BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2707 Length=324 Score E Sequences producing significant alignments: (Bits) Value gi|15609844|ref|NP_217223.1| hypothetical protein Rv2707 [Mycoba... 644 0.0 gi|183982020|ref|YP_001850311.1| hypothetical protein MMAR_2006 ... 479 4e-133 gi|118618670|ref|YP_907002.1| hypothetical protein MUL_3347 [Myc... 478 6e-133 gi|296171840|ref|ZP_06852939.1| ribonuclease BN [Mycobacterium p... 469 3e-130 gi|240169691|ref|ZP_04748350.1| hypothetical protein MkanA1_1028... 463 1e-128 gi|15827490|ref|NP_301753.1| integral membrane protein [Mycobact... 463 1e-128 gi|118462877|ref|YP_882777.1| hypothetical protein MAV_3600 [Myc... 445 5e-123 gi|41408921|ref|NP_961757.1| hypothetical protein MAP2823 [Mycob... 444 6e-123 gi|342858425|ref|ZP_08715080.1| hypothetical protein MCOL_06106 ... 444 8e-123 gi|254821654|ref|ZP_05226655.1| hypothetical protein MintA_17092... 437 1e-120 gi|108799147|ref|YP_639344.1| ribonuclease BN [Mycobacterium sp.... 393 2e-107 gi|118471083|ref|YP_887086.1| hypothetical protein MSMEG_2755 [M... 392 3e-107 gi|333991089|ref|YP_004523703.1| hypothetical protein JDM601_245... 392 4e-107 gi|120403444|ref|YP_953273.1| ribonuclease BN [Mycobacterium van... 381 8e-104 gi|145224526|ref|YP_001135204.1| ribonuclease BN [Mycobacterium ... 376 3e-102 gi|169630108|ref|YP_001703757.1| ribonuclease BN [Mycobacterium ... 363 1e-98 gi|289444249|ref|ZP_06433993.1| conserved hypothetical protein [... 338 7e-91 gi|317506481|ref|ZP_07964282.1| ribonuclease BN family protein [... 276 4e-72 gi|333919429|ref|YP_004493010.1| hypothetical protein AS9A_1761 ... 276 4e-72 gi|296393380|ref|YP_003658264.1| ribonuclease BN [Segniliparus r... 270 2e-70 gi|229491263|ref|ZP_04385089.1| ribonuclease BN [Rhodococcus ery... 259 5e-67 gi|226306295|ref|YP_002766255.1| hypothetical protein RER_28080 ... 258 7e-67 gi|300784486|ref|YP_003764777.1| ribonuclease BN [Amycolatopsis ... 253 2e-65 gi|302525720|ref|ZP_07278062.1| ribonuclease BN [Streptomyces sp... 251 9e-65 gi|111023775|ref|YP_706747.1| hypothetical protein RHA1_ro06817 ... 250 2e-64 gi|226366211|ref|YP_002783994.1| hypothetical protein ROP_68020 ... 248 7e-64 gi|312139428|ref|YP_004006764.1| ribonuclease bn [Rhodococcus eq... 248 8e-64 gi|296139552|ref|YP_003646795.1| ribonuclease BN [Tsukamurella p... 240 2e-61 gi|256375638|ref|YP_003099298.1| ribonuclease BN [Actinosynnema ... 236 3e-60 gi|54025740|ref|YP_119982.1| hypothetical protein nfa37700 [Noca... 234 2e-59 gi|257056430|ref|YP_003134262.1| hypothetical protein Svir_24410... 232 7e-59 gi|134098374|ref|YP_001104035.1| ribonuclease BN [Saccharopolysp... 231 9e-59 gi|326384456|ref|ZP_08206136.1| ribonuclease BN [Gordonia neofel... 223 4e-56 gi|262202174|ref|YP_003273382.1| ribonuclease BN [Gordonia bronc... 221 1e-55 gi|284989615|ref|YP_003408169.1| ribonuclease BN [Geodermatophil... 219 5e-55 gi|331696938|ref|YP_004333177.1| ribonuclease BN [Pseudonocardia... 218 1e-54 gi|284991960|ref|YP_003410514.1| ribonuclease BN [Geodermatophil... 198 1e-48 gi|258653906|ref|YP_003203062.1| ribonuclease BN [Nakamurella mu... 191 2e-46 gi|258650769|ref|YP_003199925.1| ribonuclease BN [Nakamurella mu... 187 2e-45 gi|158313101|ref|YP_001505609.1| ribonuclease BN [Frankia sp. EA... 177 3e-42 gi|288920775|ref|ZP_06415075.1| ribonuclease BN [Frankia sp. EUN... 160 3e-37 gi|86742177|ref|YP_482577.1| ribonuclease BN [Frankia sp. CcI3] ... 159 8e-37 gi|111225044|ref|YP_715838.1| hypothetical protein FRAAL5685 [Fr... 157 3e-36 gi|302541789|ref|ZP_07294131.1| putative integral membrane prote... 153 4e-35 gi|320007739|gb|ADW02589.1| ribonuclease BN [Streptomyces flavog... 153 5e-35 gi|297191204|ref|ZP_06908602.1| integral membrane protein [Strep... 152 8e-35 gi|345002845|ref|YP_004805699.1| ribonuclease BN [Streptomyces s... 152 1e-34 gi|312195054|ref|YP_004015115.1| ribonuclease BN [Frankia sp. Eu... 150 2e-34 gi|328885970|emb|CCA59209.1| putative integral membrane protein ... 149 4e-34 gi|84496269|ref|ZP_00995123.1| putative integral membrane protei... 149 5e-34 >gi|15609844|ref|NP_217223.1| hypothetical protein Rv2707 [Mycobacterium tuberculosis H37Rv] gi|15842245|ref|NP_337282.1| hypothetical protein MT2780 [Mycobacterium tuberculosis CDC1551] gi|31793879|ref|NP_856372.1| hypothetical protein Mb2726 [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=324 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/324 (100%), Positives = 324/324 (100%), Gaps = 0/324 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP Sbjct 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS Sbjct 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES Sbjct 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL Sbjct 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA Sbjct 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 Query 301 RIGVGTTTYSSTAQHSAVAAEPPS 324 RIGVGTTTYSSTAQHSAVAAEPPS Sbjct 301 RIGVGTTTYSSTAQHSAVAAEPPS 324 >gi|183982020|ref|YP_001850311.1| hypothetical protein MMAR_2006 [Mycobacterium marinum M] gi|183175346|gb|ACC40456.1| conserved membrane protein [Mycobacterium marinum M] Length=324 Score = 479 bits (1232), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 260/324 (81%), Positives = 290/324 (90%), Gaps = 0/324 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQVP+P RHHIWRI+ RTLSKSWDDSIFSESAQA FWSALSLPPLLLGMLGSLAYVAP Sbjct 1 MSDQVPRPSRHHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFG DTLPAIEK+ +S H FFSPSVV+EIIEPTI DIT NARGEV S+GFLISLWAGSS Sbjct 61 LFGQDTLPAIEKTIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AIS++VDA+VEAHDQTPLRHPVRQRFFALFLYVV L+F+V +APV V+GPRKVSEHIP++ Sbjct 121 AISSYVDAIVEAHDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGPRKVSEHIPDN 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 ++NL+ YGYYPALI LTVGVI+LYRV+LPVPLPTHRL+LGAVLA+AVFLIATLGLR YL Sbjct 181 MSNLMHYGYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFA+M+GAELNAA+QEEWPAPATHAHRL NWL+A Sbjct 241 GWITHTGYTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQEEWPAPATHAHRLRNWLRA 300 Query 301 RIGVGTTTYSSTAQHSAVAAEPPS 324 R T + S + S A +PPS Sbjct 301 RTAAATGSADSESPQSNTAVDPPS 324 >gi|118618670|ref|YP_907002.1| hypothetical protein MUL_3347 [Mycobacterium ulcerans Agy99] gi|118570780|gb|ABL05531.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=324 Score = 478 bits (1230), Expect = 6e-133, Method: Compositional matrix adjust. Identities = 260/324 (81%), Positives = 290/324 (90%), Gaps = 0/324 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MS+QVP+P RHHIWRI+ RTLSKSWDDSIFSESAQA FWSALSLPPLLLGMLGSLAYVAP Sbjct 1 MSEQVPRPSRHHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFG DTLPAIEK+ +S H FFSPSVV+EIIEPTI DIT NARGEV S+GFLISLWAGSS Sbjct 61 LFGQDTLPAIEKTIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AIS++VDA+VEAHDQTPLRHPVRQRFFALFLYVV L+F+V +APV V+GPRKVSEHIP+S Sbjct 121 AISSYVDAIVEAHDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGPRKVSEHIPDS 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 ++NL+ YGYYPALI LTVGVI+LYRV+LPVPLPTHRL+LGAVLA+AVFLIATLGLR YL Sbjct 181 MSNLMHYGYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFA+M+GAELNAA+QEEWPAPATHAHRL NWL+A Sbjct 241 GWITHTGYTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQEEWPAPATHAHRLRNWLRA 300 Query 301 RIGVGTTTYSSTAQHSAVAAEPPS 324 R T + S + S A +PPS Sbjct 301 RTAAATGSADSESPQSNTAVDPPS 324 >gi|296171840|ref|ZP_06852939.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893924|gb|EFG73693.