVTASRLLAAAL 163
V++D LLGV++ASRLL AL
Sbjct 122 VMEDKRLLGVISASRLLELAL 142
>gi|284028455|ref|YP_003378386.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283807748|gb|ADB29587.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length=148
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/141 (59%), Positives = 106/141 (76%), Gaps = 0/141 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M EQMAE +PVV +DSDA +A +LA RLPGL+V G ++VLPASQVVRF+VP Y
Sbjct 1 MHGEQMAEQFPVVGLDSDAREAVELLASRRLPGLIVVDEKGSPHSVLPASQVVRFLVPSY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
VQDDP LA V++ES AD+ A++L+G VR +LP E+P DDT++EVAA+MARLR
Sbjct 61 VQDDPSLARVIDESLADQVADKLAGVTVRKLLPSQPAELPVVKHDDTVLEVAAIMARLRC 120
Query 139 PLLAVVKDGSLLGVVTASRLL 159
PL+AVVK+ ++G +TASRLL
Sbjct 121 PLVAVVKNKEIIGAITASRLL 141
>gi|302527271|ref|ZP_07279613.1| CBS domain-containing protein [Streptomyces sp. AA4]
gi|302436166|gb|EFL07982.1| CBS domain-containing protein [Streptomyces sp. AA4]
Length=148
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/145 (65%), Positives = 119/145 (83%), Gaps = 0/145 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA +AE++PVV +D+DAL AAR+LAEHRLPGL+VT +G + VLPAS VV+F+VP Y
Sbjct 1 MRAADLAEEFPVVDLDADALAAARLLAEHRLPGLVVTEASGCPHTVLPASDVVQFLVPPY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V+DDP LAGVL+ES ADR A++L G+ VR++LPD E+P +ADDTI+EVAA MARLR
Sbjct 61 VRDDPSLAGVLSESMADRVADKLGGRTVRELLPDEPRELPRVDADDTIVEVAATMARLRC 120
Query 139 PLLAVVKDGSLLGVVTASRLLAAAL 163
PL+AV++D +LLGVV+ASRLL AL
Sbjct 121 PLVAVMRDRTLLGVVSASRLLEHAL 145
>gi|345008134|ref|YP_004810488.1| sodium/hydrogen exchanger [Streptomyces violaceusniger Tu 4113]
gi|344034483|gb|AEM80208.1| sodium/hydrogen exchanger [Streptomyces violaceusniger Tu 4113]
Length=580
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/145 (54%), Positives = 102/145 (71%), Gaps = 4/145 (2%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA +A Y V +D DAL+AAR++AEH+LPGLLV G+ A+LPASQV++ +VP Y
Sbjct 425 MRARDLAMAYESVRVDDDALEAARLMAEHQLPGLLVLDRDGEPKAILPASQVIKALVPAY 484
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V +DP LA V++E ADR E L G++V D+L D P A+ DDT +EVAA+MA+ RS
Sbjct 485 VIEDPALAAVIDEKHADRLCEALRGRRVGDLLSDKATRPPIADPDDTALEVAALMAQARS 544
Query 139 PLLAVV---KDG-SLLGVVTASRLL 159
PL+AV K G LLGV+TAS+LL
Sbjct 545 PLVAVARRDKAGLHLLGVITASQLL 569
>gi|291298032|ref|YP_003509310.1| CBS domain-containing protein [Stackebrandtia nassauensis DSM
44728]
gi|290567252|gb|ADD40217.1| CBS domain containing protein [Stackebrandtia nassauensis DSM
44728]
Length=159
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/147 (47%), Positives = 100/147 (69%), Gaps = 0/147 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M A +A+D+P V++D+ AL+AA+++A + LPGL+V G Y VL +QV+R VP Y
Sbjct 13 MHAGALAKDFPTVTLDTSALEAAKLMAGNDLPGLIVLGSNGCPYTVLGGTQVLRMSVPLY 72
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
+QDDP LAGV++E+ AD L K VR++LP+ ++P A T++EVAA+MAR+R
