BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2716
Length=228
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609853|ref|NP_217232.1| hypothetical protein Rv2716 [Mycoba... 460 9e-128
gi|253798202|ref|YP_003031203.1| hypothetical protein TBMG_01258... 458 3e-127
gi|306780898|ref|ZP_07419235.1| hypothetical protein TMBG_02853 ... 456 1e-126
gi|581380|emb|CAA41963.1| thymidylate synthase [Mycobacterium tu... 456 1e-126
gi|183982010|ref|YP_001850301.1| hypothetical protein MMAR_1996 ... 369 2e-100
gi|118618680|ref|YP_907012.1| hypothetical protein MUL_3359 [Myc... 365 3e-99
gi|296171815|ref|ZP_06852929.1| PhzF family phenazine biosynthes... 358 3e-97
gi|336458921|gb|EGO37877.1| putative epimerase, PhzC/PhzF [Mycob... 358 3e-97
gi|254776050|ref|ZP_05217566.1| thymidylate synthase [Mycobacter... 352 2e-95
gi|254821021|ref|ZP_05226022.1| thymidylate synthase [Mycobacter... 351 5e-95
gi|240169682|ref|ZP_04748341.1| hypothetical protein MkanA1_1024... 347 6e-94
gi|108799138|ref|YP_639335.1| phenazine biosynthesis PhzC/PhzF p... 341 4e-92
gi|118472830|ref|YP_887077.1| thymidylate synthase [Mycobacteriu... 329 2e-88
gi|118464306|ref|YP_882787.1| thymidylate synthase [Mycobacteriu... 322 2e-86
gi|315444865|ref|YP_004077744.1| phenazine biosynthesis protein ... 315 4e-84
gi|145224534|ref|YP_001135212.1| PhzF family phenazine biosynthe... 314 8e-84
gi|339299191|gb|AEJ51301.1| thymidylate synthase [Mycobacterium ... 301 7e-80
gi|120403434|ref|YP_953263.1| PhzF family phenazine biosynthesis... 297 7e-79
gi|169630118|ref|YP_001703767.1| hypothetical protein MAB_3035 [... 295 4e-78
gi|342858415|ref|ZP_08715070.1| thymidylate synthase [Mycobacter... 287 1e-75
gi|229490901|ref|ZP_04384736.1| phenazine biosynthesis protein P... 261 8e-68
gi|226306272|ref|YP_002766232.1| hypothetical protein RER_27850 ... 259 2e-67
gi|111023757|ref|YP_706729.1| phenazine biosynthesis protein [Rh... 251 5e-65
gi|226366193|ref|YP_002783976.1| hypothetical protein ROP_67840 ... 249 2e-64
gi|284029688|ref|YP_003379619.1| phenazine biosynthesis protein ... 187 7e-46
gi|54025761|ref|YP_120003.1| hypothetical protein nfa37910 [Noca... 184 7e-45
gi|148271922|ref|YP_001221483.1| hypothetical protein CMM_0743 [... 177 8e-43
gi|170782571|ref|YP_001710904.1| hypothetical protein CMS_2228 [... 166 2e-39
gi|29832472|ref|NP_827106.1| hypothetical protein SAV_5929 [Stre... 162 5e-38
gi|302550973|ref|ZP_07303315.1| phenazine biosynthesis PhzC/PhzF... 160 9e-38
gi|291440011|ref|ZP_06579401.1| phenazine biosynthesis PhzC/PhzF... 157 9e-37
gi|294812329|ref|ZP_06770972.1| Phenazine biosynthesis PhzC/PhzF... 155 5e-36
gi|239987251|ref|ZP_04707915.1| hypothetical protein SrosN1_0809... 154 7e-36
gi|291444211|ref|ZP_06583601.1| phenazine biosynthesis PhzC/PhzF... 154 7e-36
gi|21220737|ref|NP_626516.1| hypothetical protein SCO2268 [Strep... 152 3e-35
gi|289772004|ref|ZP_06531382.1| phenazine biosynthesis PhzC/PhzF... 152 3e-35
gi|290960984|ref|YP_003492166.1| hypothetical protein SCAB_66271... 152 3e-35
gi|108804873|ref|YP_644810.1| phenazine biosynthesis PhzC/PhzF p... 150 1e-34
gi|333027545|ref|ZP_08455609.1| putative phenazine biosynthesis ... 147 1e-33
gi|302518681|ref|ZP_07271023.1| phenazine biosynthesis PhzC/PhzF... 147 1e-33
gi|297199242|ref|ZP_06916639.1| phenazine biosynthesis PhzC/PhzF... 146 2e-33
gi|318062710|ref|ZP_07981431.1| hypothetical protein SSA3_32564 ... 144 7e-33
gi|318080648|ref|ZP_07987980.1| hypothetical protein SSA3_29146 ... 144 1e-32
gi|295839293|ref|ZP_06826226.1| PhzF family phenazine biosynthes... 142 3e-32
gi|302560967|ref|ZP_07313309.1| PhzF family phenazine biosynthes... 142 4e-32
gi|320011116|gb|ADW05966.1| Phenazine biosynthesis PhzC/PhzF pro... 140 1e-31
gi|182439035|ref|YP_001826754.1| hypothetical protein SGR_5242 [... 138 5e-31
gi|297194713|ref|ZP_06912111.1| phenazine biosynthesis PhzC/PhzF... 138 7e-31
gi|337769527|emb|CCB78240.1| conserved protein of unknown functi... 137 1e-30
gi|329934896|ref|ZP_08284937.1| phenazine biosynthesis protein [... 137 1e-30
>gi|15609853|ref|NP_217232.1| hypothetical protein Rv2716 [Mycobacterium tuberculosis H37Rv]
gi|15842254|ref|NP_337291.1| PhzF family phenazine biosynthesis protein [Mycobacterium tuberculosis
CDC1551]
gi|31793888|ref|NP_856381.1| hypothetical protein Mb2735 [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=228
Score = 460 bits (1183), Expect = 9e-128, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA
Sbjct 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA
Sbjct 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA
Sbjct 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD
Sbjct 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
>gi|253798202|ref|YP_003031203.1| hypothetical protein TBMG_01258 [Mycobacterium tuberculosis KZN
1435]
gi|254551772|ref|ZP_05142219.1| hypothetical protein Mtube_15157 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289553499|ref|ZP_06442709.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
9 more sequence titles
Length=228
Score = 458 bits (1179), Expect = 3e-127, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA
Sbjct 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA
Sbjct 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDLDSLDALAAADPADFPDDI HYLWTWTDRSAGSLRARMFAANLGVTEDEATGA
Sbjct 121 PEFAIHDLDSLDALAAADPADFPDDITHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD
Sbjct 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
>gi|306780898|ref|ZP_07419235.1| hypothetical protein TMBG_02853 [Mycobacterium tuberculosis SUMu002]
gi|306785523|ref|ZP_07423845.1| hypothetical protein TMCG_01964 [Mycobacterium tuberculosis SUMu003]
gi|306790119|ref|ZP_07428441.1| hypothetical protein TMDG_00430 [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=228
Score = 456 bits (1174), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA
Sbjct 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATIHTPRTEIPFAGHPTVGASW LRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA
Sbjct 61 HATIHTPRTEIPFAGHPTVGASWSLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA
Sbjct 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD
Sbjct 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
>gi|581380|emb|CAA41963.1| thymidylate synthase [Mycobacterium tuberculosis]
Length=450
Score = 456 bits (1173), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 3 IEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
IEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA
Sbjct 225 IEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 284
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE
Sbjct 285 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 344
Query 123 FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAA 182
FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAA
Sbjct 345 FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAA 404
Query 183 IRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
IRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD
Sbjct 405 IRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 450