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614] Length=330 Score = 469 bits (1206), Expect = 3e-130, Method: Compositional matrix adjust. Identities = 264/326 (81%), Positives = 283/326 (87%), Gaps = 4/326 (1%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQV KP RHHIWR++ RTL+KSWDDSIFSESAQA FWSALSLPPLLLGMLGSLAYVAP Sbjct 1 MSDQVAKPSRHHIWRLSVRTLAKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPDTL AIEKS +S SFFSPSVVNEIIEPTI D+T NARGEV S+GFLIS+WAGSS Sbjct 61 LFGPDTLTAIEKSIISAIRSFFSPSVVNEIIEPTIRDVTANARGEVVSVGFLISMWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISA+VDAVVEAHDQTPLRHPVRQR FALFLYVVMLVF+V APV+VVGPRKVSEHIP Sbjct 121 AISAYVDAVVEAHDQTPLRHPVRQRLFALFLYVVMLVFVVCAAPVLVVGPRKVSEHIPYD 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 LAN+LRYGYYPALILGL VGV++LYRVALP PLPTHRL+ GAVLA AVFLIATLGLRVYL Sbjct 181 LANVLRYGYYPALILGLLVGVVILYRVALPEPLPTHRLLFGAVLATAVFLIATLGLRVYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGALATPIAFLLFAFFGGFA+MLGAE NAA+QEE+PAP THAHRL WL+A Sbjct 241 GWITSTGYTYGALATPIAFLLFAFFGGFAVMLGAEFNAAIQEEFPAPKTHAHRLRKWLQA 300 Query 301 RIGVGTTT----YSSTAQHSAVAAEP 322 RI V T +AV AEP Sbjct 301 RITVPKRTAGAPPEPAPADNAVTAEP 326 >gi|240169691|ref|ZP_04748350.1| hypothetical protein MkanA1_10287 [Mycobacterium kansasii ATCC 12478] Length=314 Score = 463 bits (1192), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 267/301 (89%), Positives = 282/301 (94%), Gaps = 0/301 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQ PKP RHHIWRI+ RTLSKSWDDSIFSESAQA FWSALSLPPLLLGMLGSLAYVAP Sbjct 5 MSDQTPKPSRHHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAP 64 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFG DTLPAIEK+ +STAHSFFSPSVVNEIIEPTI DIT NARGEV SLGFLISLWAGSS Sbjct 65 LFGQDTLPAIEKTIISTAHSFFSPSVVNEIIEPTIRDITANARGEVVSLGFLISLWAGSS 124 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AIS++VDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVF+VATAPV VVGPRKVSE IP S Sbjct 125 AISSYVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFVVATAPVAVVGPRKVSERIPAS 184 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 LAN+L YGYYPALI+GLT+GVI+LYRVALPVPLPTHRLV+GAVLA AVFLIATLGLR YL Sbjct 185 LANILHYGYYPALIVGLTLGVIILYRVALPVPLPTHRLVIGAVLATAVFLIATLGLRFYL 244 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFAIM+GAELNAA+QEEWPAPATHAHRL WL+A Sbjct 245 TWITSTGYTYGALSTPIAFLLFAFFGGFAIMIGAELNAAIQEEWPAPATHAHRLRTWLRA 304 Query 301 R 301 R Sbjct 305 R 305 >gi|15827490|ref|NP_301753.1| integral membrane protein [Mycobacterium leprae TN] gi|221229967|ref|YP_002503383.1| hypothetical protein MLBr_01017 [Mycobacterium leprae Br4923] gi|699178|gb|AAA62943.1| u1764d [Mycobacterium leprae] gi|13093040|emb|CAC31398.1| possible conserved integral membrane protein [Mycobacterium leprae] gi|219933074|emb|CAR71112.1| possible conserved integral membrane protein [Mycobacterium leprae Br4923] Length=330 Score = 463 bits (1192), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 245/325 (76%), Positives = 274/325 (85%), Gaps = 4/325 (1%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MS QV KP R HIWRI+ RTLSKSWDDSIFSESAQAAFWSALSLPPL+LGMLGSLAYVAP Sbjct 1 MSGQVYKPTRQHIWRISLRTLSKSWDDSIFSESAQAAFWSALSLPPLVLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFG DTLP IE+ +S AHSFFSPSVVNEIIEPTI D+ N ARGEV SLGFLISLWAGSS Sbjct 61 LFGEDTLPTIERRVISMAHSFFSPSVVNEIIEPTISDVNNGARGEVVSLGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVDAVV+AHDQT LRHPV+QR FALFLY+ ML F+VATAP++VVGPRKV++ IP S Sbjct 121 AISAFVDAVVKAHDQTLLRHPVKQRLFALFLYIAMLAFVVATAPLVVVGPRKVTKLIPHS 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 AN+L GYYPA+I+ L V V++LYRVALP+PLPTHRLV GA+LA AVF+I TLGLR+YL Sbjct 181 WANMLHLGYYPAVIVSLLVAVMILYRVALPIPLPTHRLVFGAILATAVFVITTLGLRIYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL TPIAFLLFAFFGGFAIMLGAE NA++QE++PAP TH HRL NWL + Sbjct 241 KWITGTGYTYGALTTPIAFLLFAFFGGFAIMLGAEFNASIQEKFPAPKTHTHRLHNWLTS 300 Query 301 RI----GVGTTTYSSTAQHSAVAAE 321 R+ G T T +T S AAE Sbjct 301 RLHTDPGRNTVTTQTTQHRSGRAAE 325 >gi|118462877|ref|YP_882777.1| hypothetical protein MAV_3600 [Mycobacterium avium 104] gi|118164164|gb|ABK65061.1| conserved hypothetical protein [Mycobacterium avium 104] Length=333 Score = 445 bits (1144), Expect = 5e-123, Method: Compositional matrix adjust. Identities = 250/301 (84%), Positives = 273/301 (91%), Gaps = 0/301 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQV KP RHHIWRIT RTLSKSWDDSIFSESAQA FWSALSLPPLLLG+LG+LAYVAP Sbjct 1 MSDQVAKPSRHHIWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPD LP+I + +STAHS FSPSVVNEIIEPT+ DI NNARGEV SLGFLISLWAGSS Sbjct 61 LFGPDMLPSILRQLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVD+VVEAHDQTPLRHPVRQRFFALFLYVVMLV +VATAP++VVGPRKV EHIP Sbjct 121 AISAFVDSVVEAHDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGPRKVGEHIPLG 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 L+N+LRYGYYPALI+GLT+ V++LYRVALP PLP+HRL+LGA+LA VF+ ATLGLR YL Sbjct 181 LSNVLRYGYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFAIMLGAELNAAVQEE+PAP THAHRL WL + Sbjct 241 RWITSTGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPKTHAHRLRTWLFS 300 Query 301 R 301 R Sbjct 301 R 301 >gi|41408921|ref|NP_961757.1| hypothetical protein MAP2823 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776040|ref|ZP_05217556.1| hypothetical protein MaviaA2_15410 [Mycobacterium avium subsp. avium ATCC 25291] gi|41397280|gb|AAS05140.1| hypothetical protein MAP_2823 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458797|gb|EGO37754.1| putative membrane protein [Mycobacterium avium subsp. paratuberculosis S397] Length=333 Score = 444 bits (1143), Expect = 6e-123, Method: Compositional matrix adjust. Identities = 250/301 (84%), Positives = 273/301 (91%), Gaps = 0/301 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQV KP RHHIWRIT RTLSKSWDDSIFSESAQA FWSALSLPPLLLG+LG+LAYVAP Sbjct 1 MSDQVAKPSRHHIWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPD LP+I + +STAHS FSPSVVNEIIEPT+ DI NNARGEV SLGFLISLWAGSS Sbjct 61 LFGPDMLPSILRQLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVD+VVEAHDQTPLRHPVRQRFFALFLYVVMLV +VATAP++VVGPRKV EHIP Sbjct 121 AISAFVDSVVEAHDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGPRKVGEHIPLG 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 L+N+LRYGYYPALI+GLT+ V++LYRVALP PLP+HRL+LGA+LA VF+ ATLGLR YL Sbjct 181 LSNVLRYGYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFAIMLGAELNAAVQEE+PAP THAHRL WL + Sbjct 241 RWITSTGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPKTHAHRLRTWLFS 300 Query 301 R 301 R Sbjct 301 R 301 >gi|342858425|ref|ZP_08715080.1| hypothetical protein MCOL_06106 [Mycobacterium colombiense CECT 3035] gi|342134129|gb|EGT87309.1| hypothetical protein MCOL_06106 [Mycobacterium colombiense CECT 3035] Length=334 Score = 444 bits (1142), Expect = 8e-123, Method: Compositional matrix adjust. Identities = 254/333 (77%), Positives = 281/333 (85%), Gaps = 10/333 (3%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MS+QV KP RHHIWRIT RTLSKSWDDSIFSESAQA FWSALSLPPLLLG+LG+LAYVAP Sbjct 1 MSEQVAKPSRHHIWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPD LP+I + +STAHS FS SVVNEIIEPT+ DI NNARGEV SLGF+ISLWAGSS Sbjct 61 LFGPDMLPSILRQLISTAHSVFSRSVVNEIIEPTVRDIANNARGEVVSLGFIISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVD+VVEAHDQTPLRHPVRQR FALFLYVV LVF+VATAP++V+GPRKV EHIP Sbjct 121 AISAFVDSVVEAHDQTPLRHPVRQRLFALFLYVVGLVFVVATAPLVVMGPRKVGEHIPLG 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 LAN+LRYGYYPALIL L GV++LYRV+LP PLPTHRL+ GA LA AVF+IATLGLRVYL Sbjct 181 LANVLRYGYYPALILALMFGVVILYRVSLPEPLPTHRLIFGAALATAVFVIATLGLRVYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLF+FFGGFAIM+GAELNAA+QEE+PAP THAHRL WL + Sbjct 241 QWITSTGYTYGALSTPIAFLLFSFFGGFAIMIGAELNAAIQEEFPAPRTHAHRLRRWLLS 300 Query 301 R---IGVGTTTYSS-------TAQHSAVAAEPP 323 R + T S+ TAQ AEPP Sbjct 301 RSPALAKAADTLSNPVTKNPITAQRDVAPAEPP 333 >gi|254821654|ref|ZP_05226655.1| hypothetical protein MintA_17092 [Mycobacterium intracellulare ATCC 13950] Length=333 Score = 437 bits (1124), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 254/332 (77%), Positives = 280/332 (85%), Gaps = 9/332 (2%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQV KP RHHIWRIT R LSKSWDDSIFSESAQA FWSALSLPPLLLGMLG++AYVAP Sbjct 1 MSDQVAKPSRHHIWRITLRALSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGTMAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPD LP I + LSTAHS FSPSVVNEIIEPT+ DI +NARGEV SLGF+ISLWAGSS Sbjct 61 LFGPDMLPNILRQLLSTAHSVFSPSVVNEIIEPTVRDIASNARGEVVSLGFIISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVD+VVEAHDQTPLRHPVRQRFFALFLYVVMLV +VATAP++VVGPRKV EHIP Sbjct 121 AISAFVDSVVEAHDQTPLRHPVRQRFFALFLYVVMLVVVVATAPLVVVGPRKVEEHIPLG 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 L+N+LRYGYYPALI+GLT+GV++LYRVALP PLP+HRL+LGA+LA VF+ ATLGLR YL Sbjct 181 LSNVLRYGYYPALIIGLTLGVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 WIT TGYTYGAL+TPIAFLLFAFFGGFAIMLGAELNAAVQEE+PAP THAHR+ WL + Sbjct 241 RWITSTGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPTTHAHRVRTWLFS 300 Query 301 RIGVGTTTYSS---------TAQHSAVAAEPP 323 R T + T Q A+PP Sbjct 301 RSPALKKTVETLASPIANPATQQRDTAPAKPP 332 >gi|108799147|ref|YP_639344.1| ribonuclease BN [Mycobacterium sp. MCS] gi|119868262|ref|YP_938214.1| ribonuclease BN [Mycobacterium sp. KMS] gi|126434755|ref|YP_001070446.1| ribonuclease BN [Mycobacterium sp. JLS] gi|108769566|gb|ABG08288.1| ribonuclease BN [Mycobacterium sp. MCS] gi|119694351|gb|ABL91424.1| ribonuclease BN [Mycobacterium sp. KMS] gi|126234555|gb|ABN97955.1| ribonuclease