Sbjct 73 IQDDPTLAGVVDEAAADTFVAGLGNKTVRELLPEEPFDLPVVGARATLLEVAALMARVRI 132
Query 139 PLLAVVKDGSLLGVVTASRLLAAALKT 165
P++AVV + +LLG +T LL AL T
Sbjct 133 PVVAVVDNDTLLGAITVDSLLDHALGT 159
>gi|296268014|ref|YP_003650646.1| CBS domain-containing protein [Thermobispora bispora DSM 43833]
gi|296090801|gb|ADG86753.1| CBS domain containing protein [Thermobispora bispora DSM 43833]
Length=147
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/141 (48%), Positives = 95/141 (68%), Gaps = 0/141 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA + P VS+DS +DAA ++ E +LPGL+V G Y++L +QV+R +P+Y
Sbjct 1 MRARDLMVPSPAVSLDSPVIDAANLMIESKLPGLIVLDERGTPYSILSGTQVLRLAIPQY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
Q+DP LA V++E+ ADR AE LS + VR VLPD E+P A+ D T++E+AA+MAR R
Sbjct 61 CQEDPALARVIDEAHADRFAEALSRRTVRQVLPDRPSELPIADPDATLLELAALMARTRC 120
Query 139 PLLAVVKDGSLLGVVTASRLL 159
PL+A+V+ G LLG V L+
Sbjct 121 PLVAIVEKGRLLGAVALHPLM 141
>gi|269125949|ref|YP_003299319.1| CBS domain containing protein [Thermomonospora curvata DSM 43183]
gi|268310907|gb|ACY97281.1| CBS domain containing protein [Thermomonospora curvata DSM 43183]
Length=153
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (62%), Gaps = 5/150 (3%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M A ++A YP + DS+AL AR++ E RLPGL+V A+LP SQ++ F +P Y
Sbjct 1 MLARELARPYPHIDPDSEALSVARLVIEQRLPGLIVLDDLQHPLAILPTSQILWFAIPPY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V++DP LA V +E ADR ER+ G+ +RD+LP P D ++EVA +MA+ S
Sbjct 61 VREDPALARVYSERQADRMCERMRGRSLRDLLPPEPRRPPMVTGDANVLEVATLMAQAHS 120
Query 139 PLLAVV--KDG---SLLGVVTASRLLAAAL 163
PL+AVV K+G ++GV++ + LL L
Sbjct 121 PLVAVVESKNGPRPPMIGVISVADLLGRLL 150
>gi|336120134|ref|YP_004574912.1| hypothetical protein MLP_44950 [Microlunatus phosphovorus NM-1]
gi|334687924|dbj|BAK37509.1| hypothetical protein MLP_44950 [Microlunatus phosphovorus NM-1]
Length=152
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/142 (43%), Positives = 85/142 (60%), Gaps = 1/142 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M+A +A + P V++D A +++A+ +LPGL+V A AVLP SQV+R IV +
Sbjct 1 MQASDIAVEVPTVTLDDPVTRAVKIMADRQLPGLIVVDRASHPRAVLPGSQVLRMIVAQT 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
Q DP LA ++E+ AD + L + V D LP + AD T++EVA VMAR+ S
Sbjct 61 YQRDPALARTIDEAHADLFWQELEHRTVSDCLPPQPSKKVAVQADATLLEVAGVMARMHS 120
Query 139 PLLAVVK-DGSLLGVVTASRLL 159
PL+AVV DG L G +T S LL
Sbjct 121 PLVAVVAPDGRLSGCITLSALL 142
>gi|302543782|ref|ZP_07296124.1| CBS domain protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461400|gb|EFL24493.1| CBS domain protein [Streptomyces himastatinicus ATCC 53653]
Length=137
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 85/120 (71%), Gaps = 0/120 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M A +A +Y VS+D DAL AAR+LAE +LPGLLV G G+ A+LPASQVV+ +VP Y
Sbjct 1 MCARDLAVEYESVSVDDDALAAARLLAERQLPGLLVLDGDGEPKAILPASQVVKALVPGY 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
