BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2693c
Length=223
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609830|ref|NP_217209.1| integral membrane alanine and leuci... 429 1e-118
gi|289746494|ref|ZP_06505872.1| integral membrane alanine and le... 426 1e-117
gi|167970084|ref|ZP_02552361.1| conserved alanine and leucine ri... 396 1e-108
gi|183982035|ref|YP_001850326.1| integral membrane alanine and l... 283 1e-74
gi|240169705|ref|ZP_04748364.1| integral membrane alanine and le... 283 1e-74
gi|118618656|ref|YP_906988.1| integral membrane alanine and leuc... 282 2e-74
gi|120403461|ref|YP_953290.1| hypothetical protein Mvan_2471 [My... 275 4e-72
gi|336458811|gb|EGO37768.1| Protein of unknown function (DUF3159... 269 3e-70
gi|118464117|ref|YP_882761.1| hypothetical protein MAV_3584 [Myc... 268 5e-70
gi|41408908|ref|NP_961744.1| hypothetical protein MAP2810c [Myco... 266 2e-69
gi|108799162|ref|YP_639359.1| hypothetical protein Mmcs_2195 [My... 256 1e-66
gi|296171882|ref|ZP_06852962.1| integral membrane alanine and le... 256 2e-66
gi|342858440|ref|ZP_08715095.1| hypothetical protein MCOL_06181 ... 254 8e-66
gi|315444841|ref|YP_004077720.1| hypothetical protein Mspyr1_327... 252 2e-65
gi|145224510|ref|YP_001135188.1| hypothetical protein Mflv_3929 ... 250 1e-64
gi|333991075|ref|YP_004523689.1| integral membrane alanine and l... 249 2e-64
gi|254821708|ref|ZP_05226709.1| hypothetical protein MintA_17362... 240 1e-61
gi|118473532|ref|YP_887100.1| integral membrane alanine and leuc... 234 6e-60
gi|312139444|ref|YP_004006780.1| integral membrane protein [Rhod... 211 6e-53
gi|325672668|ref|ZP_08152364.1| integral membrane alanine and le... 210 1e-52
gi|226366227|ref|YP_002784010.1| hypothetical protein ROP_68180 ... 203 1e-50
gi|169630079|ref|YP_001703728.1| hypothetical protein MAB_2996c ... 200 1e-49
gi|111023791|ref|YP_706763.1| hypothetical protein RHA1_ro06833 ... 200 2e-49
gi|226306313|ref|YP_002766273.1| hypothetical protein RER_28260 ... 196 3e-48
gi|229491273|ref|ZP_04385099.1| conserved hypothetical protein [... 194 8e-48
gi|333919441|ref|YP_004493022.1| hypothetical protein AS9A_1773 ... 192 4e-47
gi|291006909|ref|ZP_06564882.1| integral membrane alanine and le... 186 2e-45
gi|134098389|ref|YP_001104050.1| integral membrane alanine and l... 186 2e-45
gi|227542246|ref|ZP_03972295.1| alanine/leucine rich integral me... 185 5e-45
gi|227503488|ref|ZP_03933537.1| integral membrane alanine and le... 181 5e-44
gi|334697032|gb|AEG81829.1| putative membrane protein [Corynebac... 181 9e-44
gi|305680885|ref|ZP_07403692.1| conserved hypothetical protein [... 179 3e-43
gi|68536157|ref|YP_250862.1| hypothetical protein jk1080 [Coryne... 179 3e-43
gi|262202188|ref|YP_003273396.1| hypothetical protein Gbro_2255 ... 179 3e-43
gi|337290919|ref|YP_004629940.1| hypothetical protein CULC22_013... 178 4e-43
gi|225021273|ref|ZP_03710465.1| hypothetical protein CORMATOL_01... 178 6e-43
gi|300784517|ref|YP_003764808.1| integral membrane alanine and l... 178 6e-43
gi|227488757|ref|ZP_03919073.1| integral membrane alanine and le... 177 8e-43
gi|260578854|ref|ZP_05846760.1| membrane protein [Corynebacteriu... 177 1e-42
gi|227504957|ref|ZP_03935006.1| integral membrane alanine and le... 176 2e-42
gi|306836264|ref|ZP_07469246.1| conserved hypothetical protein [... 175 5e-42
gi|227833270|ref|YP_002834977.1| hypothetical protein cauri_1446... 173 1e-41
gi|300858619|ref|YP_003783602.1| hypothetical protein cpfrc_0120... 173 1e-41
gi|120403117|ref|YP_952946.1| putative integral membrane alanine... 171 9e-41
gi|302525753|ref|ZP_07278095.1| integral membrane alanine and le... 170 2e-40
gi|108802187|ref|YP_642384.1| hypothetical protein Mmcs_5226 [My... 170 2e-40
gi|336325724|ref|YP_004605690.1| hypothetical protein CRES_1171 ... 169 2e-40
gi|257056413|ref|YP_003134245.1| hypothetical protein Svir_24230... 169 2e-40
gi|296117765|ref|ZP_06836349.1| putative membrane protein [Coryn... 168 5e-40
gi|333025565|ref|ZP_08453629.1| putative integral membrane alani... 167 7e-40
>gi|15609830|ref|NP_217209.1| integral membrane alanine and leucine rich protein [Mycobacterium
tuberculosis H37Rv]
gi|15842231|ref|NP_337268.1| hypothetical protein MT2767 [Mycobacterium tuberculosis CDC1551]
gi|31793865|ref|NP_856358.1| integral membrane alanine and leucine rich protein [Mycobacterium
bovis AF2122/97]
69 more sequence titles
Length=223
Score = 429 bits (1104), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL
Sbjct 1 MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL
Sbjct 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW
Sbjct 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE
Sbjct 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
>gi|289746494|ref|ZP_06505872.1| integral membrane alanine and leucine rich protein [Mycobacterium
tuberculosis 02_1987]
gi|289758821|ref|ZP_06518199.1| integral membrane alanine and leucine rich protein [Mycobacterium
tuberculosis T85]
gi|294994214|ref|ZP_06799905.1| hypothetical protein Mtub2_06798 [Mycobacterium tuberculosis
210]
7 more sequence titles
Length=223
Score = 426 bits (1096), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 221/223 (99%), Positives = 222/223 (99%), Gaps = 0/223 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL
Sbjct 1 MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL
Sbjct 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSWLS RDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW
Sbjct 121 WSWLSRRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE
Sbjct 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
>gi|167970084|ref|ZP_02552361.1| conserved alanine and leucine rich integral membrane protein
[Mycobacterium tuberculosis H37Ra]
Length=206
Score = 396 bits (1017), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 205/206 (99%), Positives = 206/206 (100%), Gaps = 0/206 (0%)
Query 18 VSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAV 77
+SGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAV
Sbjct 1 MSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAV 60
Query 78 CALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRA 137
CALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRA
Sbjct 61 CALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRA 120
Query 138 VFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAA 197
VFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAA
Sbjct 121 VFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAA 180
Query 198 QRAILASHDAAAVGGAAEFDADAGRE 223
QRAILASHDAAAVGGAAEFDADAGRE
Sbjct 181 QRAILASHDAAAVGGAAEFDADAGRE 206
>gi|183982035|ref|YP_001850326.1| integral membrane alanine and leucine rich protein [Mycobacterium
marinum M]
gi|183175361|gb|ACC40471.1| conserved integral membrane alanine and leucine rich protein
[Mycobacterium marinum M]