BN [Mycobacterium sp. JLS] Length=321 Score = 393 bits (1009), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 221/303 (73%), Positives = 252/303 (84%), Gaps = 2/303 (0%) Query 1 MSDQVP--KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYV 58 M+DQ P RHH+ R RTLSKSWDDSIFSESAQAAFW ALSLPPLLLGMLGSLAY+ Sbjct 1 MTDQPPPVNTTRHHVRRTLVRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYI 60 Query 59 APLFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAG 118 APLFGPD LP IE + TA+SFFS +VVNEII PT+ DI ARGEV SLGF+ISLWAG Sbjct 61 APLFGPDVLPTIENQLIRTANSFFSSNVVNEIIAPTVSDIVKGARGEVVSLGFVISLWAG 120 Query 119 SSAISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIP 178 SSAISAFVD++VEAHDQTPLRHPVRQRF+AL LYVVMLVF V TAP++ +GPRKV+ IP Sbjct 121 SSAISAFVDSIVEAHDQTPLRHPVRQRFYALGLYVVMLVFAVGTAPLLALGPRKVAALIP 180 Query 179 ESLANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRV 238 + +LR+GY+PAL L L V V +LYRV+LP PLP+HRL+LG++LA VFL+ TLGLRV Sbjct 181 DEWDAVLRFGYWPALFLSLLVAVNILYRVSLPKPLPSHRLILGSILATVVFLVTTLGLRV 240 Query 239 YLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWL 298 YL WIT TGYTYGALATPIAFLLFAFF GFAIM+GAELNAAV+E+WPAP+THA R WL Sbjct 241 YLTWITSTGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAVEEQWPAPSTHARRAKVWL 300 Query 299 KAR 301 + R Sbjct 301 EER 303 >gi|118471083|ref|YP_887086.1| hypothetical protein MSMEG_2755 [Mycobacterium smegmatis str. MC2 155] gi|118172370|gb|ABK73266.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=330 Score = 392 bits (1008), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 222/319 (70%), Positives = 257/319 (81%), Gaps = 2/319 (0%) Query 8 PHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTL 67 P RHHI I +RTLSKSWDDSIFSESAQAAFW ALSLPPLLLGMLGSLAY+APLFGP+TL Sbjct 10 PSRHHIRHIAKRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYIAPLFGPETL 69 Query 68 PAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVD 127 P I+ ++ A+SFFSP+VVNEIIEPTI DI ARGEV S+GF+ISLWAGSSA+SAFVD Sbjct 70 PTIQNQLITAANSFFSPNVVNEIIEPTIRDIVKGARGEVVSIGFVISLWAGSSAVSAFVD 129 Query 128 AVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRY 187 ++VEAHDQTPLRHPVRQRF+AL LYVVMLV +A AP++ +GPRK++E +P+S N L Y Sbjct 130 SIVEAHDQTPLRHPVRQRFYALGLYVVMLVGAIAAAPLVALGPRKIAEQLPDSWDNALHY 189 Query 188 GYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTG 247 GYYPAL + + V +LYRV+LP PLPTHRL+LG VLA VFL+ T+GLRVYL WIT TG Sbjct 190 GYYPALFFAVALFVTVLYRVSLPEPLPTHRLLLGTVLATVVFLVTTVGLRVYLTWITSTG 249 Query 248 YTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIGVGTT 307 YTYGALATPIAFLLFAFF GFAIM+GAELNAA+QEEWPA THA R+ W++ R G Sbjct 250 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAIQEEWPAADTHATRVRKWIETRTRNGGA 309 Query 308 TYSSTAQHSAV--AAEPPS 324 + V AAE PS Sbjct 310 EEPVRDEPDPVPGAAEEPS 328 >gi|333991089|ref|YP_004523703.1| hypothetical protein JDM601_2450 [Mycobacterium sp. JDM601] gi|333487058|gb|AEF36450.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=319 Score = 392 bits (1007), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 221/303 (73%), Positives = 252/303 (84%), Gaps = 0/303 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 M+DQ+PKP RHH+ RI RRTL KSWDDSIF+ESAQA FWS LSLPPLLLGMLGSL+YVAP Sbjct 1 MADQIPKPSRHHLLRIARRTLVKSWDDSIFAESAQAGFWSVLSLPPLLLGMLGSLSYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPDTL I+ + A SFFS +VV EIIEPT+ DI +NARGEV SLGF+ISLWAGSS Sbjct 61 LFGPDTLATIQDRLIGMASSFFSQNVVVEIIEPTVRDIVSNARGEVVSLGFVISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVD+VVEAHDQTPLRHPVRQRFFAL LYV MLV VA AP +GP ++EH+P Sbjct 121 AISAFVDSVVEAHDQTPLRHPVRQRFFALGLYVAMLVIAVAGAPFAALGPHAIAEHLPAR 180 Query 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 +LLR+GYYP L+LGL + V +LYRV+LP PLP+HRLV+GA+LA VF++ATLGLRVYL Sbjct 181 WTDLLRFGYYPTLVLGLLLAVTVLYRVSLPKPLPSHRLVIGALLATTVFVVATLGLRVYL 240 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 +IT TGYTYGALATPIAFLLFAF GFAIMLGAELNAA+QEEWPA ATH +L WL + Sbjct 241 RYITSTGYTYGALATPIAFLLFAFLLGFAIMLGAELNAAIQEEWPAEATHLRQLRVWLVS 300 Query 301 RIG 303 R G Sbjct 301 RTG 303 >gi|120403444|ref|YP_953273.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1] gi|119956262|gb|ABM13267.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1] Length=344 Score = 381 bits (979), Expect = 8e-104, Method: Compositional matrix adjust. Identities = 222/310 (72%), Positives = 251/310 (81%), Gaps = 0/310 (0%) Query 4 QVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFG 63 Q +P RHHI IT R LSKSWDDSIFSESAQAAFW ALSLPPLLLGMLGSLAYVAPLFG Sbjct 14 QRARPSRHHIRHITIRALSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYVAPLFG 73 Query 64 PDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAIS 123 PDTL I+ +S A FFSP+VV+EIIEPT+ DI ARGEV SLGF+ISLWAGSSAIS Sbjct 74 PDTLVTIQSQLVSLAGRFFSPNVVSEIIEPTVRDIVRGARGEVVSLGFVISLWAGSSAIS 133 Query 124 AFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLAN 183 AFVD++ EAHDQTPLRHPVRQRF+AL LYVVMLV + AP + +GPRKV+E IP+S + Sbjct 134 AFVDSITEAHDQTPLRHPVRQRFYALGLYVVMLVGAIVAAPFLALGPRKVAEFIPDSWDS 193 Query 184 LLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWI 243 L++ YYP L + L V V LLYRV+LP PLP+HRL+LG+VLA AVFLIAT GLRVYL WI Sbjct 194 ALQFAYYPVLFVALVVSVNLLYRVSLPKPLPSHRLLLGSVLAAAVFLIATWGLRVYLTWI 253 Query 244 TRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIG 303 T TGYTYGALATPIAFLLFAFF GFAIM+GAELNAA++EE+PAP THA R WL+A+ Sbjct 254 TSTGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAIEEEFPAPDTHAKRFRWWLEAKAE 313 Query 304 VGTTTYSSTA 313 T S TA Sbjct 314 SLNGTTSPTA 323 >gi|145224526|ref|YP_001135204.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK] gi|315444857|ref|YP_004077736.1| hypothetical protein Mspyr1_32900 [Mycobacterium sp. Spyr1] gi|145217012|gb|ABP46416.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK] gi|315263160|gb|ADT99901.1| predicted membrane protein [Mycobacterium sp. Spyr1] Length=323 Score = 376 bits (965), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 214/294 (73%), Positives = 242/294 (83%), Gaps = 0/294 (0%) Query 8 PHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTL 67 P RHHI I RTL KSWDDSIF+ESAQAAFW ALSLPPLLLGMLGSLAYVAPLFGPDTL Sbjct 18 PSRHHIRHIVARTLGKSWDDSIFAESAQAAFWCALSLPPLLLGMLGSLAYVAPLFGPDTL 77 Query 68 PAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVD 127 IE +S A FFSP+VV EIIEPT+ DI N ARGEV SLGF+ISLWAGSSAISAFVD Sbjct 78 LTIENQLISLAGKFFSPNVVGEIIEPTVRDIVNGARGEVVSLGFVISLWAGSSAISAFVD 137 Query 128 AVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRY 187 ++ EAH QT LRHPVRQRF+AL LYVVML+ + TAP + +GPRKV+E IP+S + LR+ Sbjct 138 SITEAHGQTALRHPVRQRFYALGLYVVMLIGAIVTAPFLALGPRKVAEFIPDSWDDALRF 197 Query 188 GYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTG 247 Y+P L + L V V +LYRV+LP PLPTHRL+ G++LA VFL+AT GLRVYL WIT TG Sbjct 198 AYFPVLFVALAVAVNVLYRVSLPKPLPTHRLLTGSLLAAGVFLVATWGLRVYLTWITSTG 257 Query 248 YTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKAR 301 YTYGALATPIAFLLFAFF GFAIM+GAELNAA++EEWPAP THA RL WLKA+ Sbjct 258 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAIEEEWPAPDTHAKRLHWWLKAK 311 >gi|169630108|ref|YP_001703757.1| ribonuclease BN [Mycobacterium abscessus ATCC 19977] gi|169242075|emb|CAM63103.1| Possible ribonuclease BN [Mycobacterium abscessus] Length=320 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 194/288 (68%), Positives = 231/288 (81%), Gaps = 0/288 (0%) Query 16 ITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSAL 75 + RRT KSWDDSIF++SAQAAFW LSLPPLLLG+LGSL +V PLFGPDTLP I++ + Sbjct 17 VMRRTAVKSWDDSIFAQSAQAAFWQVLSLPPLLLGILGSLTFVGPLFGPDTLPEIQERLV 76 Query 76 STAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQ 135 A+S FS SVV EIIEPTI DI + RGEV S+GF+ISLWAGSSAIS+FVD+VVEAHDQ Sbjct 77 RVANSVFSKSVVTEIIEPTIIDIMRDGRGEVVSIGFVISLWAGSSAISSFVDSVVEAHDQ 136 Query 136 TPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYGYYPALIL 195 TPLRHPVRQRFFAL LYV L V T P++ +GP++++E +P+S +LLRYGY+P L + Sbjct 137 TPLRHPVRQRFFALGLYVAALAMAVVTLPMVALGPKRIAEVVPDSWNSLLRYGYFPLLGI 196 Query 196 GLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALAT 255 L V LLYRV+LP PLP+HRL +GA+LA+ F IA+LGLR YL WIT TGYTYGALAT Sbjct 197 ALVALVTLLYRVSLPRPLPSHRLWIGALLAVTFFAIASLGLRFYLNWITGTGYTYGALAT 256 Query 256 PIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIG 303 PIAFLLFAF GFAI+LGAELNAA++E WPA ATHA +L WL + G Sbjct 257 PIAFLLFAFMLGFAIVLGAELNAAIEENWPAGATHARQLREWLSPQNG 304 >gi|289444249|ref|ZP_06433993.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289417168|gb|EFD14408.