BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2696c Length=259 Score E Sequences producing significant alignments: (Bits) Value gi|15609833|ref|NP_217212.1| hypothetical protein Rv2696c [Mycob... 513 8e-144 gi|31793868|ref|NP_856361.1| hypothetical protein Mb2715c [Mycob... 512 2e-143 gi|289762867|ref|ZP_06522245.1| conserved hypothetical alanine a... 399 2e-109 gi|289751349|ref|ZP_06510727.1| conserved alanine, glycine and v... 365 3e-99 gi|15827499|ref|NP_301762.1| hypothetical protein ML1029 [Mycoba... 357 1e-96 gi|183982032|ref|YP_001850323.1| hypothetical protein MMAR_2018 ... 355 4e-96 gi|240169702|ref|ZP_04748361.1| hypothetical protein MkanA1_1034... 345 3e-93 gi|118618659|ref|YP_906991.1| hypothetical protein MUL_3334 [Myc... 345 4e-93 gi|342858437|ref|ZP_08715092.1| hypothetical protein MCOL_06166 ... 325 4e-87 gi|254821643|ref|ZP_05226644.1| hypothetical protein MintA_17037... 325 4e-87 gi|108799159|ref|YP_639356.1| hypothetical protein Mmcs_2192 [My... 312 3e-83 gi|333991078|ref|YP_004523692.1| hypothetical protein JDM601_243... 312 4e-83 gi|296171859|ref|ZP_06852958.1| conserved hypothetical protein [... 300 1e-79 gi|41408911|ref|NP_961747.1| hypothetical protein MAP2813c [Myco... 292 3e-77 gi|118463014|ref|YP_882765.1| hypothetical protein MAV_3588 [Myc... 292 3e-77 gi|315444844|ref|YP_004077723.1| hypothetical protein Mspyr1_327... 273 1e-71 gi|145224513|ref|YP_001135191.1| hypothetical protein Mflv_3932 ... 273 1e-71 gi|118473654|ref|YP_887097.1| hypothetical protein MSMEG_2766 [M... 273 2e-71 gi|120403458|ref|YP_953287.1| hypothetical protein Mvan_2468 [My... 270 1e-70 gi|169630085|ref|YP_001703734.1| hypothetical protein MAB_3002c ... 270 2e-70 gi|254776028|ref|ZP_05217544.1| hypothetical protein MaviaA2_153... 246 3e-63 gi|229491247|ref|ZP_04385073.1| conserved hypothetical protein [... 190 2e-46 gi|226306310|ref|YP_002766270.1| hypothetical protein RER_28230 ... 188 6e-46 gi|226366224|ref|YP_002784007.1| hypothetical protein ROP_68150 ... 186 2e-45 gi|111023788|ref|YP_706760.1| hypothetical protein RHA1_ro06830 ... 183 2e-44 gi|325672671|ref|ZP_08152367.1| hypothetical protein HMPREF0724_... 180 2e-43 gi|312139441|ref|YP_004006777.1| hypothetical protein REQ_20340 ... 178 7e-43 gi|326384431|ref|ZP_08206111.1| hypothetical protein SCNU_15904 ... 178 7e-43 gi|54025722|ref|YP_119964.1| hypothetical protein nfa37520 [Noca... 173 2e-41 gi|300784514|ref|YP_003764805.1| hypothetical protein AMED_2608 ... 171 1e-40 gi|343924637|ref|ZP_08764181.1| hypothetical protein GOALK_021_0... 170 2e-40 gi|333919439|ref|YP_004493020.1| hypothetical protein AS9A_1771 ... 168 6e-40 gi|302525750|ref|ZP_07278092.1| conserved hypothetical protein [... 167 2e-39 gi|262202185|ref|YP_003273393.1| hypothetical protein Gbro_2252 ... 166 3e-39 gi|257056415|ref|YP_003134247.1| hypothetical protein Svir_24250... 160 1e-37 gi|296139594|ref|YP_003646837.1| hypothetical protein Tpau_1885 ... 160 2e-37 gi|134098387|ref|YP_001104048.1| hypothetical protein SACE_1808 ... 150 3e-34 gi|25028354|ref|NP_738408.1| hypothetical protein CE1798 [Coryne... 148 1e-33 gi|38233984|ref|NP_939751.1| hypothetical protein DIP1399 [Coryn... 146 4e-33 gi|227488756|ref|ZP_03919072.1| conserved hypothetical protein [... 145 5e-33 gi|213964415|ref|ZP_03392615.1| conserved hypothetical protein [... 145 6e-33 gi|336325725|ref|YP_004605691.1| hypothetical protein CRES_1172 ... 144 1e-32 gi|334564694|ref|ZP_08517685.1| hypothetical protein CbovD2_0896... 143 2e-32 gi|237785644|ref|YP_002906349.1| hypothetical protein ckrop_1054... 141 1e-31 gi|260578855|ref|ZP_05846761.1| conserved hypothetical protein [... 138 7e-31 gi|256375653|ref|YP_003099313.1| hypothetical protein Amir_1516 ... 138 8e-31 gi|68536158|ref|YP_250863.1| hypothetical protein jk1081 [Coryne... 137 2e-30 gi|145295808|ref|YP_001138629.1| hypothetical protein cgR_1733 [... 136 3e-30 gi|340794538|ref|YP_004760001.1| hypothetical protein CVAR_1574 ... 136 3e-30 gi|19553108|ref|NP_601110.1| hypothetical protein NCgl1829 [Cory... 135 5e-30 >gi|15609833|ref|NP_217212.1| hypothetical protein Rv2696c [Mycobacterium tuberculosis H37Rv] gi|15842234|ref|NP_337271.1| hypothetical protein MT2770 [Mycobacterium tuberculosis CDC1551] gi|148662537|ref|YP_001284060.1| hypothetical protein MRA_2724 [Mycobacterium tuberculosis H37Ra] 69 more sequence titles Length=259 Score = 513 bits (1322), Expect = 8e-144, Method: Compositional matrix adjust. Identities = 259/259 (100%), Positives = 259/259 (100%), Gaps = 0/259 (0%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD Sbjct 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL Sbjct 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET Sbjct 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV 240 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV Sbjct 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV 240 Query 241 ARRGAQGSAMQQLRSTTGG 259 ARRGAQGSAMQQLRSTTGG Sbjct 241 ARRGAQGSAMQQLRSTTGG 259 >gi|31793868|ref|NP_856361.1| hypothetical protein Mb2715c [Mycobacterium bovis AF2122/97] gi|121638571|ref|YP_978795.1| hypothetical protein BCG_2709c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991063|ref|YP_002645752.1| hypothetical alanine and glycine and valine rich protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31619462|emb|CAD94900.1| CONSERVED HYPOTHETICAL ALANINE AND GLYCINE AND VALINE RICH PROTEIN [Mycobacterium bovis AF2122/97] gi|121494219|emb|CAL72697.1| Conserved hypothetical alanine and glycine and valine rich protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774178|dbj|BAH26984.1| hypothetical alanine and glycine and valine rich protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602609|emb|CCC65285.1| conserved hypothetical alanine and glycine and valine rich protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=259 Score = 512 bits (1319), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 258/259 (99%), Positives = 259/259 (100%), Gaps = 0/259 (0%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD Sbjct 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL Sbjct 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGV+GYRWMIRCVVNGPQET Sbjct 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVNGYRWMIRCVVNGPQET 180 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV 240 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV Sbjct 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGV 240 Query 241 ARRGAQGSAMQQLRSTTGG 259 ARRGAQGSAMQQLRSTTGG Sbjct 241 ARRGAQGSAMQQLRSTTGG 259 >gi|289762867|ref|ZP_06522245.1| conserved hypothetical alanine and glycine and valine rich protein [Mycobacterium tuberculosis GM 1503] gi|289710373|gb|EFD74389.1| conserved hypothetical alanine and glycine and valine rich protein [Mycobacterium tuberculosis GM 1503] Length=247 Score = 399 bits (1025), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD Sbjct 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL Sbjct 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET Sbjct 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQ 221 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQ Sbjct 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQ 221 >gi|289751349|ref|ZP_06510727.1| conserved alanine, glycine and valine rich protein [Mycobacterium tuberculosis T92] gi|289691936|gb|EFD59365.1| conserved alanine, glycine and valine rich protein [Mycobacterium tuberculosis T92] Length=185 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 184/185 (99%), Positives = 185/185 (100%), Gaps = 0/185 (0%) Query 75 VLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRK 134 +LIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRK Sbjct 1 MLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRK 60 Query 135 DSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALAD 194 DSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALAD Sbjct 61 DSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALAD 120 Query 195 TVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGVARRGAQGSAMQQLR 254 TVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGVARRGAQGSAMQQLR Sbjct 121 TVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAGVARRGAQGSAMQQLR 180 Query 255 STTGG 259 STTGG Sbjct 181 STTGG 185 >gi|15827499|ref|NP_301762.1| hypothetical protein ML1029 [Mycobacterium leprae TN] gi|221229976|ref|YP_002503392.1| hypothetical protein MLBr_01029 [Mycobacterium leprae Br4923] gi|699171|gb|AAA62936.1| u1764k [Mycobacterium leprae] gi|13093049|emb|CAC31410.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933083|emb|CAR71124.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=273 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 185/262 (71%), Positives = 210/262 (81%), Gaps = 14/262 (5%) Query 3 FGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFDDP 62 FG+RTGKDG R +PAD PE T + AA+ E+ +EL+GPFDIDDF+DP Sbjct 21 FGKRTGKDGASRTL----TEPAD----PEATEL-PAASEPDSEEVDELEGPFDIDDFEDP 71 Query 63 SVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWR 122 +VAVLARLDLGSVLIP+P Q+QVELT+ GVP+AVWV+T NGR++I AYAAPKTGGLWR Sbjct 72 AVAVLARLDLGSVLIPLPEGSQLQVELTDVGVPNAVWVVTANGRFTITAYAAPKTGGLWR 131 Query 123 EVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVD 182 EVAGELADSLR DSAKV++KDGPWGREV+G GVVRFIGVDGYRWMIRCVVNGP ET+D Sbjct 132 EVAGELADSLRNDSAKVTVKDGPWGREVVGTNTGVVRFIGVDGYRWMIRCVVNGPLETID 191 Query 183 ALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQ-----ADTQRQAA 237 L+EEAR ALADTVVRRGDTPLPVRTPLPV LPE MA QLREAA AQ AD ++Q+ Sbjct 192 VLSEEARAALADTVVRRGDTPLPVRTPLPVQLPEQMAEQLREAAVAQQSAQHADARQQSR 251 Query 238 AGVARRGAQGSAMQQLRSTTGG 259 RRGA GSAMQQL +TTGG Sbjct 252 ELAPRRGAAGSAMQQLHNTTGG 273 >gi|183982032|ref|YP_001850323.1| hypothetical protein MMAR_2018 [Mycobacterium marinum M] gi|183175358|gb|ACC40468.1| conserved hypothetical protein [Mycobacterium marinum M] Length=247 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 188/260 (73%), Positives = 209/260 (81%), Gaps = 14/260 (5%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFGRRT K + +PV+P R V AA D +L GPFDI+DFD Sbjct 1 MAFGRRTRKG----DSSGSPVEPDGPAARE----VGEPAA-----DDVDLVGPFDIEDFD 47 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DPSVA LARLDLGSVL+PMP GQVQVELTESGVPSAVWV+T NGR++IAAYAAPK+ GL Sbjct 48 DPSVAQLARLDLGSVLVPMPEGGQVQVELTESGVPSAVWVVTANGRFTIAAYAAPKSAGL 107 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVA ELADSLRKDSA+VSIKDGPWGREVIG A+GVVRFIGVDGYRWM+RCVVNGP ET Sbjct 108 WREVASELADSLRKDSAEVSIKDGPWGREVIGTASGVVRFIGVDGYRWMVRCVVNGPHET 167 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADT-QRQAAAG 239 +D LT+EAREALADTV+RRGDTPLPVRTPLPV LPEPM QLR+AAAAQ + Q++ Sbjct 168 IDTLTDEAREALADTVIRRGDTPLPVRTPLPVQLPEPMVEQLRQAAAAQHEQGQQEPDQP 227 Query 240 VARRGAQGSAMQQLRSTTGG 259 RRGA+GSAMQQLRSTTGG Sbjct 228 APRRGAEGSAMQQLRSTTGG 247 >gi|240169702|ref|ZP_04748361.1| hypothetical protein MkanA1_10342 [Mycobacterium kansasii ATCC 12478] Length=251 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 193/262 (74%), Positives = 209/262 (80%), Gaps = 14/262 (5%) Query 1 MAFGRRT-GKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDF 59 MAFGRRT KD G A A A +D +EL GPFDI+DF Sbjct 1 MAFGRRTRNKDRGSSSAEPE-----------APAAAAPKAPELADDDGDELVGPFDIEDF 49 Query 60 DDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGG 119 +DPSVA LARLDLGSVLIPMP AGQVQVELTE+GVPSAVW++TPNGR++IAAYAAPK+ G Sbjct 50 EDPSVAELARLDLGSVLIPMPTAGQVQVELTENGVPSAVWIVTPNGRFTIAAYAAPKSAG 109 Query 120 LWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQE 179 LWREVAGELADSLRKDSA+VSIKDGPWGREVIG A+GVVRFIGVDGYRWMIRCVVNGP E Sbjct 110 LWREVAGELADSLRKDSAQVSIKDGPWGREVIGTASGVVRFIGVDGYRWMIRCVVNGPHE 169 Query 180 TVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAG 239 T+DALT+EAREALADTVVRRGDTPLPVRTPLPV LPEPM QLREAAAAQA Q Q + Sbjct 170 TIDALTDEAREALADTVVRRGDTPLPVRTPLPVQLPEPMVEQLREAAAAQAQAQEQQQSN 229 Query 240 --VARRGAQGSAMQQLRSTTGG 259 ARRGA GSAMQQLRS+T G Sbjct 230 PPAARRGAGGSAMQQLRSSTSG 251 >gi|118618659|ref|YP_906991.1| hypothetical protein MUL_3334 [Mycobacterium ulcerans Agy99] gi|118570769|gb|ABL05520.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=250 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 186/263 (71%), Positives = 206/263 (79%), Gaps = 17/263 (6%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFGRRT K + +PV+P R V AA D +L GPFDI+DFD Sbjct 1 MAFGRRTRKG----DSSGSPVEPDGPAARE----VGEPAA-----DDVDLVGPFDIEDFD 47 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DPSVA LARLDLGSVL+PMP GQVQVELTESGVPSAVWV+T NGR++IAAYAAPK+ GL Sbjct 48 DPSVAQLARLDLGSVLVPMPEGGQVQVELTESGVPSAVWVVTANGRFTIAAYAAPKSAGL 107 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVA ELADSLRKDSA+VSIKDG WGREVIG A+GVVRFIGVDGYRWM+RCVVNGP ET Sbjct 108 WREVASELADSLRKDSAEVSIKDGLWGREVIGTASGVVRFIGVDGYRWMVRCVVNGPHET 167 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAA----QADTQRQA 236 +D LT+EAREALADTV+RRGDTPLPVRTPLPV LPEPM QLR+AAA Q++ Sbjct 168 IDTLTDEAREALADTVIRRGDTPLPVRTPLPVQLPEPMVEQLRQAAATQHEQGQQGQQEP 227 Query 237 AAGVARRGAQGSAMQQLRSTTGG 259 V RRGA+GSAMQQLRSTTGG Sbjct 228 DQPVPRRGAEGSAMQQLRSTTGG 250 >gi|342858437|ref|ZP_08715092.1| hypothetical protein MCOL_06166 [Mycobacterium colombiense CECT 3035] gi|342134141|gb|EGT87321.1| hypothetical protein MCOL_06166 [Mycobacterium colombiense CECT 3035] Length=256 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 183/270 (68%), Positives = 203/270 (76%), Gaps = 30/270 (11%) Query 3 FGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVED--QEELQGPFDIDDFD 60 FG+RT KD DT VA + ED EEL+GPFDI+DFD Sbjct 4 FGKRTPKDDDA-----------------SDTPVAGEVSTRDAEDPAAEELEGPFDIEDFD 46 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DP+VA LARLDLGSVLIPMP AGQ+QVELTE+GVPSAVWV+TPNGR++IAAYAAPKTGGL Sbjct 47 DPAVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTPNGRFTIAAYAAPKTGGL 106 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVA ELA+SLR DSA+VSIKDGPWGREV+G A+GVVRFIGVDGYRWMIRCV+NGP ET Sbjct 107 WREVAAELAESLRNDSAQVSIKDGPWGREVVGTASGVVRFIGVDGYRWMIRCVINGPHET 166 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADT-------- 232 ++AL +EAR ALADTVVRRGDTPLPVRTPL V LPEPMA QLREAAAAQ Sbjct 167 MEALEQEARAALADTVVRRGDTPLPVRTPLTVQLPEPMAQQLREAAAAQQAAQQGDAQQA 226 Query 233 ---QRQAAAGVARRGAQGSAMQQLRSTTGG 259 Q + ARR GSAMQQLR+TTGG Sbjct 