Length=223
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/223 (77%), Positives = 193/223 (87%), Gaps = 1/223 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
++ANR SA+ LLAQAGGVSGLVYSS+PVV FV SS GLLPAIG AL+ AGL+LL RL+
Sbjct 1 MSANRVSAESLLAQAGGVSGLVYSSVPVVIFVAVSSIGGLLPAIGSALAAAGLVLLLRLI 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRES +P V+GF GVA CAL+AYLVGQSKGYFLLGIWMSLLWAVVF LSI++RRP+VG+L
Sbjct 61 RRESTQPAVSGFFGVAGCALVAYLVGQSKGYFLLGIWMSLLWAVVFALSIVVRRPVVGFL 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW SGRD+ WR+V RAV+AFDVATLGWTLVFAARFIVQR LYDADKTGWLGVARIGMGW
Sbjct 121 WSWTSGRDQGWREVPRAVYAFDVATLGWTLVFAARFIVQRLLYDADKTGWLGVARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
PLTA+AALATYAAIKAA+RA+ A+ + A AA D +A RE
Sbjct 181 PLTAVAALATYAAIKAARRAMPAADEPEAAEVAA-VDTEACRE 222
>gi|240169705|ref|ZP_04748364.1| integral membrane alanine and leucine rich protein [Mycobacterium
kansasii ATCC 12478]
Length=251
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/223 (77%), Positives = 192/223 (87%), Gaps = 1/223 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
++ +R SA+RLLAQAGGVSGLVYSSLPVV FV S AGLLPAIG A+ +A L+LL RL+
Sbjct 29 MSTHRISAERLLAQAGGVSGLVYSSLPVVVFVAVSGVAGLLPAIGSAVGVAALVLLLRLI 88
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRES +P ++GF GVAVCALIAYLVGQSKGYFLLGIWMSLLWAV+F LS++IRRP VG L
Sbjct 89 RRESTQPAISGFFGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVIFALSVVIRRPAVGVL 148
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW +GRDR WRDV RA +AFD+AT+GWTLVFAARFIVQR LYDADKTGWLGVARIGMGW
Sbjct 149 WSWAAGRDRGWRDVPRARYAFDIATVGWTLVFAARFIVQRLLYDADKTGWLGVARIGMGW 208
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
PLTA+AALATYAAIKAAQRA + +A AV G AE D DAGRE
Sbjct 209 PLTAMAALATYAAIKAAQRA-MPVLEAPAVAGVAEIDTDAGRE 250
>gi|118618656|ref|YP_906988.1| integral membrane alanine and leucine rich protein [Mycobacterium
ulcerans Agy99]
gi|118570766|gb|ABL05517.1| conserved integral membrane alanine and leucine rich protein
[Mycobacterium ulcerans Agy99]
Length=223
Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/223 (76%), Positives = 192/223 (87%), Gaps = 1/223 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
++ANR SA+ LLAQ GGVSGLVYSS+PVV FV SS GLLPAIG AL+ AGL+LL RL+
Sbjct 1 MSANRVSAESLLAQVGGVSGLVYSSVPVVIFVAVSSIGGLLPAIGSALAAAGLVLLLRLI 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRES +P V+GF GVA CAL+AYLVGQSKGYFLLGIWMSLLWAVVF LSI++RRP+VG+L
Sbjct 61 RRESTQPAVSGFFGVAGCALVAYLVGQSKGYFLLGIWMSLLWAVVFALSIVVRRPVVGFL 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW SGRD+ WR+V RAV+AFDVATLGWTLVFAARFIVQR LYDADKTGWLGVARIGMGW
Sbjct 121 WSWTSGRDQGWREVPRAVYAFDVATLGWTLVFAARFIVQRLLYDADKTGWLGVARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
PLTA+AALATYAAIKAA+RA+ A+ + A AA D +A RE
Sbjct 181 PLTAVAALATYAAIKAARRAMPAADEPEAAEVAA-VDTEACRE 222
>gi|120403461|ref|YP_953290.1| hypothetical protein Mvan_2471 [Mycobacterium vanbaalenii PYR-1]
gi|119956279|gb|ABM13284.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=236
Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/201 (69%), Positives = 162/201 (81%), Gaps = 3/201 (1%)
Query 4 NRTSAQR---LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+TS R +L Q GG+SGL+YSSLPVV FV SSA GL+PAIG AL +A LIL+WRL
Sbjct 11 QQTSPARGAAVLEQMGGISGLIYSSLPVVVFVPISSAFGLIPAIGAALGVATLILIWRLA 70
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
R+ESA+P ++GF V + ALIAYLVG SKGYFLLGIWMSL WAVVFTLSI+IRRP+VGY+
Sbjct 71 RKESAQPAISGFFAVGISALIAYLVGASKGYFLLGIWMSLFWAVVFTLSIVIRRPVVGYI 130
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
W+W+ DR WR+ RAV AFD ATL W VF +RF+VQ HLYDAD+TGWLGVARI MGW
Sbjct 131 WAWVHANDRRWREARRAVLAFDAATLVWVAVFTSRFVVQHHLYDADQTGWLGVARIAMGW 190
Query 181 PLTALAALATYAAIKAAQRAI 201
PLTA+AAL TY AI+AAQRA+
Sbjct 191 PLTAVAALVTYLAIRAAQRAL 211
>gi|336458811|gb|EGO37768.1| Protein of unknown function (DUF3159) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=234
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/212 (70%), Positives = 174/212 (83%), Gaps = 0/212 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+ ANR + +RLLAQAGGVSG++YSSLPVV FV+ASS +GL+ AI AL +A L+LLWRL+
Sbjct 22 MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLV 81
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RR+S +P ++GF GVA+CALIAY+VG+SKGYFLLGIWMSLLWAVV S+LIRRP+VGY
Sbjct 82 RRDSPQPAISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYA 141
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW GR WR V RAV+AFDVA+L W LVFAARF+VQ LYDAD+TGWL ARIGMGW
Sbjct 142 WSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRTGWLAAARIGMGW 201
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGG 212
PLT LAALATYAAIK+AQRAI A A+ G
Sbjct 202 PLTVLAALATYAAIKSAQRAIAAVELASGAAG 233
>gi|118464117|ref|YP_882761.1| hypothetical protein MAV_3584 [Mycobacterium avium 104]
gi|254776025|ref|ZP_05217541.1| hypothetical protein MaviaA2_15335 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165404|gb|ABK66301.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=213
Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/212 (70%), Positives = 174/212 (83%), Gaps = 0/212 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+ ANR + +RLLAQAGGVSG++YSSLPVV FV+ASS +GL+ AI AL +A L+LLWRL+
Sbjct 1 MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLV 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RR+S +P ++GF GVA+CALIAY+VG+SKGYFLLGIWMSLLWAVV S+LIRRP+VGY
Sbjct 61 RRDSPQPAISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYA 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW GR WR V RAV+AFDVA+L W LVFAARF+VQ LYDAD+TGWL ARIGMGW
Sbjct 121 WSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRTGWLAAARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGG 212
PLT LAALATYAAIK+AQRAI A A+ G
Sbjct 181 PLTVLAALATYAAIKSAQRAIAAVELASGAAG 212
>gi|41408908|ref|NP_961744.1| hypothetical protein MAP2810c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397267|gb|AAS05127.1| hypothetical protein MAP_2810c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=213
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/212 (70%), Positives = 173/212 (82%), Gaps = 0/212 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+ ANR + +RLLAQAGGVSG++YSSLPVV FV+ASS +GL+ AI AL +A L+LLWRL+
Sbjct 1 MTANRINPERLLAQAGGVSGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLV 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RR+S +P ++GF GVA+CALIAY+VG+SKGYFLLGIWMSLLWAVV S+LIRRP+VGY
Sbjct 61 RRDSPQPAISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVGYA 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW GR WR V RAV+AFDVA+L W LVFAARF+VQ LYDAD+TGWL ARIGMGW
Sbjct 121 WSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRTGWLAAARIGMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGG 212
PLT LAAL TYAAIK+AQRAI A A+ G
Sbjct 181 PLTVLAALPTYAAIKSAQRAIAAVELASGAAG 212