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=172 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 168/168 (100%), Positives = 168/168 (100%), Gaps = 0/168 (0%) Query 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP Sbjct 1 MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS Sbjct 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVV 168 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVV Sbjct 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVV 168 >gi|317506481|ref|ZP_07964282.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974] gi|316255242|gb|EFV14511.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974] Length=345 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 145/275 (53%), Positives = 189/275 (69%), Gaps = 4/275 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ R L+ SW+ SIF+ESA AAFW LSLPP+ LG+LG+L YV+P FGP L ++ Sbjct 21 RVVTRALAMSWEHSIFAESAGAAFWQILSLPPMFLGLLGTLGYVSPWFGPGVLEDVQHKI 80 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 L+ A S +VNE+I PT+ +T + R EV SL F++SLWAGSSAISAFVD++V AH+ Sbjct 81 LAFAQQALSQQLVNEVIRPTLMAVTAHGREEVTSLSFVLSLWAGSSAISAFVDSIVRAHN 140 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYGYY---- 190 QT LRHPVRQR FAL LY+V L + P++ V P +V+ +P+ +L Y Sbjct 141 QTELRHPVRQRIFALGLYIVFLACAMFALPLLSVTPHEVTTRLPQETHPVLSSAYNDLYG 200 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 PAL +G+T+ + YR+ALPVP RLV GAVLA+ FL+ GL YL W+T TGYTY Sbjct 201 PALFVGVTLFLSWFYRIALPVPPSWWRLVPGAVLAVLFFLVGRSGLLWYLNWVTSTGYTY 260 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWP 285 GALATPIA LL AFF G +++LGAELN+A++ WP Sbjct 261 GALATPIAMLLLAFFIGMSVILGAELNSAIEHFWP 295 >gi|333919429|ref|YP_004493010.1| hypothetical protein AS9A_1761 [Amycolicicoccus subflavus DQS3-9A1] gi|333481650|gb|AEF40210.1| Conserved hypothetical membrane protein [Amycolicicoccus subflavus DQS3-9A1] Length=378 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 171/302 (57%), Positives = 207/302 (69%), Gaps = 11/302 (3%) Query 8 PHRHHIWRITRRTLS-------KSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP 60 P R H W RRT K+WDDSIFS SA AAFW LSLPPL LG+LG L YV Sbjct 13 PARAHRWHPIRRTGQVIGRTTVKAWDDSIFSHSATAAFWQVLSLPPLFLGVLGMLGYVGD 72 Query 61 LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS 120 FGP+T+ IE ++ + + F+ SVV++II+PT+ D+ R E S+GF++SLWAGSS Sbjct 73 WFGPNTIDIIEGKIITFSGAVFNESVVDQIIQPTVNDVLVRGRLEFVSVGFVLSLWAGSS 132 Query 121 AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES 180 AISAFVDA+VEAH Q RHPV QR FAL LYVV L V T P++ +GP + + IP+S Sbjct 133 AISAFVDAIVEAHGQNEHRHPVWQRLFALLLYVVFLFLAVFTMPLVALGPALIMDLIPDS 192 Query 181 L----ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGL 236 + ++R YYPA+ + L G+ LY+VALP LP HRL+ GAVLA VF A+ GL Sbjct 193 WDHLGSEMVRTFYYPAVAVLLLFGLTTLYKVALPRSLPWHRLLAGAVLAGVVFYAASTGL 252 Query 237 RVYLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGN 296 RVYL ITRTGYTYGALATPIAFLLFAFF GFAIMLGAE NA +QE WPA AT ++ Sbjct 253 RVYLGAITRTGYTYGALATPIAFLLFAFFLGFAIMLGAEFNATIQEIWPARATRIEQVRR 312 Query 297 WL 298 WL Sbjct 313 WL 314 >gi|296393380|ref|YP_003658264.1| ribonuclease BN [Segniliparus rotundus DSM 44985] gi|296180527|gb|ADG97433.1| ribonuclease BN [Segniliparus rotundus DSM 44985] Length=344 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 142/275 (52%), Positives = 183/275 (67%), Gaps = 4/275 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ RTLS SW+ SIF+ESA AAFW LSL P+ LG+LG+L YV P FGP L ++ Sbjct 9 RVLGRTLSMSWEHSIFAESAGAAFWQILSLTPMFLGLLGTLGYVCPWFGPGVLEDVQHKI 68 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 LS A S +VNE+I PT+ +T N R V S FL+SLWAGSSAISAFVD++V AHD Sbjct 69 LSFAQQALSQKLVNEVIRPTLLAVTANGREAVTSFSFLLSLWAGSSAISAFVDSIVRAHD 128 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----LANLLRYGYY 190 QT LRHPVRQR +AL LY+V L+ + P++ V P +V+ +P ++++ Y Sbjct 129 QTELRHPVRQRIYALILYIVFLLSAMFALPILSVAPHQVTMRLPIETHPLVSSVYNNLYG 188 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P L + + + + Y +ALPVP P HRL+ GA+LA+ FL GL YL W+T TGYTY Sbjct 189 PGLFVAVALFLAWFYHIALPVPPPWHRLIPGALLAVMFFLAGRSGLLWYLNWVTSTGYTY 248 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWP 285 GALATPIA LL AFF G A++ GAELN+ V+ WP Sbjct 249 GALATPIALLLVAFFLGMAVIAGAELNSTVEHFWP 283 >gi|229491263|ref|ZP_04385089.1| ribonuclease BN [Rhodococcus erythropolis SK121] gi|229321802|gb|EEN87597.1| ribonuclease BN [Rhodococcus erythropolis SK121] Length=420 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 155/287 (55%), Positives = 202/287 (71%), Gaps = 4/287 (1%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RTLSK+WDDSIF ++A AAFW LSL PLLLG+LG + Y+ FGP+T+ IE ++ + Sbjct 31 RTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKIVTFS 90 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 + FS SVV++II PT+ D+ R E+ S+GFL+SLWAGSSAIS FVD++VEAH Q Sbjct 91 GTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHGQQDA 150 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL----ANLLRYGYYPALI 194 R+P+ QR FAL LYV+ LV V P++ +GP V +P S +NL+ YYPA+ Sbjct 151 RNPIWQRIFALLLYVMFLVMAVFILPLVALGPTLVGRALPASWYVVGSNLVDTFYYPAVG 210 Query 195 LGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALA 254 L + +G+ LY+VALP LP HRL+ GA++A F+ A+ GLR YL ++T TGYTYGALA Sbjct 211 LLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTGYTYGALA 270 Query 255 TPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKAR 301 TPIAFLLF FF GFA++LGAE NA VQE WPA AT ++ WL A+ Sbjct 271 TPIAFLLFTFFLGFAVVLGAEFNATVQEFWPARATRMEQMREWLAAQ 317 >gi|226306295|ref|YP_002766255.1| hypothetical protein RER_28080 [Rhodococcus erythropolis PR4] gi|226185412|dbj|BAH33516.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=415 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 155/287 (55%), Positives = 202/287 (71%), Gaps = 4/287 (1%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RTLSK+WDDSIF ++A AAFW LSL PLLLG+LG + Y+ FGP+T+ IE ++ + Sbjct 31 RTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKIVTFS 90 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 + FS SVV++II PT+ D+ R E+ S+GFL+SLWAGSSAIS FVD++VEAH Q Sbjct 91 GTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHGQQDA 150 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL----ANLLRYGYYPALI 194 R+P+ QR FAL LYV+ LV V P++ +GP V +P S +NL+ YYPA+ Sbjct 151 RNPIWQRIFALLLYVMFLVMAVFILPLVALGPTLVGRALPASWYVVGSNLVDTFYYPAVG 210 Query 195 LGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALA 254 L + +G+ LY+VALP LP HRL+ GA++A F+ A+ GLR YL ++T TGYTYGALA Sbjct 211 LLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTGYTYGALA 270 Query 255 TPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKAR 301 TPIAFLLF FF GFA++LGAE NA VQE WPA AT ++ WL A+ Sbjct 271 TPIAFLLFTFFLGFAVVLGAEFNATVQEFWPARATRMEQMREWLAAQ 317 >gi|300784486|ref|YP_003764777.1| ribonuclease BN [Amycolatopsis mediterranei U32] gi|299794000|gb|ADJ44375.1| ribonuclease BN [Amycolatopsis mediterranei U32] gi|340525907|gb|AEK41112.1| ribonuclease BN [Amycolatopsis mediterranei S699] Length=384 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/287 (52%), Positives = 198/287 (69%), Gaps = 4/287 (1%) Query 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDT 66 K R WR+ RT +K+W+ +IFSE+A+AAFW LSLPPLLLG+LGSL +V FG D Sbjct 11 KVARKGPWRLVTRTFAKAWEGNIFSEAAEAAFWQTLSLPPLLLGLLGSLGFVGEWFGQDV 70 Query 67 LPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFV 126 + A+ + + FS + V++IIEPT+ I +GE+ S+GFLISLWAGSSA+S+FV Sbjct 71 VAAVHDRIIGFCRTVFSANAVHDIIEPTVNSILTVGKGEIVSVGFLISLWAGSSAMSSFV 130 Query 127 DAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SLA 182 DA+ AHDQ +R+ V QR FAL LY+ LV LV P++ +GP + E P ++ Sbjct 131 DAITVAHDQYGVRNDVWQRIFALLLYLCGLVILVVGLPLLAIGPDLLPEFFPTAWRPTVT 190 Query 183 NLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAW 242 + + Y+PAL +T+ + LY++ALP LP HR + GAVLA+ VFL++++GLRVYL W Sbjct 191 SWVSALYFPALGAMITLALTTLYKLALPRKLPWHRGLPGAVLAMVVFLLSSVGLRVYLNW 250 Query 243 ITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPAT 289 IT+TGYTYGALA PIAFLL FF G A++ GA N+A+QE WPA AT Sbjct 251 ITKTGYTYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAKAT 297 >gi|302525720|ref|ZP_07278062.1| ribonuclease BN [Streptomyces sp. AA4] gi|302434615|gb|EFL06431.1| ribonuclease BN [Streptomyces sp. AA4] Length=412 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 143/287 (50%), Positives = 200/287 (70%), Gaps = 4/287 (1%) Query 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDT 66 K R WR+ RTL+K+WD +IFSE+A+AAFW LSLPPLLLG+LGS+ ++ FG + Sbjct 26 KTVRRGPWRLLTRTLAKAWDGNIFSEAAEAAFWQTLSLPPLLLGLLGSVGFIGEWFGQNV 85 Query 67 LPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFV 126 + A+ ++ +H+ FS + V EIIEPT+ I +GE+ S+GF+ISLWAGSSA+S+FV Sbjct 86 VTAVHDRIITFSHTIFSANAVQEIIEPTVNSILTVGKGEIVSVGFVISLWAGSSAMSSFV 145 Query 127 DAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIP----ESLA 182 DA+ AHDQ +R+ V QR FAL LY+ L+ LV P++ +GP + E P +++ Sbjct 146 DAITVAHDQYGVRNEVWQRIFALLLYLCALIGLVIGLPLLAIGPDLLPEFFPVDWRPTVS 205 Query 183 NLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAW 242 + + YYP L + + + + LY++ALP LP HR + GA+LA VFL++++GLR+YL W Sbjct 206 SWVGTLYYPVLGVMIALALTTLYKLALPRRLPWHRGLPGAMLAGVVFLVSSIGLRIYLNW 265 Query 243 ITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPAT 289 IT+TGYTYGALA PIAFLL FF G A++ GA N+A+QE WPA AT Sbjct 266 ITKTGYTYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAKAT 312 >gi|111023775|ref|YP_706747.1| hypothetical protein RHA1_ro06817 [Rhodococcus jostii RHA1] gi|110823305|gb|ABG98589.