227 EGQQAPPSEPAARRSVDGSAMQQLRTTTGG 256 >gi|254821643|ref|ZP_05226644.1| hypothetical protein MintA_17037 [Mycobacterium intracellulare ATCC 13950] Length=257 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 174/223 (79%), Positives = 190/223 (86%), Gaps = 11/223 (4%) Query 48 EELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 EEL+GPFDI+DFDDP+VA LARLDLGSVLIPMP AGQ+QVELTE+GVPSAVWV+TPNGR+ Sbjct 35 EELEGPFDIEDFDDPAVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTPNGRF 94 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYR 167 +IAAYAAPKTGGLWREVAGELA+SLR DSA+VSIKDGPWGREV+G A GVVRFIGVDGYR Sbjct 95 TIAAYAAPKTGGLWREVAGELAESLRNDSAQVSIKDGPWGREVVGTATGVVRFIGVDGYR 154 Query 168 WMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAA 227 WMIRCV+NG ET++AL +EAR ALADTVVRRGDTPLPVRTPL V LPEPMA QLREAAA Sbjct 155 WMIRCVINGAHETMEALEQEARAALADTVVRRGDTPLPVRTPLAVQLPEPMAQQLREAAA 214 Query 228 AQA-----------DTQRQAAAGVARRGAQGSAMQQLRSTTGG 259 AQ D Q A ARR A GSAMQQLR+TTGG Sbjct 215 AQQAAQLADAQQSEDQQAPADQPAARRSADGSAMQQLRTTTGG 257 >gi|108799159|ref|YP_639356.1| hypothetical protein Mmcs_2192 [Mycobacterium sp. MCS] gi|119868274|ref|YP_938226.1| hypothetical protein Mkms_2238 [Mycobacterium sp. KMS] gi|126434767|ref|YP_001070458.1| hypothetical protein Mjls_2181 [Mycobacterium sp. JLS] gi|108769578|gb|ABG08300.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119694363|gb|ABL91436.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126234567|gb|ABN97967.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=251 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 175/268 (66%), Positives = 195/268 (73%), Gaps = 26/268 (9%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFG+R K GK G QP E V V A +E+L+GPFDI+DFD Sbjct 1 MAFGKR--KSSGK--IGEPATQPTPEPV------VEPAG-------EEDLEGPFDIEDFD 43 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DP VA RLDLGSVL+PMPAAGQVQVEL E+GVPSAVWV+TPNGR++IAAYAAPK+ GL Sbjct 44 DPEVAAQGRLDLGSVLVPMPAAGQVQVELNEAGVPSAVWVVTPNGRFTIAAYAAPKSAGL 103 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQET 180 WREVAGELADSLRKD A VSI+DGPWGREV+G A G+VRFIGVDGYRWMIRCVVNG E+ Sbjct 104 WREVAGELADSLRKDGAAVSIQDGPWGREVVGTATGMVRFIGVDGYRWMIRCVVNGVAES 163 Query 181 VDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPM---------AAQLREAAAAQAD 231 ++ALT EAREAL DTVVRRGDTPLPVRTPL V LPEPM A Q ++ QA Sbjct 164 IEALTREAREALRDTVVRRGDTPLPVRTPLAVQLPEPMAAQLRAAAAAQQGQQPDQQQAP 223 Query 232 TQRQAAAGVARRGAQGSAMQQLRSTTGG 259 ARR AQGSAMQQLR+ TGG Sbjct 224 PPPPPPEPAARRSAQGSAMQQLRTITGG 251 >gi|333991078|ref|YP_004523692.1| hypothetical protein JDM601_2438 [Mycobacterium sp. JDM601] gi|333487046|gb|AEF36438.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=265 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 167/279 (60%), Positives = 195/279 (70%), Gaps = 35/279 (12%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQ-EELQGPFDIDDF 59 MAFGR K GG +PA E + D ED EEL+GPFDI+DF Sbjct 2 MAFGRGKSKVGGDEPTR---AEPAPEELEDLD------------EDAGEELEGPFDIEDF 46 Query 60 DDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGG 119 DDP+ A ARLDLGSVL+PMPA QVQVEL+E+GVPSAVW++TPNGR++IAAYAAPK+ G Sbjct 47 DDPAAAATARLDLGSVLVPMPAGAQVQVELSEAGVPSAVWMVTPNGRFNIAAYAAPKSAG 106 Query 120 LWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQE 179 LWREVA ELA++LR+DSA VS+ DGPWGREV+G AAG VRFIGVDGYRWM+RCVVNGP E Sbjct 107 LWREVAAELAEALRRDSASVSVIDGPWGREVVGSAAGAVRFIGVDGYRWMVRCVVNGPHE 166 Query 180 TVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL----------------- 222 +++AL+++AR+ALADTVVRRGDTPLPVRTPLPV LPEPMA QL Sbjct 167 SLEALSQQARDALADTVVRRGDTPLPVRTPLPVRLPEPMAEQLRAAAAAQAARGAAPGGG 226 Query 223 --REAAAAQADTQRQAAAGVARRGAQGSAMQQLRSTTGG 259 A ARR A+GSAMQQLR+ TGG Sbjct 227 QQPGGVQPGPGGDVPPPAPTARRSAEGSAMQQLRTITGG 265 >gi|296171859|ref|ZP_06852958.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893943|gb|EFG73712.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=257 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 163/202 (81%), Positives = 176/202 (88%), Gaps = 5/202 (2%) Query 63 SVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWR 122 SVA LARLDLGSVLIPMP AGQ+QVELTE+GVPSA+WV+TPNGR++IAAYAAPKTGGLWR Sbjct 56 SVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAIWVVTPNGRFTIAAYAAPKTGGLWR 115 Query 123 EVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVD 182 EVAGELADSLRKDSAKVSIKDGPWGREV+G A+G VRFIGVDGYRWMIRCV+NGP ET++ Sbjct 116 EVAGELADSLRKDSAKVSIKDGPWGREVVGSASGAVRFIGVDGYRWMIRCVINGPHETME 175 Query 183 ALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQ-----AA 237 AL +EAR ALADTVVRRGDTPLPVRTPL V LPEPMA QLREAAAAQ Q A Sbjct 176 ALEQEARAALADTVVRRGDTPLPVRTPLTVQLPEPMAQQLREAAAAQQAQQHDEAQQGAN 235 Query 238 AGVARRGAQGSAMQQLRSTTGG 259 ARR A GSAMQQLR+TTGG Sbjct 236 EPAARRSADGSAMQQLRTTTGG 257 >gi|41408911|ref|NP_961747.1| hypothetical protein MAP2813c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397270|gb|AAS05130.1| hypothetical protein MAP_2813c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458808|gb|EGO37765.1| Protein of unknown function (DUF3710) [Mycobacterium avium subsp. paratuberculosis S397] Length=257 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 174/219 (80%), Positives = 191/219 (88%), Gaps = 7/219 (3%) Query 48 EELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 +EL+GPFDIDDFDDP+VA LARLDLGSVLIPMP AGQ+QVELTE+GVPSAVWV+T NGR+ Sbjct 39 DELEGPFDIDDFDDPAVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTANGRF 98 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYR 167 +IAAYAAPKTGGLWREVA ELA+SLR DSAKVSI+DGPWGREV+G AAGVVRFIGVDGYR Sbjct 99 TIAAYAAPKTGGLWREVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYR 158 Query 168 WMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAA 227 WMIRCVVNG ET++AL +EAR ALADTVVRRGDTPLPVRTPLPV LPEPMA QLREAAA Sbjct 159 WMIRCVVNGTHETMEALEQEARAALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAA 218 Query 228 AQADTQRQAAAG-------VARRGAQGSAMQQLRSTTGG 259 AQ +QA + ARR A GSAMQQLR+TTGG Sbjct 219 AQQAAAQQAQSQQSPGNEPAARRSADGSAMQQLRTTTGG 257 >gi|118463014|ref|YP_882765.1| hypothetical protein MAV_3588 [Mycobacterium avium 104] gi|118164301|gb|ABK65198.1| conserved hypothetical protein [Mycobacterium avium 104] Length=258 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 186/264 (71%), Positives = 204/264 (78%), Gaps = 16/264 (6%) Query 3 FGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFDDP 62 FGRR + G P + D VVA A D EL+GPFDIDDFDDP Sbjct 4 FGRRA-------RRGDDEDTPVGAEIPEPDPVVAHDDADEQAAD--ELEGPFDIDDFDDP 54 Query 63 SVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWR 122 +VA LARLDLGSVLIPMP AGQ+QVELTE+GVPSAVWV+T NGR++IAAYAAPKTGGLWR Sbjct 55 AVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTANGRFTIAAYAAPKTGGLWR 114 Query 123 EVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYRWMIRCVVNGPQETVD 182 EVA ELA+SLR DSAKVSI+DGPWGREV+G AAGVVRFIGVDGYRWMIRCVVNG ET++ Sbjct 115 EVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWMIRCVVNGTHETME 174 Query 183 ALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADTQRQAAAG--- 239 AL +EAR ALADTVVRRGDTPLPVRTPLPV LPEPMA QLREAAAAQ +QA + Sbjct 175 ALEQEARAALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSP 234 Query 240 ----VARRGAQGSAMQQLRSTTGG 259 ARR A GSAMQQLR+TTGG Sbjct 235 GNEPAARRSADGSAMQQLRTTTGG 258 >gi|315444844|ref|YP_004077723.1| hypothetical protein Mspyr1_32770 [Mycobacterium sp. Spyr1] gi|315263147|gb|ADT99888.1| hypothetical protein Mspyr1_32770 [Mycobacterium sp. Spyr1] Length=255 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 167/235 (72%), Positives = 184/235 (79%), Gaps = 21/235 (8%) Query 46 DQEELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNG 105 D EEL+GPFDIDDFDDP+VA +ARLDLGSVLIPMP AGQVQVEL E+G PSAVWV+TPNG Sbjct 21 DDEELEGPFDIDDFDDPAVAAVARLDLGSVLIPMPDAGQVQVELNEAGTPSAVWVVTPNG 80 Query 106 RYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGI---AAGVVRFIG 162 R++IAAYAAPK+ GLWREVA ELADSLRKD+ KVSI+DGPWGREV+G A +VRFIG Sbjct 81 RFTIAAYAAPKSAGLWREVASELADSLRKDAPKVSIEDGPWGREVVGSGGEGAAMVRFIG 140 Query 163 VDGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL 222 VDGYRWMIRCVVNGP E + LTE+AR+ALADTVVRRGDTPLPVRTPLPV LPEPMAAQL Sbjct 141 VDGYRWMIRCVVNGPFERIAELTEQARDALADTVVRRGDTPLPVRTPLPVTLPEPMAAQL 200 Query 223 REAAAAQADTQRQAAAGV------------------ARRGAQGSAMQQLRSTTGG 259 A A Q+QAA ARR A GSAMQQLR+ TGG Sbjct 201 AAAQQQAAAQQQQAATEQQPPAQQQPPAQQEPPQPNARRSAPGSAMQQLRTITGG 255 >gi|145224513|ref|YP_001135191.1| hypothetical protein Mflv_3932 [Mycobacterium gilvum PYR-GCK] gi|145216999|gb|ABP46403.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=255 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 167/235 (72%), Positives = 184/235 (79%), Gaps = 21/235 (8%) Query 46 DQEELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNG 105 D EEL+GPFDIDDFDDP+VA +ARLDLGSVLIPMP AGQVQVEL E+G PSAVWV+TPNG Sbjct 21 DDEELEGPFDIDDFDDPAVAAVARLDLGSVLIPMPDAGQVQVELNEAGAPSAVWVVTPNG 80 Query 106 RYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGI---AAGVVRFIG 162 R++IAAYAAPK+ GLWREVA ELADSLRKD+ KVSI+DGPWGREV+G A +VRFIG Sbjct 81 RFTIAAYAAPKSAGLWREVASELADSLRKDAPKVSIEDGPWGREVVGSGGEGAAMVRFIG 140 Query 163 VDGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL 222 VDGYRWMIRCVVNGP E + LTE+AR+ALADTVVRRGDTPLPVRTPLPV LPEPMAAQL Sbjct 141 VDGYRWMIRCVVNGPFERIAELTEQARDALADTVVRRGDTPLPVRTPLPVTLPEPMAAQL 200 Query 223 REAAAAQADTQRQAAAGV------------------ARRGAQGSAMQQLRSTTGG 259 A A Q+QAA ARR A GSAMQQLR+ TGG Sbjct 201 AAAQQQAAAQQQQAATEQQPPAQQQPPAQQEPPQPNARRSAPGSAMQQLRTITGG 255 >gi|118473654|ref|YP_887097.1| hypothetical protein MSMEG_2766 [Mycobacterium smegmatis str. MC2 155] gi|118174941|gb|ABK75837.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=264 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 160/275 (59%), Positives = 183/275 (67%), Gaps = 28/275 (10%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MAFG+R ++ G PV ++ + E+LQGPFDI+DFD Sbjct 2 MAFGKRKKSAADDKRTGDQPVAAHAAPSAADE------------QPDEDLQGPFDIEDFD 49 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 DP+VA RLDLGSVLIPMP GQVQVEL E+G PSAVWV+TPNGR++IAAYAAPKT GL Sbjct 50 DPAVAAQGRLDLGSVLIPMPDGGQVQVELNEAGAPSAVWVVTPNGRFTIAAYAAPKTAGL 109 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGRE-VIGIAAGVVRFIGVDGYRWMIRCVVNGPQE 179 WREVA ELA+SLRKD+ VS++DGPWGRE V GVVRFIGVDGYRWM+RCVVNG E Sbjct 110 WREVASELAESLRKDATSVSVQDGPWGREVVGAGNGGVVRFIGVDGYRWMVRCVVNGVPE 169 Query 180 TVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPM---------------AAQLRE 224 TVDAL EAR AL D V+RRGDTP+PVRTPLP+ LPEPM + Sbjct 170 TVDALAAEARAALTDAVIRRGDTPMPVRTPLPIQLPEPMAAQLRAAAAAQAAAQQNPAAQ 229 Query 225 AAAAQADTQRQAAAGVARRGAQGSAMQQLRSTTGG 259 Q Q Q VARR AQGSAMQQLR+ TGG Sbjct 230 QPQQQEGEQPQPPEPVARRSAQGSAMQQLRTITGG 264 >gi|120403458|ref|YP_953287.1| hypothetical protein Mvan_2468 [Mycobacterium vanbaalenii PYR-1] gi|119956276|gb|ABM13281.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=243 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 164/238 (69%), Positives = 179/238 (76%), Gaps = 26/238 (10%) Query 48 EELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 EEL+GPFDIDDFDDPSVA LARLDLGSVLIPMP AGQVQVEL E+G PSAVWV+TP+GR+ Sbjct 6 EELEGPFDIDDFDDPSVAALARLDLGSVLIPMPEAGQVQVELNETGAPSAVWVVTPDGRF 65 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIA---AGVVRFIGVD 164 +IAAYAAPK+ GLWREVA ELADSLRKD+ KVSI+DGPWGREV+G A A VVRFIGVD Sbjct 66 TIAAYAAPKSAGLWREVASELADSLRKDAPKVSIEDGPWGREVVGSAGEGAAVVRFIGVD 125 Query 165 GYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLRE 224 GYRWM+RCVVNGP E + L E+AR ALADTVVRRGDTPLPVRTPLPV LPEPMAAQL Sbjct 126 GYRWMVRCVVNGPYERMAELAEQARNALADTVVRRGDTPLPVRTPLPVQLPEPMAAQLAA 185 Query 225 AAAAQADTQRQAAAGV-----------------------ARRGAQGSAMQQLRSTTGG 259 A Q+ AA ARR GSAMQQLR+ TGG Sbjct 186 AQQQAVAQQQAAAQQQQAPAQQQAPEQPAPAQQEPPQPNARRSTMGSAMQQLRTITGG 243 >gi|169630085|ref|YP_001703734.1| hypothetical protein MAB_3002c [Mycobacterium abscessus ATCC 19977] gi|169242052|emb|CAM63080.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=245 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/225 (65%), Positives = 169/225 (76%), Gaps = 13/225 (5%) Query 48 EELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 E GP++I+DFD P A + RLDLGSVLIP+P GQ+QVELT +G P AV+V+TPNGRY Sbjct 21 ETFDGPYEIEDFDSPEDAGVGRLDLGSVLIPVPETGQIQVELTAAGAPGAVFVLTPNGRY 80 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIA-AGVVRFIGVDGY 166 S+AAYAAPK+ GLWRE+AGELA+SLRK++A+VSI DGPWGREV+G A G VRFIGVDGY Sbjct 81 SVAAYAAPKSAGLWREIAGELAESLRKEAAEVSIADGPWGREVVGAAQGGSVRFIGVDGY 140 Query 167 RWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAA 226 RWMIRCV+ GP ET DAL +EAREA+ADTVVRR D+P PVRTPLPV LPEPM QL++A Sbjct 141 RWMIRCVLQGPAETFDALADEAREAVADTVVRRDDSPYPVRTPLPVVLPEPMLEQLQQAQ 200 Query 227 AAQADTQRQAAAG-----------VARRGAQGSAMQQLRST-TGG 259 A A ARR GSAMQQLRST TGG Sbjct 201 AQAMAQAEAEAPAQEPAPQDDPTPAARRSVAGSAMQQLRSTITGG 245 >gi|254776028|ref|ZP_05217544.1| hypothetical protein MaviaA2_15350 [Mycobacterium avium subsp. avium ATCC 25291] Length=195 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 132/156 (85%), Positives = 146/156 (94%), Gaps = 0/156 (0%) Query 48 EELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 +EL+GPFDIDDFDDP+VA LARLDLGSVLIPMP AGQ+QVELTE+GVPSAVWV+T NGR+ Sbjct 40 DELEGPFDIDDFDDPAVAELARLDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTANGRF 99 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGVVRFIGVDGYR 167 +IAAYAAPKTGGLWREVA ELA+SLR DSAKVSI+DGPWGREV+G AAGVVRFIGVDGYR Sbjct 100 TIAAYAAPKTGGLWREVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYR 159 Query 168 WMIRCVVNGPQETVDALTEEAREALADTVVRRGDTP 203 WMIRCVVNG ET++AL +EAR ALADTVVRRGDTP Sbjct 160 WMIRCVVNGTHETMEALEQEARAALADTVVRRGDTP 195 >gi|229491247|ref|ZP_04385073.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321786|gb|EEN87581.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=279 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/188 (55%), Positives = 132/188 (71%), Gaps = 7/188 (3%) Query 42 SGVEDQEELQGPFDID--DFDDPSVAVLA-RLDLGSVLIPMPAAGQVQVELTESGVPSAV 98 +G E +E +GP+DI D DDP+ RLDLGSVL+PMP GQ+QVE+ +G P AV Sbjct 38 TGDEFGDESEGPYDISEIDSDDPTAGRDGQRLDLGSVLVPMPTGGQLQVEMAPNGSPQAV 97 Query 99 WVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV- 157 ++T +GR ++AAYAAPK+ G WREV ELA SLR D++ VS+++GPWGRE+ + A + Sbjct 98 HLVTEHGRITVAAYAAPKSPGQWREVVAELAQSLRDDNSAVSVENGPWGRELAAVTANMD 157 Query 158 VRFIGVDGYRWMIRCVVNGPQETVDA---LTEEAREALADTVVRRGDTPLPVRTPLPVHL 214 +RFIGVDG RWM+RCVV GP + A L AR+ L DTVV RG P PVRTPLPV L Sbjct 158 LRFIGVDGPRWMVRCVVAGPSGSTAANAPLVAIARDILRDTVVNRGSEPHPVRTPLPVVL 217 Query 215 PEPMAAQL 222 P+ +A QL Sbjct 218 PQVLAEQL 225 >gi|226306310|ref|YP_002766270.1| hypothetical protein RER_28230 [Rhodococcus erythropolis PR4] gi|226185427|dbj|BAH33531.