>gi|183982010|ref|YP_001850301.1| hypothetical protein MMAR_1996 [Mycobacterium marinum M]
gi|183175336|gb|ACC40446.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=228
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 179/228 (79%), Positives = 204/228 (90%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTD GNFGNPLGV++ASKVE RDRQ LA++ YSET+FVDLP+ GS TA
Sbjct 1 MGIDVTVLRVFTDPTGNFGNPLGVVDASKVEPRDRQHLASRLAYSETVFVDLPATGSHTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRT+I FAGHPTVGASWWLRE+GTP+NTLQVPAG+VQV + DLT ISAR+EWA
Sbjct 61 HATIYTPRTDIAFAGHPTVGASWWLREQGTPVNTLQVPAGLVQVHHDRDLTTISARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDLDS DALAAADP+DF DD AHYLWTWTD +AG LR+RMFA+NLGV EDEATG+
Sbjct 121 PEFAIHDLDSPDALAAADPSDFADDTAHYLWTWTDEAAGELRSRMFASNLGVEEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+R+TDYLSRDLTITQGKGS+I+TTWS EGWV VAGRVVSDGV +D
Sbjct 181 AAMRLTDYLSRDLTITQGKGSIINTTWSAEGWVAVAGRVVSDGVTHVD 228
>gi|118618680|ref|YP_907012.1| hypothetical protein MUL_3359 [Mycobacterium ulcerans Agy99]
gi|118570790|gb|ABL05541.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=228
Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/228 (79%), Positives = 203/228 (90%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTD GNFGNPLGV++ASKVE RDRQ LA++ YSET+FVDLP+ GS TA
Sbjct 1 MGIDVTVLRVFTDPIGNFGNPLGVVDASKVEPRDRQHLASRLAYSETVFVDLPATGSHTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HAT +TPRT+I FAGHPTVGASWWLRE+GTP+NTLQVPAG+VQV + DLT ISAR+EWA
Sbjct 61 HATTYTPRTDIAFAGHPTVGASWWLREQGTPVNTLQVPAGLVQVHHDRDLTTISARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDLDS DALAAADP+DF DD AHYLWTWTD +AG LR+RMFA+NLGV EDEATG+
Sbjct 121 PEFAIHDLDSPDALAAADPSDFADDTAHYLWTWTDDAAGDLRSRMFASNLGVEEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+R+TDYLSRDLTITQGKGS+I+TTWS EGWV VAGRVVSDGV +D
Sbjct 181 AAMRLTDYLSRDLTITQGKGSIINTTWSAEGWVAVAGRVVSDGVTHVD 228
>gi|296171815|ref|ZP_06852929.1| PhzF family phenazine biosynthesis protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295893951|gb|EFG73719.1| PhzF family phenazine biosynthesis protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=228
Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/228 (77%), Positives = 197/228 (87%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTD DGNFGNPLGV++A +VE DRQ+LA + GYSET+FVDLP+PGSTTA
Sbjct 1 MGIDVTVLRVFTDRDGNFGNPLGVVDAGQVEPGDRQRLATRLGYSETVFVDLPAPGSTTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TP +I FAGHPTVGASWWLRE+GTPINTLQV AGIVQV Y D T+ISARSEWA
Sbjct 61 HATIYTPLVQIAFAGHPTVGASWWLREQGTPINTLQVTAGIVQVGYAADSTSISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE A+ + DS D L AADP DFPDD AHYLW WTDR+AGSLRARMFAANLGV EDEATG+
Sbjct 121 PEVALQEFDSADDLLAADPGDFPDDTAHYLWAWTDRNAGSLRARMFAANLGVPEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDL ITQGKGS+I TTW+ EGWV VAGRVV+DGV L+
Sbjct 181 AAMRITDYLSRDLHITQGKGSIIETTWNAEGWVGVAGRVVNDGVTYLN 228
>gi|336458921|gb|EGO37877.1| putative epimerase, PhzC/PhzF [Mycobacterium avium subsp. paratuberculosis
S397]
Length=228
Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 172/228 (76%), Positives = 198/228 (87%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTDSDGNFGNPLGV++A +VE DRQ+LA Q GYSET+FVDLP+PGS+TA
Sbjct 1 MGIDVTVLRVFTDSDGNFGNPLGVVDAGRVEVADRQRLATQLGYSETVFVDLPAPGSSTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRTE+PFAGHPTVGA+WWLRE+G+PINTL VPAGIVQV Y G ISARSEWA
Sbjct 61 HATIYTPRTELPFAGHPTVGAAWWLREQGSPINTLAVPAGIVQVGYDGPRARISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE A+H+ S + L AADP +F DD AHYLW WTDR+AG+LR+RMFAANLGV EDEATG+
Sbjct 121 PELALHEFGSAEELLAADPTEFSDDTAHYLWAWTDRAAGALRSRMFAANLGVPEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDL ITQGKGS+I T+WS EGWV VAGRVV+DGV LD
Sbjct 181 AAMRITDYLSRDLRITQGKGSVIETSWSAEGWVGVAGRVVNDGVRHLD 228
>gi|254776050|ref|ZP_05217566.1| thymidylate synthase [Mycobacterium avium subsp. avium ATCC 25291]
Length=228
Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/228 (75%), Positives = 196/228 (86%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVF DSDGNFGNPLGV++A +VE RQ+LA Q GYSET+FVDLP+PGS+TA
Sbjct 1 MGIDVTVLRVFADSDGNFGNPLGVVDAGRVEVAGRQRLATQLGYSETVFVDLPAPGSSTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRTE+PFAGHPTVGA+WWLRE+G+PINTL VPAGIVQV Y G ISARSEWA
Sbjct 61 HATIYTPRTELPFAGHPTVGAAWWLREQGSPINTLAVPAGIVQVGYDGPRARISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE A+H+ S + + AADP +F DD AHYLW WTDR+AG+LR+RMFAANLGV EDEATG+
Sbjct 121 PELALHEFGSAEEVLAADPTEFSDDTAHYLWAWTDRAAGALRSRMFAANLGVPEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDL ITQGKGS+I T+WS EGWV VAGRVV+DGV LD
Sbjct 181 AAMRITDYLSRDLRITQGKGSVIETSWSAEGWVGVAGRVVNDGVRHLD 228
>gi|254821021|ref|ZP_05226022.1| thymidylate synthase [Mycobacterium intracellulare ATCC 13950]
Length=228
Score = 351 bits (900), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/228 (75%), Positives = 195/228 (86%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTD+DGNFGNPLGV++A++V DRQ++A Q GYSET+FVD P+ GS TA
Sbjct 1 MGIDVTVLRVFTDADGNFGNPLGVVDAAEVGVADRQRVATQLGYSETVFVDRPAAGSATA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRTE+PFAGHPTVGASWWLRE G PINTLQ+PAGIVQV Y T ISAR+EWA
Sbjct 61 HATIYTPRTELPFAGHPTVGASWWLRENGRPINTLQIPAGIVQVGYDEHHTRISARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFA+H+ S D + AADP DFPDD AHYLW WTDR+AG+LR RMFAANLGV EDEATG+
Sbjct 121 PEFALHEFASADDVLAADPTDFPDDTAHYLWAWTDRAAGALRVRMFAANLGVAEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLS++L ITQG GS+I TTWS EGWV VAGRVV+DGV QLD
Sbjct 181 AAMRITDYLSQNLRITQGNGSVIETTWSAEGWVAVAGRVVNDGVRQLD 228
>gi|240169682|ref|ZP_04748341.1| hypothetical protein MkanA1_10242 [Mycobacterium kansasii ATCC
12478]
Length=228
Score = 347 bits (891), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/227 (80%), Positives = 197/227 (87%), Gaps = 0/227 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M IEV+VLRVFTDS+GNFGNPLGV++AS+V+ RDRQ LA Q GYSETIFVDLP+ GS TA
Sbjct 1 MGIEVTVLRVFTDSEGNFGNPLGVVDASRVQPRDRQHLANQLGYSETIFVDLPAAGSHTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATIHTPRT +PFAGHP VG SWWLRERG PI TL VPAG+VQVSY DLTAISAR+EWA
Sbjct 61 HATIHTPRTSLPFAGHPIVGVSWWLRERGMPIKTLHVPAGLVQVSYDNDLTAISARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE AIH LDSLDALAAADP DF DD +HYLWTWTD AG+LRARMFA+NLGV EDEATG+
Sbjct 121 PELAIHHLDSLDALAAADPDDFSDDTSHYLWTWTDEPAGALRARMFASNLGVEEDEATGS 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQL 227
AA+RITDYLSRDLTITQGKGS++ TTWS EGWV VAG V DGV QL
Sbjct 181 AAMRITDYLSRDLTITQGKGSVLKTTWSAEGWVTVAGLVADDGVMQL 227
>gi|108799138|ref|YP_639335.1| phenazine biosynthesis PhzC/PhzF protein [Mycobacterium sp. MCS]
gi|119868253|ref|YP_938205.1| PhzF family phenazine biosynthesis protein [Mycobacterium sp.
KMS]
gi|126434746|ref|YP_001070437.1| PhzF family phenazine biosynthesis protein [Mycobacterium sp.
JLS]
gi|108769557|gb|ABG08279.1| Phenazine biosynthesis PhzC/PhzF protein [Mycobacterium sp. MCS]
gi|119694342|gb|ABL91415.1| phenazine biosynthesis protein PhzF family [Mycobacterium sp.
KMS]
gi|126234546|gb|ABN97946.1| phenazine biosynthesis protein PhzF family [Mycobacterium sp.