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=390 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 162/303 (54%), Positives = 207/303 (69%), Gaps = 7/303 (2%) Query 6 PKPHRHHIWR---ITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLF 62 P+P H + R + RT SK+WDDSIF ++A AAFW LSLPPLLLG+LG L YV F Sbjct 16 PRPGWHPLRRALSVIGRTASKAWDDSIFGKAATAAFWQTLSLPPLLLGLLGMLGYVGGWF 75 Query 63 GPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAI 122 GPDT+ I+ ++ + + FS SVV +II PT+GD+ R E+ SL FL+SLWAGSSAI Sbjct 76 GPDTVDIIQSKIINFSGTVFSDSVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAI 135 Query 123 SAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL- 181 S FVD++VEAH Q RHPV QR FAL LYV+ L+ V T P++ +GP V +PE+ Sbjct 136 STFVDSIVEAHGQQEARHPVWQRVFALLLYVMFLILAVFTLPLVALGPTLVGRVLPEAWR 195 Query 182 ---ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRV 238 ++ YYP + L L VG+ LY+VALP LP HRL+ GA++A FL A+ LR Sbjct 196 TIGTEIVDTFYYPGVGLLLIVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRR 255 Query 239 YLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWL 298 YL+W+ TGYTYGALATPIAFLLF FF GFA++LGAE NA VQE WPA AT ++ +W+ Sbjct 256 YLSWVAGTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPARATRIDQMRDWI 315 Query 299 KAR 301 A+ Sbjct 316 AAQ 318 >gi|226366211|ref|YP_002783994.1| hypothetical protein ROP_68020 [Rhodococcus opacus B4] gi|226244701|dbj|BAH55049.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=390 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 159/287 (56%), Positives = 200/287 (70%), Gaps = 4/287 (1%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RT SK+WDDSIF ++A AAFW LSLPPLLLG+LG L YV FGPDT+ I+ ++ + Sbjct 32 RTASKAWDDSIFGKAATAAFWQTLSLPPLLLGLLGMLGYVGGWFGPDTVDIIQSKIVNFS 91 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 + FS SVV +II PT+GD+ R E+ SL FL+SLWAGSSAIS FVD++VEAH Q Sbjct 92 GTVFSDSVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAISTFVDSIVEAHGQQEA 151 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL----ANLLRYGYYPALI 194 RHPV QR FAL LYV+ L+ V T P++ +GP V +PES ++ YYP + Sbjct 152 RHPVWQRVFALLLYVMFLILAVFTLPLVALGPTLVGRVLPESWRTIGTEIVDTFYYPGVG 211 Query 195 LGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALA 254 L L VG+ LY+VALP LP HRL+ GA++A FL A+ LR YL+W+ TGYTYGALA Sbjct 212 LLLIVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRRYLSWVAGTGYTYGALA 271 Query 255 TPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKAR 301 TPIAFLLF FF GFA++LGAE NA VQE WPA AT ++ +W+ A+ Sbjct 272 TPIAFLLFTFFLGFAVVLGAEFNATVQEFWPARATRIDQMRDWIAAQ 318 >gi|312139428|ref|YP_004006764.1| ribonuclease bn [Rhodococcus equi 103S] gi|325672683|ref|ZP_08152379.1| ribonuclease BN [Rhodococcus equi ATCC 33707] gi|311888767|emb|CBH48079.1| putative ribonuclease BN [Rhodococcus equi 103S] gi|325556560|gb|EGD26226.1| ribonuclease BN [Rhodococcus equi ATCC 33707] Length=369 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 161/304 (53%), Positives = 210/304 (70%), Gaps = 6/304 (1%) Query 7 KPHR--HHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGP 64 K HR ++ RT SK+WDDSIF +SA AAFW LSLPPLLLG+LGSL YV FGP Sbjct 8 KKHRPFKRCAQVVGRTASKAWDDSIFGKSATAAFWQTLSLPPLLLGLLGSLGYVGGWFGP 67 Query 65 DTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISA 124 +T+ I+ ++ +H+ FS +VV++II+PT+GD+ R E+ S+GFL+SLWAGSSAIS Sbjct 68 NTVEIIQSKIITFSHTVFSENVVDQIIQPTVGDVLGRGRPEIISVGFLLSLWAGSSAIST 127 Query 125 FVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL--- 181 FVD++VEAH Q RHPV QR FAL LYV L+ V T P++ +GP + +PES Sbjct 128 FVDSIVEAHGQQDARHPVWQRVFALLLYVGFLILAVFTLPLVALGPTIIGRVLPESWHTV 187 Query 182 -ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240 ++ YYPA+ L L +G+ LY+VALP LP HRL+ GA+LA F+ A+ LR YL Sbjct 188 GTEMVDAFYYPAVGLLLIIGLTTLYKVALPKSLPWHRLLGGALLAGVFFMAASTILRWYL 247 Query 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA 300 + I TGYTYGALATPIAFLLF FF GFA++LGAE NA +QE WPA AT ++ +W+ A Sbjct 248 SAIAGTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATIQEFWPARATRMEQVRDWIAA 307 Query 301 RIGV 304 + + Sbjct 308 QAAI 311 >gi|296139552|ref|YP_003646795.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162] gi|296027686|gb|ADG78456.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162] Length=404 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 155/288 (54%), Positives = 199/288 (70%), Gaps = 4/288 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 RI RT+ KSWDDSI +SAQAAFW LSLPPLLLG+LG YVA FGPDT+ I+ Sbjct 43 RIFWRTIVKSWDDSIIGQSAQAAFWQTLSLPPLLLGLLGLTGYVANWFGPDTIGVIQGKI 102 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 LS + S F+ SVV EII P + + + R ++ S+GF+I+LWAGSSA+S+FVD++ AHD Sbjct 103 LSFSESVFTESVVTEIIGPMVSGVLSEGRFDIVSIGFIIALWAGSSALSSFVDSICMAHD 162 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----LANLLRYGYY 190 Q +R+PV QRFFA+ LYV LV V T P++ +GP + +++P S +A L+ GY Sbjct 163 QHTVRNPVHQRFFAVLLYVEFLVIAVLTLPLVALGPTLIVKYMPASWHPAVARLIDVGYL 222 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P ++ L + LLYR ALP PLP +R V GA LA +FLIA+ GLRVYL+ I GY+Y Sbjct 223 PFVVALLVGALALLYRQALPRPLPWYRQVPGAALAALIFLIASTGLRVYLSLIATRGYSY 282 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWL 298 GALATPIAFLLF FF GFA+M+GAE NAA+Q WPA +L W+ Sbjct 283 GALATPIAFLLFTFFLGFAVMVGAEFNAALQARWPAREVRTDQLRGWV 330 >gi|256375638|ref|YP_003099298.1| ribonuclease BN [Actinosynnema mirum DSM 43827] gi|255919941|gb|ACU35452.1| ribonuclease BN [Actinosynnema mirum DSM 43827] Length=431 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 147/289 (51%), Positives = 196/289 (68%), Gaps = 5/289 (1%) Query 2 SDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPL 61 D P R + R+ RT++K+W+ +IFSE+A+AAFW LS PPLLLG+LGS+ YV Sbjct 12 QDDRSAPERRPL-RLVARTITKAWEGNIFSEAAEAAFWQVLSFPPLLLGLLGSIGYVGEW 70 Query 62 FGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSA 121 FGP+ + A+ +ST + FS VVN +I PT+ I +GE+ S+GFLISLWAGSSA Sbjct 71 FGPEVVQAVRDKIVSTCRTIFSGDVVNGVITPTVDQILTVGKGEIVSVGFLISLWAGSSA 130 Query 122 ISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESL 181 +++FVDAV AH Q +RH V QR FAL LYVV LV L+ PV+ +GP + +P+ Sbjct 131 MASFVDAVTVAHGQYGVRHEVWQRIFALLLYVVSLVLLIIGLPVLALGPDVLPRFLPDRW 190 Query 182 ANL----LRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLR 237 + L YYP + + L + + LY++ALP LP HRL GA LA+ VF+++++GLR Sbjct 191 QAVAEAWLSAFYYPVIGVLLVLALATLYKLALPRKLPWHRLAPGAALAMVVFILSSVGLR 250 Query 238 VYLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPA 286 +Y+ WIT TGYTYGALATPIAFLLF FF G AI +GA N+A+QE WPA Sbjct 251 LYIRWITTTGYTYGALATPIAFLLFVFFIGLAITIGAYFNSAIQEMWPA 299 >gi|54025740|ref|YP_119982.1| hypothetical protein nfa37700 [Nocardia farcinica IFM 10152] gi|54017248|dbj|BAD58618.