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=280 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 102/188 (55%), Positives = 131/188 (70%), Gaps = 7/188 (3%) Query 42 SGVEDQEELQGPFDID--DFDDPSVAVLA-RLDLGSVLIPMPAAGQVQVELTESGVPSAV 98 +G E +E +GP+DI D DDP+ RLDLGSVL+PMP GQ+QVE+ +G P AV Sbjct 38 AGDEFGDESEGPYDITEIDSDDPTAGRDGQRLDLGSVLVPMPTGGQLQVEMAPNGSPQAV 97 Query 99 WVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV- 157 ++T +GR ++AAYAAPK+ G WREV ELA SLR D++ VS+++GPWGRE+ + A + Sbjct 98 HLVTEHGRITVAAYAAPKSPGQWREVVAELAQSLRDDNSAVSVENGPWGRELAAVTANMD 157 Query 158 VRFIGVDGYRWMIRCVVNGPQETVDA---LTEEAREALADTVVRRGDTPLPVRTPLPVHL 214 +RFIG DG RWM+RCVV GP + A L AR+ L DTVV RG P PVRTPLPV L Sbjct 158 LRFIGADGPRWMVRCVVAGPSGSTAANTPLVAIARDILRDTVVNRGSEPHPVRTPLPVVL 217 Query 215 PEPMAAQL 222 P+ +A QL Sbjct 218 PQVLAEQL 225 >gi|226366224|ref|YP_002784007.1| hypothetical protein ROP_68150 [Rhodococcus opacus B4] gi|226244714|dbj|BAH55062.1| hypothetical protein [Rhodococcus opacus B4] Length=279 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/172 (57%), Positives = 121/172 (71%), Gaps = 8/172 (4%) Query 52 GPFDIDDFDDPSVAVL----ARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 GP+D DD + + + RLDLGSVL+PMP Q+QVE+ G P AV ++T +GR Sbjct 45 GPYDADDLESGADLTVGEAGTRLDLGSVLVPMPQGAQLQVEMAPDGSPQAVHLVTQHGRI 104 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGY 166 ++AAYAAPK+ G WREVAG+LA+SLR D+A VS++ GPWGREV + +RFIGVDGY Sbjct 105 TVAAYAAPKSPGQWREVAGDLAESLRNDNATVSVESGPWGREVFAVTPNADLRFIGVDGY 164 Query 167 RWMIRCVVNGPQ--ETVDA-LTEEAREALADTVVRRGDTPLPVRTPLPVHLP 215 RWM+RCVV GP T D+ L AR L DTVV+RG+ P PVRTPLPV LP Sbjct 165 RWMVRCVVAGPSGGNTADSELVATARAILRDTVVKRGNEPNPVRTPLPVVLP 216 >gi|111023788|ref|YP_706760.1| hypothetical protein RHA1_ro06830 [Rhodococcus jostii RHA1] gi|110823318|gb|ABG98602.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=276 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/169 (58%), Positives = 120/169 (72%), Gaps = 8/169 (4%) Query 52 GPFDIDDFD---DPSVA-VLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 GP+D DD + D +V V RLDLGSVL+PMP Q+QVE+ G P AV ++T GR Sbjct 43 GPYDADDLESGADLTVGEVGTRLDLGSVLVPMPQGAQLQVEMAPDGSPQAVHLVTQQGRI 102 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGY 166 ++AAYAAPK+ G WREVAG+LA+SLR D+A VS++ GPWGREV + +RFIGVDGY Sbjct 103 TVAAYAAPKSPGQWREVAGDLAESLRNDNATVSVESGPWGREVFAVTPNADLRFIGVDGY 162 Query 167 RWMIRCVVNGPQ--ETVDA-LTEEAREALADTVVRRGDTPLPVRTPLPV 212 RWM+RCVV GP T D+ L AR L DTVV+RG+ P PVRTPLPV Sbjct 163 RWMVRCVVAGPSGGNTADSELVATARAILRDTVVKRGNEPHPVRTPLPV 211 >gi|325672671|ref|ZP_08152367.1| hypothetical protein HMPREF0724_10148 [Rhodococcus equi ATCC 33707] gi|325556548|gb|EGD26214.1| hypothetical protein HMPREF0724_10148 [Rhodococcus equi ATCC 33707] Length=271 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 121/276 (44%), Positives = 155/276 (57%), Gaps = 33/276 (11%) Query 3 FGRRTGKDGGKRKAGHAPVQ--PADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 FGRR K+ A APV+ P D+ + ED + A G D GP+D+ + Sbjct 2 FGRRKKKEA--EHADTAPVEATPVDQDM--EDAAESELDAPVGALDG----GPYDVSELG 53 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 + RLDLGSV +PMP Q+QVE++ G P V ++T GR +++AYAAPK+ G Sbjct 54 EGEEPAATRLDLGSVFLPMPEGAQLQVEMSPEGAPQNVHLVTQYGRITVSAYAAPKSPGQ 113 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWMIRCVVNGPQE 179 WREVA ELA+SLR D+A VSI+ GPWGREV +RFIGVDG RWM+RCVV GP Sbjct 114 WREVASELAESLRADNADVSIESGPWGREVAAATPNADLRFIGVDGPRWMVRCVVAGPSG 173 Query 180 TVDA---LTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREAAAAQADT---- 232 V + L AR L +TV+ RG+ P PVRTPLP+ LP+ + QL+ A A Q Sbjct 174 AVVSDGPLVATARAVLLNTVIARGNDPHPVRTPLPIVLPQVLVEQLQAAHAQQLAAQQQA 233 Query 233 -----------QRQAAAGVA----RRGAQGSAMQQL 253 +Q +G RRG GSAMQQL Sbjct 234 AQEQAQATAGQSQQPPSGNGSEPPRRGESGSAMQQL 269 >gi|312139441|ref|YP_004006777.1| hypothetical protein REQ_20340 [Rhodococcus equi 103S] gi|311888780|emb|CBH48092.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=271 Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 104/220 (48%), Positives = 134/220 (61%), Gaps = 14/220 (6%) Query 3 FGRRTGKDGGKRKAGHAPVQ--PADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 FGRR K+ A APV+ P D+ + ED + A G D GP+D+ + Sbjct 2 FGRRKKKEA--EHADTAPVEATPVDQDM--EDAAESELDAPVGALDG----GPYDVSELG 53 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 + RLDLGSV +PMP Q+QVE++ G P V ++T GR +++AYAAPK+ G Sbjct 54 EGEEPAATRLDLGSVFLPMPEGAQLQVEMSPEGAPQNVHLVTQYGRITVSAYAAPKSPGQ 113 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWMIRCVVNGPQE 179 WREVA ELA+SLR D+A VSI+ GPWGREV +RFIGVDG RWM+RCVV GP Sbjct 114 WREVASELAESLRADNADVSIESGPWGREVAAATPNADLRFIGVDGPRWMVRCVVAGPSG 173 Query 180 TVDA---LTEEAREALADTVVRRGDTPLPVRTPLPVHLPE 216 V + L AR L +TV+ RG+ P PVRTPLP+ LP+ Sbjct 174 AVVSDGPLVATARAVLLNTVIARGNDPHPVRTPLPIVLPQ 213 >gi|326384431|ref|ZP_08206111.1| hypothetical protein SCNU_15904 [Gordonia neofelifaecis NRRL B-59395] gi|326196776|gb|EGD53970.1| hypothetical protein SCNU_15904 [Gordonia neofelifaecis NRRL B-59395] Length=305 Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 93/171 (55%), Positives = 122/171 (72%), Gaps = 4/171 (2%) Query 52 GPFDIDDFDDPSVAVLA--RLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSI 109 GP+DI D P +A LA LDLGS+L+P+ GQV VE++ + P AV+++TP GR + Sbjct 12 GPYDIADLATP-LAELANSHLDLGSILMPVVEGGQVTVEMSATHEPEAVYLVTPVGRIGL 70 Query 110 AAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG-IAAGVVRFIGVDGYRW 168 A+AAP++GGLWREV ELA+SLR D A+ SI+DG WGREV+ +A G RFIGVDG RW Sbjct 71 HAFAAPRSGGLWREVVRELAESLRSDGAQTSIEDGHWGREVLARVAGGSHRFIGVDGTRW 130 Query 169 MIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMA 219 M+RCV +GP+E+ L + AR LA+TVVRRG+ P P R LP+ LP +A Sbjct 131 MVRCVASGPEESEVQLAQLARAVLAETVVRRGNEPYPPRELLPIVLPPVLA 181 >gi|54025722|ref|YP_119964.1| hypothetical protein nfa37520 [Nocardia farcinica IFM 10152] gi|54017230|dbj|BAD58600.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=299 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/229 (49%), Positives = 141/229 (62%), Gaps = 22/229 (9%) Query 47 QEELQGPFDIDDFDDPSVAVL-ARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNG 105 + E +GP+D D+ + V RLDLGSV++P+P GQ+QVE+T G P AV + T +G Sbjct 68 EPERRGPYDYDEVAELLADVADQRLDLGSVILPVPPGGQLQVEMTPDGAPQAVHLATEHG 127 Query 106 RYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVD 164 R ++AAYAAPK+ G WR VA +LADSLRKD A+VS++ GPWGRE+ + +RFIGVD Sbjct 128 RITVAAYAAPKSPGQWRTVAADLADSLRKDGAQVSVETGPWGRELHAVTPSADLRFIGVD 187 Query 165 GYRWMIRCVVNGPQETVDA---LTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQ 221 GYRWM+R V GP L AR +++TVVRRG PLPVR PLPV LP+ +A Q Sbjct 188 GYRWMVRLVAAGPAGAAADGMPLVTAARAIMSETVVRRGSDPLPVRDPLPVVLPQQLAEQ 247 Query 222 LREAAAAQADTQRQAAAGVA-----------------RRGAQGSAMQQL 253 L A AQ Q+Q A A RRG GSAMQQL Sbjct 248 LAAAHQAQMQAQQQQMAAQAAPPPTPAPTPKPVPQEPRRGVGGSAMQQL 296 >gi|300784514|ref|YP_003764805.1| hypothetical protein AMED_2608 [Amycolatopsis mediterranei U32] gi|299794028|gb|ADJ44403.