BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2711 Length=230 Score E Sequences producing significant alignments: (Bits) Value gi|15609848|ref|NP_217227.1| IRON-dependent repressor and activa... 456 1e-126 gi|13399468|pdb|1FX7|A Chain A, Crystal Structure Of The Iron-De... 452 1e-125 gi|240169687|ref|ZP_04748346.1| iron-dependent repressor and act... 438 4e-121 gi|183982016|ref|YP_001850307.1| iron-dependent repressor and ac... 429 1e-118 gi|118618674|ref|YP_907006.1| iron-dependent repressor and activ... 428 3e-118 gi|118465346|ref|YP_882781.1| iron-dependent repressor IdeR [Myc... 427 6e-118 gi|260100674|gb|ACX31576.1| iron-dependent regulator [Mycobacter... 424 4e-117 gi|296171821|ref|ZP_06852935.1| iron-dependent repressor IdeR [M... 423 1e-116 gi|15827486|ref|NP_301749.1| iron dependent repressor [Mycobacte... 420 9e-116 gi|254821658|ref|ZP_05226659.1| iron-dependent repressor IdeR [M... 417 7e-115 gi|342858421|ref|ZP_08715076.1| iron-dependent repressor IdeR [M... 416 2e-114 gi|108799143|ref|YP_639340.1| DtxR family iron dependent repress... 401 3e-110 gi|333991093|ref|YP_004523707.1| iron-dependent repressor and ac... 400 1e-109 gi|145224530|ref|YP_001135208.1| iron dependent repressor [Mycob... 395 2e-108 gi|120403440|ref|YP_953269.1| iron dependent repressor [Mycobact... 395 3e-108 gi|118468273|ref|YP_887081.1| iron-dependent repressor IdeR [Myc... 394 5e-108 gi|1171105|gb|AAA86056.1| similar to the Corynebacterium dipther... 392 2e-107 gi|169630112|ref|YP_001703761.1| Iron-dependent repressor IdeR [... 376 1e-102 gi|54025749|ref|YP_119991.1| putative transcriptional regulator ... 342 2e-92 gi|262202168|ref|YP_003273376.1| iron dependent repressor [Gordo... 342 2e-92 gi|312139421|ref|YP_004006757.1| dtxr-like transcriptional regul... 342 3e-92 gi|226306288|ref|YP_002766248.1| iron-dependent regulator IdeR [... 342 4e-92 gi|111023768|ref|YP_706740.1| Fe(2+)-dependent transcriptional r... 341 6e-92 gi|10334814|gb|AAG16749.1|AF277002_1 iron dependent regulatory p... 340 8e-92 gi|226366204|ref|YP_002783987.1| iron-dependent regulator IdeR [... 340 1e-91 gi|296139545|ref|YP_003646788.1| DtxR family iron (metal) depend... 334 5e-90 gi|343926979|ref|ZP_08766467.1| iron-dependent regulator IdeR [G... 327 8e-88 gi|326384466|ref|ZP_08206146.1| iron dependent repressor [Gordon... 325 4e-87 gi|317506477|ref|ZP_07964278.1| iron dependent repressor protein... 318 4e-85 gi|333919421|ref|YP_004493002.1| Fe(2+)-dependent transcriptiona... 317 1e-84 gi|296393376|ref|YP_003658260.1| DtxR family iron (metal) depend... 315 4e-84 gi|134104578|pdb|2ISZ|A Chain A, Crystal Structure Of A Two-Doma... 283 1e-74 gi|6573375|pdb|1B1B|A Chain A, Iron Dependent Regulator 282 3e-74 gi|134104576|pdb|2ISY|A Chain A, Crystal Structure Of The Nickel... 280 1e-73 gi|291006941|ref|ZP_06564914.1| DtxR family iron dependent repre... 278 3e-73 gi|256375602|ref|YP_003099262.1| iron (metal) dependent represso... 276 2e-72 gi|302525550|ref|ZP_07277892.1| transcriptional regulatory prote... 274 7e-72 gi|300784323|ref|YP_003764614.1| Mn-dependent transcriptional re... 273 1e-71 gi|257056727|ref|YP_003134559.1| Mn-dependent transcriptional re... 271 7e-71 gi|325001196|ref|ZP_08122308.1| Mn-dependent transcriptional reg... 268 4e-70 gi|337766396|emb|CCB75107.1| Iron-dependent repressor ideR [Stre... 267 1e-69 gi|239989835|ref|ZP_04710499.1| putative iron dependent regulato... 265 3e-69 gi|319948425|ref|ZP_08022563.1| putative transcriptional regulat... 265 3e-69 gi|331697763|ref|YP_004334002.1| iron (metal) dependent represso... 265 4e-69 gi|182436865|ref|YP_001824584.1| putative iron dependent regulat... 264 8e-69 gi|297158272|gb|ADI07984.1| putative iron dependent regulatory p... 263 2e-68 gi|29830398|ref|NP_825032.1| iron dependent regulatory protein [... 261 5e-68 gi|256833203|ref|YP_003161930.1| iron (metal) dependent represso... 261 7e-68 gi|328884256|emb|CCA57495.1| Iron-dependent repressor IdeR or Dt... 261 8e-68 gi|172040573|ref|YP_001800287.1| iron-dependent repressor DtxR [... 261 8e-68 >gi|15609848|ref|NP_217227.1| IRON-dependent repressor and activator IDER [Mycobacterium tuberculosis H37Rv] gi|15842249|ref|NP_337286.1| iron-dependent repressor IdeR [Mycobacterium tuberculosis CDC1551] gi|31793883|ref|NP_856376.1| IRON-dependent repressor and activator IDER [Mycobacterium bovis AF2122/97] 83 more sequence titles Length=230 Score = 456 bits (1172), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 230/230 (100%), Positives = 230/230 (100%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 >gi|13399468|pdb|1FX7|A Chain A, Crystal Structure Of The Iron-Dependent Regulator (Ider) From Mycobacterium Tuberculosis gi|13399469|pdb|1FX7|B Chain B, Crystal Structure Of The Iron-Dependent Regulator (Ider) From Mycobacterium Tuberculosis gi|13399470|pdb|1FX7|C Chain C, Crystal Structure Of The Iron-Dependent Regulator (Ider) From Mycobacterium Tuberculosis 9 more sequence titles Length=230 Score = 452 bits (1164), Expect = 1e-125, Method: Compositional matrix adjust. Identities = 229/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL ELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLDELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 >gi|240169687|ref|ZP_04748346.1| iron-dependent repressor and activator IdeR [Mycobacterium kansasii ATCC 12478] Length=230 Score = 438 bits (1126), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 220/230 (96%), Positives = 227/230 (99%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE GA+DANLVRLTELPAG PVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPEFGAEDANLVRLTELPAGPPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVET+PGGGVTIVIPGHENVTLPH MAHAVKVEKV Sbjct 181 ITRLKDAGVVPNARVTVETSPGGGVTIVIPGHENVTLPHAMAHAVKVEKV 230 >gi|183982016|ref|YP_001850307.1| iron-dependent repressor and activator IdeR [Mycobacterium marinum M] gi|183175342|gb|ACC40452.1| iron-dependent repressor and activator IdeR [Mycobacterium marinum M] Length=230 Score = 429 bits (1104), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 213/230 (93%), Positives = 225/230 (98%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE + +ANLVRLTELP+GSPVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPESDSYEANLVRLTELPSGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I+RLKDAGVVPNARVTVET+P GGVTI+IPGHENVTLPH MAHAVKVEKV Sbjct 181 ISRLKDAGVVPNARVTVETSPAGGVTILIPGHENVTLPHAMAHAVKVEKV 230 >gi|118618674|ref|YP_907006.1| iron-dependent repressor and activator IdeR [Mycobacterium ulcerans Agy99] gi|118570784|gb|ABL05535.1| iron-dependent repressor and activator IdeR [Mycobacterium ulcerans Agy99] Length=230 Score = 428 bits (1100), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 212/230 (93%), Positives = 225/230 (98%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE + +ANLVRLTELP+GSPVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPESDSYEANLVRLTELPSGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I+RLKDAGVVPNARVTVET+P GGVTI+IPGHENVTLPH MA+AVKVEKV Sbjct 181 ISRLKDAGVVPNARVTVETSPAGGVTILIPGHENVTLPHAMAYAVKVEKV 230 >gi|118465346|ref|YP_882781.1| iron-dependent repressor IdeR [Mycobacterium avium 104] gi|254776044|ref|ZP_05217560.1| iron-dependent repressor IdeR [Mycobacterium avium subsp. avium ATCC 25291] gi|118166633|gb|ABK67530.1| iron-dependent repressor IdeR [Mycobacterium avium 104] gi|260100676|gb|ACX31577.1| iron-dependent regulator [Mycobacterium avium subsp. paratuberculosis] gi|336458793|gb|EGO37750.1| Mn-dependent transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=229 Score = 427 bits (1098), Expect = 6e-118, Method: Compositional matrix adjust. Identities = 215/230 (94%), Positives = 225/230 (98%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE GA++ANLVRLTELP+G+PVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPESGAEEANLVRLTELPSGAPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I+RLKDAGVVPNARVTVET P GVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ISRLKDAGVVPNARVTVETGP-AGVTIVIPGHENVTLPHEMAHAVKVEKV 229 >gi|260100674|gb|ACX31576.1| iron-dependent regulator [Mycobacterium avium subsp. paratuberculosis] Length=229 Score = 424 bits (1090), Expect = 4e-117, Method: Compositional matrix adjust. Identities = 214/230 (94%), Positives = 224/230 (98%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVI LPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIRLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE GA++ANLVRLTELP+G+PVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPESGAEEANLVRLTELPSGAPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I+RLKDAGVVPNARVTVET P GVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ISRLKDAGVVPNARVTVETGP-AGVTIVIPGHENVTLPHEMAHAVKVEKV 229 >gi|296171821|ref|ZP_06852935.1| iron-dependent repressor IdeR [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893957|gb|EFG73725.1| iron-dependent repressor IdeR [Mycobacterium parascrofulaceum ATCC BAA-614] Length=229 Score = 423 bits (1087), Expect = 1e-116, Method: Compositional matrix adjust. Identities = 215/230 (94%), Positives = 224/230 (98%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALAIAVMRKHRLAERLLVDVIG+PWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAIAVMRKHRLAERLLVDVIGVPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 N+PTTSPFGNPIPGL++LGVGP+ GADDA+LVRLTELP GSPVAVVVRQLTEHVQGDIDL Sbjct 121 NHPTTSPFGNPIPGLLDLGVGPDSGADDADLVRLTELPPGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVET P GVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ITRLKDAGVVPNARVTVETGP-AGVTIVIPGHENVTLPHEMAHAVKVEKV 229 >gi|15827486|ref|NP_301749.1| iron dependent repressor [Mycobacterium leprae TN] gi|221229963|ref|YP_002503379.1| iron dependent repressor [Mycobacterium leprae Br4923] gi|20532135|sp|Q9CCB5.1|IDER_MYCLE RecName: Full=Iron-dependent repressor IdeR gi|13093036|emb|CAC31394.1| iron dependent repressor [Mycobacterium leprae] gi|219933070|emb|CAR71108.1| iron dependent repressor [Mycobacterium leprae Br4923] Length=230 Score = 420 bits (1079), Expect = 9e-116, Method: Compositional matrix adjust. Identities = 207/230 (90%), Positives = 219/230 (96%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLLRVAG+R Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGNR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT KGRA+AIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRL+KVL Sbjct 61 HLELTTKGRAMAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLIKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LG GP+ A +A LVRLTELP+GSPVAVVVRQLTEHVQ DIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGAGPDASAANAKLVRLTELPSGSPVAVVVRQLTEHVQDDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKD GVVPNARVTVET+P G V I+IPGHENVTLPHEMAHAVKVEKV Sbjct 181 ITRLKDTGVVPNARVTVETSPAGNVIIIIPGHENVTLPHEMAHAVKVEKV 230 >gi|254821658|ref|ZP_05226659.1| iron-dependent repressor IdeR [Mycobacterium intracellulare ATCC 13950] Length=229 Score = 417 bits (1071), Expect = 7e-115, Method: Compositional matrix adjust. Identities = 212/230 (93%), Positives = 222/230 (97%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIG+PWEEVHAEACRWEHVMSE+VERRLVKVL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGVPWEEVHAEACRWEHVMSEEVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 N+PTTSPFGNPIPGL++LGVGPE GA++A LVRLTELP GSPVAVVVRQLTEHVQGD DL Sbjct 121 NHPTTSPFGNPIPGLLDLGVGPESGAEEAILVRLTELPPGSPVAVVVRQLTEHVQGDTDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVET P GVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ITRLKDAGVVPNARVTVETGP-AGVTIVIPGHENVTLPHEMAHAVKVEKV 229 >gi|342858421|ref|ZP_08715076.1| iron-dependent repressor IdeR [Mycobacterium colombiense CECT 3035] gi|342134125|gb|EGT87305.1| iron-dependent repressor IdeR [Mycobacterium colombiense CECT 3035] Length=229 Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 211/230 (92%), Positives = 220/230 (96%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALAI+VMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTDKGRALAISVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL++LGVGPE ++D LVRLTELPAG+PVAVVVRQLTEHVQGDIDL Sbjct 121 NNPTTSPFGNPIPGLLDLGVGPESWSEDGPLVRLTELPAGAPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I+RLKDAGVVPNARVTVE GVTIVIPGHENVTLPHEMAHAVKVEKV Sbjct 181 ISRLKDAGVVPNARVTVENG-AAGVTIVIPGHENVTLPHEMAHAVKVEKV 229 >gi|108799143|ref|YP_639340.1| DtxR family iron dependent repressor [Mycobacterium sp. MCS] gi|119868258|ref|YP_938210.1| iron dependent repressor [Mycobacterium sp. KMS] gi|126434751|ref|YP_001070442.1| iron dependent repressor [Mycobacterium sp. JLS] gi|108769562|gb|ABG08284.1| iron (metal) dependent repressor, DtxR family [Mycobacterium sp. MCS] gi|119694347|gb|ABL91420.1| iron dependent repressor [Mycobacterium sp. KMS] gi|126234551|gb|ABN97951.1| iron dependent repressor [Mycobacterium sp. JLS] Length=230 Score = 401 bits (1031), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 