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=374 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 153/285 (54%), Positives = 195/285 (69%), Gaps = 4/285 (1%) Query 22 SKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHSF 81 SK+W DSIF++SA AAFW LSL PLLLG+LGSL YV FGPDT+ +E L+ + Sbjct 52 SKAWTDSIFAKSATAAFWQTLSLAPLLLGLLGSLGYVGGWFGPDTVGIVESKILTFSRDL 111 Query 82 FSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPLRHP 141 FS +VV+E+I+PT+ D+ RG V S+GF++SLWAGSSA++ FVDA+VEAHDQ RHP Sbjct 112 FSEAVVSELIQPTVTDVLGRGRGAVVSVGFVLSLWAGSSAMATFVDAIVEAHDQQDARHP 171 Query 142 VRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIP----ESLANLLRYGYYPALILGL 197 V QR FAL LYV LV V P++ +GP + +P E L+ YYPA+ L L Sbjct 172 VWQRVFALLLYVQFLVAAVFILPLVALGPSLIGRILPGAWREPGLRLVDSFYYPAVGLLL 231 Query 198 TVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALATPI 257 VG+ LY+ AL LP HRL GA++A F+ A+ GLR YL+W+T TG +YGALATPI Sbjct 232 IVGLTTLYKAALHRSLPWHRLFGGALVAGVFFMAASEGLRRYLSWVTATGVSYGALATPI 291 Query 258 AFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARI 302 AFLLF FF GFA++LGAE NA VQE WPA AT ++ WL ++ Sbjct 292 AFLLFTFFLGFAVILGAEFNATVQEFWPARATRIEQMREWLANQV 336 >gi|257056430|ref|YP_003134262.1| hypothetical protein Svir_24410 [Saccharomonospora viridis DSM 43017] gi|256586302|gb|ACU97435.1| predicted membrane protein [Saccharomonospora viridis DSM 43017] Length=402 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 144/275 (53%), Positives = 195/275 (71%), Gaps = 4/275 (1%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RTLSK+W+ +IFSE+A+AAFW LSLPPLLLG+LGSL ++ FG + + ++ + Sbjct 32 RTLSKAWNGNIFSEAAEAAFWQTLSLPPLLLGLLGSLGFIGDWFGENVVRQAHDKIIAFS 91 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 + FS SVV +II PT+ DI +GE+ S+GFLISLWAGSSA+S+FVDA+ AHDQ + Sbjct 92 DTIFSDSVVQQIIAPTVDDILTTGKGEIVSVGFLISLWAGSSAMSSFVDAITVAHDQYGV 151 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SLANLLRYGYYPALI 194 R+ V QR FAL LY+ LV LV P++ +GP + E P+ ++A+ L YYP + Sbjct 152 RNEVWQRIFALLLYLGSLVLLVIGLPIIAIGPDLLPEFFPDDWKPTIASWLSVLYYPTVA 211 Query 195 LGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALA 254 + L + + LY++ALP LP HR + GAVLA+ +FL++++GLR Y++WIT TGYTYGALA Sbjct 212 VLLVLALATLYKLALPRKLPWHRGLPGAVLAMVIFLLSSVGLRFYISWITTTGYTYGALA 271 Query 255 TPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPAT 289 TPIAFLLF FF G AI+ GA N+A+QE WPA T Sbjct 272 TPIAFLLFTFFIGLAIVAGAYFNSAIQELWPAKMT 306 >gi|134098374|ref|YP_001104035.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] gi|291006924|ref|ZP_06564897.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] gi|133910997|emb|CAM01110.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338] Length=404 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 144/287 (51%), Positives = 204/287 (72%), Gaps = 4/287 (1%) Query 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDT 66 +P + R+ RT++K+W D+IFSESA AAFW LS+PPLLLG+LGS+ ++A FGP Sbjct 17 RPVKRGPLRLVWRTVTKAWWDNIFSESAAAAFWQTLSMPPLLLGLLGSIGFIADWFGPAV 76 Query 67 LPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFV 126 + A+ + L + + FS +VV++II PT+GDI R E+ S+GFL+SLWAGSSA+++ V Sbjct 77 IDAVHANILGFSRTVFSGNVVDQIIAPTVGDILTKGRTEIVSVGFLLSLWAGSSALASLV 136 Query 127 DAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGP----RKVSEHIPESLA 182 D++ A++Q +RH V QR FAL LY+V LV V PV+ +GP R V + + +A Sbjct 137 DSITLAYNQYMVRHSVWQRTFALLLYLVSLVLAVIGLPVIALGPDWLVRVVPQEFQDDVA 196 Query 183 NLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAW 242 L++ YYPA + L + + LY+V+LP LP HR + GA+LA+ VFL +++G+R+Y+AW Sbjct 197 WLIQVFYYPATGVLLVLALATLYKVSLPRKLPWHRGLPGALLAMLVFLCSSIGMRLYIAW 256 Query 243 ITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPAT 289 +T TGYTYGALATPIAFLLFAFF G AI++GA+ N A++E WPA T Sbjct 257 VTSTGYTYGALATPIAFLLFAFFIGMAIIIGAQFNNAIEEMWPAKMT 303 >gi|326384456|ref|ZP_08206136.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395] gi|326196801|gb|EGD53995.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395] Length=325 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 152/311 (49%), Positives = 210/311 (68%), Gaps = 9/311 (2%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ RT KSWDDSI +AQAAFW ALSLPPLLL +LGSL Y+ FGPDT+ I + Sbjct 7 RLAWRTTVKSWDDSIIGWAAQAAFWQALSLPPLLLAVLGSLGYIGGWFGPDTVEIITQRI 66 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 +S + F+PSVVN++IEPT+ ++ R + S+ F++SLWAGSSA+S FV ++V AH Sbjct 67 ISFSTHAFTPSVVNDLIEPTVENVLGRGRVTIMSVSFVMSLWAGSSAMSCFVSSIVHAHG 126 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SLANLLRYGYY 190 Q +RHPV QR FAL +Y+V LV V P++ +GP + E +P+ ++++L+ +GY+ Sbjct 127 QHEIRHPVWQRIFALLIYMVFLVSGVLVLPLVALGPTYLHEILPDAWDPAVSDLVDWGYF 186 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P + + L ++ LYR ALP P+P HRL+ GA+LA F IAT LR YL +TR GYTY Sbjct 187 PFVGVLLIGALVTLYRFALPYPMPWHRLLPGALLAGVFFWIATYVLRFYLTALTRAGYTY 246 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIGVGTTTYS 310 GALATPIAFLLF FF GFAI+LGAE+NA+++E WPA + NW+ ++ TT + Sbjct 247 GALATPIAFLLFTFFLGFAIVLGAEMNASIEELWPARGG-GGVVRNWVTSQ----TTELT 301 Query 311 STAQHSAVAAE 321 T ++ A+ Sbjct 302 DTLRNRALNGR 312 >gi|262202174|ref|YP_003273382.1| ribonuclease BN [Gordonia bronchialis DSM 43247] gi|262085521|gb|ACY21489.1| ribonuclease BN [Gordonia bronchialis DSM 43247] Length=426 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 149/291 (52%), Positives = 198/291 (69%), Gaps = 4/291 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ RT +WD I SAQAAFW ALSLPPLLLG+LGS+ Y+A FGPDT+ I + Sbjct 98 RLAWRTTVNAWDHGIVGWSAQAAFWQALSLPPLLLGLLGSVGYIAGWFGPDTVDVIYERI 157 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 +S A FS SVVN++I PT+ ++ N R + SLGF++SLWAGSSA+S F+ ++V AHD Sbjct 158 ISFADRTFSESVVNDLITPTVDNVLNRGRVGLVSLGFVLSLWAGSSAVSCFISSIVHAHD 217 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----LANLLRYGYY 190 Q +R+PV QR FAL LY+ L V P++ +GP + + +P+S + L+ GY+ Sbjct 218 QHEVRNPVWQRIFALLLYIGFLCAAVPLLPLVALGPNYLHDIVPQSWDPIITTLIDVGYF 277 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P + + L + LY +ALP PLP HRL+ GAVLA VF IA+ LR+YL +TR Y+Y Sbjct 278 PFVSVLLLGVLTTLYHLALPNPLPWHRLMGGAVLAGMVFWIASYILRIYLTAVTRADYSY 337 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKAR 301 GALATPIAFLLFAFF GFAI+LGAE NAAVQ WPA A+ ++ W+ ++ Sbjct 338 GALATPIAFLLFAFFLGFAIVLGAEFNAAVQALWPAKASATTQVREWVNSQ 388 >gi|284989615|ref|YP_003408169.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160] gi|284062860|gb|ADB73798.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160] Length=355 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 137/286 (48%), Positives = 190/286 (67%), Gaps = 4/286 (1%) Query 6 PKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPD 65 P R R+ RRT+ +W+D IF+ESA AAFW LSLPPLLLG+ G L YV FGPD Sbjct 20 PASRRSAAHRLVRRTMGNAWNDDIFTESAAAAFWQTLSLPPLLLGLFGILGYVGGAFGPD 79 Query 66 TLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAF 125 T+ A+++ + FS + ++EII PT+ D+ + AR EV S+GF++S W+GSSA+++F Sbjct 80 TIAAVQQWIIDLTGGVFSRNALDEIIAPTVADVLSTARAEVISVGFVLSFWSGSSAMASF 139 Query 126 VDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SL 181 VDA+ AHDQ +R+ + QR ++ +Y+V LV + P++ +GP +V +P+ S Sbjct 140 VDAITRAHDQYEVRNLIWQRTLSMLMYLVGLVTGILVLPLLALGPERVLPLLPDSWQHSA 199 Query 182 ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLA 241 + YYP L L L + + LYRVALP+ P +R + GA+LA VFL + GLR+YL Sbjct 200 GTAVDTVYYPVLGLVLLLALTTLYRVALPLKPPWYRGLPGALLAALVFLAGSSGLRLYLD 259 Query 242 WITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAP 287 W+T +GYTYGALA PIAFLL FF FAI+LGA+LNAA+Q WP P Sbjct 260 WLTGSGYTYGALAAPIAFLLATFFIAFAIILGAQLNAAIQALWPVP 305 >gi|331696938|ref|YP_004333177.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190] gi|326951627|gb|AEA25324.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190] Length=409 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 144/288 (50%), Positives = 190/288 (66%), Gaps = 5/288 (1%) Query 3 DQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLF 62 ++ P P R ++ RT+ +WDD+IFSESA AAFW LSLPPLLLG+LGSL Y+ F Sbjct 100 NEEPAPKRGAK-QLAVRTIVGAWDDNIFSESASAAFWQTLSLPPLLLGLLGSLGYIGEWF 158 Query 63 GPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAI 122 GP+T +E ++ F+ V++II PT+ I R E+ SLGF+ISLW+GSSA+ Sbjct 159 GPNTAQIVEARIIAATSGIFTRDAVDQIIAPTVSQILTTGRSELVSLGFVISLWSGSSAM 218 Query 123 SAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLA 182 S+FVDA+ AH Q +R+PV QR AL LYVV LV + + P++ +GP ++ +PES Sbjct 219 SSFVDAITRAHGQYGIRNPVWQRILALLLYVVALVGGIISLPLLALGPDRLPGILPESWR 278 Query 183 ----NLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRV 238 L+ YYP + + L + + LY+VALP P R + GA+LA VFL GLRV Sbjct 279 PAAITLIADLYYPVIGVILVLALTTLYKVALPAKPPWWRGLPGALLAAVVFLAGVTGLRV 338 Query 239 YLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPA 286 Y+ W+T TGYTYGALA PIAFLL AFF GFAI+LGA LNA++Q WPA Sbjct 339 YINWVTGTGYTYGALAAPIAFLLAAFFIGFAIVLGAHLNASIQALWPA 386 >gi|284991960|ref|YP_003410514.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160] gi|284065205|gb|ADB76143.