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340525935|gb|AEK41140.1| hypothetical protein RAM_13250 [Amycolatopsis mediterranei S699] Length=221 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/224 (46%), Positives = 132/224 (59%), Gaps = 17/224 (7%) Query 3 FGRRTGKDGGKRKAGHAPVQPADEHVRPE--DTVVASAAAASGVEDQEELQGPFDIDDFD 60 FGR+ +GG A H PE DT G E + GPFD+ DFD Sbjct 4 FGRKRRTEGGS----------AGRHAAPEADDTFEDEEHDEDGPELSDVSDGPFDVTDFD 53 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELT-ESGVPSAVWVITPNGRYSIAAYAAPKTGG 119 D + R+DLGSV +P+P QVQVE+ E+G AV V+T G+ +++AYAAP++GG Sbjct 54 DDGIP---RIDLGSVKVPVPDGSQVQVEMDPEAGGVRAVHVVTEQGQITVSAYAAPRSGG 110 Query 120 LWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWMIRCVVNGPQ 178 LWREV+ ELAD LR D AKV+I G WG E+ I V +RF+GVD RWM+R V+ GPQ Sbjct 111 LWREVSSELADQLRADGAKVTIGRGVWGLEISAIIGDVALRFVGVDRPRWMLRGVIAGPQ 170 Query 179 ETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL 222 E RE + T+V RGD P+PVRTPL + LPE +A + Sbjct 171 SEAAGAVEVLREIVRRTIVDRGDAPMPVRTPLTITLPEAVAEHI 214 >gi|343924637|ref|ZP_08764181.1| hypothetical protein GOALK_021_00150 [Gordonia alkanivorans NBRC 16433] gi|343765437|dbj|GAA11107.1| hypothetical protein GOALK_021_00150 [Gordonia alkanivorans NBRC 16433] Length=288 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/166 (53%), Positives = 115/166 (70%), Gaps = 2/166 (1%) Query 52 GPFDIDDF-DDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIA 110 GP+DID + S + LDLGSVL+P+ GQV VE++E+ P V+++TP GR S++ Sbjct 16 GPYDIDALATETSELENSHLDLGSVLVPVVEGGQVTVEMSETHQPQNVYLVTPIGRISVS 75 Query 111 AYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG-IAAGVVRFIGVDGYRWM 169 A+AAPK+ G+WREV ELA+SLR A SI+DG WGREV+ + G RFIGVDG RW+ Sbjct 76 AFAAPKSPGMWREVVRELAESLRDGGAATSIEDGHWGREVVAEVEGGTHRFIGVDGPRWL 135 Query 170 IRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLP 215 +RCV +GP E+ + L +R LA+TVVRRG P P R PLP+ LP Sbjct 136 VRCVGSGPSESAEDLARLSRAVLAETVVRRGSEPHPPREPLPIVLP 181 >gi|333919439|ref|YP_004493020.1| hypothetical protein AS9A_1771 [Amycolicicoccus subflavus DQS3-9A1] gi|333481660|gb|AEF40220.1| hypothetical protein AS9A_1771 [Amycolicicoccus subflavus DQS3-9A1] Length=266 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 95/207 (46%), Positives = 129/207 (63%), Gaps = 8/207 (3%) Query 14 RKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFDDPSVAVLARLDLG 73 R+ ++ V P E P +T + S G + + GPFD + + P+ A RLDLG Sbjct 5 RRNKNSEVNPESEA--PPETGI-SEGDVPGSRESDRSNGPFDSGEVEQPA-AGEKRLDLG 60 Query 74 SVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLR 133 + +P+PA QVQVE+ +SG + + T GR ++AAYAAP++ G+WREV+GEL++SLR Sbjct 61 AFSLPLPAGAQVQVEMAKSGGVQGIHLATQFGRITVAAYAAPRSSGMWREVSGELSESLR 120 Query 134 KDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWMIRCVVNGPQET---VDALTEEAR 189 +D A+V+ GPWG EV G+ +RFIGVDG RWMIR V GP L AR Sbjct 121 RDGAEVTTDSGPWGPEVTGVTKSADIRFIGVDGPRWMIRLVAAGPPGAGVHNGDLARTAR 180 Query 190 EALADTVVRRGDTPLPVRTPLPVHLPE 216 E L+ T+V RGD PLPVRTPLP+ LP+ Sbjct 181 EVLSGTIVSRGDAPLPVRTPLPITLPK 207 >gi|302525750|ref|ZP_07278092.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302434645|gb|EFL06461.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=218 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/226 (45%), Positives = 135/226 (60%), Gaps = 19/226 (8%) Query 3 FGR--RTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 FGR R+G D A AD+ + PED + E GPFD+ + + Sbjct 4 FGRKRRSGDDETGGVASERESVEADDALEPEDQL------------SETPDGPFDVTEAE 51 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELT-ESGVPSAVWVITPNGRYSIAAYAAPKTGG 119 + + R+DLGSV +P+P QVQVE+ E G AV V+T G+ +++AYAAPK+GG Sbjct 52 EDGIP---RIDLGSVRVPVPDGSQVQVEMDPEEGGVRAVHVVTEVGQITVSAYAAPKSGG 108 Query 120 LWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWMIRCVVNGPQ 178 LWREV+ ELAD LR D AKV++ G WG E+ I V +RF+GVDG RWM+R V+ GPQ Sbjct 109 LWREVSNELADQLRADGAKVNVGRGEWGMELSAIVGDVALRFVGVDGPRWMLRGVIAGPQ 168 Query 179 ETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLRE 224 T E R + TVV RG++P+PVRTPLP+ LPE +A + E Sbjct 169 STASQAPEVLRAIVRRTVVDRGNSPMPVRTPLPITLPEAVAQHIAE 214 >gi|262202185|ref|YP_003273393.1| hypothetical protein Gbro_2252 [Gordonia bronchialis DSM 43247] gi|262085532|gb|ACY21500.1| hypothetical protein Gbro_2252 [Gordonia bronchialis DSM 43247] Length=305 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/166 (52%), Positives = 111/166 (67%), Gaps = 2/166 (1%) Query 52 GPFDIDDF-DDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIA 110 GP+DI++ DP + LDLGSVL+P+ GQV VE++ P AV+++TP+GR +++ Sbjct 14 GPYDIEELATDPGELENSHLDLGSVLVPVVEGGQVTVEMSADHQPQAVYLVTPHGRITVS 73 Query 111 AYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG-IAAGVVRFIGVDGYRWM 169 A+AAPK+ GLWREV ELA SLR + A I DG WGREVI + FIGVDG RWM Sbjct 74 AFAAPKSPGLWREVVRELAGSLRDEGATTGISDGHWGREVIAEVDDATHLFIGVDGPRWM 133 Query 170 IRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLP 215 +RCV +GP + D + AR LA+TVVRRG P P R PLP+ LP Sbjct 134 VRCVASGPSVSADEMARLARAVLAETVVRRGTEPYPPRDPLPIVLP 179 >gi|257056415|ref|YP_003134247.1| hypothetical protein Svir_24250 [Saccharomonospora viridis DSM 43017] gi|256586287|gb|ACU97420.1| hypothetical protein Svir_24250 [Saccharomonospora viridis DSM 43017] Length=240 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 85/174 (49%), Positives = 117/174 (68%), Gaps = 5/174 (2%) Query 52 GPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTES-GVPSAVWVITPNGRYSIA 110 GP+DI + D + R+DLGSV +P+P QVQVE+ ++ G AV V+TP G+ +++ Sbjct 53 GPYDISEAPDDGIP---RMDLGSVKVPVPNGAQVQVEMDQARGTVRAVHVVTPQGQVTVS 109 Query 111 AYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGVDGYRWM 169 AYAAP++GGLW EV+GELA+ LR D A+VS+ G WG E+ I V +RFIGVDG RW+ Sbjct 110 AYAAPRSGGLWSEVSGELAEQLRSDGARVSLGRGEWGMELSAIVGEVALRFIGVDGPRWL 169 Query 170 IRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLR 223 +R V+ GPQ E RE L T+V RG P+PVRTPL + LPE +A+ ++ Sbjct 170 LRGVIAGPQSEAARAPEVLREILRGTIVDRGHAPMPVRTPLQITLPEAIASHIK 223 >gi|296139594|ref|YP_003646837.1| hypothetical protein Tpau_1885 [Tsukamurella paurometabola DSM 20162] gi|296027728|gb|ADG78498.