V +DP LA V++E+ ADR E L G++V D+L D P A DDT +EVAA+MAR+RS
Sbjct 61 VVEDPALAAVVDENHADRLCEALRGRRVGDLLSDEAARPPIAAPDDTALEVAALMARVRS 120
>gi|269128359|ref|YP_003301729.1| CBS domain containing protein [Thermomonospora curvata DSM 43183]
gi|268313317|gb|ACY99691.1| CBS domain containing protein [Thermomonospora curvata DSM 43183]
Length=152
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/144 (38%), Positives = 79/144 (55%), Gaps = 1/144 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
MRA +A P V++ R++A RLPGL+V + V+P +Q++R +VPR
Sbjct 1 MRARDIAIQVPTVAVGDSVTRTVRVMALGRLPGLIVVDERRRPRMVVPGTQILRMLVPRS 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
Q+DP LA ++E AD L + D L D D T++E AA+MAR R+
Sbjct 61 YQEDPALARTVDEPHADLFWRELGELTIGDFLHDQDFRPVTVREDATLLEAAALMARRRT 120
Query 139 PLLAVV-KDGSLLGVVTASRLLAA 161
PL+ VV +DG++ G VT RLL +
Sbjct 121 PLVVVVDRDGTMTGAVTLDRLLGS 144
>gi|118467949|ref|YP_885255.1| CBS domain-containing protein [Mycobacterium smegmatis str. MC2
155]
gi|118169236|gb|ABK70132.1| CBS domain protein [Mycobacterium smegmatis str. MC2 155]
Length=152
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/144 (38%), Positives = 79/144 (55%), Gaps = 1/144 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M+A ++A P V ID A +++ +RLPGL+V + AVLP +QV++ +P
Sbjct 1 MQAHEIAVHPPTVRIDDPVSKAVQLMVVNRLPGLVVVDDLDRPVAVLPGTQVLKLAIPES 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
+DDP L ++E AD V D LP+ + D T++E+A +MA RS
Sbjct 61 YRDDPALVRTVDEIHADLFWHGPGKLTVGDCLPNPVATPATVAPDATLLEIATIMANKRS 120
Query 139 PLLAVV-KDGSLLGVVTASRLLAA 161
PL+AVV +DG L G VT RLL +
Sbjct 121 PLIAVVDRDGKLTGAVTLERLLTS 144
>gi|108797568|ref|YP_637765.1| signal transduction protein [Mycobacterium sp. MCS]
gi|108767987|gb|ABG06709.1| putative signal transduction protein with CBS domains [Mycobacterium
sp. MCS]
Length=234
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/144 (39%), Positives = 77/144 (54%), Gaps = 1/144 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M+A ++A P V +D A +++ +RLPGL+V A AVLP +QV+R +P
Sbjct 83 MQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVDDADHPIAVLPGTQVLRLTIPET 142
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
+DDP L ++E AD V D LP + + D T++EVA VMA RS
Sbjct 143 YRDDPALVRTVDEIHADLFWHGPGRLTVGDCLPSPVAKPATVAPDATLLEVATVMATKRS 202
Query 139 PLLAVVKD-GSLLGVVTASRLLAA 161
PL+A+V G L G VT RLL +
Sbjct 203 PLIAIVDGAGRLTGAVTLERLLTS 226
>gi|119866654|ref|YP_936606.1| signal transduction protein [Mycobacterium sp. KMS]
gi|126433190|ref|YP_001068881.1| signal transduction protein [Mycobacterium sp. JLS]
gi|119692743|gb|ABL89816.1| putative signal transduction protein with CBS domains [Mycobacterium
sp. KMS]
gi|126232990|gb|ABN96390.1| putative signal transduction protein with CBS domains [Mycobacterium
sp. JLS]
Length=152
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/144 (39%), Positives = 77/144 (54%), Gaps = 1/144 (0%)