>gi|108799162|ref|YP_639359.1| hypothetical protein Mmcs_2195 [Mycobacterium sp. MCS]
gi|119868277|ref|YP_938229.1| hypothetical protein Mkms_2241 [Mycobacterium sp. KMS]
gi|126434770|ref|YP_001070461.1| hypothetical protein Mjls_2184 [Mycobacterium sp. JLS]
gi|108769581|gb|ABG08303.1| hypothetical protein Mmcs_2195 [Mycobacterium sp. MCS]
gi|119694366|gb|ABL91439.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234570|gb|ABN97970.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=221
Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/201 (68%), Positives = 162/201 (81%), Gaps = 0/201 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T AQ +LAQ GGVSGL+YSSLPVV FV SS AGL+PAI AL +A LIL+WRL+RR+
Sbjct 16 KPTGAQAILAQMGGVSGLIYSSLPVVVFVPVSSIAGLIPAIVAALGVAALILVWRLVRRD 75
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
+ +P ++GF GV V ALIAYLVG+SKGYFLLGIWMSL WA VF LS+LIRRP+VGY+W W
Sbjct 76 TVQPAISGFIGVGVSALIAYLVGESKGYFLLGIWMSLFWASVFALSVLIRRPVVGYIWGW 135
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
++G WR + AV AFD AT+ W VF +RFIVQRHLYDAD+TGWLGVARI MGWPLT
Sbjct 136 INGHSDQWRKMPTAVRAFDFATVTWVAVFLSRFIVQRHLYDADQTGWLGVARIAMGWPLT 195
Query 184 ALAALATYAAIKAAQRAILAS 204
A+AAL TY AI++AQRA+ A+
Sbjct 196 AVAALVTYFAIRSAQRALHAA 216
>gi|296171882|ref|ZP_06852962.1| integral membrane alanine and leucine rich protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295893918|gb|EFG73688.1| integral membrane alanine and leucine rich protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=239
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/214 (66%), Positives = 174/214 (82%), Gaps = 3/214 (1%)
Query 2 NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLR 61
R + +RLL QAGGVSG++YSSLPVV FV+ASS +GLL AI AL++A L+LLWRL+R
Sbjct 23 TTGRITPERLLVQAGGVSGVIYSSLPVVVFVIASSVSGLLVAIASALAVAALVLLWRLIR 82
Query 62 RESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLW 121
R+S +P +GF GVA+CAL+AY+VG+SKGYFLLGIWMSLLWAVV +S++ RRP+VGY+W
Sbjct 83 RDSPQPAFSGFFGVAICALVAYVVGESKGYFLLGIWMSLLWAVVVAVSVVARRPLVGYVW 142
Query 122 SWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWP 181
SW SGR R WR+V RAV+AFD+A+L W LVFA RF+VQR LYDA++TGWL VARI MGWP
Sbjct 143 SWASGRGRGWREVPRAVYAFDIASLCWALVFAVRFVVQRLLYDANQTGWLAVARIAMGWP 202
Query 182 LTALAALATYAAIKAAQRAILASHDAAAVGGAAE 215
LT +AAL TYAAIK+ QRA+ A+ D GG E
Sbjct 203 LTVVAALVTYAAIKSVQRALPAAGD---TGGQIE 233
>gi|342858440|ref|ZP_08715095.1| hypothetical protein MCOL_06181 [Mycobacterium colombiense CECT
3035]
gi|342134144|gb|EGT87324.1| hypothetical protein MCOL_06181 [Mycobacterium colombiense CECT
3035]
Length=218
Score = 254 bits (648), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 178/210 (85%), Gaps = 1/210 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+ +NR + +RLLAQAGGVSG++YSSLPVV FVVASS +GL+PAI AL +A LIL+WRL+
Sbjct 1 MTSNRINPERLLAQAGGVSGVIYSSLPVVVFVVASSVSGLVPAIVAALGVAALILVWRLI 60
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RR+S +P +GF GVA+CALIAY++G+SKGYFLLGIWMSL+WAVV S+LIRRP+VGY
Sbjct 61 RRDSPQPAFSGFFGVALCALIAYVLGESKGYFLLGIWMSLVWAVVVAASVLIRRPLVGYG 120
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
WSW +GR WR+V RAV+AFD+A++GW LVFAARF+VQ LYDAD+TGWL VARI MGW
Sbjct 121 WSWATGRGDGWREVPRAVYAFDIASVGWVLVFAARFVVQGLLYDADRTGWLAVARIAMGW 180
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAV 210
PLT LAALATYAAIK+AQRA LA+ D A V
Sbjct 181 PLTVLAALATYAAIKSAQRA-LAAADGATV 209
>gi|315444841|ref|YP_004077720.1| hypothetical protein Mspyr1_32740 [Mycobacterium sp. Spyr1]
gi|315263144|gb|ADT99885.1| hypothetical protein Mspyr1_32740 [Mycobacterium sp. Spyr1]
Length=230
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/210 (65%), Positives = 162/210 (78%), Gaps = 7/210 (3%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
+L Q GG+SGL+YSSLPVV FV SSA GLLPAI AL +A LIL+WRL+RRE+A+P ++
Sbjct 20 VLEQMGGISGLIYSSLPVVVFVPVSSAFGLLPAIAAALGVATLILIWRLVRRETAQPAIS 79
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF V + ALIAYLVG SKGYFLLGIWMSL WAVVF LS+ IRRP+VGY+W W++ DR
Sbjct 80 GFFAVGISALIAYLVGASKGYFLLGIWMSLFWAVVFALSVAIRRPVVGYIWGWVNTHDRR 139
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR+V RAV AFD+ATL W VF +RF+VQ HLYDAD+TGWLGVARI MGWPLTA+AAL T
Sbjct 140 WREVRRAVLAFDLATLVWVAVFTSRFVVQHHLYDADQTGWLGVARIAMGWPLTAVAALVT 199
Query 191 YAAIKAAQRAILASHDAAAVGGAAEFDADA 220
Y AI+ AQR + + G + D DA
Sbjct 200 YLAIRRAQRYVREA-------GLGDTDTDA 222
>gi|145224510|ref|YP_001135188.1| hypothetical protein Mflv_3929 [Mycobacterium gilvum PYR-GCK]
gi|145216996|gb|ABP46400.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=207
Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/205 (66%), Positives = 160/205 (79%), Gaps = 7/205 (3%)
Query 16 GGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGV 75
GG+SGL+YSSLPVV FV SSA GLLPAI AL +A LIL+WRL+RRE+A+P ++GF V
Sbjct 2 GGISGLIYSSLPVVVFVPVSSAFGLLPAIAAALGVATLILIWRLVRRETAQPAISGFFAV 61
Query 76 AVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVS 135
+ ALIAYLVG SKGYFLLGIWMSL WAVVF LS++IRRP+VGY+W W++ DR WR+V
Sbjct 62 GISALIAYLVGASKGYFLLGIWMSLFWAVVFALSVVIRRPVVGYIWGWVNTHDRRWREVR 121
Query 136 RAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIK 195
RAV AFD+ATL W VF +RF+VQ HLYDAD+TGWLGVARI MGWPLTA+AAL TY AI+
Sbjct 122 RAVLAFDLATLVWVAVFTSRFVVQHHLYDADQTGWLGVARIAMGWPLTAVAALVTYLAIR 181
Query 196 AAQRAILASHDAAAVGGAAEFDADA 220
AQR + + G + D DA
Sbjct 182 RAQRYVREA-------GLGDTDTDA 199
>gi|333991075|ref|YP_004523689.1| integral membrane alanine and leucine rich protein [Mycobacterium
sp. JDM601]
gi|333487042|gb|AEF36434.1| integral membrane alanine and leucine rich protein [Mycobacterium
sp. JDM601]
Length=233
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/193 (70%), Positives = 155/193 (81%), Gaps = 0/193 (0%)
Query 9 QRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPV 68
QRLL Q GGVSGL+YSSLP+V FV SS GL A+ AL++A +L WRL+RRES +P
Sbjct 22 QRLLDQIGGVSGLIYSSLPIVVFVPTSSLFGLRAAVVAALTVAAAVLAWRLIRRESTQPA 81
Query 69 VAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRD 128
V+GF GVAVCALIAYL+G SKGYFLLGIW SL WA+VF SILIRRP VGY+WSW SG+
Sbjct 82 VSGFFGVAVCALIAYLMGDSKGYFLLGIWTSLAWALVFAGSILIRRPAVGYIWSWASGQS 141
Query 129 RAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAAL 188
RAWR V AV+A+DVATL W LVF +RF VQR LYDAD+TGWLGVARI MGWPLTALAA+
Sbjct 142 RAWRGVRAAVYAYDVATLTWVLVFGSRFAVQRLLYDADQTGWLGVARIAMGWPLTALAAV 201
Query 189 ATYAAIKAAQRAI 201
TY A+K QRA+
Sbjct 202 VTYLAVKYVQRAL 214
>gi|254821708|ref|ZP_05226709.1| hypothetical protein MintA_17362 [Mycobacterium intracellulare
ATCC 13950]
Length=229
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/207 (69%), Positives = 170/207 (83%), Gaps = 0/207 (0%)
Query 2 NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLR 61
+R S +RLLAQAGGVSG++YSSLPVV FV+ SS +GL+PAI AL +A L+LLWRL+R
Sbjct 17 TTSRISPERLLAQAGGVSGVIYSSLPVVVFVIVSSVSGLVPAIAAALGVAALVLLWRLIR 76