JLS]
Length=228
Score = 341 bits (875), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 164/228 (72%), Positives = 191/228 (84%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAI+V VLRVFTD DGN GNPLGV++A+ V+ DRQ++A + GYSETIFVD+P G+TTA
Sbjct 1 MAIDVQVLRVFTDPDGNHGNPLGVVDAAAVDPGDRQRIARELGYSETIFVDIPQAGATTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
H I TP TE+PFAGHPTVGA+WWLRE G P++TLQVPAGIVQV Y GDLT + ARS+WA
Sbjct 61 HIRIFTPATELPFAGHPTVGAAWWLRENGLPVHTLQVPAGIVQVGYEGDLTVVRARSDWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAIHDL S + LAAADP D+ DD HYLWTWTDR AG +RARMFA +LGV EDEATGA
Sbjct 121 PEFAIHDLSSTEVLAAADPGDYSDDAHHYLWTWTDRDAGHIRARMFAPDLGVPEDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDLTI QGKGS+IHT WSP+GWV +AGRVV+D ++D
Sbjct 181 AAVRITDYLSRDLTIVQGKGSVIHTVWSPDGWVSIAGRVVADAGRRVD 228
>gi|118472830|ref|YP_887077.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
gi|118174117|gb|ABK75013.1| thymidylate synthase [Mycobacterium smegmatis str. MC2 155]
Length=229
Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/228 (72%), Positives = 194/228 (86%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAI+V+VLRVFTDSDG FGNPLGV++ S V+ DRQ++A + GYSETIF+DLP P S TA
Sbjct 1 MAIDVTVLRVFTDSDGKFGNPLGVVDNSTVDPADRQRIAKELGYSETIFIDLPGPDSHTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HA I TP +E+PFAGHPTVGA+W+LR+ G PI TLQVPAGIVQV+Y GDL AISARSEWA
Sbjct 61 HARIFTPASELPFAGHPTVGAAWYLRDIGRPIKTLQVPAGIVQVTYDGDLAAISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAI+DL S + L +ADP D+ DD+ HYLWTW+D++ G LR+RMFA NLG+ EDEATGA
Sbjct 121 PEFAIYDLPSAEELMSADPDDYDDDVQHYLWTWSDKNEGVLRSRMFATNLGIREDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDLTI QGKGS+I T WSPEGWV+VAGRVV+DG QL+
Sbjct 181 AAVRITDYLSRDLTIVQGKGSVIRTRWSPEGWVQVAGRVVNDGTRQLE 228
>gi|118464306|ref|YP_882787.1| thymidylate synthase [Mycobacterium avium 104]
gi|118165593|gb|ABK66490.1| thymidylate synthase [Mycobacterium avium 104]
Length=217
Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/228 (70%), Positives = 185/228 (82%), Gaps = 11/228 (4%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVF DSDGNFGNPLGV++A +VE RQ+LA Q GYSET+FVDLP+PGS+TA
Sbjct 1 MGIDVTVLRVFADSDGNFGNPLGVVDAGRVEVAGRQRLATQLGYSETVFVDLPAPGSSTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRTE+PFAGHPTVGA+WWLRE+G+PINTL VPAGIVQV Y G ISARSEWA
Sbjct 61 HATIYTPRTELPFAGHPTVGAAWWLREQGSPINTLAVPAGIVQVGYDGPCARISARSEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE A+H+ S + + AADP +F DD A +LR+RMFAANLGV EDEATG+
Sbjct 121 PELALHEFGSAEEVLAADPTEFSDDTAR-----------ALRSRMFAANLGVPEDEATGS 169
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RITDYLSRDL ITQGKGS+I T+WS EGWV VAGRVV+DGV LD
Sbjct 170 AAMRITDYLSRDLRITQGKGSVIETSWSAEGWVGVAGRVVNDGVRHLD 217
>gi|315444865|ref|YP_004077744.1| phenazine biosynthesis protein PhzF family [Mycobacterium sp.
Spyr1]
gi|315263168|gb|ADT99909.1| phenazine biosynthesis protein PhzF family [Mycobacterium sp.
Spyr1]
Length=228
Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/228 (69%), Positives = 193/228 (85%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAI+V+VLRVFTD DG FGNPLGV++AS V+ DRQ++A + GYSET+F+ LP G+ +A
Sbjct 1 MAIDVTVLRVFTDQDGRFGNPLGVVDASTVDPGDRQRIATELGYSETVFITLPPEGTHSA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HA IHTP E+PFAGHPTVGA+WWLR+RGTPI TLQVPAGIVQ+SY G+L A+SAR+EWA
Sbjct 61 HAHIHTPTLELPFAGHPTVGAAWWLRDRGTPIKTLQVPAGIVQISYPGELAAVSARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
P F+I+D+ +LD LAAADP D+ D+ HYLWTW D++AGS+RARMFA ++G+ EDEATGA
Sbjct 121 PTFSIYDVATLDELAAADPDDYADEAEHYLWTWIDQAAGSIRARMFAPHMGIREDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RIT+YLSRDLTI QGKGS++ TTWS GWV VAGRVV DG Q+D
Sbjct 181 AAVRITEYLSRDLTIVQGKGSVLQTTWSAYGWVEVAGRVVDDGQRQID 228
>gi|145224534|ref|YP_001135212.1| PhzF family phenazine biosynthesis protein [Mycobacterium gilvum
PYR-GCK]
gi|145217020|gb|ABP46424.1| phenazine biosynthesis protein PhzF family [Mycobacterium gilvum
PYR-GCK]
Length=228
Score = 314 bits (804), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 156/228 (69%), Positives = 193/228 (85%), Gaps = 0/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAI+V+VLRVFTD DG FGNPLGV++AS V+ DRQ++A + GYSET+F+ LP G+ +A
Sbjct 1 MAIDVTVLRVFTDQDGRFGNPLGVVDASTVDPGDRQRIATELGYSETVFITLPPEGTHSA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HA IHTP E+PFAGHPTVGA+WWLR+RGTPI TLQVPAGIVQ+SY G+L A+SAR+EWA
Sbjct 61 HAHIHTPTLELPFAGHPTVGAAWWLRDRGTPIKTLQVPAGIVQISYPGELAAVSARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
P F+I+D+ +LD LAAADP D+ D+ HYLWTW D++AG++RARMFA ++G+ EDEATGA
Sbjct 121 PTFSIYDVATLDELAAADPDDYADEAEHYLWTWIDQAAGTIRARMFAPHMGIREDEATGA 180
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AA+RIT+YLSRDLTI QGKGS++ TTWS GWV VAGRVV DG Q+D
Sbjct 181 AAVRITEYLSRDLTIVQGKGSVLQTTWSAYGWVEVAGRVVDDGQRQID 228
>gi|339299191|gb|AEJ51301.1| thymidylate synthase [Mycobacterium tuberculosis CCDC5180]
Length=150
Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/150 (99%), Positives = 150/150 (100%), Gaps = 0/150 (0%)
Query 79 VGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFAIHDLDSLDALAAAD 138
+GASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFAIHDLDSLDALAAAD
Sbjct 1 MGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFAIHDLDSLDALAAAD 60
Query 139 PADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYLSRDLTITQG 198
PADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYLSRDLTITQG
Sbjct 61 PADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYLSRDLTITQG 120
Query 199 KGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
KGSLIHTTWSPEGWVRVAGRVVSDGVAQLD
Sbjct 121 KGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 150
>gi|120403434|ref|YP_953263.1| PhzF family phenazine biosynthesis protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956252|gb|ABM13257.1| phenazine biosynthesis protein PhzF family [Mycobacterium vanbaalenii
PYR-1]
Length=229
Score = 297 bits (761), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/229 (68%), Positives = 194/229 (85%), Gaps = 1/229 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
MAI+V+VLRVFTD DG FGNPLGV++AS V+ DRQ++A + G+SET+F+ LP G+ +A
Sbjct 1 MAIDVTVLRVFTDRDGRFGNPLGVVDASTVQAADRQRIATELGFSETVFITLPREGTHSA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
A IHTP T++PFAGHPTVGASWWL++RG PI TLQVPAGIVQV+Y GDLTA+SAR++WA
Sbjct 61 SAHIHTPTTQLPFAGHPTVGASWWLKDRGLPIKTLQVPAGIVQVTYTGDLTAVSARADWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIA-HYLWTWTDRSAGSLRARMFAANLGVTEDEATG 179
P+F+I+ + SLD LAAADP D+ DD A HYLWTW D +A ++R+RMFA +LG+ EDEATG