204/230 (89%), Positives = 211/230 (92%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGV PLRARIAERLDQSGPTVSQTVSRMERDGLL+VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLQVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLV+VL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVQVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +NPTTSPFGNPIPGL ELG+ A+ NLVRLTELPAG PVAVVVRQLTEHVQGD DL Sbjct 121 DNPTTSPFGNPIPGLSELGLDSLSRAEVVNLVRLTELPAGMPVAVVVRQLTEHVQGDADL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RLKDAGVVPNARVTVE+ GGV IVIPGHE V LPH MAHAVKVEKV Sbjct 181 IARLKDAGVVPNARVTVESADHGGVNIVIPGHEQVELPHHMAHAVKVEKV 230 >gi|333991093|ref|YP_004523707.1| iron-dependent repressor and activator IdeR [Mycobacterium sp. JDM601] gi|333487061|gb|AEF36453.1| iron-dependent repressor and activator IdeR [Mycobacterium sp. JDM601] Length=230 Score = 400 bits (1027), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 201/230 (88%), Positives = 215/230 (94%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERL+QSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALA++VMRKHRLAERLLVD+IGLP EEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAVSVMRKHRLAERLLVDIIGLPLEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +NPTTSPFGNPIPGL +LG G + G + +LVRLTELPAGSPVAVVVRQLTEHVQGDIDL Sbjct 121 DNPTTSPFGNPIPGLPDLGFGSDAGPRETDLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ITRLKDAGVVPNARVTVE GVTIV+PGH +V+LP+ MAHAVKV+KV Sbjct 181 ITRLKDAGVVPNARVTVEADAEDGVTIVMPGHTDVSLPYAMAHAVKVQKV 230 >gi|145224530|ref|YP_001135208.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK] gi|315444861|ref|YP_004077740.1| Mn-dependent transcriptional regulator [Mycobacterium sp. Spyr1] gi|145217016|gb|ABP46420.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK] gi|315263164|gb|ADT99905.1| Mn-dependent transcriptional regulator [Mycobacterium sp. Spyr1] Length=229 Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 202/230 (88%), Positives = 211/230 (92%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEE V PLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEECVIPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMS DVERRLV+VL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSVDVERRLVQVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL ELGVG E G + +LVRLTELPAG PVAVVVRQLTEHVQGD++L Sbjct 121 NNPTTSPFGNPIPGLSELGVGDESG-EAMSLVRLTELPAGMPVAVVVRQLTEHVQGDVEL 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RLKDAGVVPNARVTVE GGV IVIPGHE V LPHEMAHAV+VEKV Sbjct 180 IARLKDAGVVPNARVTVENNDHGGVMIVIPGHEQVELPHEMAHAVRVEKV 229 >gi|120403440|ref|YP_953269.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1] gi|119956258|gb|ABM13263.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1] Length=229 Score = 395 bits (1015), Expect = 3e-108, Method: Compositional matrix adjust. Identities = 203/230 (89%), Positives = 210/230 (92%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGV PLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVIPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALA+AVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMS DVERRLV+VL Sbjct 61 HLELTEKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSVDVERRLVQVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL ELGVG E + ++VRLTELPAG PVAVVVRQLTEHVQGD +L Sbjct 121 NNPTTSPFGNPIPGLSELGVGDEIN-ETFSMVRLTELPAGMPVAVVVRQLTEHVQGDAEL 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RLKDAGVVPNARVTVE GGV IVIPGHE V LPHEMAHAVKVEKV Sbjct 180 IARLKDAGVVPNARVTVEVKDHGGVMIVIPGHEQVELPHEMAHAVKVEKV 229 >gi|118468273|ref|YP_887081.1| iron-dependent repressor IdeR [Mycobacterium smegmatis str. MC2 155] gi|118169560|gb|ABK70456.1| iron-dependent repressor IdeR [Mycobacterium smegmatis str. MC2 155] Length=230 Score = 394 bits (1013), Expect = 5e-108, Method: Compositional matrix adjust. Identities = 199/230 (87%), Positives = 209/230 (91%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGV PLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWE+VHAEACRWEHVMSE+VERRLV+VL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEDVHAEACRWEHVMSEEVERRLVQVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +NPTTSPFGNPIPGL ELGV P +D +LVRLTELP G PVAVVVRQLTEHVQGD DL Sbjct 121 DNPTTSPFGNPIPGLTELGVTPGVNTEDVSLVRLTELPVGMPVAVVVRQLTEHVQGDTDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RLK+AGVVPNARVTVE GGV IVIPGHE V LPH MAHAVKVEKV Sbjct 181 IGRLKEAGVVPNARVTVEANNNGGVMIVIPGHEQVELPHHMAHAVKVEKV 230 >gi|1171105|gb|AAA86056.1| similar to the Corynebacterium diptheriae diptheria toxin repressor, Swiss-Prot Accession Number P33120 [Mycobacterium smegmatis str. MC2 155] Length=233 Score = 392 bits (1007), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 198/230 (87%), Positives = 207/230 (90%), Gaps = 0/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGV PLRARIAERLDQSGPTVSQTVSRMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA+AVMRKHRLAERLLVDVIGLPWE+VHAEACRWEHVMSE+VERRLV+VL Sbjct 61 HLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEDVHAEACRWEHVMSEEVERRLVQVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSPFGNPIPGL EL V P +D +LVRLTELP G PVAVVVRQLTEHVQGD DL Sbjct 121 ENPTTSPFGNPIPGLTELAVTPGVNTEDVSLVRLTELPVGMPVAVVVRQLTEHVQGDTDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RLK+AGVVPNARVTVE GGV IVIPGHE V LPH MAHAVKVEKV Sbjct 181 IGRLKEAGVVPNARVTVEANNNGGVMIVIPGHEQVELPHHMAHAVKVEKV 230 >gi|169630112|ref|YP_001703761.1| Iron-dependent repressor IdeR [Mycobacterium abscessus ATCC 19977] gi|169242079|emb|CAM63107.1| Iron-dependent repressor IdeR [Mycobacterium abscessus] Length=228 Score = 376 bits (966), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 189/230 (83%), Positives = 210/230 (92%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLNVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGRALA++VMRKHRLAE LLVD+IGLPWE+VHAEACRWEHVMSEDVERRL+ VL Sbjct 61 HLELTDKGRALAVSVMRKHRLAECLLVDIIGLPWEDVHAEACRWEHVMSEDVERRLLTVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSPFGNPIPGL ELGV P ++ A+ VRLTE+P+GS VAVVVR+L EHVQ D DL Sbjct 121 NNPTTSPFGNPIPGLSELGV-PADRSESASAVRLTEIPSGSQVAVVVRRLAEHVQADTDL 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 ++RLKDAGVVPNARVTVE++P GV I+IPGHE+V LPHEMAHAV VEKV Sbjct 180 LSRLKDAGVVPNARVTVESSP-DGVIIIIPGHESVELPHEMAHAVMVEKV 228 >gi|54025749|ref|YP_119991.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] gi|54017257|dbj|BAD58627.