Query 62 RESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLW 121
R+S +P ++GF GVA+CALIAY++G+SKGYFLLGIWMSL+WAVV S+ IRRP+VGY W
Sbjct 77 RDSPQPALSGFFGVALCALIAYVLGESKGYFLLGIWMSLVWAVVVAASVAIRRPLVGYAW 136
Query 122 SWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWP 181
SW +GR WR V RAV AFD+A+LGW LVF +RF+VQ LYDAD+TGWL ARIGMGWP
Sbjct 137 SWATGRGDGWRSVPRAVLAFDIASLGWVLVFTSRFVVQGLLYDADRTGWLAAARIGMGWP 196
Query 182 LTALAALATYAAIKAAQRAILASHDAA 208
LT LAALATYAAIK+AQRAI A + A
Sbjct 197 LTVLAALATYAAIKSAQRAIAAGAELA 223
>gi|118473532|ref|YP_887100.1| integral membrane alanine and leucine rich protein [Mycobacterium
smegmatis str. MC2 155]
gi|118174819|gb|ABK75715.1| probable conserved integral membrane alanine and leucine rich
protein [Mycobacterium smegmatis str. MC2 155]
Length=247
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/217 (62%), Positives = 166/217 (77%), Gaps = 4/217 (1%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
+L Q GG+SGL+YSSLPVV FV SS GL AI AL++A LIL+WRL+RR+S +P ++
Sbjct 27 VLEQMGGISGLIYSSLPVVVFVPVSSLFGLTAAIASALAVATLILIWRLIRRDSVQPAIS 86
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF V V ALIAY+VG+SKGYFLLGIW SL++AVVF +S+LIRRP+VGY+W W+ D
Sbjct 87 GFFAVGVSALIAYMVGESKGYFLLGIWSSLIYAVVFGISVLIRRPVVGYIWGWVHTDDAG 146
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WRDV +AV AFD+ATL W VF +RF+VQ HLYDAD+T WLGVARI MGWPLTA+AAL T
Sbjct 147 WRDVRKAVRAFDIATLTWVAVFGSRFVVQNHLYDADETTWLGVARIAMGWPLTAVAALVT 206
Query 191 YAAIKAAQRAI----LASHDAAAVGGAAEFDADAGRE 223
Y AI++AQRA+ A H AA G +E A++G E
Sbjct 207 YLAIRSAQRAVREHQAARHIDAATGSGSEPAAESGAE 243
>gi|312139444|ref|YP_004006780.1| integral membrane protein [Rhodococcus equi 103S]
gi|311888783|emb|CBH48095.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=241
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/212 (52%), Positives = 140/212 (67%), Gaps = 0/212 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T Q +L Q GG+SGL+YSSLP+V FV A+S GL PA+ AL +A IL+WRL++R
Sbjct 8 TETKQQTILEQLGGLSGLIYSSLPIVVFVPANSLWGLAPAVWTALGVAAAILVWRLVKRG 67
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
+P ++GF GV VCA IAY G +KGYFL GI+ SLL+A VF +SIL+R P+VG W +
Sbjct 68 PIQPAISGFLGVGVCAFIAYRTGDAKGYFLFGIYTSLLYAAVFLVSILVRWPLVGVAWGY 127
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G W+ AV A+DVAT W LVF AR++VQ LYDAD+TGWL ARIGMGWPLT
Sbjct 128 LNGHRNIWKSHKGAVRAYDVATAAWALVFGARYLVQSELYDADQTGWLAAARIGMGWPLT 187
Query 184 ALAALATYAAIKAAQRAILASHDAAAVGGAAE 215
L L T A++ A R + + + E
Sbjct 188 GLVLLVTIWAVRRADRLVEPAPEQPDAAAEPE 219
>gi|325672668|ref|ZP_08152364.1| integral membrane alanine and leucine rich protein [Rhodococcus
equi ATCC 33707]
gi|325556545|gb|EGD26211.1| integral membrane alanine and leucine rich protein [Rhodococcus
equi ATCC 33707]
Length=241
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/198 (55%), Positives = 137/198 (70%), Gaps = 0/198 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T Q +L Q GG+SGL+YSSLP+V FV A+S GL PA+ AL +A IL+WRL++R
Sbjct 8 TETKQQTILEQLGGLSGLIYSSLPIVVFVPANSLWGLAPAVWTALGVAAAILVWRLVKRG 67
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
+P ++GF GV VCA IAY G +KGYFL GI+ SLL+A VF +SIL+R P+VG W +
Sbjct 68 PIQPAISGFLGVGVCAFIAYRTGDAKGYFLFGIYTSLLYAAVFLVSILVRWPLVGVAWGY 127
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G W+ AV A+DVAT W LVF AR++VQ LYDAD+TGWL ARIGMGWPLT
Sbjct 128 LNGHRNIWKSHKGAVRAYDVATAAWALVFGARYLVQSELYDADQTGWLAAARIGMGWPLT 187
Query 184 ALAALATYAAIKAAQRAI 201
L L T A++ A R +
Sbjct 188 GLVLLVTIWAVRRADRLV 205
>gi|226366227|ref|YP_002784010.1| hypothetical protein ROP_68180 [Rhodococcus opacus B4]
gi|226244717|dbj|BAH55065.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length=226
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/218 (51%), Positives = 141/218 (65%), Gaps = 2/218 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T Q +L Q GG+SGL+YS+LP++ FV + GL PAI AL +A IL+WRL+RR
Sbjct 2 TETKQQSILDQLGGISGLIYSTLPILVFVPVNGVWGLGPAIWAALGVAVAILVWRLVRRS 61
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
+P V+GF GV + A IAY G +KGYFL GI+ SL + VF +SIL+RRP+VG +W +
Sbjct 62 PIQPAVSGFFGVGISAFIAYRTGDAKGYFLFGIYTSLAYGAVFLVSILVRRPLVGLIWGF 121
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G WR AV A+DVAT W LVFAAR++VQ LYD+D+TGWL ARI MGWPL
Sbjct 122 LNGHGNLWRRHRGAVRAYDVATAAWALVFAARYLVQSQLYDSDQTGWLAFARIAMGWPLA 181
Query 184 ALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAG 221
LA L T A++ A R + A GA D +AG
Sbjct 182 GLALLVTIWAVRRADR--IVEPGPAEDTGAPTDDTEAG 217
>gi|169630079|ref|YP_001703728.1| hypothetical protein MAB_2996c [Mycobacterium abscessus ATCC
19977]
gi|169242046|emb|CAM63074.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=247
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/208 (52%), Positives = 141/208 (68%), Gaps = 0/208 (0%)
Query 2 NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLR 61
+ + QAGG G+VYSS+PV+ FVVA S + L+PAI AL A L+L+WRL+R
Sbjct 34 EPGSSPLHEMWHQAGGWQGIVYSSIPVIVFVVAVSVSSLIPAIISALVAATLVLIWRLVR 93
Query 62 RESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLW 121
RES +P V+GF V + ALIAYL+G++KGYFL+GIW + W VF +S++IRRPIVGY +
Sbjct 94 RESVQPAVSGFISVGISALIAYLLGEAKGYFLIGIWANFFWGTVFLVSVIIRRPIVGYAY 153
Query 122 SWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWP 181
SW +G D +WR R V AFD+AT+ W ++FA RF+VQ LY A T WLG A+I MGWP
Sbjct 154 SWATGGDMSWRGNRRIVTAFDIATVSWIVLFAVRFVVQEWLYLAGNTAWLGGAKIAMGWP 213
Query 182 LTALAALATYAAIKAAQRAILASHDAAA 209
LTA+ AL T I+ +R + D A
Sbjct 214 LTAVGALVTLLVIRYVRRHTDQAEDRAP 241
>gi|111023791|ref|YP_706763.1| hypothetical protein RHA1_ro06833 [Rhodococcus jostii RHA1]
gi|110823321|gb|ABG98605.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=226
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 140/218 (65%), Gaps = 2/218 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T Q +L Q GG+SGLVYS+LP++ FV + GL PAI A+ +A IL+WRL+RR
Sbjct 2 TETKQQSILEQLGGLSGLVYSTLPILVFVPVNGVWGLGPAIWAAIGVAVAILVWRLVRRS 61
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
+P V+GF GV + A IAY G +KGYFL GI+ SL + VF +SIL+R PIVG +W +
Sbjct 62 PIQPAVSGFVGVGISAFIAYRTGDAKGYFLFGIYTSLAYGAVFLISILVRWPIVGLIWGF 121
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G WR AV A+DVAT W LVFAAR++VQ LYD+D+TGWL ARI MGWPL
Sbjct 122 LNGHGNLWRRHRGAVRAYDVATAAWALVFAARYLVQSQLYDSDQTGWLAFARIAMGWPLA 181
Query 184 ALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAG 221
LA L T A++ A R + + A G D +AG
Sbjct 182 GLALLVTIWAVRRADRIVEPAPSDDA--GEPTDDTEAG 217
>gi|226306313|ref|YP_002766273.1| hypothetical protein RER_28260 [Rhodococcus erythropolis PR4]
gi|226185430|dbj|BAH33534.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=237
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/220 (48%), Positives = 136/220 (62%), Gaps = 1/220 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T + ++ Q GG+SGL+YSSLP++ FV +S L AI AL +A I WRL R++