Query 19 MRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRY 78
M+A ++A P V +D A +++ +RLPGL+V A AVLP +QV+R +P
Sbjct 1 MQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVDDADHPIAVLPGTQVLRLTIPET 60
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
+DDP L ++E AD V D LP + + D T++EVA VMA RS
Sbjct 61 YRDDPALVRTVDEIHADLFWHGPGRLTVGDCLPSPVAKPATVAPDATLLEVATVMATKRS 120
Query 139 PLLAVVKD-GSLLGVVTASRLLAA 161
PL+A+V G L G VT RLL +
Sbjct 121 PLIAIVDGAGRLTGAVTLERLLTS 144
>gi|297195954|ref|ZP_06913352.1| CBS domain-containing protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297153006|gb|EDY62756.2| CBS domain-containing protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=108
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/68 (53%), Positives = 49/68 (73%), Gaps = 0/68 (0%)
Query 24 MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQDDP 83
+AE YP V+ D A+DAAR+LAE LP LLV G YA++P SQ+VR ++P Y+ +DP
Sbjct 32 LAETYPFVTTDDSAMDAARLLAERALPALLVLDADGHPYAIVPGSQLVRQLLPHYIVEDP 91
Query 84 LLAGVLNE 91
LLA V++E
Sbjct 92 LLAAVVDE 99
>gi|188584946|ref|YP_001916491.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length=147
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (29%), Positives = 74/153 (49%), Gaps = 14/153 (9%)
Query 19 MRAEQ-MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVV----RF 73
MRA+ M+ D VS +S +AA+++A+ + G+ V ++ ++ R
Sbjct 1 MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRI 60
Query 74 IVPRYVQDDPLLAGVLNESTADRCAERLS---GKKVRDVLPDHLVEVPPANADDTIIEVA 130
P Y++ L G++ + D E+L +V+D++ D +V V P I E+A
Sbjct 61 SPPGYIE---FLGGIVFTESQDEFFEQLRKYVATQVKDLMSDQVVTVGPEAG---IEEIA 114
Query 131 AVMARLRSPLLAVVKDGSLLGVVTASRLLAAAL 163
M + L VV +G LLG+V+ + LL A L
Sbjct 115 TTMDQKNVKRLPVVGEGKLLGIVSRADLLKALL 147
>gi|328952455|ref|YP_004369789.1| hypothetical protein [Desulfobacca acetoxidans DSM 11109]
gi|328452779|gb|AEB08608.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length=151
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query 24 MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVV----RFIVPRYV 79
M + V+ + LD AR+LA+H++ G V G+ V+ + ++ +F +P V
Sbjct 8 MTKTVITVTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLIDRAKKFQLPHVV 67
Query 80 QDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSP 139
+ ST + E++ G +V DV+ + + P + D EVA +MA +
Sbjct 68 TILDAHFYLERPSTFRKNLEKMLGNQVADVMTAPAITITPELSVD---EVATIMAHRNAH 124
Query 140 LLAVVKDGSLLGVV 153
L V++DG+L+GV+
Sbjct 125 TLPVLQDGNLVGVI 138
>gi|115523746|ref|YP_780657.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
gi|115517693|gb|ABJ05677.1| putative signal-transduction protein with CBS domains [Rhodopseudomonas
palustris BisA53]
Length=242
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 71/151 (48%), Gaps = 17/151 (11%)
Query 19 MRAEQ-MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIV-- 75
MRA Q M D V ++ +DAA ++ + + GL V AG+ V+ +R
Sbjct 1 MRAHQIMTHDVVTVGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIRRTEIG 60