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] Length=228 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/230 (75%), Positives = 199/230 (87%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VAGDR Sbjct 1 MKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLLVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGR++A+AVMRKHRLAERLLVD+IGL W+ VHAEACRWEHVMSEDVERRLV+VL Sbjct 61 HLELTEKGRSMAVAVMRKHRLAERLLVDIIGLDWQNVHAEACRWEHVMSEDVERRLVEVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 N+PTTSP+GNPIPGL ELG+ P +D+ LVRL++LP G AVV+R+L EH+Q D ++ Sbjct 121 NHPTTSPYGNPIPGLDELGIAAPP-SDEEQLVRLSDLPQGQGQAVVIRRLAEHIQNDPEV 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I RL++AGVVP+ARVTVE P G V I +PGHE LP EMAHAV+V+ V Sbjct 180 IGRLREAGVVPDARVTVECKP-GAVVITVPGHEGFELPDEMAHAVQVKPV 228 >gi|262202168|ref|YP_003273376.1| iron dependent repressor [Gordonia bronchialis DSM 43247] gi|262085515|gb|ACY21483.1| iron dependent repressor [Gordonia bronchialis DSM 43247] Length=227 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/230 (75%), Positives = 196/230 (86%), Gaps = 3/230 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEG+ PLRARIAERL+QSGPTVSQTV+RMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGR LAIAVMRKHRLAERLLVDVIG+PW+EVH EACRWEHVMSE+VERRL+ VL Sbjct 61 HLELTDKGRGLAIAVMRKHRLAERLLVDVIGMPWDEVHEEACRWEHVMSENVERRLLTVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSP+GNPIPGL LG EP +DA RL++LP G VAV+VR+L+EH Q D +L Sbjct 121 KNPTTSPYGNPIPGLEALGA--EPVTNDAATTRLSDLPQGDKVAVIVRRLSEHAQSDAEL 178 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I L++AGVVPNARVTV P V+I PGHE ++L +EMAH+V VEKV Sbjct 179 IATLREAGVVPNARVTVTCNP-TSVSIDTPGHEGLSLSNEMAHSVFVEKV 227 >gi|312139421|ref|YP_004006757.1| dtxr-like transcriptional regulator [Rhodococcus equi 103S] gi|325672691|ref|ZP_08152387.1| iron-dependent repressor IdeR [Rhodococcus equi ATCC 33707] gi|311888760|emb|CBH48072.1| DtxR-like transcriptional regulator [Rhodococcus equi 103S] gi|325556568|gb|EGD26234.1| iron-dependent repressor IdeR [Rhodococcus equi ATCC 33707] Length=228 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 173/230 (76%), Positives = 199/230 (87%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL+VAGDR Sbjct 1 MKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLQVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGR LA+AVMRKHRLAERLLVD+IGL W++VHAEACRWEHVMSEDVERRLV+VL Sbjct 61 HLELTEKGRNLAVAVMRKHRLAERLLVDIIGLEWDQVHAEACRWEHVMSEDVERRLVEVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSP+GNPIPGL +LG+ P + L+RLT++P G P AVVVR+L EHVQ D +L Sbjct 121 KNPTTSPYGNPIPGLADLGLD-RPVGNAETLIRLTDVPPGKPTAVVVRRLAEHVQSDPEL 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I +L++AGVVP+ARVTVET P G VTI GH+ LP EMAHAV+V++V Sbjct 180 IGQLREAGVVPDARVTVETRP-GSVTITASGHDEFDLPEEMAHAVQVKQV 228 >gi|226306288|ref|YP_002766248.1| iron-dependent regulator IdeR [Rhodococcus erythropolis PR4] gi|229490815|ref|ZP_04384650.1| transcriptional regulatory protein DtxR [Rhodococcus erythropolis SK121] gi|7110452|gb|AAF36925.1|AF221951_1 transcriptional regulatory protein DtxR [Rhodococcus erythropolis] gi|226185405|dbj|BAH33509.1| iron-dependent regulator IdeR [Rhodococcus erythropolis PR4] gi|229322205|gb|EEN87991.1| transcriptional regulatory protein DtxR [Rhodococcus erythropolis SK121] Length=228 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 175/230 (77%), Positives = 199/230 (87%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VAGDR Sbjct 1 MKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLMVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGR LAI+VMRKHRLAERLLVDVIGL WE+VHAEACRWEHVMSE+VERRLV VL Sbjct 61 HLELTDKGRDLAISVMRKHRLAERLLVDVIGLKWEDVHAEACRWEHVMSEEVERRLVVVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSP+GNPIPGL +LG+ P A LVRLT++P G+ AVVVR+L EHVQ D ++ Sbjct 121 NNPTTSPYGNPIPGLDQLGLDG-PVATTETLVRLTDIPHGAQTAVVVRRLAEHVQSDPEV 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I +L+DAGVVP+ARVTVET P G VTI++PGH L EMAHAV+V++V Sbjct 180 IAQLRDAGVVPDARVTVETRP-GSVTIIVPGHSGFDLSEEMAHAVQVKQV 228 >gi|111023768|ref|YP_706740.1| Fe(2+)-dependent transcriptional regulator [Rhodococcus jostii RHA1] gi|110823298|gb|ABG98582.1| Fe(2+)-dependent transcriptional regulator [Rhodococcus jostii RHA1] Length=230 Score = 341 bits (874), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 175/230 (77%), Positives = 197/230 (86%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VAGDR Sbjct 1 MKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLLVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGR LA++VMRKHRLAERLLVDVIGL WEEVHAEACRWEHVMSE+VERRLV+VL Sbjct 61 HLELTEKGRELAVSVMRKHRLAERLLVDVIGLKWEEVHAEACRWEHVMSEEVERRLVEVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSP+GNPIPGL LG+ P L+RLT++P G P AVVVR+L EHVQ D D+ Sbjct 121 NNPTTSPYGNPIPGLALLGLD-RPVDAPETLIRLTDVPPGKPTAVVVRRLAEHVQSDPDV 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I +L++AGVVP+ARVTVET P G VTI +PGH L EMAHAV+V++V Sbjct 180 IGQLREAGVVPDARVTVETKP-GSVTITVPGHSGFDLSEEMAHAVQVKQV 228 >gi|10334814|gb|AAG16749.1|AF277002_1 iron dependent regulatory protein [Rhodococcus equi] Length=230 Score = 340 bits (872), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 172/230 (75%), Positives = 199/230 (87%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 + +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL+VAGDR Sbjct 3 VKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLQVAGDR 62 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGR LA+AVMRKHRLAERLLVD+IGL W++VHAEACRWEHVMSEDVERRLV+VL Sbjct 63 HLELTEKGRNLAVAVMRKHRLAERLLVDIIGLEWDQVHAEACRWEHVMSEDVERRLVEVL 122 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSP+GNPIPGL +LG+ P + L+RLT++P G P AVVVR+L EHVQ D +L Sbjct 123 KNPTTSPYGNPIPGLADLGLD-RPVGNAETLIRLTDVPPGKPTAVVVRRLAEHVQSDPEL 181 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I +L++AGVVP+ARVTVET P G VTI GH+ LP EMAHAV+V++V Sbjct 182 IGQLREAGVVPDARVTVETRP-GSVTITASGHDEFDLPEEMAHAVQVKQV 230 >gi|226366204|ref|YP_002783987.1| iron-dependent regulator IdeR [Rhodococcus opacus B4] gi|226244694|dbj|BAH55042.1| iron-dependent regulator IdeR [Rhodococcus opacus B4] Length=230 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 175/230 (77%), Positives = 197/230 (86%), Gaps = 2/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VAGDR Sbjct 1 MKDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLLVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGR LA++VMRKHRLAERLLVDVIGL WEEVHAEACRWEHVMSE+VERRLV+VL Sbjct 