Sbjct 121 PDFSINHVASLDDLAAADPDDYADDEAEHYLWTWLDEAADTIRSRMFAPHLGIREDEATG 180
Query 180 AAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
AAA+RIT++LSRDLTI QG+GS+I T WSPEGWV++AGRVV DG Q+D
Sbjct 181 AAAVRITEHLSRDLTIVQGQGSVIETKWSPEGWVQIAGRVVDDGQRQID 229
>gi|169630118|ref|YP_001703767.1| hypothetical protein MAB_3035 [Mycobacterium abscessus ATCC 19977]
gi|169242085|emb|CAM63113.1| Conserved hypothetical protein (phenazine biosynthesis?) [Mycobacterium
abscessus]
Length=227
Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/228 (63%), Positives = 177/228 (78%), Gaps = 1/228 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M+++V+V+RVFTD GNFGNPLG++N + V DRQQ+AA+ G+SET+FVDLP+ GS TA
Sbjct 1 MSVDVAVVRVFTDETGNFGNPLGIVNGADVGAADRQQVAARLGFSETVFVDLPAEGSNTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
H I TP E+PFAGHPTVG +WWLRERGTP+NTLQVPAG++QVSY D T I ARS+WA
Sbjct 61 HLRIFTPAAELPFAGHPTVGLAWWLRERGTPVNTLQVPAGVLQVSYD-DRTWIRARSDWA 119
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PE H+ DS + AADPAD+PD++ H +W W +R A +R+R+FA++LGV EDEATG+
Sbjct 120 PETDFHESDSPADVEAADPADYPDELLHCIWAWQNRDANLVRSRVFASDLGVDEDEATGS 179
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQLD 228
A R+TD LSRDL I QGKGS I T WSPEGWV + GRVV+D LD
Sbjct 180 VAARLTDLLSRDLIINQGKGSQIFTQWSPEGWVTIGGRVVADQPLTLD 227
>gi|342858415|ref|ZP_08715070.1| thymidylate synthase [Mycobacterium colombiense CECT 3035]
gi|342134119|gb|EGT87299.1| thymidylate synthase [Mycobacterium colombiense CECT 3035]
Length=221
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/181 (76%), Positives = 158/181 (88%), Gaps = 0/181 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I+V+VLRVFTDSDGNFGNPLGV++A +VE RQ+LA Q GYSET+FVDLP+PGS TA
Sbjct 1 MGIDVTVLRVFTDSDGNFGNPLGVVDAGQVEATARQRLATQLGYSETVFVDLPAPGSPTA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
HATI+TPRTE+PFAGHPTVGA+WWLRE G+PINTLQVPAGIVQV Y G I+AR++WA
Sbjct 61 HATIYTPRTELPFAGHPTVGATWWLREHGSPINTLQVPAGIVQVGYDGHRARINARADWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFA+H+ S D + AADPAD+PDD AHYLW WTDR+AGSLR+RMFAANLGV EDEATG+
Sbjct 121 PEFALHEFGSADEVLAADPADYPDDAAHYLWAWTDRAAGSLRSRMFAANLGVVEDEATGS 180
Query 181 A 181
A
Sbjct 181 A 181
>gi|229490901|ref|ZP_04384736.1| phenazine biosynthesis protein PhzF family protein [Rhodococcus
erythropolis SK121]
gi|229322291|gb|EEN88077.1| phenazine biosynthesis protein PhzF family protein [Rhodococcus
erythropolis SK121]
Length=226
Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/222 (57%), Positives = 166/222 (75%), Gaps = 1/222 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M IEVSV+RVFTD +G GNPLG+++AS V DRQ +A + YSETIF+D+P G++ A
Sbjct 1 MGIEVSVVRVFTDENGKHGNPLGIVDASTVAESDRQAVAKELDYSETIFIDVPDDGASRA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
I TP E+PFAGHPTVGA+WWL E+G ++ L VPAG V V G LT + AR+EWA
Sbjct 61 RVQIFTPAAELPFAGHPTVGATWWLGEQGRRVSALDVPAGSVDVRQSGALTWVRARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAI+ +D++D + ADP+D+ D + YLW W D+ ++RARMFA +G+ EDEATG+
Sbjct 121 PEFAIYPMDTVDDVIDADPSDYEADHS-YLWAWQDKLEAAIRARMFAPVMGIAEDEATGS 179
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSD 222
AA+RITD L + L ITQG+GS++HTT+SPEGW+ V GRVV++
Sbjct 180 AALRITDRLRKSLLITQGRGSVLHTTFSPEGWLEVGGRVVAE 221
>gi|226306272|ref|YP_002766232.1| hypothetical protein RER_27850 [Rhodococcus erythropolis PR4]
gi|226185389|dbj|BAH33493.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=226
Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/222 (57%), Positives = 165/222 (75%), Gaps = 1/222 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M IEVSV+RVFTD +G GNPLG+++AS V DRQ +A + YSETIF+D+P G++ A
Sbjct 1 MGIEVSVVRVFTDENGKHGNPLGIVDASTVAESDRQAVAKELDYSETIFIDVPDDGASRA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
I TP E+PFAGHPTVGA+WWL E+G ++ L VPAG V V G LT + AR+EWA
Sbjct 61 RVQIFTPAAELPFAGHPTVGATWWLGEQGRRVSALDVPAGSVDVRQSGALTWVRARAEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEFAI+ +D++D + ADP+D+ D + YLW W D+ ++RARMFA +G+ EDEATG+
Sbjct 121 PEFAIYPMDTVDDVIDADPSDYEADHS-YLWAWQDKLEAAIRARMFAPVMGIAEDEATGS 179
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSD 222
AA+RITD L + L ITQG GS++HTT+SPEGW+ V GRVV++
Sbjct 180 AALRITDRLRKSLLITQGCGSVLHTTFSPEGWLEVGGRVVAE 221
>gi|111023757|ref|YP_706729.1| phenazine biosynthesis protein [Rhodococcus jostii RHA1]
gi|110823287|gb|ABG98571.1| probable phenazine biosynthesis protein [Rhodococcus jostii RHA1]
Length=226
Score = 251 bits (641), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/219 (57%), Positives = 154/219 (71%), Gaps = 1/219 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I V V+RVFTD G GNPLG++++S V DRQ +AA GYSETIFVD+P PG A
Sbjct 1 MPIHVDVVRVFTDDKGRHGNPLGIVDSSAVPSEDRQSVAAALGYSETIFVDMPEPGDEHA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
A I TP TE+PFAGHPTVG SWWL ERG + TL VPAG V G +T + AR EWA
Sbjct 61 RAQIFTPVTELPFAGHPTVGLSWWLHERGAAVTTLDVPAGPVATRRSGAITWVRARPEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEF+++ ++S+ + +ADP F HYLW WTD+ S+R+RMFA ++G+TEDEATGA
Sbjct 121 PEFSLYPMNSVREVQSADPKKFGAG-HHYLWAWTDKVEHSIRSRMFAPDMGITEDEATGA 179
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AA+RIT +L L ITQGKGS + TT+ P GW+ V GRV
Sbjct 180 AAVRITAHLRHALLITQGKGSELRTTYDPAGWIEVGGRV 218
>gi|226366193|ref|YP_002783976.1| hypothetical protein ROP_67840 [Rhodococcus opacus B4]
gi|226244683|dbj|BAH55031.1| hypothetical protein [Rhodococcus opacus B4]
Length=226
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/219 (58%), Positives = 152/219 (70%), Gaps = 1/219 (0%)
Query 1 MAIEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTA 60
M I V V+RVFTD G GNPLG++++S V DRQ +AA GYSETIFVDLP PG A
Sbjct 1 MPIHVDVVRVFTDDKGRHGNPLGIVDSSAVPPEDRQSVAATLGYSETIFVDLPGPGDEHA 60
Query 61 HATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
A I TP TE+PFAGHP VG SWWL ERG + TL VPAG V G +T + AR EWA
Sbjct 61 RAQIFTPTTELPFAGHPIVGLSWWLHERGAAVTTLDVPAGPVTTRRSGAITWVRARPEWA 120
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGA 180
PEF+++ + S+ + AADP F HYLW WTD+ S+R+RMFA ++G+TEDEATGA
Sbjct 121 PEFSLYPMGSVREVQAADPKKFGAG-HHYLWAWTDKVEHSIRSRMFAPDMGITEDEATGA 179
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AA+RIT +L L ITQGKGS + TT+ P GW+ V GRV
Sbjct 180 AAVRITAHLRHALLITQGKGSELRTTYDPAGWIEVGGRV 218
>gi|284029688|ref|YP_003379619.1| phenazine biosynthesis protein PhzF family [Kribbella flavida
DSM 17836]
gi|283808981|gb|ADB30820.1| phenazine biosynthesis protein PhzF family [Kribbella flavida
DSM 17836]
Length=225