Query 76 -----PRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVA 130
R+++ LL G +S +D E G+KV +++ H V AD T+ E+
Sbjct 61 TERKRGRWLR---LLLGP-GQSASDFVHEH--GRKVSEIMTSHPHTV---QADATVSEIV 111
Query 131 AVMARLRSPLLAVVKDGSLLGVVTASRLLAA 161
M + L V++DG ++G+VT LL A
Sbjct 112 KTMEKYHVKRLPVLQDGRMVGIVTRKNLLKA 142
>gi|313672485|ref|YP_004050596.1| cbs domain containing protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939241|gb|ADR18433.1| CBS domain containing protein [Calditerrivibrio nitroreducens
DSM 19672]
Length=165
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (29%), Positives = 55/105 (53%), Gaps = 6/105 (5%)
Query 49 LPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRD 108
+ G+LV G K L V+R ++P Y+ +PLL+ E A R+ KKV++
Sbjct 40 VKGMLVMNGD-KVVGTLSMEDVLRSVIPFYI--NPLLSDFTWEGMLLNMASRMCNKKVKE 96
Query 109 VLPDHLVEVPPANADDTIIEVAAVMARLRSPLLAVVKDGSLLGVV 153
++ +L+ A DD+++E A + + L VV+ G ++G++
Sbjct 97 IMNKNLI---FAEQDDSLMECAEKLIKYNLQRLPVVEKGKVVGII 138
>gi|90425526|ref|YP_533896.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90107540|gb|ABD89577.1| putative signal-transduction protein with CBS domains [Rhodopseudomonas
palustris BisB18]
Length=242
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 71/151 (48%), Gaps = 17/151 (11%)
Query 19 MRAEQ-MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIV-- 75
MRA Q M VS D+ +DAA ++ + GL V AG+ ++ +R
Sbjct 1 MRAHQIMTRQVVTVSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRAEIG 60
Query 76 -----PRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVA 130
R+++ LL G +S +D E G+KV +++ H V NA+ T+ E+
Sbjct 61 TERKRGRWLR---LLLG-PGQSASDFVHEH--GRKVGEIMTTHPHTV---NAEATVAEIV 111
Query 131 AVMARLRSPLLAVVKDGSLLGVVTASRLLAA 161
M + L V++DG ++G+VT LL A
Sbjct 112 KAMEKHHVKRLPVMQDGRMVGIVTRKNLLQA 142
>gi|91200743|emb|CAJ73795.1| hypothetical protein kuste3040 [Candidatus Kuenenia stuttgartiensis]
Length=151
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (27%), Positives = 66/141 (47%), Gaps = 11/141 (7%)
Query 24 MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQDDP 83
M D VV + ML + R + V K V+ + +++ ++P+Y+ D
Sbjct 7 MVTDPTVVPASGTFYNLMEMLGKIRFHVIFVVDDKEKLVGVVTETDLLKVLMPKYLNSDD 66
Query 84 LLAGVLNESTAD-RCAERLSGKKVRDVLPDHLVEVP----PANADDTIIEVAAVMARLRS 138
L ++ E D RC E +D+ ++ P A+ +DTII+VAA M +
Sbjct 67 ALFSIMGEDYFDKRCLE------CKDMDITEIMSKPILAATASENDTIIKVAAAMLNRKI 120
Query 139 PLLAVVKDGSLLGVVTASRLL 159
+ V++DG ++G+V+ LL
Sbjct 121 HAVPVLRDGKVVGIVSRLVLL 141
>gi|108803862|ref|YP_643799.1| CBS domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108765105|gb|ABG03987.1| CBS domain containing membrane protein [Rubrobacter xylanophilus
DSM 9941]
Length=159
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/152 (29%), Positives = 72/152 (48%), Gaps = 8/152 (5%)
Query 13 ATYRRDMRAEQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVR 72
+ R D+ + VS D+ A +A R+L EHR+PGL V G G+ + ++