Sbjct 2 TETQQRSVIDQLGGLSGLIYSSLPILIFVPVNSIWNLTAAIWAALGVAVAIAAWRLFRKD 61
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
S +P ++GF GV V A IAY G +KGYFL GI+ SL + VF +SIL+R P+VG +W +
Sbjct 62 SLQPAISGFLGVGVSAFIAYRTGDAKGYFLFGIYTSLAYGAVFLISILVRWPLVGIIWGY 121
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G WR S AV +D+AT W LVF AR++VQ LYD D TGWL VARIGMGWPLT
Sbjct 122 LNGHGNLWRKHSSAVRLYDIATAAWALVFGARYLVQSQLYDTDHTGWLAVARIGMGWPLT 181
Query 184 ALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE 223
L L T A++ A R I+ + DAG E
Sbjct 182 GLVLLVTVWAVRKADR-IVEPEPVVERESSEPTATDAGSE 220
>gi|229491273|ref|ZP_04385099.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321812|gb|EEN87607.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=237
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/196 (52%), Positives = 129/196 (66%), Gaps = 0/196 (0%)
Query 4 NRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRE 63
T + ++ Q GG+SGL+YSSLP++ FV +S L AI AL +A I WRL R++
Sbjct 2 TETQQRSVIDQLGGLSGLIYSSLPILIFVPVNSIWNLTAAIWAALGVAVAIAAWRLFRKD 61
Query 64 SARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSW 123
S +P ++GF GV V A IAY G +KGYFL GI+ SL + VF +SIL+R P+VG +W +
Sbjct 62 SLQPAISGFLGVGVSAFIAYRTGDAKGYFLFGIYTSLAYGAVFLISILVRWPLVGIIWGY 121
Query 124 LSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLT 183
L+G WR S AV +DVAT W LVF AR++VQ LYD D TGWL VARIGMGWPLT
Sbjct 122 LNGHGNLWRKHSSAVRLYDVATAAWALVFGARYLVQSQLYDTDHTGWLAVARIGMGWPLT 181
Query 184 ALAALATYAAIKAAQR 199
L L T A++ A R
Sbjct 182 GLVLLVTVWAVRKADR 197
>gi|333919441|ref|YP_004493022.1| hypothetical protein AS9A_1773 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481662|gb|AEF40222.1| hypothetical protein AS9A_1773 [Amycolicicoccus subflavus DQS3-9A1]
Length=229
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/211 (46%), Positives = 141/211 (67%), Gaps = 0/211 (0%)
Query 9 QRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPV 68
Q L Q GGVSGL+ S++P+V F+V ++ AGL AI AL A +L+WR++R+++ +P
Sbjct 6 QSRLDQLGGVSGLIQSTVPIVVFIVTNTIAGLTAAIWVALGAAVAVLVWRMVRKDAIQPA 65
Query 69 VAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRD 128
++GF GV +CA IA+ G+++G+FL GI+ SL++ VF LS+L+R P+VG LWS+L+ R
Sbjct 66 ISGFIGVGICAFIAHRTGEARGFFLFGIYTSLVYGSVFLLSVLVRWPLVGVLWSFLNERG 125
Query 129 RAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAAL 188
AWR A+ +D+AT W LVF AR++VQ HLYD D+TG L AR+ MGWPL A+A L
Sbjct 126 TAWRRNRTALRYYDLATGVWVLVFGARYLVQAHLYDTDQTGMLAFARLAMGWPLAAVAFL 185
Query 189 ATYAAIKAAQRAILASHDAAAVGGAAEFDAD 219
A++ A +AI + + E D D
Sbjct 186 VCVIAVRKADQAIEDASRGDEASASGESDPD 216
>gi|291006909|ref|ZP_06564882.1| integral membrane alanine and leucine rich protein [Saccharopolyspora
erythraea NRRL 2338]
Length=252
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/195 (51%), Positives = 139/195 (72%), Gaps = 0/195 (0%)
Query 5 RTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRES 64
+ + + +L Q GGVSGL YS++P+V FVV S+ A L+ AI A+ +A I + RL+R+E
Sbjct 36 QEAEKTMLEQMGGVSGLAYSAVPIVVFVVISTLASLMVAIWSAIGVALAIAVVRLVRKEP 95
Query 65 ARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWL 124
+P ++G GVAVC+ IAY G++KG+FLLGIW SL++ VF +SI+ R P+VG WS L
Sbjct 96 LQPAISGVIGVAVCSFIAYRSGEAKGFFLLGIWTSLVYGGVFLVSIVARWPLVGVAWSAL 155
Query 125 SGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTA 184
+G +WR RA+ +D+ATL WT+VFAA+F+VQ+ LY +D+TGWL ARI MG+PLT
Sbjct 156 NGLGFSWRKHRRAMLGYDLATLAWTVVFAAKFVVQQWLYVSDETGWLAFARIAMGYPLTG 215
Query 185 LAALATYAAIKAAQR 199
LA L T A++ A +
Sbjct 216 LALLVTVWAVRRASK 230
>gi|134098389|ref|YP_001104050.1| integral membrane alanine and leucine rich protein [Saccharopolyspora
erythraea NRRL 2338]
gi|133911012|emb|CAM01125.1| probable conserved integral membrane alanine and leucine rich
protein [Saccharopolyspora erythraea NRRL 2338]
Length=235
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/195 (51%), Positives = 139/195 (72%), Gaps = 0/195 (0%)
Query 5 RTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRES 64
+ + + +L Q GGVSGL YS++P+V FVV S+ A L+ AI A+ +A I + RL+R+E
Sbjct 19 QEAEKTMLEQMGGVSGLAYSAVPIVVFVVISTLASLMVAIWSAIGVALAIAVVRLVRKEP 78
Query 65 ARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWL 124
+P ++G GVAVC+ IAY G++KG+FLLGIW SL++ VF +SI+ R P+VG WS L
Sbjct 79 LQPAISGVIGVAVCSFIAYRSGEAKGFFLLGIWTSLVYGGVFLVSIVARWPLVGVAWSAL 138
Query 125 SGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTA 184
+G +WR RA+ +D+ATL WT+VFAA+F+VQ+ LY +D+TGWL ARI MG+PLT
Sbjct 139 NGLGFSWRKHRRAMLGYDLATLAWTVVFAAKFVVQQWLYVSDETGWLAFARIAMGYPLTG 198
Query 185 LAALATYAAIKAAQR 199
LA L T A++ A +
Sbjct 199 LALLVTVWAVRRASK 213
>gi|227542246|ref|ZP_03972295.1| alanine/leucine rich integral membrane protein [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182075|gb|EEI63047.1| alanine/leucine rich integral membrane protein [Corynebacterium
glucuronolyticum ATCC 51866]
Length=295
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/207 (51%), Positives = 137/207 (67%), Gaps = 1/207 (0%)
Query 5 RTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRES 64
A LL Q GG+SGLV ++LP+V +V A+S GL AI AL +A L+ +WRL+R+E+
Sbjct 60 EEEAPSLLDQMGGLSGLVATTLPIVVYVPANSFLGLKAAIFTALGVAALVFIWRLIRKET 119
Query 65 ARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWL 124
+P V+GF GV +CA IA+ +G +KG+FL GIWMSLL+AV+F +SI+IR P VG +W L
Sbjct 120 LQPAVSGFIGVILCAAIAWFMGDAKGFFLYGIWMSLLYAVIFLISIVIRWPAVGVVWKGL 179
Query 125 SGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTA 184
G WR RA +D AT+ W LVF ARFI+Q HLY+A T LGV +I MGWPLTA
Sbjct 180 KGDGFGWRRYPRARRYYDGATVAWVLVFIARFIIQNHLYNAASTTALGVVKILMGWPLTA 239
Query 185 LAALATYAAIKAAQRAILASHDAAAVG 211
+ L T AI+ A I+ A VG
Sbjct 240 VVLLITIWAIRKAD-GIIEEATAHGVG 265
>gi|227503488|ref|ZP_03933537.1| integral membrane alanine and leucine rich protein [Corynebacterium
accolens ATCC 49725]
gi|227075991|gb|EEI13954.1| integral membrane alanine and leucine rich protein [Corynebacterium
accolens ATCC 49725]
Length=235
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/222 (44%), Positives = 142/222 (64%), Gaps = 4/222 (1%)
Query 2 NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLR 61
+ +R + LL Q GG+ GLV ++LP+V + +S GL PA+ AL +A +I +WR++R
Sbjct 12 DQDRDTEPTLLEQMGGLPGLVAATLPIVVLIPVNSLYGLTPALISALGVAVVIAIWRIVR 71
Query 62 RESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLW 121
+++ +P ++G GVA+CA IA+ G +KGYFL GIWMSL + +LSIL R P VG +W
Sbjct 72 KQTIQPAISGLIGVAICAAIAWFTGDAKGYFLYGIWMSLALFIAASLSILFRWPAVGVIW 131
Query 122 SWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWP 181
L+G D AW+ V A A+ +AT GW ++F ARFI+QR +YDA +T LG+ RI MGWP
Sbjct 132 KGLNGDDMAWQKVKLARRAYSIATAGWAVIFLARFIIQRAIYDAGETTALGITRIVMGWP 191
Query 182 LTALAALATYAAIKAAQRAILASHDA----AAVGGAAEFDAD 219
LT L T ++ A A+ A+ +A ++ EF+A+
Sbjct 192 LTLLVTALTVWMVRRADAAVEAAENAGLATSSDRSTQEFEAE 233
>gi|334697032|gb|AEG81829.1| putative membrane protein [Corynebacterium ulcerans 809]