61 HLELTEKGRELAVSVMRKHRLAERLLVDVIGLRWEEVHAEACRWEHVMSEEVERRLVEVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NNPTTSP+GNPIPGL LG+ P L+RLT++P G P AVVVR+L EHVQ D D+ Sbjct 121 NNPTTSPYGNPIPGLALLGLD-RPVDPPETLIRLTDVPPGKPTAVVVRRLAEHVQSDPDV 179 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I +L++AGVVP+ARVTVET P G VTI +PGH L EMAHAV+V++V Sbjct 180 IGQLREAGVVPDARVTVETKP-GSVTITVPGHSGFDLSEEMAHAVQVKQV 228 >gi|296139545|ref|YP_003646788.1| DtxR family iron (metal) dependent repressor [Tsukamurella paurometabola DSM 20162] gi|296027679|gb|ADG78449.1| iron (metal) dependent repressor, DtxR family [Tsukamurella paurometabola DSM 20162] Length=227 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/232 (75%), Positives = 192/232 (83%), Gaps = 7/232 (3%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIY+LEEEGV PLRARIAERLDQSGPTVSQTV RMERDGL+RVAGDR Sbjct 1 MNDLVDTTEMYLRTIYELEEEGVVPLRARIAERLDQSGPTVSQTVQRMERDGLVRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLEL++KGRALAIAVMRKHRLAERLLVDVIGL WE VHAEACRWEHVMSEDVERRL++VL Sbjct 61 HLELSDKGRALAIAVMRKHRLAERLLVDVIGLQWENVHAEACRWEHVMSEDVERRLLEVL 120 Query 121 NNPTTSPFGNPIPGLVELGV--GPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDI 178 NPTTSP+GNPIPGL ELGV G EP RLT+LP G P AVV+++L EHVQ D Sbjct 121 GNPTTSPYGNPIPGLGELGVSIGNEP----TRPARLTDLPQGGPTAVVIKRLAEHVQADN 176 Query 179 DLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 DLI+R ++AGVVP+ARV V T G V I + GHE+ L EMAHAV E V Sbjct 177 DLISRFREAGVVPDARVAV-TVQRGSVVISVAGHEDFELSDEMAHAVFAEAV 227 >gi|343926979|ref|ZP_08766467.1| iron-dependent regulator IdeR [Gordonia alkanivorans NBRC 16433] gi|343763037|dbj|GAA13393.1| iron-dependent regulator IdeR [Gordonia alkanivorans NBRC 16433] Length=231 Score = 327 bits (838), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 164/224 (74%), Positives = 190/224 (85%), Gaps = 3/224 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEG+ PLRARIAERLDQSGPTVSQTV+RMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGIMPLRARIAERLDQSGPTVSQTVARMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE+GR+LA+AVMRKHRLAERLLVDVIG+PW++VH EACRWEHVMSE+VERRL+ VL Sbjct 61 HLELTERGRSLAVAVMRKHRLAERLLVDVIGMPWDQVHEEACRWEHVMSENVERRLLAVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 PTTSP+GNPIPGL LGV E + D R+ +LPAG VAV+VR+L+EH Q D+ L Sbjct 121 EYPTTSPYGNPIPGLDLLGV--EVSSTDDGATRIADLPAGDTVAVIVRRLSEHAQSDVGL 178 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHA 224 I+ L++AGVVPNARVTV T G +TI PGHE + L +MAH+ Sbjct 179 ISHLREAGVVPNARVTV-TNVAGTITINTPGHEGLELSADMAHS 221 >gi|326384466|ref|ZP_08206146.1| iron dependent repressor [Gordonia neofelifaecis NRRL B-59395] gi|326196811|gb|EGD54005.1| iron dependent repressor [Gordonia neofelifaecis NRRL B-59395] Length=226 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/229 (73%), Positives = 190/229 (83%), Gaps = 4/229 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEG+ PLRARIAERL+QSGPTVSQTV+RMERDGLLRVAGDR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGIIPLRARIAERLEQSGPTVSQTVARMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+KGR LA++VMRKHRLAERLLVDVIGLPW+EVH EACRWEHVMSE+VERRLV VL Sbjct 61 HLELTDKGRNLAVSVMRKHRLAERLLVDVIGLPWDEVHDEACRWEHVMSENVERRLVAVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +NPTTSP+GNPIPGL +LGV E A + VRL +LP G VV R ++EH Q D +L Sbjct 121 DNPTTSPYGNPIPGLEQLGV--EFSAREDESVRLVDLPQGDSTVVVAR-MSEHAQADPEL 177 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 I+ L+ AGVVPNARV+V TP V I PGHE +TL E++HA+ V K Sbjct 178 ISELRQAGVVPNARVSVNVTP-RAVIITTPGHEGLTLSSEISHAIFVNK 225 >gi|317506477|ref|ZP_07964278.1| iron dependent repressor protein [Segniliparus rugosus ATCC BAA-974] gi|316255238|gb|EFV14507.1| iron dependent repressor protein [Segniliparus rugosus ATCC BAA-974] Length=229 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 159/230 (70%), Positives = 186/230 (81%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEG+ PLRARIA+RL+QSGPTVSQTVSRMERDGLL V DR Sbjct 1 MNDLVDTTEMYLRTIYDLEEEGIPPLRARIADRLEQSGPTVSQTVSRMERDGLLVVRDDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 LELT+KGR A+AVMRKHRLAERLLVD+IGL WE HAEACRWEHVMS++VERRLV VL Sbjct 61 RLELTDKGRIRAVAVMRKHRLAERLLVDIIGLQWEHAHAEACRWEHVMSDEVERRLVDVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +P +SP+GNPIPGL +LG + D L RL+ELP G P+ VV+R+L EHVQ DIDL Sbjct 121 GHPVSSPYGNPIPGLSDLGESSAGKSPDEGLTRLSELPRGGPIPVVIRRLAEHVQADIDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I + + AG VP+A+VT E V I +PGHE+V LP ++AHAV+VEKV Sbjct 181 IAQFRKAGAVPDAKVTAEVR-SQSVIIGVPGHESVELPSDLAHAVQVEKV 229 >gi|333919421|ref|YP_004493002.1| Fe(2+)-dependent transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333481642|gb|AEF40202.1| Fe(2+)-dependent transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=219 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 159/221 (72%), Positives = 185/221 (84%), Gaps = 2/221 (0%) Query 10 MYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGR 69 MYLRT+Y+LEEEGV PLRARIAERLDQSGPTVSQTV+RMERDGLL VAGDRHLELT KGR Sbjct 1 MYLRTVYELEEEGVVPLRARIAERLDQSGPTVSQTVARMERDGLLSVAGDRHLELTPKGR 60 Query 70 ALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFG 129 LA+AVMRKHRLAERLLVDVIGL WE VHAEACRWEHVMSEDVERRLV VLN+PTTSP+G Sbjct 61 ELAVAVMRKHRLAERLLVDVIGLKWENVHAEACRWEHVMSEDVERRLVSVLNHPTTSPYG 120 Query 130 NPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGV 189 NPIPGL LG+ P + L+RL+++P G+ V V++R+L EHVQ D +LI RL+ AGV Sbjct 121 NPIPGLEMLGLDL-PFEQEPALIRLSDIPQGTSVHVMIRRLAEHVQVDTELIARLRHAGV 179 Query 190 VPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 VPNAR+T + P GG+ I PGHE + + +MAHA++VEKV Sbjct 180 VPNARITAQAYP-GGIRITTPGHEGLDISDDMAHAIQVEKV 219 >gi|296393376|ref|YP_003658260.1| DtxR family iron (metal) dependent repressor [Segniliparus rotundus DSM 44985] gi|296180523|gb|ADG97429.1| iron (metal) dependent repressor, DtxR family [Segniliparus rotundus DSM 44985] Length=232 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 158/230 (69%), Positives = 186/230 (81%), Gaps = 1/230 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+LVDTTEMYLRTIYDLEEEG+ PLRARIA+RL+QSGPTVSQTVSRMERDGLL V DR Sbjct 4 MNDLVDTTEMYLRTIYDLEEEGIPPLRARIADRLEQSGPTVSQTVSRMERDGLLVVRDDR 63 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 LELT+KGR A+AVMRKHRLAERLLVDVIGL WE HAEACRWEHVMS++VERRLV+VL Sbjct 64 RLELTDKGRVRAVAVMRKHRLAERLLVDVIGLKWEHAHAEACRWEHVMSDEVERRLVEVL 123 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 +P +SP+GNPIPGL ELG E L RL+ELP G P+ VV+R+L