Sbjct 6 GSGREDLSLRDLVRPSASVSPDAPAREALRLLLEHRVPGLPVVDGEGRPVGFVSDGNLLA 65
Query 73 FIVPRYVQDDPLLAGVLNESTADRCAERL---SGKKVRDVLPDHLVEVPPANADDTIIEV 129
+PRY+ L+ V T D L + + VR+V+ + + V +AD + +E
Sbjct 66 SALPRYLTMMEDLSFV--RETGDEWVHYLAEAADRPVREVMSEKVATV---DADTSELEA 120
Query 130 AAVMARLRSPLLAVVKDGSLLGVVTASRLLAA 161
A M + V ++G ++GVV+ L AA
Sbjct 121 AREMVVEGVSSVVVTENGRMIGVVSRLDLYAA 152
>gi|289523028|ref|ZP_06439882.1| putative CBS domain pair [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503571|gb|EFD24735.1| putative CBS domain pair [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length=155
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (24%), Positives = 66/138 (48%), Gaps = 7/138 (5%)
Query 22 EQMAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQ- 80
E M +D V+S D +DA +M H++ G+ V G + S +++ +P Y++
Sbjct 7 EVMQKDLTVLSKDDLVIDAVKMFYIHKVTGVPVIEGNWYLVGFISESDILKAALPTYLET 66
Query 81 --DDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
L+ S D+ + + ++V + + ++ V P+ +++ +A +M R R
Sbjct 67 ITSSTFLSNNGELSLFDKIHD-IGLRRVEEFMTREVISVDPSA---SLMSIADMMIRKRI 122
Query 139 PLLAVVKDGSLLGVVTAS 156
L V KDG +G++ S
Sbjct 123 KRLPVAKDGKYIGIIDRS 140
>gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928309|gb|AEB68111.1| CBS domain protein [Methanosaeta concilii GP6]
Length=160
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/136 (29%), Positives = 67/136 (50%), Gaps = 18/136 (13%)
Query 39 DAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIV-------------PRYVQDDPLL 85
+AAR+L E+++ G+ V G + ++ S ++R + P + + P
Sbjct 22 EAARLLKENKISGMPVLDGE-RLVGIVSESDLLRLLSVEDESEGSLWLPSPFEIFEVPFR 80
Query 86 AGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLAVVK 145
V E E + K+V DV+ +L E+ P DD+I E A++M R R L VV+
Sbjct 81 DLVKWERMRSSLKE-IPEKEVADVMSRNLHEIGP---DDSIEEAASIMTRHRINRLPVVE 136
Query 146 DGSLLGVVTASRLLAA 161
DG L+G+VT +++
Sbjct 137 DGRLVGIVTRGDIISG 152
>gi|78357089|ref|YP_388538.1| hypothetical protein Dde_2046 [Desulfovibrio alaskensis G20]
gi|78219494|gb|ABB38843.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length=150
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/143 (31%), Positives = 69/143 (49%), Gaps = 13/143 (9%)
Query 24 MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVV----RFIVPRYV 79
M+ D V+ D D ++A +++ E++ GL V AGK VL S +V + +P
Sbjct 8 MSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVAQQKKVNLPSLF 67
Query 80 QDDPLLAGVL---NESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARL 136
+L G + + S D +++ +V D + D+ V P D + EVA +M
Sbjct 68 T---ILDGFIPLKSLSDMDSEMRKVAATRVSDAMTDNPATVTP---DTPLDEVATLMVDS 121
Query 137 RSPLLAVVKDGSLLGVVTASRLL 159
+ L VVKDG L+GVV +L
Sbjct 122 KYYTLPVVKDGILVGVVGKEDVL 144
>gi|13542143|ref|NP_111831.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
Length=176
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/102 (28%), Positives = 47/102 (47%), Gaps = 22/102 (21%)
Query 19 MRAEQ-MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPR 77