Length=234
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/209 (47%), Positives = 139/209 (67%), Gaps = 1/209 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
L Q GG+ GLV S+LP++ FV ++ GL + A+++A + +WRL+R+E+ +P ++
Sbjct 18 FLDQMGGLGGLVSSTLPILVFVPINNTWGLNSGLLAAIAIAIAVTVWRLMRKENLQPAIS 77
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GV +CA IA+ G +KGYFL GIWMS L ++VF +S+++R P+VG +W ++G A
Sbjct 78 GFIGVGICAAIAWWTGDAKGYFLYGIWMSGLMSLVFIVSLIVRWPMVGIIWKGINGEGMA 137
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR A A+ VATLGW LVFA RF+VQR+LYDAD T L +ARI MGWPLT L L T
Sbjct 138 WRTNVTARRAYAVATLGWALVFATRFVVQRNLYDADATNALALARILMGWPLTGLVTLLT 197
Query 191 YAAIKAAQRAILASHDAAAVGGAAEFDAD 219
+K A RA +A+ V A+ +A+
Sbjct 198 VWMVKKAARA-MATEQNMPVEETADREAN 225
>gi|305680885|ref|ZP_07403692.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305659090|gb|EFM48590.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=256
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/192 (50%), Positives = 132/192 (69%), Gaps = 0/192 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GG+SGLV S+LP++ FV ++ GL PA+ ALSMA LIL+WRL+R+E+ +P ++
Sbjct 26 LLEQMGGLSGLVSSTLPILVFVPVNNKWGLNPALIAALSMATLILVWRLIRKENLQPAIS 85
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GV + A IA+ G +KGYF GIWMSLL A+VF +SIL+R P+VG +W ++G
Sbjct 86 GFMGVGIGAAIAWYTGSAKGYFAYGIWMSLLLAIVFFISILVRWPMVGIIWKGINGDGMT 145
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
W+ V A +A+ ATLGW +VF ARF+V++ Y AD LGV I MGWPLT L + T
Sbjct 146 WQKVPGARWAYTWATLGWAVVFLARFLVKQLFYQADNVTGLGVVSILMGWPLTGLVTIFT 205
Query 191 YAAIKAAQRAIL 202
++ A+ A++
Sbjct 206 VWMVRCARTAMI 217
>gi|68536157|ref|YP_250862.1| hypothetical protein jk1080 [Corynebacterium jeikeium K411]
gi|68263756|emb|CAI37244.1| putative membrane protein [Corynebacterium jeikeium K411]
Length=254
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/184 (53%), Positives = 126/184 (69%), Gaps = 3/184 (1%)
Query 3 ANRTSAQR---LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRL 59
AN T A+ LL Q GG+SGLV S+LPV+ V +S GL PA+ AL++A LIL+WRL
Sbjct 6 ANSTDAESKETLLEQMGGLSGLVSSTLPVLVLVPVNSKWGLGPALISALAVAVLILVWRL 65
Query 60 LRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGY 119
R+E+ +P ++GF VA+CA IA+++G +KGYF GIW SL + +SI +R P+VG
Sbjct 66 TRKENLQPAISGFLAVALCAAIAWIMGDAKGYFAYGIWYSLAAGIASIISIFVRWPLVGA 125
Query 120 LWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMG 179
+W ++G D WR RAV AF++ATL W LVF ARF VQ+ LY ADKT LG RI MG
Sbjct 126 VWRGINGDDHRWRTNRRAVRAFNIATLAWALVFFARFAVQQWLYAADKTDALGYTRIAMG 185
Query 180 WPLT 183
WPLT
Sbjct 186 WPLT 189
>gi|262202188|ref|YP_003273396.1| hypothetical protein Gbro_2255 [Gordonia bronchialis DSM 43247]
gi|262085535|gb|ACY21503.1| hypothetical protein Gbro_2255 [Gordonia bronchialis DSM 43247]
Length=223
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/187 (52%), Positives = 131/187 (71%), Gaps = 0/187 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
+L Q GGVSGL+YS++P+V FV +S GL AI AL+ A + RLLRRE+ P V+
Sbjct 29 VLEQLGGVSGLIYSTVPIVVFVPVNSFFGLRAAIIAALATAVAVFGVRLLRREALTPAVS 88
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
G GVA+C IA+ VG +KGYFL GIW +L++A+VF +SI++R P+VG W ++G+
Sbjct 89 GVIGVAICVFIAHRVGDAKGYFLFGIWTTLVYALVFVVSIMVRWPLVGVAWHLVNGQGTG 148
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR R + A+D+AT W LVFAAR+++Q LYD D+TGWL VARI MGWPLTA+A L T
Sbjct 149 WRRDRRILHAYDLATALWALVFAARYLLQSQLYDHDQTGWLAVARISMGWPLTAVAVLGT 208
Query 191 YAAIKAA 197
++ A
Sbjct 209 ILLVRRA 215
>gi|337290919|ref|YP_004629940.1| hypothetical protein CULC22_01311 [Corynebacterium ulcerans BR-AD22]
gi|334699225|gb|AEG84021.1| putative membrane protein [Corynebacterium ulcerans BR-AD22]
Length=234
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/209 (47%), Positives = 138/209 (67%), Gaps = 1/209 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
L Q GG+ GLV S+LP++ FV ++ GL + A+++A +WRL+R+E+ +P ++
Sbjct 18 FLDQMGGLGGLVSSTLPILVFVPINNTWGLNIGLLAAIAIAIAATVWRLMRKENLQPAIS 77
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GV +CA IA+ G +KGYFL GIWMS L ++VF +S+++R P+VG +W ++G A
Sbjct 78 GFIGVGICAAIAWWTGDAKGYFLYGIWMSGLMSLVFIVSLIVRWPMVGIIWKGINGEGMA 137
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR A A+ VATLGW LVFA RF+VQR+LYDAD T L +ARI MGWPLT L L T
Sbjct 138 WRTNVTARRAYAVATLGWALVFATRFVVQRNLYDADATNALALARILMGWPLTGLVTLLT 197
Query 191 YAAIKAAQRAILASHDAAAVGGAAEFDAD 219
+K A RA +A+ V A+ +A+
Sbjct 198 VWMVKKAARA-MATEQNMPVEETADREAN 225
>gi|225021273|ref|ZP_03710465.1| hypothetical protein CORMATOL_01285 [Corynebacterium matruchotii
ATCC 33806]
gi|224946006|gb|EEG27215.1| hypothetical protein CORMATOL_01285 [Corynebacterium matruchotii
ATCC 33806]
Length=255
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/192 (50%), Positives = 131/192 (69%), Gaps = 0/192 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GG+SGLV S+LP++ FV ++ GL PA+ ALSMA LIL+WRL+R+E+ +P ++
Sbjct 26 LLEQMGGLSGLVSSTLPILVFVPVNNKWGLNPALIAALSMATLILVWRLIRKENLQPAIS 85
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GV + A IA+ G +KGYF GIWMSLL A+VF +SIL+R P+VG +W ++G
Sbjct 86 GFMGVGIGAAIAWYTGSAKGYFAYGIWMSLLLAIVFFISILVRWPMVGIIWKGINGDGMT 145
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
W+ V A A+ ATLGW +VF ARF+V++ Y AD LGV I MGWPLT L + T
Sbjct 146 WQKVPGARRAYTWATLGWAVVFLARFLVKQLFYQADNVTGLGVVSILMGWPLTGLVTIFT 205
Query 191 YAAIKAAQRAIL 202
++ A+ A++
Sbjct 206 VWMVRCARTAMI 217
>gi|300784517|ref|YP_003764808.1| integral membrane alanine and leucine rich protein [Amycolatopsis
mediterranei U32]
gi|299794031|gb|ADJ44406.1| integral membrane alanine and leucine rich protein [Amycolatopsis
mediterranei U32]
gi|340525938|gb|AEK41143.1| integral membrane alanine and leucine rich protein [Amycolatopsis
mediterranei S699]
Length=240
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/209 (46%), Positives = 136/209 (66%), Gaps = 3/209 (1%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GGVSGL+YSS+PV+ FV+A+S GL AI ++ A I + RL+R+E +P ++
Sbjct 20 LLEQMGGVSGLIYSSVPVIVFVLANSFFGLTAAIWTSIGSAVAITVLRLVRKEPLQPAIS 79
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GVA+ A IAY G +KG+FL GI+ SL++ +F LS+++R PI G +W+ L+G +A
Sbjct 80 GFFGVAIAAFIAYRTGSAKGFFLFGIYASLVYCGIFVLSVVVRWPIAGVVWNMLNGTGQA 139
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR + + +DVATL L+FAARF+VQR LY D TGWL A+I MG+PL AL L
Sbjct 140 WRKDKPSRYGYDVATLAMALIFAARFVVQRWLYQEDYTGWLAFAKIAMGYPLYALGLLVV 199
Query 191 YAAIKAAQRAILASHDAAAVGGAAEFDAD 219
A++ + + + A + A E DA
Sbjct 200 VWAVRRSDKRLKAMAEEEP---APETDAQ 225
>gi|227488757|ref|ZP_03919073.1| integral membrane alanine and leucine rich protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091179|gb|EEI26491.1| integral membrane alanine and leucine rich protein [Corynebacterium
glucuronolyticum ATCC 51867]
Length=226