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160] Length=354 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 121/279 (44%), Positives = 174/279 (63%), Gaps = 4/279 (1%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RT++K+W D I SA+AAFW LS+PPLL+G+LG+L Y+ G ++ IE + + Sbjct 58 RTVAKAWHDRILGLSAEAAFWQILSVPPLLIGLLGTLGYLGTFIGDASVARIEAELVRAS 117 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 +P VV +++PT+ DI + R ++ S+GFL+SLWAGSSA + F++ VV A+DQ + Sbjct 118 TEVLTPDVVEGLVQPTLDDILGSGRLDLVSVGFLLSLWAGSSATATFMNTVVIAYDQRDV 177 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLAN----LLRYGYYPALI 194 R P+R R AL+L+VV L+ V T P++V+G + +P L+ Y+P ++ Sbjct 178 RGPIRTRLKALWLFVVGLLLAVVTLPLLVLGRGVLVSLLPADWRGTATVLVNAVYWPVVL 237 Query 195 LGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGALA 254 +GL + + Y V LP LP HR + G VLA+A F++ L R Y+A I T YGALA Sbjct 238 VGLLLALTSFYHVVLPRRLPWHRHLPGTVLAVAFFVVTALATRTYVADILTTTLPYGALA 297 Query 255 TPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHR 293 TPIA LLF FF G +++LGAELNA +Q WPAP R Sbjct 298 TPIAVLLFCFFFGMSVLLGAELNATIQARWPAPLRRHQR 336 >gi|258653906|ref|YP_003203062.1| ribonuclease BN [Nakamurella multipartita DSM 44233] gi|258557131|gb|ACV80073.1| ribonuclease BN [Nakamurella multipartita DSM 44233] Length=356 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 125/298 (42%), Positives = 185/298 (63%), Gaps = 7/298 (2%) Query 8 PHRHHIWR-ITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGP-D 65 P H WR + RTLSK+W DS+F S+QAAFW ALS PLLL +LG + YV + P Sbjct 40 PRVRHRWRKVIGRTLSKAWGDSLFGMSSQAAFWCALSTAPLLLALLGLVGYVVGWYFPAG 99 Query 66 TLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAF 125 T+ + + L ++ F+ V + ++ T+ I + + +V S+G +ISLWAGSSA+SAF Sbjct 100 TIDQVREQILIFLNAIFNEEVADNLVGNTVETILSQGQADVVSVGLVISLWAGSSAMSAF 159 Query 126 VDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----L 181 V+++ A+ Q +RHPV +RFFAL LY++ L+ + P++ +GP + + PES + Sbjct 160 VESITIAYGQHEVRHPVAERFFALGLYLLALLSGIIMLPLLAIGPDYLPKVFPESWRPQV 219 Query 182 ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLA 241 +N++ YYP L LGL + +LY+VA P +R V GA LA AVF++ + GLR+YL+ Sbjct 220 SNIVNIAYYPTLALGLIFLLTVLYKVAPKHKHPWYRGVPGAFLAAAVFIVTSFGLRLYLS 279 Query 242 WITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLK 299 ++ G TYGALATPI FLLF +F A+++GA+ N A E +P P L W + Sbjct 280 YVYAHGLTYGALATPITFLLFYYFVSMAVIIGAQFNNATLEYYP-PRPSKRELRRWQR 336 >gi|258650769|ref|YP_003199925.1| ribonuclease BN [Nakamurella multipartita DSM 44233] gi|258553994|gb|ACV76936.1| ribonuclease BN [Nakamurella multipartita DSM 44233] Length=298 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 124/283 (44%), Positives = 176/283 (63%), Gaps = 10/283 (3%) Query 20 TLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAH 79 TL+K+W DS+F SAQAAFWSALS PLLL +LG YVA GP+T I + H Sbjct 19 TLAKAWGDSLFGMSAQAAFWSALSTAPLLLALLGLSGYVARAIGPNTTGEIREQVNVFLH 78 Query 80 SFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPLR 139 + F+ V + +I T+ I N+++ +V S+G +ISLWAGSSA++AFV+++ A+ Q R Sbjct 79 TIFNQEVADNLIGNTVDVILNSSQTDVVSVGLIISLWAGSSAMTAFVESIAIAYGQHEFR 138 Query 140 HPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIP----ESLANLLRYGYYPALIL 195 HPV +RFFAL LYV L + P++ +GP + P +++ ++ + YYP L + Sbjct 139 HPVLERFFALGLYVGALAAGIVMVPLLAIGPDYLPRLFPPDWRSAVSEIIGWLYYPGLAI 198 Query 196 GLTVGVILLYRVALPVPLPTHRLVL---GAVLAIAVFLIATLGLRVYLAWITRTGYTYGA 252 GL + + LY+VA P HR + GA LA AVFL A+ GLR+YL+++ G TYGA Sbjct 199 GLILLLTTLYKVA---PKDKHRWMRGLPGAFLAAAVFLTASTGLRLYLSYVYEHGLTYGA 255 Query 253 LATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLG 295 LATPI FLLF +F AI++GA+ N A+ E +P + R G Sbjct 256 LATPITFLLFYYFISMAIIIGAQFNNALLEYYPPRTSRRQRRG 298 >gi|158313101|ref|YP_001505609.1| ribonuclease BN [Frankia sp. EAN1pec] gi|158108506|gb|ABW10703.1| ribonuclease BN [Frankia sp. EAN1pec] Length=360 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/272 (37%), Positives = 159/272 (59%), Gaps = 4/272 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ R T++ +W + +A+A FW LS+PPLLL +LG++ Y+ L G D L + S Sbjct 64 RLARTTVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGTIGYIGDLLGGDALDNVRLSI 123 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 L A + + SVV++ + PTI +I + R +V S+GF++SLW GS+A++ FV+ + A+ Sbjct 124 LDGADNLLTASVVDDTVRPTIDEILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYG 183 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----LANLLRYGYY 190 Q LR VR R AL L++ + V P +V+GP +S+ + + +LL+ ++ Sbjct 184 QRELRSAVRSRLLALGLFLAQVATGVLLLPALVLGPGLLSDMLNSGRHPVVDDLLKILFW 243 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P + + + LY +ALPV R + GA LA+ ++L+ + LR+YL + Y Sbjct 244 PVVGVVSLAMLTTLYHLALPVRRSWRRALPGAALALFLWLVGSYLLRMYLELVFSNELVY 303 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQE 282 G+L P+A LLF + A++LGAELNAA+ E Sbjct 304 GSLGAPVAALLFFYITALAVLLGAELNAAIDE 335 >gi|288920775|ref|ZP_06415075.1| ribonuclease BN [Frankia sp. EUN1f] gi|288347851|gb|EFC82128.1| ribonuclease BN [Frankia sp. EUN1f] Length=367 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 101/277 (37%), Positives = 161/277 (59%), Gaps = 4/277 (1%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ R T++ +W + +A+A FW LS+PPLLL +LG++ Y+ G D + + +S Sbjct 80 RLARATVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGAIGYLGDTLGGDAVDNVRQSI 139 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 L A + + SVV+ + PTI I + R +V S+GFL+SLW GS+A++ FV+ + A+ Sbjct 140 LGGADNLLTASVVDGTVRPTIDQILSRGRPDVISIGFLLSLWTGSTAMATFVNTITIAYG 199 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SLANLLRYGYY 190 Q LR VR R AL+L++ + V P +V+GP +S+ + ++ LLR ++ Sbjct 200 QRDLRSAVRSRLLALWLFMAQVATGVILLPALVLGPSLLSDLLDAGRHPAVDELLRDVFW 259 Query 191 PALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTY 250 P + + + LY +ALP P R + GA LA+ ++L+ + LR+YL + Y Sbjct 260 PVVGVVALAMLTTLYHLALPQRRPWRRALPGAALALFLWLVGSYLLRMYLELVFSNELVY 319 Query 251 GALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAP 287 G+LA P+A LLF + A++LGAELNAA+ E P P Sbjct 320 GSLAAPVAALLFFYITALAVLLGAELNAALDERPPRP 356 >gi|86742177|ref|YP_482577.1| ribonuclease BN [Frankia sp. CcI3] gi|86569039|gb|ABD12848.1| ribonuclease BN [Frankia sp. CcI3] Length=342 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 104/273 (39%), Positives = 160/273 (59%), Gaps = 8/273 (2%) Query 19 RTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTA 78 RT++ +W + +A+A FW LSLPPLLL +LG+L YV G D L + +S L A Sbjct 56 RTITNAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGTLGYVGDAIGADALDSARQSILHGA 115 Query 79 HSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPL 138 + SVV++ + PTI I + R +V S+GF++SLW GS+A++ FV+ + A+ Q L Sbjct 116 GGLLTESVVDDAVRPTIDQILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYGQREL 175 Query 139 RHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES----LANLLRYGYYPALI 194 R VR R AL+L++ + V P +V+GP +S S ++ L+ Y+P + Sbjct 176 RSAVRSRLLALWLFLAQVASGVILLPALVLGPELISRIFDASRHPLVSTLITLLYWP--V 233 Query 195 LGLTVGVIL--LYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGA 252 +GL +L LY ++LPV P R + GA+LA+ +L+ + LR YL + YG+ Sbjct 234 VGLVALAMLTSLYHLSLPVRRPWWRALPGAILALVCWLVGSGVLRYYLEIVFSHELVYGS 293 Query 253 LATPIAFLLFAFFGGFAIMLGAELNAAVQEEWP 285 L +P+A LLF + A++LGAELNAA+ E+ P Sbjct 294 LGSPVAALLFFYITALAVLLGAELNAALDEQPP 326 >gi|111225044|ref|YP_715838.1| hypothetical protein FRAAL5685 [Frankia alni ACN14a] gi|111152576|emb|CAJ64318.1| Conserved hypothetical protein; putative membrane protein [Frankia alni ACN14a] Length=453 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 104/275 (38%), Positives = 161/275 (59%), Gaps = 8/275 (2%) Query 15 RITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSA 74 R+ R TL+ +W + +A+A FW LSLPPLLL +LG+L YVA G D L +I S Sbjct 86 RLARTTLANAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGALGYVADAIGGDALSSIRDSI 145 Query 75 LSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHD 134 L A + SVV++ + PT+ +I + R +V S+GF++SLW GS+A++ FV+ + A+ Sbjct 146 LRGAGDLLTESVVDDAVRPTVDEILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYG 205 Query 135 QTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPE----SLANLLRYGYY 190 Q R VR R AL L++ + V P +++GP +S + S+ +LL ++ Sbjct 206 QRDRRSAVRSRLVALGLFLAQVTSGVIILPALILGPGLISRILDADQHPSVDHLLTLLFW 265 Query 191 PALILGLTVGVIL--LYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGY 248 P ++GL +L LY ++LPV P R + GA LA+ +L+ + LR+YL + Sbjct 266 P--VVGLVALTMLTSLYHLSLPVRRPWWRALPGATLALVCWLVGSDVLRLYLEIVFSHEL 323 Query 249 TYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEE 283 YG+L P+A LLF + A++LGAELNAA+ E+ Sbjct 324 VYGSLGAPVAALLFFYITALAVLLGAELNAALDEQ 358 >gi|302541789|ref|ZP_07294131.