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/219 (48%), Positives = 136/219 (63%), Gaps = 7/219 (3%)
Query 3 IEVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
++V V+RVF DS G FGNPLG+++ +V DRQ +AAQ GYSET+FVD G
Sbjct 4 LDVQVVRVFVDSSGAFGNPLGIVDGRQVPDADRQAVAAQLGYSETVFVDEAEAGRIR--- 60
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I + E+PFAGHPTVGA+WWL +G + L+VPAG V V+ T + A + W
Sbjct 61 -IFSATAEMPFAGHPTVGAAWWLHSQGHRTDVLRVPAGEVPVTRADGYTFVRAHATWGST 119
Query 123 FAIHDLDSLDALAAADPADFPDDIAH-YLWTWTDRSAGSLRARMFAANLGVTEDEATGAA 181
F H LD+ + AA PA++ H +LW W D AG +RAR+FA +GV EDEATG+A
Sbjct 120 FDWHQLDTPPDVLAASPAEY--SAGHTFLWAWQDEPAGRVRARVFAPAMGVPEDEATGSA 177
Query 182 AIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
A ++T L R+L I QG GS + TT P+ W V GRV+
Sbjct 178 ATQLTARLGRNLHIVQGAGSELLTTLLPDDWTTVGGRVL 216
>gi|54025761|ref|YP_120003.1| hypothetical protein nfa37910 [Nocardia farcinica IFM 10152]
gi|54017269|dbj|BAD58639.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=215
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/218 (50%), Positives = 137/218 (63%), Gaps = 3/218 (1%)
Query 10 VFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATIHTPRT 69
+FTDS G GN LG+ A V D Q LAA++G+SET+ V P + A I+TP
Sbjct 1 MFTDSCGRLGNALGIARAGDVAEADHQALAARAGFSETVVV--ADPVAEVARLRIYTPAM 58
Query 70 EIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFAIHDLD 129
E+PFAGHP+VG +WWL E+GTP+ L VPAG V+V LT I AR+ WAP+F H L+
Sbjct 59 ELPFAGHPSVGTAWWLAEQGTPVRVLDVPAGPVEVQLGEGLTWIRARANWAPDFTFHQLE 118
Query 130 SLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAAIRITDYL 189
L P DF HYLW W D GS+R+RMFA +G+ ED ATGAAA+ +T L
Sbjct 119 DPAELDELRPDDFTGG-PHYLWAWADEMRGSVRSRMFAPTMGIAEDAATGAAAVALTALL 177
Query 190 SRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQL 227
+ L ITQG GS + T W +GWVR+ GRVV+D V ++
Sbjct 178 RQGLKITQGAGSQLFTEWDSDGWVRLGGRVVADSVIEI 215
>gi|148271922|ref|YP_001221483.1| hypothetical protein CMM_0743 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829852|emb|CAN00776.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length=246
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/230 (47%), Positives = 135/230 (59%), Gaps = 6/230 (2%)
Query 4 EVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVD-LPSPGSTTAHA 62
EV V+RVF D+DG GN LG++ AS +A G+SET+FVD + +PG A
Sbjct 16 EVHVVRVFADADGRHGNELGIVLASPRTDGRELAIARALGFSETVFVDAVDAPGEDPRGA 75
Query 63 TIH--TPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
+I TP E+PFAGHPTVG +WWL G P++ L+VPAGIV+V GD ++A W
Sbjct 76 SIRILTPARELPFAGHPTVGTAWWLASLGVPVDHLRVPAGIVRVDRAGDEVRVTADPAWG 135
Query 121 PEFAIHDLDS--LDALAAADPADFPDDIAH-YLWTWTDRSAGSLRARMFAANLGVTEDEA 177
PEFA H + S I H Y W W D SAG +RARM A LGV EDEA
Sbjct 136 PEFAWHPVGSAAELLALDLPALAEASGIEHLYAWAWVDESAGWIRARMSAPALGVPEDEA 195
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQL 227
TG+AA+R+T +L R L ITQG+GS + T +G V GR V+D V L
Sbjct 196 TGSAALRVTAHLGRGLRITQGRGSELVTRLLDDGRAEVGGRTVADRVIPL 245
>gi|170782571|ref|YP_001710904.1| hypothetical protein CMS_2228 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157140|emb|CAQ02320.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=237
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/235 (45%), Positives = 134/235 (58%), Gaps = 20/235 (8%)
Query 4 EVSVLRVFTDSDGNFGNPLGVINASKVEHRDRQQLAAQSGYSETIFVD-LPSPGSTTAHA 62
EV V+RVF D+ G GN LG++ AS Q +A G+SET+FVD + +PG+ A
Sbjct 11 EVHVVRVFADAHGAHGNELGIVLASPRTDGREQAIAQALGFSETVFVDEVDAPGADPLGA 70
Query 63 TIH--TPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWA 120
I TP E+PFAGHPTVG +WWL RG ++ L+VPAG+V V+ A W
Sbjct 71 AIRILTPARELPFAGHPTVGTAWWLASRGIDVDHLRVPAGVVDVT---------ADPAWG 121
Query 121 PEFAIHDLDSLDALAAADPADFPDDIAH--------YLWTWTDRSAGSLRARMFAANLGV 172
P+FA +L S+ L A D D Y W W D +AG++RARM A LGV
Sbjct 122 PDFAWQELPSVADLLALDLQAAVADATAADARVDHLYAWAWIDEAAGTIRARMSAPALGV 181
Query 173 TEDEATGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVSDGVAQL 227
EDEATG+AA+R+T L RDL ITQG+GS + T +G V GR V D V L
Sbjct 182 LEDEATGSAALRVTARLGRDLRITQGRGSELATRLLDDGRAEVGGRTVPDRVIPL 236
>gi|29832472|ref|NP_827106.1| hypothetical protein SAV_5929 [Streptomyces avermitilis MA-4680]
gi|29609591|dbj|BAC73641.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=214
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/220 (45%), Positives = 123/220 (56%), Gaps = 20/220 (9%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF G +GN LGV+ V E DRQ LAA+ G+SET+FVD P G I
Sbjct 6 VLRVFCGPGGGYGNELGVVREGSVLPECADRQALAAKLGFSETVFVDDPERGVID----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
+TP +PFAGHP VG +W L + L PAG+V G+ + I AR EWAP
Sbjct 62 YTPTLRLPFAGHPCVGTAWLLD-----VPELVTPAGVVGTRLDGEFSWIEARPEWAPPRT 116
Query 125 IHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAA-NLGVTEDEATGA 180
+ + +DAL P ++ Y W W D +AG +RAR F + G+ EDEATGA
Sbjct 117 LRQYATAAEVDALPVPPPGEW-----VYAWAWEDEAAGRVRARAFPGRDDGIEEDEATGA 171
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
AA+ +TD L R L I QG+GS I T P GWV V GRV+
Sbjct 172 AALLLTDRLGRALNIIQGRGSQILTAPQPAGWVEVGGRVL 211
>gi|302550973|ref|ZP_07303315.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468591|gb|EFL31684.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces viridochromogenes
DSM 40736]
Length=214
Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/219 (45%), Positives = 121/219 (56%), Gaps = 20/219 (9%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF +G +GN LGV+ V E R+RQ AA+ G+SET+FVD P G+ I
Sbjct 6 VLRVFCGPNGGYGNELGVVREGSVLPEERERQAFAAKLGFSETVFVDDPERGAID----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
+TP +PFAGHP VG +W L + L PAG+V G+ I AR+EW P
Sbjct 62 YTPTLRLPFAGHPCVGTAWLLD-----VPELVTPAGVVGARQDGEFCWIEARAEWVPART 116
Query 125 IHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAA-NLGVTEDEATGA 180
+ S +D LA P ++ Y W W D AG +RAR F + G+ EDEATGA
Sbjct 117 LRQYGSAAEVDDLAVPPPGEW-----VYAWAWEDEPAGRVRARAFPGRDDGIDEDEATGA 171
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AA+ +TD L R L ITQG GS I T P GW V GRV
Sbjct 172 AALLLTDRLGRALNITQGAGSQILTAPQPGGWTEVGGRV 210
>gi|291440011|ref|ZP_06579401.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces ghanaensis
ATCC 14672]
gi|291342906|gb|EFE69862.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces ghanaensis
ATCC 14672]
Length=214
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/222 (45%), Positives = 123/222 (56%), Gaps = 20/222 (9%)
Query 4 EVSVLRVFTDSDGNFGNPLGVI-NASKVEHRD-RQQLAAQSGYSETIFVDLPSPGSTTAH 61
+ VLRVF G +GN LGV+ N S + RD RQ+ AA+ G+SET+FVD P G
Sbjct 3 DYDVLRVFCGPRGGYGNELGVVRNGSVMPERDERQEFAAKLGFSETVFVDDPERGVID-- 60