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/196 (52%), Positives = 133/196 (68%), Gaps = 1/196 (0%)
Query 16 GGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGV 75
GG+SGLV ++LP+V +V A+S GL AI AL +A L+ +WRL+R+E+ +P V+GF GV
Sbjct 2 GGLSGLVATTLPIVVYVPANSFLGLKAAIFTALGVAALVFIWRLIRKETLQPAVSGFIGV 61
Query 76 AVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVS 135
+CA IA+ +G +KG+FL GIWMSLL+AV+F +SI+IR P VG +W L G WR
Sbjct 62 ILCAAIAWFMGDAKGFFLYGIWMSLLYAVIFLISIVIRWPAVGVVWKGLKGDGFGWRRYP 121
Query 136 RAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIK 195
RA +D AT+ W LVF ARFI+Q HLY+A T LGV +I MGWPLTA+ L T AI+
Sbjct 122 RARRYYDGATVAWVLVFIARFIIQNHLYNAASTTALGVVKILMGWPLTAVVLLITIWAIR 181
Query 196 AAQRAILASHDAAAVG 211
A I+ A VG
Sbjct 182 KAD-GIIEEATAHGVG 196
>gi|260578854|ref|ZP_05846760.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258603001|gb|EEW16272.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length=254
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/184 (53%), Positives = 126/184 (69%), Gaps = 3/184 (1%)
Query 3 ANRTSAQR---LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRL 59
AN T A+ LL Q GG+SGLV S+LPV+ V +S GL PA+ AL++A LIL+WRL
Sbjct 6 ANSTDAESKETLLEQMGGLSGLVSSTLPVLVLVPVNSQWGLGPALISALAVAVLILVWRL 65
Query 60 LRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGY 119
R+E+ +P ++GF VA+CA IA+++G +KGYF GIW SL + +SI +R P+VG
Sbjct 66 GRKENLQPAISGFLAVALCAAIAWIMGDAKGYFAYGIWYSLAAGIASIISIFVRWPLVGA 125
Query 120 LWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMG 179
+W ++G D WR RAV AF++ATL W +VF ARF VQ+ LY ADKT LG RI MG
Sbjct 126 VWRGINGDDHRWRTSRRAVRAFNIATLAWAMVFFARFAVQQWLYAADKTDALGYTRIAMG 185
Query 180 WPLT 183
WPLT
Sbjct 186 WPLT 189
>gi|227504957|ref|ZP_03935006.1| integral membrane alanine and leucine rich protein [Corynebacterium
striatum ATCC 6940]
gi|227198466|gb|EEI78514.1| integral membrane alanine and leucine rich protein [Corynebacterium
striatum ATCC 6940]
Length=243
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/191 (48%), Positives = 129/191 (68%), Gaps = 0/191 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GG+SGLV ++LPVV + ++ GL PA+ AL +A LI +WR++R+E+ +P ++
Sbjct 32 LLEQMGGLSGLVSATLPVVVLIPVNNVWGLGPALLAALGVAVLIAVWRIIRKETLQPAIS 91
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
G GV +CA IA+ G +KGYFL GIWMSL+ VV SIL+R P+VG +W ++G D
Sbjct 92 GLLGVGICAAIAWFTGDAKGYFLYGIWMSLVLFVVAAASILLRWPLVGVIWKGINGEDMR 151
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR V +A ++ +AT GW ++F ARF+VQ +Y+AD T LGV RI MGWPLT L + T
Sbjct 152 WRTVVKARRSYAIATAGWAVIFLARFLVQNAIYNADNTTALGVVRILMGWPLTGLVTILT 211
Query 191 YAAIKAAQRAI 201
++ A A+
Sbjct 212 IWMVRRANAAV 222
>gi|306836264|ref|ZP_07469246.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567856|gb|EFM43439.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=235
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/184 (48%), Positives = 124/184 (68%), Gaps = 0/184 (0%)
Query 2 NANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLR 61
+ +R + LL Q GG+ GLV ++LP+V + +S GL PA+ AL +A +I +WR++R
Sbjct 12 DQDRDTEPTLLEQMGGLPGLVAATLPIVVLIPVNSLYGLTPALISALGVAVVIAIWRIVR 71
Query 62 RESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLW 121
+++ +P ++G GVA+CA IA+ G +KGYFL GIWMSL + LSIL R P VG +W
Sbjct 72 KQTIQPAISGLIGVAICAAIAWFTGDAKGYFLYGIWMSLALFIAAALSILFRWPAVGVIW 131
Query 122 SWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWP 181
L+G D AW+ V A A+ +AT GW ++F ARFI+QR +YDA +T LG+ RI MGWP
Sbjct 132 KGLNGDDMAWQKVKLARRAYSIATAGWAVIFLARFIIQRAIYDAGETTALGITRIVMGWP 191
Query 182 LTAL 185
LT L
Sbjct 192 LTLL 195
>gi|227833270|ref|YP_002834977.1| hypothetical protein cauri_1446 [Corynebacterium aurimucosum
ATCC 700975]
gi|262184254|ref|ZP_06043675.1| hypothetical protein CaurA7_09699 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454286|gb|ACP33039.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length=251
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/212 (46%), Positives = 136/212 (65%), Gaps = 0/212 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
V ++ + LL Q GG++GLV ++LPV+ + ++ GL PA+ AL +A I +WRL
Sbjct 37 VVSDSEAEPSLLEQMGGLTGLVSATLPVLVLIPVNNVWGLGPALAAALGVALAISVWRLA 96
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
R+E+ +P V+G GVA+CA IA+ G +KGYFL GIWMSL+ +V +SI+ R P+VG +
Sbjct 97 RKETLQPAVSGLLGVAICAAIAWFTGDAKGYFLYGIWMSLVLFIVAVVSIIARWPLVGVV 156
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
W L+G D WR V +A A+ +AT GW VF ARFIVQR LYDAD+T LG+ RI MGW
Sbjct 157 WKGLNGDDMGWRTVPQARRAYALATAGWAAVFIARFIVQRALYDADETTTLGIVRILMGW 216
Query 181 PLTALAALATYAAIKAAQRAILASHDAAAVGG 212
PLT + + T ++ A A+ + + G
Sbjct 217 PLTGIVTILTVWMVRRANAAVEEAKGSEKTQG 248
>gi|300858619|ref|YP_003783602.1| hypothetical protein cpfrc_01202 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686073|gb|ADK28995.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206331|gb|ADL10673.1| Hypothetical protein CpC231_1197 [Corynebacterium pseudotuberculosis
C231]
gi|302330888|gb|ADL21082.1| Hypothetical protein Cp1002_1198 [Corynebacterium pseudotuberculosis
1002]
gi|308276573|gb|ADO26472.1| Putative membrane protein [Corynebacterium pseudotuberculosis
I19]
gi|341825016|gb|AEK92537.1| Hypothetical protein CpPAT10_1196 [Corynebacterium pseudotuberculosis
PAT10]
Length=234
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/196 (48%), Positives = 131/196 (67%), Gaps = 0/196 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
L Q GG+ GLV S+LP++ FV ++ GL + A+S+A I +WRL+R+E+ +P V+
Sbjct 18 FLDQVGGLGGLVSSTLPILIFVPINNKWGLNSGLLAAISIAIAITVWRLMRKENLQPAVS 77
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GV +CA IA+ G +KGYFL GIWMS L ++VF +S+++R P+VG +W ++G
Sbjct 78 GFIGVGICAAIAWWTGDAKGYFLYGIWMSGLMSLVFIISLIVRWPMVGIIWKGINGEGMT 137
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR A A+ VAT GW L+FA RF+VQR+LY+AD T L +ARI MGWPLT L L T
Sbjct 138 WRGNIAARRAYAVATFGWALLFATRFVVQRNLYEADATNALALARILMGWPLTGLVTLLT 197
Query 191 YAAIKAAQRAILASHD 206
+K A RA+ A +
Sbjct 198 VWMVKKAARAMNAEQN 213
>gi|120403117|ref|YP_952946.1| putative integral membrane alanine and leucine rich protein [Mycobacterium
vanbaalenii PYR-1]
gi|119955935|gb|ABM12940.1| putative conserved integral membrane alanine and leucine rich
protein [Mycobacterium vanbaalenii PYR-1]
Length=223
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/208 (46%), Positives = 132/208 (64%), Gaps = 0/208 (0%)
Query 1 VNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
+ T A LLA+AGG+ GLVY++LPV TF ++ AGL PA+ AL ++L+ +L+
Sbjct 16 MTGTSTPATVLLARAGGIRGLVYTALPVTTFAALNAVAGLTPALIAALGAGAIVLVLQLV 75
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
RRES RP + GF G+AV A +A G++K ++L GIWM L AV+FT SI++ RP++G +
Sbjct 76 RRESTRPALFGFAGIAVGAGLALATGRAKDFYLPGIWMYLAMAVLFTGSIVVGRPLIGVV 135
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