EHVQ D+DL Sbjct 124 GHPVSSPYGNPIPGLTELGEIIEIDVQGEGLTRLSELPKGGPIPVVIRRLAEHVQADVDL 183 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 I + + AG VP+A+VT E V I +PGHE+V +P ++AHA++VEKV Sbjct 184 IAQFRKAGAVPDAKVTAEVR-SHAVVIGVPGHESVEIPADLAHAIQVEKV 232 >gi|134104578|pdb|2ISZ|A Chain A, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form I gi|134104579|pdb|2ISZ|B Chain B, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form I gi|134104580|pdb|2ISZ|C Chain C, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form I gi|134104581|pdb|2ISZ|D Chain D, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form I gi|134104584|pdb|2IT0|A Chain A, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form Ii gi|134104585|pdb|2IT0|B Chain B, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form Ii gi|134104586|pdb|2IT0|C Chain C, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form Ii gi|134104587|pdb|2IT0|D Chain D, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal Form Ii Length=157 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/143 (99%), Positives = 141/143 (99%), Gaps = 0/143 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPE 143 NNPTTSPFGNPIPGLVELGV E Sbjct 121 NNPTTSPFGNPIPGLVELGVASE 143 >gi|6573375|pdb|1B1B|A Chain A, Iron Dependent Regulator Length=140 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGV 140 NNPTTSPFGNPIPGLVELGV Sbjct 121 NNPTTSPFGNPIPGLVELGV 140 >gi|134104576|pdb|2ISY|A Chain A, Crystal Structure Of The Nickel-Activated Two-Domain Iron- Dependent Regulator (Ider) gi|134104577|pdb|2ISY|B Chain B, Crystal Structure Of The Nickel-Activated Two-Domain Iron- Dependent Regulator (Ider) Length=157 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/143 (98%), Positives = 140/143 (98%), Gaps = 0/143 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR Sbjct 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEA RWEHVMSEDVERRLVKVL Sbjct 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEAXRWEHVMSEDVERRLVKVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPE 143 NNPTTSPFGNPIPGLVELGV E Sbjct 121 NNPTTSPFGNPIPGLVELGVASE 143 >gi|291006941|ref|ZP_06564914.1| DtxR family iron dependent repressor [Saccharopolyspora erythraea NRRL 2338] Length=231 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 150/228 (66%), Positives = 172/228 (76%), Gaps = 1/228 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+L+DTTEMYLRTIYDLEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGLL VA DR Sbjct 1 MNDLIDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLTVAEDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+ GRA AI+VMRKHRLAERLLVDVIGL WE+VH EACRWEHVMSE VER+LVK+L Sbjct 61 HLELTKAGRARAISVMRKHRLAERLLVDVIGLEWEQVHLEACRWEHVMSEAVERKLVKLL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSP+GNPIPGL ELGVG D +L R+ E+ +V ++ EHVQ D DL Sbjct 121 GNPTTSPYGNPIPGLDELGVGDSVEPVDTDLRRVDEVARSGGGRALVCRIAEHVQLDPDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVT-LPHEMAHAVKV 227 ++ LK GVVP + + G I + G E T L +AHAV V Sbjct 181 MSELKKVGVVPGNEIDIVAVAGVNKPIQVQGSEGGTQLQPGIAHAVMV 228 >gi|256375602|ref|YP_003099262.1| iron (metal) dependent repressor, DtxR family [Actinosynnema mirum DSM 43827] gi|255919905|gb|ACU35416.1| iron (metal) dependent repressor, DtxR family [Actinosynnema mirum DSM 43827] Length=230 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/228 (65%), Positives = 173/228 (76%), Gaps = 0/228 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+L+DTTEMYLRTIY+LEEEGV PLRARIAERL QSGPTVSQTV RMERDGL+ VA DR Sbjct 1 MNDLIDTTEMYLRTIYELEEEGVVPLRARIAERLGQSGPTVSQTVGRMERDGLVVVADDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE+GR LA++VMRKHRLAERLLVD+IGL WE VH+EACRWEHVMSE VER+LVK+L Sbjct 61 HLELTEQGRNLAVSVMRKHRLAERLLVDIIGLEWEHVHSEACRWEHVMSEAVERKLVKLL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 NPTTSP+GNPIPGL +LG G +A+L+R+ E+ V V+++ EHVQ D DL Sbjct 121 GNPTTSPYGNPIPGLDKLGDGEPAPPVEADLLRIDEVARRGGGRVEVKRIAEHVQLDPDL 180 Query 181 ITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVE 228 + LK AGV+P + V VE+ V V L +AHAV V+ Sbjct 181 MADLKAAGVMPGSVVKVESLDDSKVVRVGGSGTTAELSQSIAHAVLVQ 228 >gi|302525550|ref|ZP_07277892.1| transcriptional regulatory protein DtxR [Streptomyces sp. AA4] gi|302434445|gb|EFL06261.1| transcriptional regulatory protein DtxR [Streptomyces sp. AA4] Length=240 Score = 274 bits (701), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 143/215 (67%), Positives = 167/215 (78%), Gaps = 2/215 (0%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 +N+L+DTTEMYLRTIY+LEEEGV PLRARIAERL QSGPTVSQTV+RMERDGL+ VA DR Sbjct 10 VNDLIDTTEMYLRTIYELEEEGVVPLRARIAERLQQSGPTVSQTVARMERDGLVVVADDR 69 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HL+LT+ G LA+AVMRKHRLAERLLVDVIGL WE VH EACRWEHVMSE VER+LVK+L Sbjct 70 HLQLTDHGHDLAVAVMRKHRLAERLLVDVIGLEWEHVHNEACRWEHVMSEAVERKLVKLL 129 Query 121 NNPTTSPFGNPIPGLVELGVG-PEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDID 179 ++PTTSP+GNPIPGL +LG G P P A+D LVRL E V +R++ EHVQ D Sbjct 130 DHPTTSPYGNPIPGLDKLGDGDPAPRAEDG-LVRLDEFARTGGGEVEIRRIAEHVQLDES 188 Query 180 LITRLKDAGVVPNARVTVETTPGGGVTIVIPGHEN 214 L+T L+ G+VP VTV GG T+ + G E Sbjct 189 LLTELRTVGIVPGGLVTVGKASGGSATVEVKGTET 223 >gi|300784323|ref|YP_003764614.1| Mn-dependent transcriptional regulator [Amycolatopsis mediterranei U32] gi|299793837|gb|ADJ44212.1| Mn-dependent transcriptional regulator [Amycolatopsis mediterranei U32] gi|340525743|gb|AEK40948.1| Mn-dependent transcriptional regulator [Amycolatopsis mediterranei S699] Length=238 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 148/226 (66%), Positives = 171/226 (76%), Gaps = 3/226 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 +N+L+DTTEMYLRTIY+LEEEGV PLRARIAERL QSGPTVSQTV+RMERDGL+ VA DR Sbjct 10 VNDLIDTTEMYLRTIYELEEEGVVPLRARIAERLQQSGPTVSQTVARMERDGLVVVADDR 69 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HL+LT+ GR LAIAVMRKHRLAERLLVDVIGL WE VH EACRWEHVMSE VER+LVK+L Sbjct 70 HLQLTDHGRELAIAVMRKHRLAERLLVDVIGLEWEHVHNEACRWEHVMSEAVERKLVKLL 129 Query 121 NNPTTSPFGNPIPGLVELGVG-PEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDID 179 ++PTTSP+GNPIPGL +LG G P P A +A+LVRL E V +R++ EHVQ D Sbjct 130 DHPTTSPYGNPIPGLDKLGDGDPAPPA-EADLVRLDEFARTGGGRVEIRRIAEHVQLDES 188 Query 180 LITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAV 225 L+T LK G+VP VTV GG + V G + HAV Sbjct 189 LMTELKSVGIVPGGTVTVGKATGGTIE-VTGGDTTAQVASSALHAV 233 >gi|257056727|ref|YP_003134559.1| Mn-dependent transcriptional