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I+TP +PFAGHP VG +W L + L VPAG++ G+ I AR+EWAP
Sbjct 61 --IYTPTLRLPFAGHPCVGTAWLLD-----VPELVVPAGVMGARQDGEFCWIEARAEWAP 113
Query 122 EFAIHDLDSLDALAAADPADFPDDIAH---YLWTWTDRSAGSLRARMFAA-NLGVTEDEA 177
+ + AA+ D P Y W W D AG +RAR F + G+ EDEA
Sbjct 114 PRTLRQYAT-----AAEVDDLPVPPKGEWIYAWAWLDEPAGRIRARAFPGRDDGIEEDEA 168
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
TGAAA+ +TD L R L ITQG GS I T PEGW + GRV
Sbjct 169 TGAAALLLTDRLGRALNITQGTGSQILTAPQPEGWTEIGGRV 210
>gi|294812329|ref|ZP_06770972.1| Phenazine biosynthesis PhzC/PhzF protein [Streptomyces clavuligerus
ATCC 27064]
gi|326440837|ref|ZP_08215571.1| hypothetical protein SclaA2_07203 [Streptomyces clavuligerus
ATCC 27064]
gi|294324928|gb|EFG06571.1| Phenazine biosynthesis PhzC/PhzF protein [Streptomyces clavuligerus
ATCC 27064]
Length=251
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 124/220 (57%), Gaps = 17/220 (7%)
Query 5 VSVLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VL VF D+DG GN LGV+ + + RQ LA + G+SET+FVD P G+
Sbjct 10 LDVLHVFCDADGRHGNALGVVRDPRACPDPAARQALADELGFSETVFVDDPERGTVD--- 66
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I+TP +PFAGHP VGA+W L + L PAG V G+ T I+AR EWAP
Sbjct 67 -IYTPGARLPFAGHPLVGAAWLLD-----LAELNPPAGTVWARGDGEFTWITARPEWAPP 120
Query 123 FAIHDLDSLDALAAAD--PADFPDDIAHYLWTWTDRSAGSLRARMFAANLG-VTEDEATG 179
+L+ AA D P+ P D Y W W D AG +RAR F G V EDEATG
Sbjct 121 ---RNLERFPTPAAVDALPSPPPGDGWLYAWAWEDEPAGRIRARAFPRRPGGVVEDEATG 177
Query 180 AAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AAA+ +T+ L R L ITQG+GS I T P+G V + GRV
Sbjct 178 AAALLLTERLGRALNITQGRGSQILTAPGPDGTVEIGGRV 217
>gi|239987251|ref|ZP_04707915.1| hypothetical protein SrosN1_08097 [Streptomyces roseosporus NRRL
11379]
Length=254
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/221 (43%), Positives = 123/221 (56%), Gaps = 15/221 (6%)
Query 5 VSVLRVFTDSDGNFGNPLGVIN--ASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF DG +GN LGV+ + + RQ+L Q G+SET+FVD P G
Sbjct 39 IDVLRVFCGPDGRYGNALGVVRDGSGHPDEASRQRLTRQLGFSETVFVDDPERG----RV 94
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
IHTP +PFAGHP VGA+W L + L++ G V G+ T I+AR EWAP
Sbjct 95 DIHTPGLRLPFAGHPLVGAAWLLD-----LEILELAVGDVFARQDGEFTWITARPEWAPP 149
Query 123 FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMF---AANLGVTEDEATG 179
+ S + A P P + Y W W D +AG +RAR F G+ EDEATG
Sbjct 150 RTLQQYASAAEIEAL-PGPPPGEGWLYAWAWEDEAAGRVRARAFPRRGGETGIVEDEATG 208
Query 180 AAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
AAA+ ++ +L R L ITQG+GS I T +P+G V V GRV+
Sbjct 209 AAAMLLSAHLGRALNITQGRGSQILTAPAPDGTVEVGGRVL 249
>gi|291444211|ref|ZP_06583601.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces roseosporus
NRRL 15998]
gi|291347158|gb|EFE74062.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces roseosporus
NRRL 15998]
Length=225
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/221 (43%), Positives = 123/221 (56%), Gaps = 15/221 (6%)
Query 5 VSVLRVFTDSDGNFGNPLGVI--NASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF DG +GN LGV+ + + RQ+L Q G+SET+FVD P G
Sbjct 10 IDVLRVFCGPDGRYGNALGVVRDGSGHPDEASRQRLTRQLGFSETVFVDDPERG----RV 65
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
IHTP +PFAGHP VGA+W L + L++ G V G+ T I+AR EWAP
Sbjct 66 DIHTPGLRLPFAGHPLVGAAWLLD-----LEILELAVGDVFARQDGEFTWITARPEWAPP 120
Query 123 FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMF---AANLGVTEDEATG 179
+ S + A P P + Y W W D +AG +RAR F G+ EDEATG
Sbjct 121 RTLQQYASAAEIEAL-PGPPPGEGWLYAWAWEDEAAGRVRARAFPRRGGETGIVEDEATG 179
Query 180 AAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
AAA+ ++ +L R L ITQG+GS I T +P+G V V GRV+
Sbjct 180 AAAMLLSAHLGRALNITQGRGSQILTAPAPDGTVEVGGRVL 220
>gi|21220737|ref|NP_626516.1| hypothetical protein SCO2268 [Streptomyces coelicolor A3(2)]
gi|6469253|emb|CAB61714.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length=214
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/217 (45%), Positives = 119/217 (55%), Gaps = 16/217 (7%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF +G +GN LGV+ V E RQ+LAA+ G+SET+FVD P G I
Sbjct 6 VLRVFCAPNGGYGNELGVVRDGSVLPEPERRQELAAKLGFSETVFVDDPERGVVD----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
+TP +PFAGHP VG +W L + L AG+V G+ + I AR EWAP
Sbjct 62 YTPTLRLPFAGHPCVGTAWLLD-----VPELVTRAGVVGARLDGEFSWIEARPEWAPP-- 114
Query 125 IHDLDSLDALAAADPADFPDDIAH-YLWTWTDRSAGSLRARMFAA-NLGVTEDEATGAAA 182
L A+A D P Y W W D +AG +RAR F + G+ EDEATGAAA
Sbjct 115 -RTLRQYAAVAEVDDLAVPPKGEWVYAWAWEDEAAGRVRARAFPGRDDGIDEDEATGAAA 173
Query 183 IRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
+ +T L R L ITQG GS I T PEGWV + GRV
Sbjct 174 LLLTGRLGRALNITQGVGSQILTAPQPEGWVEIGGRV 210
>gi|289772004|ref|ZP_06531382.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces lividans
TK24]
gi|289702203|gb|EFD69632.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces lividans
TK24]
Length=214
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/216 (44%), Positives = 120/216 (56%), Gaps = 14/216 (6%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF +G +GN LGV+ V E RQ+LAA+ G+SET+FVD P G I
Sbjct 6 VLRVFCAPNGGYGNELGVVRDGSVLPEPERRQELAAKLGFSETVFVDDPERGVVD----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
+TP +PFAGHP VG +W L + L AG+V G+ + I AR EWAP
Sbjct 62 YTPTLRLPFAGHPCVGTAWLLD-----VPELVTRAGVVGARLDGEFSWIEARPEWAPPRT 116
Query 125 IHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAA-NLGVTEDEATGAAAI 183
+ ++ + D A P Y W W D +AG +RAR F + G+ EDEATGAAA+
Sbjct 117 LRQYATVAEVD--DLAVPPKGEWVYAWAWEDEAAGRVRARAFPGRDDGIDEDEATGAAAL 174
Query 184 RITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
+T L R L ITQG GS I T PEGWV + GRV
Sbjct 175 LLTGRLGRALNITQGVGSQILTAPQPEGWVEIGGRV 210
>gi|290960984|ref|YP_003492166.1| hypothetical protein SCAB_66271 [Streptomyces scabiei 87.22]
gi|260650510|emb|CBG73626.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=214
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/222 (43%), Positives = 120/222 (55%), Gaps = 20/222 (9%)
Query 4 EVSVLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAH 61
+ VLRVF G +GN LGV+ V + DRQ+ AA+ G+SET+FVD P G
Sbjct 3 DFDVLRVFCGPRGGYGNELGVVREGSVMPDRADRQEFAAKLGFSETVFVDDPERGVID-- 60
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I+TP +PFAG+P VGA+W L + L PAG+V G+ + I A EWAP
Sbjct 61 --IYTPSLRLPFAGYPCVGAAWLLD-----VPELVTPAGVVGARLDGEFSWIEALPEWAP 113
Query 122 EFAIHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEA 177
S +D L P ++ Y W W D +AG +RAR F G+ EDEA
Sbjct 114 PRTFRQYASAAEVDDLRVPPPGEW-----VYAWAWEDEAAGRVRARAFPGRGDGIDEDEA 168