W+W++GRD WR R AF + TL V A RF VQ +LYD D+ G L VARI MGW
Sbjct 136 WAWMTGRDDTWRRTPRVRTAFVLVTLMMAAVSATRFAVQFYLYDTDQEGLLAVARIAMGW 195
Query 181 PLTALAALATYAAIKAAQRAILASHDAA 208
P+ + + Y AI+ A R + + A
Sbjct 196 PIFLVTSTLIYLAIRTAMRTLPKGAEPA 223
>gi|302525753|ref|ZP_07278095.1| integral membrane alanine and leucine rich protein [Streptomyces
sp. AA4]
gi|302434648|gb|EFL06464.1| integral membrane alanine and leucine rich protein [Streptomyces
sp. AA4]
Length=248
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/203 (44%), Positives = 132/203 (66%), Gaps = 1/203 (0%)
Query 2 NANRTSAQ-RLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLL 60
N + Q L+ Q GGVSGL YSS+PV+ FV+ ++ GL AI ++ A I + R++
Sbjct 16 NGDEPERQPTLMEQMGGVSGLFYSSVPVIVFVLLNAIFGLTAAIWGSIGSAVAITVLRVV 75
Query 61 RRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYL 120
R+E +P ++GF GVA+ A IA+ G +KG+FL GIW SL + VF +S+L+R P+ G +
Sbjct 76 RKEPLQPAISGFFGVAIAAFIAFRTGSAKGFFLFGIWASLAYCAVFVISVLVRWPLAGVV 135
Query 121 WSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGW 180
W+ L+G AWR + + +DVATL ++FAARF+VQR LYD ++TGWL A+I MG+
Sbjct 136 WNALNGNGTAWRKDKPSRYGYDVATLAMAVIFAARFVVQRWLYDGNQTGWLAFAKIAMGY 195
Query 181 PLTALAALATYAAIKAAQRAILA 203
PL A+ L A++ + + + A
Sbjct 196 PLYAIGLLVVVWAVRRSDKRLKA 218
>gi|108802187|ref|YP_642384.1| hypothetical protein Mmcs_5226 [Mycobacterium sp. MCS]
gi|119871340|ref|YP_941292.1| hypothetical protein Mkms_5314 [Mycobacterium sp. KMS]
gi|126438169|ref|YP_001073860.1| hypothetical protein Mjls_5606 [Mycobacterium sp. JLS]
gi|108772606|gb|ABG11328.1| putative conserved integral membrane alanine and leucine rich
protein [Mycobacterium sp. MCS]
gi|119697429|gb|ABL94502.1| putative conserved integral membrane alanine and leucine rich
protein [Mycobacterium sp. KMS]
gi|126237969|gb|ABO01370.1| putative conserved integral membrane alanine and leucine rich
protein [Mycobacterium sp. JLS]
Length=206
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/197 (51%), Positives = 132/197 (68%), Gaps = 0/197 (0%)
Query 9 QRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPV 68
Q LLA+AGG+ GLV ++LPV F S+ GL+PAI AL+ A ++L+W+L R ES RP
Sbjct 9 QNLLARAGGIRGLVSTALPVAAFAPTSALFGLVPAIVAALTAAAVVLVWQLARGESTRPA 68
Query 69 VAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRD 128
V GF V +CA +A++ G+SK ++L GIWM L AVVFTLS++IRRP VG +W+W +GRD
Sbjct 69 VLGFAAVGLCAAVAWITGRSKDFYLPGIWMYLGLAVVFTLSVVIRRPAVGVVWAWFTGRD 128
Query 129 RAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAAL 188
+WR V R FD ATL V RF+VQ HLYD+D+ L VARI MGWP+ +
Sbjct 129 GSWRRVRRVRRIFDGATLMMAAVSWTRFLVQYHLYDSDREALLAVARIAMGWPVFVVTTT 188
Query 189 ATYAAIKAAQRAILASH 205
Y +I+AA RA+ S
Sbjct 189 VIYLSIRAANRALTVSE 205
>gi|336325724|ref|YP_004605690.1| hypothetical protein CRES_1171 [Corynebacterium resistens DSM
45100]
gi|336101706|gb|AEI09526.1| putative membrane protein [Corynebacterium resistens DSM 45100]
Length=272
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/190 (49%), Positives = 123/190 (65%), Gaps = 0/190 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GG++GLV S+LPV+ V +S GL+PA+ AL++A I LWRL R+E+ +P ++
Sbjct 79 LLEQMGGLTGLVSSTLPVLVLVPVNSKFGLMPALLSALAVAATIFLWRLARKENLQPAIS 138
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
G GV +CA IA+ +G +KGYF G+W SL+ + F +SIL+R P+VG +W ++G D+
Sbjct 139 GLLGVVICAAIAWFMGDAKGYFAYGMWYSLVAGIAFIVSILVRWPLVGVIWRGINGEDQR 198
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR AV AF AT W +VF ARF V+R Y D T LG I MGWPLTAL L T
Sbjct 199 WRTNRHAVRAFSWATAAWAVVFLARFFVKRFFYVKDATDALGYVSIAMGWPLTALVVLIT 258
Query 191 YAAIKAAQRA 200
A+K A A
Sbjct 259 VVAVKKANAA 268
>gi|257056413|ref|YP_003134245.1| hypothetical protein Svir_24230 [Saccharomonospora viridis DSM
43017]
gi|256586285|gb|ACU97418.1| hypothetical protein Svir_24230 [Saccharomonospora viridis DSM
43017]
Length=270
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/210 (48%), Positives = 134/210 (64%), Gaps = 2/210 (0%)
Query 11 LLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVA 70
LL Q GGVSGL YSS+PVV FV ++ GL+PAI AL A +I + R++R+E +P V+
Sbjct 38 LLEQMGGVSGLFYSSIPVVVFVAVNAMFGLMPAIWSALGSAVVITVVRVVRKEPVQPAVS 97
Query 71 GFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRA 130
GF GVA+ A IAY G +KG+FL GIW SL++ V S+++R P+ G +WS+L+G A
Sbjct 98 GFFGVAIAAFIAYNTGSAKGFFLFGIWTSLVYFAVLAGSVVVRWPLAGVVWSFLNGSGMA 157
Query 131 WRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALAT 190
WR + +D+ATL VFA+RF+VQR LYD D TGWL A+I MG+PL LA L
Sbjct 158 WRKDKPSRRGYDIATLALAAVFASRFVVQRWLYDEDLTGWLAFAKIVMGYPLYGLALLVV 217
Query 191 YAAIKAAQRAI--LASHDAAAVGGAAEFDA 218
A++ + R + LA H V E +A
Sbjct 218 VWAVRRSDRRLQQLAEHTEQRVETDEEIEA 247
>gi|296117765|ref|ZP_06836349.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306]
gi|295969496|gb|EFG82737.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306]
Length=278
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/203 (47%), Positives = 134/203 (67%), Gaps = 2/203 (0%)
Query 1 VNANRT--SAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWR 58
V A R Q LL Q GG GLV ++LP+V V +S GL PA+ AL++A +IL+WR
Sbjct 31 VKAERKPIEEQTLLEQMGGWQGLVSTTLPIVVLVPVNSKWGLGPALIAALAVALVILVWR 90
Query 59 LLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVG 118
++R+E+ +P ++GF GVA CA IA+ G +KGYFL GIW SL++AVV S+L + P VG
Sbjct 91 VVRKETIQPAISGFLGVAFCAAIAWFTGDAKGYFLYGIWASLVFAVVALASVLFKWPAVG 150
Query 119 YLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGM 178
+W ++G D W+ V+ A A+ +ATLGW ++F ARFIVQ +LY++ T LG+ RI M
Sbjct 151 VIWKGINGEDMMWQRVTPARRAYAIATLGWVVIFVARFIVQNNLYNSSDTTTLGIVRILM 210
Query 179 GWPLTALAALATYAAIKAAQRAI 201
GWPLT + T ++ A +AI
Sbjct 211 GWPLTGVVTALTVWMVRRANKAI 233
>gi|333025565|ref|ZP_08453629.1| putative integral membrane alanine and leucine rich protein [Streptomyces
sp. Tu6071]
gi|332745417|gb|EGJ75858.1| putative integral membrane alanine and leucine rich protein [Streptomyces
sp. Tu6071]
Length=272
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/207 (48%), Positives = 135/207 (66%), Gaps = 0/207 (0%)
Query 12 LAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAG 71
+ Q GG GL+Y+ LP++ FVVA++A GL AI A+++A + + RL+R+ES +P + G
Sbjct 1 MDQLGGPRGLLYTGLPIIAFVVANAAFGLTAAIVTAMAVAVGLAVLRLVRKESVQPAIGG 60
Query 72 FCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAW 131
GV +L+A+ G +KGYFLLGIW SL AVV LS+LIRRP+ GY+WS L+G+ + W
Sbjct 61 IIGVGTASLVAWKTGSAKGYFLLGIWFSLAAAVVLLLSVLIRRPLAGYVWSALNGQGQEW 120
Query 132 RDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATY 191
R+ +D+ATL VFAARF+VQ+ LYD D TGWL ARI MG+PL ALA L
Sbjct 121 REDRIVRRGYDIATLALFAVFAARFVVQQWLYDHDSTGWLAFARIAMGYPLLALALLVVV 180
Query 192 AAIKAAQRAILASHDAAAVGGAAEFDA 218
A++ A + +A A G E +A
Sbjct 181 WAVRRATKRSAGLREAEARQGTREGEA 207
Lambda K H
0.327 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 282939969064
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40