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=274 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/216 (47%), Positives = 130/216 (61%), Gaps = 5/216 (2%) Query 1 MAFGRRTGKDGGKRKAGHAPVQPADEHVRPEDTVVASAAAASGVEDQEELQGPFDIDDFD 60 MA GRR K G +R A V P +PE + + A + +GP+D+ + Sbjct 1 MALGRR--KSGKQRS--DAGVDPYASIGQPEHHAIPTPAPDEAAQTLGSGEGPYDLALLE 56 Query 61 DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIAAYAAPKTGGL 120 D RLDLGS+++ MP Q+QVE++ G P V + TP GR + +AAPKTGG Sbjct 57 DIEGLEDGRLDLGSLVLAMPPEAQLQVEMSPEGQPVGVHLDTPAGRITPGVFAAPKTGGQ 116 Query 121 WREVAGELADSLRKDSAKVSIKDGPWGREVIGIAA-GVVRFIGVDGYRWMIRCVVNGPQE 179 WREV ELADSLR++ A+V+I+DG WGREV+GI GV+RFIGVDG RWMIR VV P E Sbjct 117 WREVVTELADSLRENGAQVTIEDGHWGREVVGIQPDGVLRFIGVDGPRWMIRFVVAAPAE 176 Query 180 TVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLP 215 + + AR LA+TVVRRG P P R L + LP Sbjct 177 AAEQAAQLARAMLAETVVRRGTDPRPARDHLEIELP 212 >gi|134098387|ref|YP_001104048.1| hypothetical protein SACE_1808 [Saccharopolyspora erythraea NRRL 2338] gi|291006911|ref|ZP_06564884.1| hypothetical protein SeryN2_20518 [Saccharopolyspora erythraea NRRL 2338] gi|133911010|emb|CAM01123.1| hypothetical protein SACE_1808 [Saccharopolyspora erythraea NRRL 2338] Length=217 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/173 (49%), Positives = 110/173 (64%), Gaps = 4/173 (2%) Query 51 QGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRYSIA 110 GP+D D D V RLDLGSV +P+P GQ+QVE+ SG AV ++T GR +++ Sbjct 34 HGPYDEADAPDDGVE---RLDLGSVRVPVPEGGQLQVEVDPSGPVRAVHMVTQFGRLTVS 90 Query 111 AYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIA-AGVVRFIGVDGYRWM 169 A+AAPKT LW EV+ ELAD LRKD A+V + G WG E++ + +RF+GVDG RW+ Sbjct 91 AFAAPKTSPLWPEVSKELADQLRKDGARVHSEGGDWGPELVADSPKAALRFVGVDGPRWL 150 Query 170 IRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL 222 +R V GP E + L +TVV RGD PLPVRTPLP+ LPE +A + Sbjct 151 VRGVAAGPPEHAKDCAKLLYAVLDETVVVRGDDPLPVRTPLPIQLPEAIARHI 203 >gi|25028354|ref|NP_738408.1| hypothetical protein CE1798 [Corynebacterium efficiens YS-314] gi|259507409|ref|ZP_05750309.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23493639|dbj|BAC18608.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165034|gb|EEW49588.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=274 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/206 (40%), Positives = 119/206 (58%), Gaps = 9/206 (4%) Query 32 DTVVASAAAASGVEDQEELQ-GPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELT 90 D + + A+G D ++ G FD DF LDLGS+ IP+P +VQVE+ Sbjct 51 DPIHDAVTGATGPYDAGQVNIGDFDFSDFSK------GLLDLGSLQIPLPMQSEVQVEMG 104 Query 91 ESGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREV 150 E G P + ++TP+GR + A+A + G WRE E+AD +R+D V ++ GPWGREV Sbjct 105 EQG-PRMLHIVTPHGRITPVAFAGRTSAGQWREATREIADGMRRDGLTVRVEQGPWGREV 163 Query 151 IGIAAG-VVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTP 209 +G A ++R GVDG RWM+R + P + D + E E +A T V RGD P+ +P Sbjct 164 VGEANDRLIRIAGVDGPRWMLRMTMISPADRADDMRELGHEVIARTFVNRGDAPILAGSP 223 Query 210 LPVHLPEPMAAQLREAAAAQADTQRQ 235 LPV LP+ A Q+++A A +A Q+Q Sbjct 224 LPVALPKQFAEQIQQAMAKRAQQQKQ 249 >gi|38233984|ref|NP_939751.1| hypothetical protein DIP1399 [Corynebacterium diphtheriae NCTC 13129] gi|38200246|emb|CAE49930.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length=239 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 78/188 (42%), Positives = 115/188 (62%), Gaps = 10/188 (5%) Query 52 GPFD-----IDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGR 106 GPFD I+DFD A L+LGS+L+P+P +VQVE+ G P + ++T GR Sbjct 53 GPFDADSVNIEDFDFSDFAG-GILNLGSLLVPLPKTSEVQVEMGPDG-PKMLHILTQFGR 110 Query 107 YSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIA---AGVVRFIGV 163 + A+AAPK G WR E+A+ +R D+ V + GPWGRE++G + GV+R IGV Sbjct 111 ITPVAFAAPKAPGQWRSATQEIAEGMRADNLDVDFQQGPWGREIVGTSDDGNGVIRIIGV 170 Query 164 DGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLR 223 DG RWM+R + P E+ + + E RE +A T VRRG+ P+ + LPV LP+P+A Q++ Sbjct 171 DGPRWMLRVTLAAPSESAERMAELGREVVARTFVRRGNEPILAGSSLPVALPQPLAEQVQ 230 Query 224 EAAAAQAD 231 + +A+ Sbjct 231 QEMMRRAE 238 >gi|227488756|ref|ZP_03919072.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227542247|ref|ZP_03972296.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091178|gb|EEI26490.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227182076|gb|EEI63048.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=332 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/194 (42%), Positives = 113/194 (59%), Gaps = 12/194 (6%) Query 52 GPFDID-------DFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPN 104 GPFD + D D + +VL DLGS+ IP+P +VQVE+ E G P + ++TP Sbjct 5 GPFDSESPGARELDVSDFASSVL---DLGSLRIPLPHDSEVQVEMGEQG-PKLLHIVTPY 60 Query 105 GRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG-IAAGVVRFIGV 163 GR + +AA KTG LWREV + D + +D ++DGPWG EV+G +R IGV Sbjct 61 GRITPVGFAAAKTGNLWREVYPSIVDGMTEDGLDAHVEDGPWGPEVVGRTQRATLRLIGV 120 Query 164 DGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLR 223 G RWMIR P ET D + E AR +A T+V RGD P+P PLP+ +P+ +A Q++ Sbjct 121 QGGRWMIRFTCAAPNETADEMAEIARATVARTIVDRGDAPIPPGQPLPISVPDALAKQIQ 180 Query 224 EAAAAQADTQRQAA 237 +A A+A + A Sbjct 181 DAMQARAHREHSIA 194 >gi|213964415|ref|ZP_03392615.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213952608|gb|EEB63990.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=259 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 79/180 (44%), Positives = 109/180 (61%), Gaps = 12/180 (6%) Query 52 GPFDID-------DFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPN 104 GPFDI+ DF D A L+LGS+L+P+P G +QVE+ +G P+ + V T + Sbjct 52 GPFDINSASPTQFDFSD---FAKASLNLGSMLLPIPHVGDIQVEMGPTG-PTMLHVATEH 107 Query 105 GRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIGV 163 GR + A+AAP +GGLW E A E+ D L D V ++ GPWG EV+G + + +R IG Sbjct 108 GRVTPVAFAAPTSGGLWEESAQEIKDGLESDGLDVHVEQGPWGSEVVGRTSDMEMRIIGA 167 Query 164 DGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLR 223 DG RWM+R +GP + + L + AR LA + V RG+ P+P PLPV LP MA Q+R Sbjct 168 DGPRWMLRMTASGPADRAEELADLARGLLARSFVSRGENPMPAGQPLPVTLPSQMAEQIR 227 >gi|336325725|ref|YP_004605691.1| hypothetical protein CRES_1172 [Corynebacterium resistens DSM 45100] gi|336101707|gb|AEI09527.1| hypothetical protein CRES_1172 [Corynebacterium resistens DSM 45100] Length=265 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/208 (41%), Positives = 122/208 (59%), Gaps = 7/208 (3%) Query 36 ASAAAASGVEDQEELQGPFDID--DFDDPSVAVLAR--LDLGSVLIPMPAAGQVQVELTE 91 A+ + A+G + GPFD D D+ + + A+ LDLGS+++P+P G VQV++ Sbjct 39 ATESTANGYDPVNGEFGPFDGDTVDYRNFDFSDFAKGGLDLGSMMVPVPLEGDVQVDVGP 98 Query 92 SGVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVI 151 G P + + T GR + A+AAP+ G LW E E+ + D + ++ GPWG EV Sbjct 99 EG-PQMIHIGTQYGRITPVAFAAPRKGDLWDESVSEIVKGMSGDGLEPTVTQGPWGPEVF 157 Query 152 GIAA-GVVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPL 210 A GV+R +GV G RWM+R + GP+E D L E ARE +A T V RG P+P PL Sbjct 158 AEAGDGVLRILGVTGDRWMLRFTLAGPKEYGDELAELAREVMARTFVMRGQDPIPAGNPL 217 Query 211 PVHLPEPMAAQLREAAAAQADT-QRQAA 237 PVH+P+ MA +L++ AQA+ Q+Q A Sbjct 218 PVHMPQAMAEELQKQMQAQAEELQKQQA 245 >gi|334564694|ref|ZP_08517685.1| hypothetical protein CbovD2_08967 [Corynebacterium bovis DSM 20582] Length=283 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/177 (47%), Positives = 107/177 (61%), Gaps = 8/177 (4%) Query 52 GPFDID-----DFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGR 106 GPFD D DFD A LDLGS+++P+P +VQVE+ G P + VI +GR Sbjct 78 GPFDGDSVSYTDFDFSDFA-KGGLDLGSIMVPVPHTAEVQVEMGPEG-PQMIHVICEHGR 135 Query 107 YSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAA-GVVRFIGVDG 165 + A+AAP+ GGLW+E ++ + +R D V + GPWG EV+ A G +R IGVDG Sbjct 136 LTPVAFAAPRAGGLWQEAIPDIVEGMRADGMTVEVGRGPWGDEVLAEAGDGAMRIIGVDG 195 Query 166 YRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQL 222 RWM+R + GP + DAL E ARE LA T V RG P+P TPLPV +P MA +L Sbjct 196 PRWMLRLTLAGPASSRDALAELAREVLARTFVVRGTEPIPAGTPLPVTIPAAMAEEL 252 >gi|237785644|ref|YP_002906349.1| hypothetical protein ckrop_1054 [Corynebacterium kroppenstedtii DSM 44385] gi|237758556|gb|ACR17806.