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
TGAAA+++T L R L ITQG GS + T P GWV V GRV
Sbjct 169 TGAAALQLTARLGRALNITQGTGSQLLTAPQPHGWVEVGGRV 210
>gi|108804873|ref|YP_644810.1| phenazine biosynthesis PhzC/PhzF protein [Rubrobacter xylanophilus
DSM 9941]
gi|108766116|gb|ABG04998.1| Phenazine biosynthesis PhzC/PhzF protein [Rubrobacter xylanophilus
DSM 9941]
Length=227
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/219 (43%), Positives = 121/219 (56%), Gaps = 8/219 (3%)
Query 5 VSVLRVFTDSDGNFGNPLGV-INASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHAT 63
+ VL+VF G GNPLGV ++ +V RQ++AA G+SET+FVD +
Sbjct 4 LHVLKVFVGEGGGGGNPLGVFLDGGEVPEGARQRVAASLGFSETVFVD----DAGRGELR 59
Query 64 IHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEF 123
I TP+ E+PFAGHP VG +W L G + L+ PAG V V GDL ++ R EWAP F
Sbjct 60 IFTPQAELPFAGHPLVGTAWLLLREGHEVQALRPPAGEVAVRRDGDLVFVAGRPEWAPPF 119
Query 124 AIHDLDSLDALAA-ADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLGVTEDEATGAAA 182
L+ + A P + D + +W W D AG +RAR+FA LG+ EDEATG+ A
Sbjct 120 EHLRLEHPGEVEALGGPPEGHDLVG--VWAWEDERAGRVRARVFAPRLGIPEDEATGSHA 177
Query 183 IRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVVS 221
R+ L R + I QG+GS I P G V V GR V
Sbjct 178 ARLAALLGRPVVIRQGRGSEILARPLPGGAVEVGGRTVQ 216
>gi|333027545|ref|ZP_08455609.1| putative phenazine biosynthesis PhzC/PhzF protein [Streptomyces
sp. Tu6071]
gi|332747397|gb|EGJ77838.1| putative phenazine biosynthesis PhzC/PhzF protein [Streptomyces
sp. Tu6071]
Length=223
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/221 (44%), Positives = 122/221 (56%), Gaps = 19/221 (8%)
Query 5 VSVLRVFTDSDGNFGNPLGVI--NASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF D+ G GN LGV+ A +RQ LAA+ GYSET+FVD P G
Sbjct 9 LDVLRVFCDAAGRHGNALGVVREGARFPGDAERQALAARLGYSETVFVDDPERGVLD--- 65
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I TP T +PFAGHP VG +W L + L PAG V+ G+ T I+AR+ WA +
Sbjct 66 -IRTPGTALPFAGHPLVGCAWLLD-----LPALAPPAGPVEARSDGEFTWITARAAWAAD 119
Query 123 ---FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEAT 178
+ +DAL P P D Y W W D +AG +RAR F G+ EDEAT
Sbjct 120 RVPVRCGSPEEVDAL----PVPAPGDGWRYAWAWEDEAAGRVRARGFPGRGDGIDEDEAT 175
Query 179 GAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
G+AAI +T +L R L I QG+GS + T P+G V + GRV
Sbjct 176 GSAAIALTAHLGRALNIRQGRGSQLLTAPGPDGLVELGGRV 216
>gi|302518681|ref|ZP_07271023.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces sp. SPB78]
gi|302427576|gb|EFK99391.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces sp. SPB78]
Length=223
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/221 (44%), Positives = 122/221 (56%), Gaps = 19/221 (8%)
Query 5 VSVLRVFTDSDGNFGNPLGVI--NASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF D+ G GN LGV+ A +RQ LAA+ GYSET+FVD P G
Sbjct 9 LDVLRVFCDAAGRHGNALGVVREGARFPGDAERQALAARLGYSETVFVDDPERGVLD--- 65
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I TP T +PFAGHP VG +W L + L PAG V+ G+ T I+AR+ WA +
Sbjct 66 -IRTPGTALPFAGHPLVGCAWLLD-----LPELAPPAGPVEARSDGEFTWITARAAWAAD 119
Query 123 ---FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEAT 178
+ +DAL P P D Y W W D +AG +RAR F G+ EDEAT
Sbjct 120 RVPVRCGSPEEVDAL----PVPAPGDGWRYAWAWEDEAAGRVRARGFPGRGDGIDEDEAT 175
Query 179 GAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
G+AAI +T +L R L I QG+GS + T P+G V + GRV
Sbjct 176 GSAAIALTAHLGRALNIRQGRGSQLLTAPGPDGLVELGGRV 216
>gi|297199242|ref|ZP_06916639.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces sviceus
ATCC 29083]
gi|197716425|gb|EDY60459.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces sviceus
ATCC 29083]
Length=214
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/219 (43%), Positives = 118/219 (54%), Gaps = 20/219 (9%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF +G +GN LGV+ V + +RQ AA+ G+SET+FVD P G I
Sbjct 6 VLRVFCAPNGGYGNELGVVREGSVMPDRDERQAFAAKLGFSETVFVDDPERGVID----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
+TP + FAG+P VGA+W L + L PAG+V G+ + I AR+EWA
Sbjct 62 YTPSARLAFAGYPCVGAAWLLD-----VPELVTPAGVVGTRLDGEFSWIEARAEWAAPRT 116
Query 125 IHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEATGA 180
+ +D LA P + Y W W D +AG +RAR F GV EDEATGA
Sbjct 117 FRQYGTAAEVDDLAVPAPGAW-----IYAWAWEDEAAGRIRARGFPGRGDGVEEDEATGA 171
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AA+++T L R L I QG GS I T P GWV V GRV
Sbjct 172 AALQLTAELGRALNIVQGAGSQILTAPQPGGWVEVGGRV 210
>gi|318062710|ref|ZP_07981431.1| hypothetical protein SSA3_32564 [Streptomyces sp. SA3_actG]
Length=223
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/221 (43%), Positives = 121/221 (55%), Gaps = 19/221 (8%)
Query 5 VSVLRVFTDSDGNFGNPLGVI--NASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF D+ G GN LGV+ A +RQ LAA+ GYSET+FVD P G
Sbjct 9 LDVLRVFCDAAGRHGNALGVVREGARFPGDAERQALAARLGYSETVFVDDPERGVLD--- 65
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I TP T +PFAGHP VG +W L + L PAG V+ G+ T I+AR+ WA +
Sbjct 66 -IRTPGTALPFAGHPLVGCAWLLD-----LPELAPPAGPVEARSDGEFTWITARAAWAAD 119
Query 123 ---FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEAT 178
+ +DAL P P Y W W D +AG +RAR F G+ EDEAT
Sbjct 120 RVPVRCGSPEEVDAL----PVPAPGGGWRYAWAWEDEAAGRVRARGFPGRGDGIDEDEAT 175
Query 179 GAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
G+AAI +T +L R L I QG+GS + T P+G V + GRV
Sbjct 176 GSAAIALTAHLGRALNIRQGRGSQLLTAPGPDGLVELGGRV 216
>gi|318080648|ref|ZP_07987980.1| hypothetical protein SSA3_29146 [Streptomyces sp. SA3_actF]
Length=263
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/221 (43%), Positives = 121/221 (55%), Gaps = 19/221 (8%)
Query 5 VSVLRVFTDSDGNFGNPLGVI--NASKVEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF D+ G GN LGV+ A +RQ LAA+ GYSET+FVD P G
Sbjct 49 LDVLRVFCDAAGRHGNALGVVREGARFPGDAERQALAARLGYSETVFVDDPERGVLD--- 105
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I TP T +PFAGHP VG +W L + L PAG V+ G+ T I+AR+ WA +
Sbjct 106 -IRTPGTALPFAGHPLVGCAWLLD-----LPELAPPAGPVEARSDGEFTWITARAAWAAD 159
Query 123 ---FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEAT 178
+ +DAL P P Y W W D +AG +RAR F G+ EDEAT
Sbjct 160 RVPVRCGSPEEVDAL----PVPAPGGGWRYAWAWEDEAAGRVRARGFPGRGDGIDEDEAT 215
Query 179 GAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
G+AAI +T +L R L I QG+GS + T P+G V + GRV
Sbjct 216 GSAAIALTAHLGRALNIRQGRGSQLLTAPGPDGLVELGGRV 256
>gi|295839293|ref|ZP_06826226.1| PhzF family phenazine biosynthesis protein [Streptomyces sp.
SPB74]
gi|295827397|gb|EFG65369.1| PhzF family phenazine biosynthesis protein [Streptomyces sp.