regulator [Saccharomonospora viridis DSM 43017] gi|256586599|gb|ACU97732.1| Mn-dependent transcriptional regulator [Saccharomonospora viridis DSM 43017] Length=231 Score = 271 bits (692), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 146/227 (65%), Positives = 172/227 (76%), Gaps = 3/227 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+L+DTTEMYLRTI++LEEEGV PLRARIAERL QSGPTVSQTV+RMERDGL+ VA DR Sbjct 1 MNDLIDTTEMYLRTIFELEEEGVVPLRARIAERLQQSGPTVSQTVARMERDGLVVVADDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HL+LTE GR LA+AVMRKHRLAERLLVDVIGL WE+VH EACRWEHVMSE VER+LV +L Sbjct 61 HLKLTEHGRELAVAVMRKHRLAERLLVDVIGLEWEQVHNEACRWEHVMSEAVERKLVTLL 120 Query 121 NNPTTSPFGNPIPGLVELGVG-PEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDID 179 NPTTSP+GNPIPGL +L G P P A +A+LVRL E+ V +R++ EHVQ D + Sbjct 121 GNPTTSPYGNPIPGLDKLEAGKPAPPA-EADLVRLDEVAKSGGGQVEIRRIAEHVQLDEE 179 Query 180 LITRLKDAGVVPNARVTVETTPGGGVTI-VIPGHENVTLPHEMAHAV 225 L+ +L+ GVVP V V G T+ V G + +P HAV Sbjct 180 LMGKLRSVGVVPGGTVKVGKIANGDPTVEVSNGTTSAHIPASALHAV 226 >gi|325001196|ref|ZP_08122308.1| Mn-dependent transcriptional regulator [Pseudonocardia sp. P1] Length=240 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 148/237 (63%), Positives = 173/237 (73%), Gaps = 10/237 (4%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MN+L+DTTEMYLRTIY+LEEEGV PLRARIAERL QSGPTVSQTV+RMERDGL+ VAGDR Sbjct 1 MNDLIDTTEMYLRTIYELEEEGVVPLRARIAERLGQSGPTVSQTVARMERDGLVVVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT++GR A++VMRKHRLAERLL+DVIGL WE VHAEACRWEHVMSEDVER+LV++L Sbjct 61 HLELTDEGRGRAVSVMRKHRLAERLLIDVIGLEWELVHAEACRWEHVMSEDVERKLVRLL 120 Query 121 NNPTTSPFGNPIPGLVEL---GVGPEPGAD-----DANLVRLTELPAGSPVAVVVRQLTE 172 + PT SP+GNPIPGL EL GP + + L RL EL V VR++ E Sbjct 121 DKPTVSPYGNPIPGLDELEREDHGPSAASSVPPTLEVGLQRLDELARRGGGRVEVRRIAE 180 Query 173 HVQGDIDLITRLKDAGVVPNARVTVETTP--GGGVTIVIPGHENVTLPHEMAHAVKV 227 HVQ D DL+ LK AG+VP V V + P G V + E T+ +AHAV V Sbjct 181 HVQNDADLMAELKLAGIVPGNSVEVGSIPRFGDPVPVTSADDEKATVAPLVAHAVLV 237 >gi|337766396|emb|CCB75107.1| Iron-dependent repressor ideR [Streptomyces cattleya NRRL 8057] Length=230 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/227 (65%), Positives = 171/227 (76%), Gaps = 3/227 (1%) Query 4 LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLE 63 L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL++VAGDRHLE Sbjct 5 LIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVQVAGDRHLE 64 Query 64 LTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNP 123 LTE+GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L +P Sbjct 65 LTEEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELLRHP 124 Query 124 TTSPFGNPIPGLVELGVGPEPGADDANLVRLTEL-PAGSPVAVVVRQLTEHVQGDIDLIT 182 T SP+GNPIPGL ELG G D V LTEL PA VVVR++ E +Q D L+ Sbjct 125 TESPYGNPIPGLEELGEQQGGGFQDEGTVSLTELSPADEAKTVVVRRIGEPIQTDAQLMY 184 Query 183 RLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 L+ AGV P + V+V +PGG +V G E L ++A V V K Sbjct 185 TLRRAGVQPGSVVSVTGSPGG--VLVGSGGEAAELSLDVAGHVFVAK 229 >gi|239989835|ref|ZP_04710499.1| putative iron dependent regulatory protein [Streptomyces roseosporus NRRL 11379] gi|291446850|ref|ZP_06586240.1| iron repressor [Streptomyces roseosporus NRRL 15998] gi|291349797|gb|EFE76701.1| iron repressor [Streptomyces roseosporus NRRL 15998] Length=230 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 146/231 (64%), Positives = 174/231 (76%), Gaps = 4/231 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M+ L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL++VAGDR Sbjct 1 MSGLIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVQVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE+GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L Sbjct 61 HLELTEEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGAD-DANLVRLTEL-PAGSPVAVVVRQLTEHVQGDI 178 +PT SP+GNPIPGL ELG E + DA++V L EL P VVVR++ E +Q D Sbjct 121 RHPTESPYGNPIPGLEELGEKAEAESFLDASMVSLAELDPGAEGKTVVVRRIGEPIQTDA 180 Query 179 DLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 L+ L+ AGV P + V+V +PGG +V E L E+A V V K Sbjct 181 QLMYTLRRAGVQPGSVVSVTESPGG--VLVGSSGEAAELDTEVASHVFVAK 229 >gi|319948425|ref|ZP_08022563.1| putative transcriptional regulator [Dietzia cinnamea P4] gi|319437907|gb|EFV92889.1| putative transcriptional regulator [Dietzia cinnamea P4] Length=229 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 145/235 (62%), Positives = 173/235 (74%), Gaps = 16/235 (6%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIY+LEEEGV PLRARIAERL+QSGPTVSQTV+RMERDGL+ VA DR Sbjct 1 MKDLVDTTEMYLRTIYELEEEGVIPLRARIAERLEQSGPTVSQTVARMERDGLVLVAPDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HL+LT GR LA+ VMRKHRLAERLLVDVIGL E+VHAEACRWEHVMS+DVERRL++VL Sbjct 61 HLQLTATGRELAVDVMRKHRLAERLLVDVIGLELEKVHAEACRWEHVMSDDVERRLIEVL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDL 180 ++P TSP+GNPIPGL +G E D + VRL+ LP +P V +R + E+VQ D DL Sbjct 121 DDPRTSPYGNPIPGLDRIGYA-ESTLDHGDHVRLSALPTDTPHTVRIRAIGENVQIDTDL 179 Query 181 ITRLKDAGVVPNARVT-------VETTPGGGVTIVIPGHENVTLPHEMAHAVKVE 228 I+ + AGV P VT VE G G T+ + G + AHA++VE Sbjct 180 ISEFRAAGVEPLKTVTATRRGHLVELDSGDGRTVELDG--------DHAHAIQVE 226 >gi|331697763|ref|YP_004334002.1| iron (metal) dependent repressor, DtxR family [Pseudonocardia dioxanivorans CB1190] gi|326952452|gb|AEA26149.1| iron (metal) dependent repressor, DtxR family [Pseudonocardia dioxanivorans CB1190] Length=240 Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/238 (64%), Positives = 170/238 (72%), Gaps = 12/238 (5%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 MNEL+DTTEMYLRTIY+LEEEGV PLRARIAERL QSGPTVSQTV+RMERDGL+ VAGDR Sbjct 1 MNELIDTTEMYLRTIYELEEEGVVPLRARIAERLGQSGPTVSQTVARMERDGLVVVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE GRA AIAVMRKHRLAERLL DVIGL WE VHAEACRWEHVMS+ VER+LV +L Sbjct 61 HLELTEDGRARAIAVMRKHRLAERLLTDVIGLEWELVHAEACRWEHVMSDAVERKLVALL 120 Query 121 NNPTTSPFGNPIPGLVELG-----VGPEPGAD----DANLVRLTELPAGSPVAVVVRQLT 171 +NPT SP+GNPIPGL EL GP A + L RL E V VR++ Sbjct 121 DNPTISPYGNPIPGLGELSDPPDLTGPSNAAAPPPLEVGLQRLDEFARRGGGKVEVRRIA 180 Query 172 EHVQGDIDLITRLKDAGVVPNARVTVETTP--GGGVTIVIPGHENVTLPHEMAHAVKV 227 EHVQ D DL+ LK +G+VP V V + G V +V E+ P +AHAV V Sbjct 181 EHVQVDADLMGELKLSGIVPGREVEVRSISRFGDAVPVVADDDESAVAPL-IAHAVLV 237 >gi|182436865|ref|YP_001824584.1| putative iron dependent regulatory protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777460|ref|ZP_08236725.1| iron (metal) dependent repressor, DtxR