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM 44385] Length=325 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/194 (41%), Positives = 116/194 (60%), Gaps = 8/194 (4%) Query 38 AAAASGVEDQEELQGPFD-----IDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTES 92 A++AS + E GPFD +D FD A +DLGS+L+P+P ++QVE+++ Sbjct 47 ASSASTFDAMEGESGPFDSRREDLDRFDFSDFAK-GDIDLGSLLVPIPHEAEIQVEVSQE 105 Query 93 GVPSAVWVITPNGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG 152 G P AV V +P GR + A+AAP++GGLW E E+ + D + + GPWG E+ G Sbjct 106 G-PRAVHVASPYGRVTPVAFAAPRSGGLWEEQLNEVEQQITNDGLESHHESGPWGIEITG 164 Query 153 IA-AGVVRFIGVDGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLP 211 + G++ IGV+G WM+R GP+E+ D L R A T+V+RGD+P+P LP Sbjct 165 VGPHGMMHMIGVNGPGWMLRLTAVGPEESHDQLVALTRGIAARTIVKRGDSPMPAGETLP 224 Query 212 VHLPEPMAAQLREA 225 V LP+ MA +L++A Sbjct 225 VALPQDMAQELQKA 238 >gi|260578855|ref|ZP_05846761.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258603002|gb|EEW16273.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length=233 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 109/197 (56%), Gaps = 8/197 (4%) Query 52 GPFDID-----DFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGR 106 GPFD D DFD A A LDLGS++IP+P G+V VE+ G P + + GR Sbjct 32 GPFDGDTVNFQDFDFSDFASGA-LDLGSMIIPVPHGGRVSVEMGPEG-PQMIHLEIDGGR 89 Query 107 YSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAA-GVVRFIGVDG 165 + A+AAP+ G LW E E + KD V ++DGPWG+E+ +A G +R IGV+G Sbjct 90 ITPVAFAAPRNGDLWGESVDETVAGMTKDGLDVHVEDGPWGQEICAVAGEGQMRLIGVNG 149 Query 166 YRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREA 225 RWM R + G + D L + RE +A T +RRG PLP PLPV +P+ MA +++E Sbjct 150 PRWMFRATLAGEKSKADELAKIGREIIARTFIRRGSDPLPAGQPLPVQMPQAMADEVQEQ 209 Query 226 AAAQADTQRQAAAGVAR 242 A Q + V R Sbjct 210 LKQLAHRQNAGSEVVTR 226 >gi|256375653|ref|YP_003099313.1| hypothetical protein Amir_1516 [Actinosynnema mirum DSM 43827] gi|255919956|gb|ACU35467.1| hypothetical protein Amir_1516 [Actinosynnema mirum DSM 43827] Length=207 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 82/190 (44%), Positives = 116/190 (62%), Gaps = 8/190 (4%) Query 44 VEDQEELQGPFDIDDFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITP 103 +E+ EE GPFD + + RLDLGSV +P+P Q+QVE+ +G AV ++TP Sbjct 23 MEEGEEATGPFDSTQAPEDGIN---RLDLGSVQLPVPDGVQLQVEMDPTGAVRAVHLLTP 79 Query 104 NGRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAGV-VRFIG 162 G+ +++A+AAPKT LW EV+ EL L+ D+ +++ +G WG E+ + V +RF+G Sbjct 80 VGQLTVSAFAAPKTERLWPEVSAELITQLKGDNFRINRLNGEWGEEITARSPEVHLRFVG 139 Query 163 VDGYRWMIRCVVNGP-QETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQ 221 VDG RWM+R V P +E + R+ L TVV RG P+PVRTPLPV LPE +A Sbjct 140 VDGPRWMLRGVAAAPSEEQAEQALMALRDLLRYTVVVRGTQPMPVRTPLPVELPEAIA-- 197 Query 222 LREAAAAQAD 231 R AA Q + Sbjct 198 -RHIAAQQQE 206 >gi|68536158|ref|YP_250863.1| hypothetical protein jk1081 [Corynebacterium jeikeium K411] gi|68263757|emb|CAI37245.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length=233 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/197 (41%), Positives = 108/197 (55%), Gaps = 8/197 (4%) Query 52 GPFDID-----DFDDPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGR 106 GPFD D DFD A A LDLGS++IP+P G+V VE+ G P + + GR Sbjct 32 GPFDGDTVNFQDFDFSDFASGA-LDLGSMIIPVPHGGRVSVEMGPEG-PQMIHLEIDGGR 89 Query 107 YSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAA-GVVRFIGVDG 165 + A+AAP+ G LW E E + KD V ++DGPWG+E+ +A G +R IGV+G Sbjct 90 ITPVAFAAPRNGDLWGESVEETVAGMTKDGLDVHLEDGPWGQEICAVAGEGQMRLIGVNG 149 Query 166 YRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLREA 225 RWM R + G + D L + RE +A T +RRG P P PLPV +P+ MA +++E Sbjct 150 PRWMFRATLAGEKSKADELAKIGREIIARTFIRRGSDPFPAGQPLPVQMPQAMADEVQEQ 209 Query 226 AAAQADTQRQAAAGVAR 242 A Q + V R Sbjct 210 LKQLAHRQNAGSEVVTR 226 >gi|145295808|ref|YP_001138629.1| hypothetical protein cgR_1733 [Corynebacterium glutamicum R] gi|140845728|dbj|BAF54727.1| hypothetical protein [Corynebacterium glutamicum R] gi|344044039|gb|EGV39720.1| hypothetical protein CgS9114_11062 [Corynebacterium glutamicum S9114] Length=292 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/176 (45%), Positives = 106/176 (61%), Gaps = 12/176 (6%) Query 52 GPFD-----IDDFD--DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPN 104 GPFD I DFD D S VL DLGS+ +P+P +VQVE+ E G P + V+T Sbjct 76 GPFDAGSVNIQDFDFSDFSKGVL---DLGSIQVPLPQNSEVQVEMGEQG-PRMLHVVTQF 131 Query 105 GRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAG-VVRFIGV 163 GR + A+AAP + G WRE E+A+ +R+D V ++ GPWGREV+G A +R GV Sbjct 132 GRITPVAFAAPTSAGQWREATKEIAEGMRRDGLTVHVEKGPWGREVVGEANDRKIRIAGV 191 Query 164 DGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMA 219 DG RWM+R + P + D + + RE +A T V RGD P+ +PLPV LP+ +A Sbjct 192 DGPRWMLRMTMISPSDRADDMRDLGREVIARTFVNRGDAPILAGSPLPVALPKQLA 247 >gi|340794538|ref|YP_004760001.1| hypothetical protein CVAR_1574 [Corynebacterium variabile DSM 44702] gi|340534448|gb|AEK36928.1| hypothetical protein CVAR_1574 [Corynebacterium variabile DSM 44702] Length=297 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/177 (43%), Positives = 110/177 (63%), Gaps = 6/177 (3%) Query 52 GPFDID--DFDDPSVAVLAR--LDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPNGRY 107 GPFD D ++ D + A+ LDLGS+LIP+P G+VQVE+ + G P + ++TP GR Sbjct 67 GPFDGDSVNYRDFDFSDFAKGGLDLGSMLIPVPHKGEVQVEMGKEG-PRQIHILTPFGRI 125 Query 108 SIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIG-IAAGVVRFIGVDGY 166 + AA+AAP++GG W A+S+ D +V+ +D WG E++G + GVVR IGVDG Sbjct 126 TPAAFAAPRSGGQWASDIDGFAESMAGDGLEVTRRDNDWGVELVGTVGDGVVRVIGVDGP 185 Query 167 RWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMAAQLR 223 RWM+R + GP + + L E + E ++ T V RG P P LPV +P+ MA +L+ Sbjct 186 RWMLRMTLAGPATSAEELAELSYEVISRTFVNRGSEPAPAGRSLPVAIPQAMADELK 242 >gi|19553108|ref|NP_601110.1| hypothetical protein NCgl1829 [Corynebacterium glutamicum ATCC 13032] gi|62390743|ref|YP_226145.1| hypothetical protein cg2085 [Corynebacterium glutamicum ATCC 13032] gi|21324674|dbj|BAB99297.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41326081|emb|CAF20244.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=287 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 78/176 (45%), Positives = 106/176 (61%), Gaps = 12/176 (6%) Query 52 GPFD-----IDDFD--DPSVAVLARLDLGSVLIPMPAAGQVQVELTESGVPSAVWVITPN 104 GPFD I DFD D S VL DLGS+ +P+P +VQVE+ E G P + V+T Sbjct 76 GPFDAGSVNIQDFDFSDFSKGVL---DLGSIQVPLPQNSEVQVEMGEQG-PRMLHVVTQF 131 Query 105 GRYSIAAYAAPKTGGLWREVAGELADSLRKDSAKVSIKDGPWGREVIGIAAG-VVRFIGV 163 GR + A+AAP + G WRE E+A+ +R+D V ++ GPWGREV+G A +R GV Sbjct 132 GRITPVAFAAPTSAGQWREATKEIAEGMRRDGLTVHVEKGPWGREVVGEANDRKIRIAGV 191 Query 164 DGYRWMIRCVVNGPQETVDALTEEAREALADTVVRRGDTPLPVRTPLPVHLPEPMA 219 DG RWM+R + P + D + + RE +A T V RGD P+ +PLPV LP+ +A Sbjct 192 DGPRWMLRMTMISPSDRADDMRDLGREVIARTFVNRGDAPILAGSPLPVALPKQLA 247 Lambda K H 0.315 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 382276364284 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40