MR E+ M +Y V+ +S DA +++ E+RL GL+V GK ++ +++ +PR
Sbjct 1 MRVEKIMNTNYRSVNENSSVFDAVKIMNENRLYGLIVKDNEGKDVGLISERSIIKRFIPR 60
Query 78 ----------YVQDDPL-----------LAGVLNESTADRCA 98
YV P+ A L+E+ +RCA
Sbjct 61 NKKPDEVQIKYVMRKPIPKVPSSYDVRDAAAYLSENGLERCA 102
>gi|296132180|ref|YP_003639427.1| CBS domain containing membrane protein [Thermincola sp. JR]
gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
Length=150
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/133 (29%), Positives = 67/133 (51%), Gaps = 13/133 (9%)
Query 39 DAARMLAEHRLPGLLVTAGAGKQYAVLPAS----QVVRFIVPRYVQDDPLLAGVLNESTA 94
+ A++LA+ ++ G+ V AGK ++ + Q + VP YVQ LL G++ +
Sbjct 22 EVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLKVPSYVQ---LLGGIIYLDSV 78
Query 95 DRCAERLSGK---KVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLAVVKDGSLLG 151
E L +V+D++ +V V D I ++A MA L VV+DG+L+G
Sbjct 79 KEFEEDLRKAVAVQVKDIMTTDVVTV---EEDAEIEDIATTMADEGINRLPVVRDGALVG 135
Query 152 VVTASRLLAAALK 164
+V+ + ++ A K
Sbjct 136 IVSRADIVKALAK 148
>gi|85710518|ref|ZP_01041582.1| glycerol-3-phosphate dehydrogenase [Erythrobacter sp. NAP1]
gi|85687696|gb|EAQ27701.1| glycerol-3-phosphate dehydrogenase [Erythrobacter sp. NAP1]
Length=493
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/105 (35%), Positives = 52/105 (50%), Gaps = 3/105 (2%)
Query 9 APTFATYRRDMRAEQMAEDYP-VVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPA 67
A + +T RD + E + ED P ++SI L R LAEH L + + G+ AVLP
Sbjct 326 AASNSTVTRDYQFE-LEEDGPKLLSIFGGKLTTYRKLAEHALERIGIDGGSWTADAVLPG 384
Query 68 SQVVRFIVPRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPD 112
++ R+V D L L+E T R A R G ++ D+L D
Sbjct 385 GEIDPIYFDRFVGDQAALFPWLDEKTVLRLA-RAYGTRMIDLLGD 428
>gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039 [Hyphomicrobium sp. MC1]
gi|337761415|emb|CCB67248.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length=242
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/137 (31%), Positives = 69/137 (51%), Gaps = 14/137 (10%)
Query 30 VVSIDSDAL--DAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFI-----VPRYVQDD 82
V+SI DA + + + +HR+ GL V + GK V+ +R V R D
Sbjct 11 VISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLRRAETGTEVKRSFWRD 70
Query 83 PLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLA 142
+L G +E+ A+ R G+KV +V+ + V P D + EV VM + R +
Sbjct 71 -MLTG--SETLANEYI-RTHGRKVSEVMTRDPISVSP---DTELSEVIHVMEKNRIKRVP 123
Query 143 VVKDGSLLGVVTASRLL 159
VVKDG+++G+++ + LL
Sbjct 124 VVKDGAVVGILSRANLL 140
>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains [Methanocaldococcus
vulcanius M7]
gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains [Methanocaldococcus
vulcanius M7]
Length=194
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/137 (25%), Positives = 63/137 (46%), Gaps = 26/137 (18%)
Query 28 YPVVSIDSD--ALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIVPRYVQDDPLL 85
+PV++ D D A ++ EH + G +V K +L +V+ +V + ++ +L