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302459407|gb|EFL22500.1| putative integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length=390 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 108/313 (35%), Positives = 169/313 (54%), Gaps = 3/313 (0%) Query 14 WRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKS 73 W + + T++ + + +A+AAF++ LSLPPLLLG++G L Y DT+ I ++ Sbjct 3 WLLLKDTVNSCMEYRVTGLAAEAAFFTLLSLPPLLLGLIGLLGYFDAWTDTDTVATIRQN 62 Query 74 ALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAH 133 L + + S V EI P + D+ R +V SLGF I+LW+GS A++ FVD + + Sbjct 63 ILDASGTVLSDKGVKEIARPLLDDVIEGGRPDVISLGFGIALWSGSRAVNVFVDTITIMY 122 Query 134 DQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYGYYPAL 193 R VR R A LY+V LV P+MV+GP V + +P S A L+R Y+P + Sbjct 123 GLEGRRGIVRTRLLAFLLYLVALVIGAVALPLMVIGPETVVDFVPSS-ATLVRVLYWPTV 181 Query 194 ILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGAL 253 IL + LY V++PV + GA++A+ ++++ + LR+YL YG+L Sbjct 182 ILLSVAFLTTLYHVSVPVRSAWREDIPGALVALTMWVLGSFLLRIYLIHTVEGPTIYGSL 241 Query 254 ATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGN--WLKARIGVGTTTYSS 311 A P+A LL+ FA+++GA +NAA+ WP+ AT A R W + + +G Sbjct 242 AAPVAVLLWIGVSAFAVLVGAAVNAAIDRVWPSVATAAGRAQREAWTREQAALGRAREQR 301 Query 312 TAQHSAVAAEPPS 324 TA + + PPS Sbjct 302 TADDGSAESTPPS 314 >gi|320007739|gb|ADW02589.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331] Length=350 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 105/280 (38%), Positives = 162/280 (58%), Gaps = 1/280 (0%) Query 14 WRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKS 73 W++ + T++ + I +A+AAF++ LSLPPLLLG++G L YV T+ +IE++ Sbjct 3 WQLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDDWTSTTTVASIERN 62 Query 74 ALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAH 133 L + S VN+I +P I D+T AR +V SLGF I+LW+GS A++ F+D + + Sbjct 63 ILGAVQTVLSERGVNDIAKPLIADVTTGARPDVISLGFAIALWSGSRAVNVFIDTITVMY 122 Query 134 DQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYGYYPAL 193 R V+ R A LYVV L+ P++VVGP +V E +P +L Y+P + Sbjct 123 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGPDRVVEFVPWG-TEVLAVMYWPLV 181 Query 194 ILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGYTYGAL 253 IL + LY V++PV P V GA++A+ ++++ + LR+YL YG+L Sbjct 182 ILLSIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPTIYGSL 241 Query 254 ATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHR 293 A PIA LL+ FA+++GA +NAA+ WP+ AT A R Sbjct 242 AAPIAVLLWIGISAFAVLVGAAVNAAIDRVWPSLATAAAR 281 >gi|297191204|ref|ZP_06908602.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150821|gb|EDY62426.2| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length=370 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 93/278 (34%), Positives = 159/278 (58%), Gaps = 1/278 (0%) Query 9 HRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLP 68 R +W + + T++ + I +A+AAF++ LS+PPL+LG++G L Y+ T+ Sbjct 27 KRKMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSVPPLMLGLIGLLGYIDDWTNTTTVA 86 Query 69 AIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDA 128 +IE++ L+ + S VN+I +P + D+T R ++ S+GF I+LW+GS A++ F+D Sbjct 87 SIEENILTAVGTVLSDRGVNDIAKPLLEDVTQGGRPDLISIGFAIALWSGSRAVNVFIDT 146 Query 129 VVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYG 188 + + R V R A LY+V L+ P+ VVGP +V E +P ++R Sbjct 147 ITVMYGLDGHRGIVATRLLAFLLYIVALLIGAVVLPLAVVGPDRVVELMPWG-TEVVRIL 205 Query 189 YYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGY 248 Y+P ++L + LY V++PV P + GA++A+ ++++ + LR+YL Sbjct 206 YWPVVMLLSIAFLTTLYHVSVPVRSPWVEDIPGALVALGMWILGSFLLRIYLTSQVEGPT 265 Query 249 TYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPA 286 YG+LA PIAFLL+ FA+++GA +NAA+ WP+ Sbjct 266 IYGSLAAPIAFLLWIGISAFAVLVGAAVNAAIDRVWPS 303 >gi|345002845|ref|YP_004805699.1| ribonuclease BN [Streptomyces sp. SirexAA-E] gi|344318471|gb|AEN13159.1| ribonuclease BN [Streptomyces sp. SirexAA-E] Length=399 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/278 (38%), Positives = 161/278 (58%), Gaps = 1/278 (0%) Query 9 HRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLP 68 R WR+ + T++ + I +A+AAF++ LSLPPLLLG++G L YV T+ Sbjct 27 KRQMAWRLIKDTVNSCMEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDEWTSTTTVA 86 Query 69 AIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDA 128 +IE++ LS + S VN+I +P + D+T AR +V S+GF I+LW+GS A++ F++ Sbjct 87 SIERNILSAVQTVLSERGVNDIAKPLLEDVTTGARPDVISIGFAIALWSGSRAVNVFIET 146 Query 129 VVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYG 188 + + R V+ R A LYVV LV P++VVGP +V E +P LL Sbjct 147 ITVMYGLDGHRGIVKTRLLAFLLYVVALVLGSVVLPLLVVGPDRVVEFVPWG-TELLAVL 205 Query 189 YYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGY 248 Y+P +I+ + LY V++PV P V GA++A+A++++ + LR+YL Sbjct 206 YWPLVIVLSIAFLTTLYHVSVPVRSPWMEDVPGALVALAMWVLGSFLLRIYLTSTVEGPT 265 Query 249 TYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPA 286 YG+LA PIA LL+ FA+++GA +NAA+ WP+ Sbjct 266 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDRVWPS 303 >gi|312195054|ref|YP_004015115.1| ribonuclease BN [Frankia sp. EuI1c] gi|311226390|gb|ADP79245.1| ribonuclease BN [Frankia sp. EuI1c] Length=452 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/289 (37%), Positives = 165/289 (58%), Gaps = 7/289 (2%) Query 9 HRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLP 68 H R+ R +S +W D + +A+A FW LSLPPLLL +LGS+ Y+ G D + Sbjct 126 HAADAGRVAARAMSNAWRDRVLGLAAEAGFWQLLSLPPLLLALLGSIGYLGDALGSDAVN 185 Query 69 AIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDA 128 +I S L A + VV++++ PT+ I + R +V S+GF++SLW GS+A++ FV+ Sbjct 186 SIRNSLLRGADDLLTADVVDDVVRPTVDQILTHGRPDVISIGFVLSLWTGSTAMATFVNT 245 Query 129 VVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSE-----HIPESLAN 183 + A+ Q LR VR R AL L+++ ++ + P +V+GP ++E H P ++ Sbjct 246 ITIAYGQRDLRSAVRSRIVALRLFIIQVITGIILLPALVLGPGLLAELLRAKHHP-TIEL 304 Query 184 LLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWI 243 LL+ ++P + + + LY ALP P R + GAV A+ +L+ + LR+YL + Sbjct 305 LLKSAFWPVVAVVALTVLTSLYHQALPQRRPWRRALPGAVFALVGWLVGSYVLRLYLERV 364 Query 244 TRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWP-APATHA 291 YG+LA P A LLF + G A++LGAELNAA+ + P APA A Sbjct 365 FGNELVYGSLAAPAAALLFFYITGLAVLLGAELNAALDQRRPGAPAPEA 413 >gi|328885970|emb|CCA59209.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length=374 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/281 (36%), Positives = 159/281 (57%), Gaps = 1/281 (0%) Query 9 HRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLP 68 R +W + + T++ + I +A+AAF++ LSLPPLLLG++ L Y DT+ Sbjct 31 KRKMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIAVLGYADDWTNTDTVA 90 Query 69 AIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDA 128 +I ++ L A + S V EI EP + DIT R ++ SLGF I+LW+GS A++ F+D Sbjct 91 SIRENILHAAGTVLSDRGVREIAEPLLDDITQGKRPDLISLGFAIALWSGSRAVNVFIDT 150 Query 129 VVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRYG 188 + + R V+ R AL LY+V L+ P+ VVGP +V E +P ++ Sbjct 151 ITVMYGLDGHRGIVKTRLLALLLYIVALLIGAIVLPLAVVGPDRVVELVPWG-TEVVSVL 209 Query 189 YYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTGY 248 Y+PA+IL + LY V++PV P + GA++A+ ++++ + LR+YL Sbjct 210 YWPAVILLSIAFLTTLYHVSVPVRSPWIEDIPGALVALGMWVLGSFLLRIYLTSQVEGPT 269 Query 249 TYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPAT 289 YG+LA PIA LL+ FA+++GA +NAA+ WP+ AT Sbjct 270 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDRVWPSVAT 310 >gi|84496269|ref|ZP_00995123.1| putative integral membrane protein [Janibacter sp. HTCC2649] gi|84383037|gb|EAP98918.1| putative integral membrane protein [Janibacter sp. HTCC2649] Length=381 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 85/286 (30%), Positives = 156/286 (55%), Gaps = 1/286 (0%) Query 8 PHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTL 67 P + R+T T+ + +++A F++ LSLPPL+LG+ G + Y+ G DT+ Sbjct 16 PALESLARLTVETIRICLRYRVTGLASEAGFFALLSLPPLVLGLFGGVGYIGRWLGQDTV 75 Query 68 PAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVD 127 + ++ A F + V++ + PT+ D+ R ++ S+GF++SLW+GS A++ VD Sbjct 76 ATVREAITEYAARFLTDDVISSTLAPTVDDVFTAGRFDLISVGFVLSLWSGSRALNVLVD 135 Query 128 AVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPESLANLLRY 187 V + Q+ +R V R + LY+V LV + T P++++GP + E +P++ + L + Sbjct 136 TVSIMYGQSGVRGIVPTRVLSFSLYIVALVVGIITIPLVLIGPTLLGEVLPDTW-DFLTF 194 Query 188 GYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLAWITRTG 247 Y+P + L + LY V+ P+ P R + GAVL + ++++A+ +R +A Sbjct 195 LYWPVVSLVVIAAFTSLYHVSTPLRSPWTRDIPGAVLTLLIWVVASFAVRGSIAASLGGT 254 Query 248 YTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHR 293 YG L+ PI L++ + A+++GA LNA ++ WP+ R Sbjct 255 SIYGPLSAPIVLLIWLYMLAIAVLIGAALNAGIRNLWPSGEQRGLR 300 Lambda K H 0.324 0.137 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 574046524410 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40