family [Streptomyces cf. griseus XylebKG-1] gi|178465381|dbj|BAG19901.1| putative iron dependent regulatory protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657793|gb|EGE42639.1| iron (metal) dependent repressor, DtxR family [Streptomyces griseus XylebKG-1] Length=230 Score = 264 bits (674), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 147/233 (64%), Positives = 175/233 (76%), Gaps = 8/233 (3%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M+ L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL++VAGDR Sbjct 1 MSGLIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVQVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE+GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L Sbjct 61 HLELTEEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGAD---DANLVRLTEL-PAGSPVAVVVRQLTEHVQG 176 +PT SP+GNPIPGL ELG E AD DA++V L +L P VVVR++ E +Q Sbjct 121 RHPTESPYGNPIPGLEELGEKAE--ADPFLDASMVSLADLDPGAEGKTVVVRRIGEPIQT 178 Query 177 DIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 D L+ L+ AGV P + V+V +PGG +V E L E+A V V K Sbjct 179 DAQLMYTLRRAGVQPGSVVSVTESPGG--VLVGSSGEAAELDSEVASHVFVAK 229 >gi|297158272|gb|ADI07984.1| putative iron dependent regulatory protein [Streptomyces bingchenggensis BCW-1] Length=230 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/232 (64%), Positives = 174/232 (75%), Gaps = 6/232 (2%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M+ L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL+RVAGDR Sbjct 1 MSGLIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVRVAGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLE TE+GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L Sbjct 61 HLEFTEEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPE--PGADDANLVRLTELPAGSP-VAVVVRQLTEHVQGD 177 +PT SP+GNPIPGL ELG E P DD ++V L EL GS VVVR++ E +Q D Sbjct 121 RHPTESPYGNPIPGLEELGEKAEVDPFLDD-SMVSLRELEPGSEGKTVVVRRIGEPIQMD 179 Query 178 IDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 L+ L+ AGV P + V+V +PGG +V E L ++A V V K Sbjct 180 AQLMYTLRRAGVQPGSVVSVTESPGG--VLVGSSGEAAELDADIASHVFVAK 229 >gi|29830398|ref|NP_825032.1| iron dependent regulatory protein [Streptomyces avermitilis MA-4680] gi|29607509|dbj|BAC71567.1| putative iron dependent regulatory protein [Streptomyces avermitilis MA-4680] Length=230 Score = 261 bits (667), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 146/233 (63%), Positives = 173/233 (75%), Gaps = 8/233 (3%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M+ L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL+ VA DR Sbjct 1 MSGLIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVAVASDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELTE+GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L Sbjct 61 HLELTEEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGAD---DANLVRLTEL-PAGSPVAVVVRQLTEHVQG 176 +PT SP+GNPIPGL EL G + GAD D +V L EL P VVVR++ E +Q Sbjct 121 RHPTESPYGNPIPGLEEL--GEKDGADPFLDEGMVSLAELDPGADGKTVVVRRIGEPIQT 178 Query 177 DIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 D L+ L+ AGV P + V+V +PGG +V G E L ++A V V K Sbjct 179 DAQLMYTLRRAGVQPGSVVSVTESPGG--VLVGSGGEAAELEADVASHVFVAK 229 >gi|256833203|ref|YP_003161930.1| iron (metal) dependent repressor, DtxR family [Jonesia denitrificans DSM 20603] gi|256686734|gb|ACV09627.1| iron (metal) dependent repressor, DtxR family [Jonesia denitrificans DSM 20603] Length=234 Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 139/211 (66%), Positives = 161/211 (77%), Gaps = 5/211 (2%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M++L+DTTEMYLRTIY+L EEG+ PLRARIAERL SGPTVSQTV+RMERDGLL V+GDR Sbjct 1 MSDLIDTTEMYLRTIYELAEEGIVPLRARIAERLGHSGPTVSQTVARMERDGLLYVSGDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT+ G+A A VMRKHRLAERLL DVIGL WE VH EACRWEHVMSE VE RLV++L Sbjct 61 HLELTDLGQAKATRVMRKHRLAERLLTDVIGLEWEFVHDEACRWEHVMSERVEERLVQLL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTEL----PAGSPVAVVVRQLTEHVQG 176 N+P SP+GNPIPGL E+GVG EP A +V LT+ PA V +VR L E VQ Sbjct 121 NSPRYSPYGNPIPGLAEIGVGDEPEAFLDGVVSLTDRVMREPAAGQVVTIVR-LGEPVQT 179 Query 177 DIDLITRLKDAGVVPNARVTVETTPGGGVTI 207 D DL+ RL DAGV P A+VT+ + G V + Sbjct 180 DSDLLGRLHDAGVTPGAQVTLTASDYGVVAV 210 >gi|328884256|emb|CCA57495.1| Iron-dependent repressor IdeR or DtxR [Streptomyces venezuelae ATCC 10712] Length=229 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 143/230 (63%), Positives = 170/230 (74%), Gaps = 3/230 (1%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M+ L+DTTEMYLRTI +LEEEGV P+RARIAERLDQSGPTVSQTV+RMERDGL+ VA DR Sbjct 1 MSGLIDTTEMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVAVASDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 HLELT++GR LA VMRKHRLAE LLVDVIGL WE+VHAEACRWEHVMSE VERR++++L Sbjct 61 HLELTDEGRRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELL 120 Query 121 NNPTTSPFGNPIPGLVELGVGPEPGAD-DANLVRLTELPAGSPVAVVVRQLTEHVQGDID 179 +PT SP+GNPIPGL ELG E A D ++V L EL A VVVR++ E +Q D Sbjct 121 RHPTESPYGNPIPGLEELGEKAEAEAFLDDSMVSLAELDASEGKTVVVRRIGEPIQTDAQ 180 Query 180 LITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEK 229 L+ L+ AGV P + V+V + GG +V E L E+A V V K Sbjct 181 LMYTLRRAGVQPGSVVSVTESAGG--ILVGSSGEAAELDAEVASHVFVAK 228 >gi|172040573|ref|YP_001800287.1| iron-dependent repressor DtxR [Corynebacterium urealyticum DSM 7109] gi|171851877|emb|CAQ04853.1| iron-dependent repressor DtxR [Corynebacterium urealyticum DSM 7109] Length=239 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 142/238 (60%), Positives = 168/238 (71%), Gaps = 10/238 (4%) Query 1 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDR 60 M +LVDTTEMYLRTIY+LEEEG+ PLRARIAERL+QSGPTVSQTV+RMERDGLL V DR Sbjct 1 MRDLVDTTEMYLRTIYELEEEGIPPLRARIAERLEQSGPTVSQTVARMERDGLLSVEKDR 60 Query 61 HLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVL 120 L+L+ +GRALA AVMRKHRLAERLL DVIGLPW++VH EACRWEHVMS++VE+RLV+VL Sbjct 61 SLKLSAEGRALATAVMRKHRLAERLLTDVIGLPWDKVHDEACRWEHVMSDEVEQRLVEVL 120 Query 121 NNPTTSPFGNPIPGLVEL--------GVGPEPGADDANLVRLTELPAGSPVAVVVRQLTE 172 + TSPFGNPIPGL L A+D N VR +L AG VV E Sbjct 121 DEHDTSPFGNPIPGLNFLTEQAADSTDFSQTAVAEDPNSVRAADLAAGEEHEAVVASFNE 180 Query 173 HVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV 230 VQ + L+ RL+ AG++P VTV P I+ G V +P E+AHAV+V V Sbjct 181 IVQVEGSLMKRLRKAGILPG--VTVTVIPAEDHLILRIGSAEVAIPSELAHAVRVRSV 236 Lambda K H 0.316 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 300567788510 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40