Sbjct 15 FPVITAKKDMSVYDIANIMTEHNI-GAVVIVEDNKPVGILTERDIVKRVVSKNLKPKEVL 73
Query 86 AGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLAVVK 145
A E + KK+ + + + +I E A +MA+ L VVK
Sbjct 74 A------------EEVMSKKIITI-----------HQNASITEAAKIMAKYGVKRLPVVK 110
Query 146 DGSLLGVVTASRLLAAA 162
DG+L+G++T S ++ +
Sbjct 111 DGNLMGIITQSDIIKIS 127
>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
AK-01]
gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum alkenivorans
AK-01]
Length=149
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/133 (31%), Positives = 65/133 (49%), Gaps = 13/133 (9%)
Query 34 DSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVV----RFIVPRYVQDDPLLAGVL 89
D+D +AA+ L E+R+ G V GK +L S ++ RF VP + LL V+
Sbjct 18 DTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLIVQQKRFPVPSFFT---LLDSVI 74
Query 90 ---NESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRSPLLAVVKD 146
++ ++ E+++ KV + + V V P D + +VAA+M + L VV
Sbjct 75 PLVSQKHFEKEMEKMAAFKVSQAMTEKPVVVSP---DTPLEDVAALMVDKKLHTLPVVDS 131
Query 147 GSLLGVVTASRLL 159
G L+GVV +L
Sbjct 132 GKLVGVVGKEDIL 144
>gi|86748490|ref|YP_484986.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
gi|86571518|gb|ABD06075.1| putative signal-transduction protein with CBS domains [Rhodopseudomonas
palustris HaA2]
Length=243
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/152 (29%), Positives = 68/152 (45%), Gaps = 19/152 (12%)
Query 19 MRAEQ-MAEDYPVVSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIV-- 75
MRA Q M + + ++ +DAA + EH + GL V G G+ ++ +R
Sbjct 1 MRANQIMTANLVTIGPEASIVDAANAMLEHHVSGLPVVDGGGRLIGIISEGDFIRRAELG 60
Query 76 -----PRYVQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIE-V 129
R+++ LL G AD E G+KV +V+ H P ++DT IE +
Sbjct 61 TQRKRSRWLR---LLLGP-GTCAADFVHEH--GRKVGEVMTHH----PHTISEDTSIEAI 110
Query 130 AAVMARLRSPLLAVVKDGSLLGVVTASRLLAA 161
M + L V++ L+G+VT LL A
Sbjct 111 VRTMEKHHVKRLPVMRGDQLVGIVTRKNLLRA 142
>gi|333911316|ref|YP_004485049.1| putative signal transduction protein with CBS domains [Methanotorris
igneus Kol 5]
gi|333751905|gb|AEF96984.1| putative signal transduction protein with CBS domains [Methanotorris
igneus Kol 5]
Length=153
Score = 41.2 bits (95), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/143 (28%), Positives = 65/143 (46%), Gaps = 17/143 (11%)
Query 31 VSIDSDALDAARMLAEHRLPGLLVTAGAGKQYAVLPASQVVRFIV------------PRY 78
V+ D D D R+ EH++ G V GK ++ S +V+ I P
Sbjct 14 VNPDDDIRDVIRLFREHKISGAPVVED-GKLVGIISESDIVKTITTHNESIGLILPSPLD 72
Query 79 VQDDPLLAGVLNESTADRCAERLSGKKVRDVLPDHLVEVPPANADDTIIEVAAVMARLRS 138
+ + PL + E + + L K V+DV+ ++ + P D+TI + A +M
Sbjct 73 LIELPLKTTLKIEEFKEDIKKALKTK-VKDVMTKDVITISP---DETINDAAKLMIENNI 128
Query 139 PLLAVVKDGSLLGVVTASRLLAA 161
L VV++G L+G+VT L+ A
Sbjct 129 KRLPVVENGKLVGIVTRGDLIEA 151
Lambda K H
0.319 0.134 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128736477480
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40