SPB74]
Length=223
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/222 (44%), Positives = 119/222 (54%), Gaps = 19/222 (8%)
Query 4 EVSVLRVFTDSDGNFGNPLGVINASKVEHRD--RQQLAAQSGYSETIFVDLPSPGSTTAH 61
++ VLRVF D+ G GN LGV+ D RQ LAA+ GYSET+FVD P G
Sbjct 8 DLDVLRVFCDAAGRHGNALGVVRDGPRLPGDAERQALAARLGYSETVFVDDPERGVLD-- 65
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I TP +PFAGHP VG +W L + L PAG V+ G+ T I+AR+ WA
Sbjct 66 --IRTPGGALPFAGHPLVGCAWLLD-----LPELAPPAGRVEARSDGESTWITARAAWAA 118
Query 122 E---FAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEA 177
E + +DAL P P Y W W D +AG +RAR F G+ EDEA
Sbjct 119 ERVPVRYGSPEEIDAL----PVPAPGRGWQYAWAWEDETAGRVRARGFPGRGDGIDEDEA 174
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
TGAAAI +T +L R L I QG+GS + T P G V + GRV
Sbjct 175 TGAAAIALTAHLGRALNIRQGRGSQLLTAPGPAGLVELGGRV 216
>gi|302560967|ref|ZP_07313309.1| PhzF family phenazine biosynthesis protein [Streptomyces griseoflavus
Tu4000]
gi|302478585|gb|EFL41678.1| PhzF family phenazine biosynthesis protein [Streptomyces griseoflavus
Tu4000]
Length=214
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/222 (45%), Positives = 118/222 (54%), Gaps = 20/222 (9%)
Query 4 EVSVLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAH 61
+ VLRVF G +GN LGV+ V DRQ+ AA+ G+SET+FVD P G
Sbjct 3 DYDVLRVFCGPRGGYGNELGVVRDGSVLPGRDDRQEFAAKLGFSETVFVDDPERGVID-- 60
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I+TP +PFAGHP VG W L + L VPAG+V G+ I AR+EW P
Sbjct 61 --IYTPTLRLPFAGHPCVGTGWLLD-----VPELVVPAGVVGTRQDGEFCWIEARAEWVP 113
Query 122 EFAIHDLDSLDALAAADPADFPDDIAH---YLWTWTDRSAGSLRARMFAA-NLGVTEDEA 177
+ S AA+ D P Y W W D AG +RAR F + G+ EDEA
Sbjct 114 PRTLRQYTS-----AAEVDDLPVPPKGEWIYAWAWLDEPAGRVRARAFPGRDDGIDEDEA 168
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
TGAAA+ +TD L R L ITQG GS I T PEGW V GRV
Sbjct 169 TGAAALLLTDLLGRALNITQGTGSQILTAPQPEGWTEVGGRV 210
>gi|320011116|gb|ADW05966.1| Phenazine biosynthesis PhzC/PhzF protein [Streptomyces flavogriseus
ATCC 33331]
Length=242
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/237 (39%), Positives = 126/237 (54%), Gaps = 34/237 (14%)
Query 5 VSVLRVFTDSDGNFGNPLGVINASK--VEHRDRQQLAAQSGYSETIFVDLPSPGSTTAHA 62
+ VLRVF DG+ GN LGV+ + ++ RQ LA + G+SET+FVD P G+
Sbjct 14 IDVLRVFCGPDGSNGNALGVVRDGRRYPDNDSRQALARKLGFSETVFVDDPERGTVD--- 70
Query 63 TIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPE 122
I TP +PFAGHP VGA+W L + L++P G V G+ T I+ R EWAP
Sbjct 71 -IRTPGLRLPFAGHPLVGAAWLLD-----LEILELPIGDVTARQDGEFTWITGRPEWAPP 124
Query 123 FAIHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAAN---------- 169
+ S ++AL P + Y+W W D +AG +RAR F +
Sbjct 125 RTLEQYASAAEVEALTGPPPGEG----RLYVWAWEDEAAGRVRARSFPRSSEEPGDSRSG 180
Query 170 ------LGVTEDEATGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
G EDEATGAAA++++ L R L ITQG+GS I T +P+G + V GRV+
Sbjct 181 GAGAHAGGTDEDEATGAAAMQLSAELGRALNITQGRGSQILTAPAPDGTMEVGGRVL 237
>gi|182439035|ref|YP_001826754.1| hypothetical protein SGR_5242 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467551|dbj|BAG22071.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=225
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/222 (42%), Positives = 123/222 (56%), Gaps = 17/222 (7%)
Query 5 VSVLRVFTDSDGNFGNPLGVINASKVEHRD---RQQLAAQSGYSETIFVDLPSPGSTTAH 61
+ VLRVF DG +GN LGV+ + +H D RQ LA + G++ET+FVD P G
Sbjct 10 IDVLRVFCGPDGRYGNALGVVRDGR-DHPDEASRQLLARRLGFAETVFVDDPERG----R 64
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
IHTP +PFAGHP VGA+W L + L++ G V G+ T I+AR EW P
Sbjct 65 VDIHTPGLRLPFAGHPLVGAAWLLD-----LEILELAVGDVFARQDGEFTWITARPEWVP 119
Query 122 EFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMF---AANLGVTEDEAT 178
+ S + A + P + Y W W D +AG +RAR F G+ EDEAT
Sbjct 120 PRTLQQYGSAAEVEALE-GPPPGEGWLYAWAWEDEAAGRVRARAFPRRGQEGGIVEDEAT 178
Query 179 GAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRVV 220
GAAA+ ++ L R L ITQG+GS I T +P+G V V GRV+
Sbjct 179 GAAALLLSARLGRALNITQGRGSQILTAPAPDGTVEVGGRVL 220
>gi|297194713|ref|ZP_06912111.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152407|gb|EFH31723.1| phenazine biosynthesis PhzC/PhzF protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=217
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/218 (43%), Positives = 121/218 (56%), Gaps = 21/218 (9%)
Query 5 VSVLRVFTDSDGNFGNPLGVINASKVEHRDR---QQLAAQSGYSETIFVDLPSPGSTTAH 61
+ VL VF DG GN LGV+ ++ H DR Q LAA+ G+SET+FVD P G+
Sbjct 13 LDVLHVFCGGDGRHGNALGVVRDAR-RHPDRGARQALAAELGFSETVFVDDPERGTVD-- 69
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I+TP + FAGHP VG +W L + ++ PAG V V G+ T I+AR+EWAP
Sbjct 70 --IYTPTQRLLFAGHPLVGVAWLLD-----LQAVRPPAGEVWVRDDGEFTWITARAEWAP 122
Query 122 EFAIHDLDS---LDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANLG-VTEDEA 177
+ S +DAL PA+ Y W W D +AG +RAR F EDEA
Sbjct 123 PRRLVRYASPAEVDALPVPSPAEG----RLYAWAWQDEAAGRVRARAFGPRGDHAVEDEA 178
Query 178 TGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRV 215
TGAAA+ +T+ L R L ITQG+GS I T P+G V +
Sbjct 179 TGAAALLLTERLGRALNITQGRGSQILTAPGPDGIVEI 216
>gi|337769527|emb|CCB78240.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=225
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/219 (46%), Positives = 125/219 (58%), Gaps = 8/219 (3%)
Query 4 EVSVLRVFTDSDGNFGNPLGVI-NASKVEHR-DRQQLAAQSGYSETIFVDLPSPGSTTAH 61
++ VLRVF DG GN LGV+ + + + R +RQ+ AA+ G+SET+F+D P G
Sbjct 3 DLVVLRVFLGPDGGGGNLLGVVPDGTALPGRPERQERAARLGFSETVFIDDPVRGEVD-- 60
Query 62 ATIHTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAP 121
I+TP T +PFAGHP VG SW LR G L+ PAG V G+ I R+EWA
Sbjct 61 --IYTPSTRLPFAGHPLVGTSWLLRRDGHDPAVLRPPAGEVAAWREGEFDWIRGRAEWAA 118
Query 122 EFAIHDLDSLDALAAADPADFPDDIAHYLWTWTDRSAGSLRARMFAANL-GVTEDEATGA 180
DS+ A A PA P + Y W W D +AG +RAR F G+TEDEATGA
Sbjct 119 GRRTQRYDSV-AEVDALPAPPPGEGWLYAWAWQDEAAGVVRARGFPRRSDGITEDEATGA 177
Query 181 AAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAGRV 219
AA+ +T L R L I QG GS I T P+GW+ V GRV
Sbjct 178 AAVVLTAELGRPLDIRQGAGSQILTRHHPDGWIDVGGRV 216
>gi|329934896|ref|ZP_08284937.1| phenazine biosynthesis protein [Streptomyces griseoaurantiacus
M045]
gi|329305718|gb|EGG49574.1| phenazine biosynthesis protein [Streptomyces griseoaurantiacus
M045]
Length=242
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/243 (41%), Positives = 125/243 (52%), Gaps = 38/243 (15%)
Query 7 VLRVFTDSDGNFGNPLGVINASKV--EHRDRQQLAAQSGYSETIFVDLPSPGSTTAHATI 64
VLRVF ++ +GN L V+ E +RQ LAA+ G+SET+FVD P G I
Sbjct 6 VLRVFCGANTGYGNELAVVRKGSTVPEPEERQALAAELGFSETVFVDDPERGIID----I 61
Query 65 HTPRTEIPFAGHPTVGASWWLRERGTPINTLQVPAGIVQVSYHGDLTAISARSEWAPEFA 124
HTP +PFAGHP VG +W L + L PAG+V G+ T I AR EW P
Sbjct 62 HTPTLRLPFAGHPCVGTAWLLD-----VPELVTPAGVVGTRLDGEFTWIEARPEWVPPRT 116
Query 125 IHDLDS---LDALAAADPADF------PDDI--AHYLWTWTDRSAGSLRARMFAANL--- 170
+ S ++ALA P + PD++ Y W W D +AG +RAR F
Sbjct 117 LRQYASAAEVEALAVPSPGERGETGVPPDEVWGRIYAWAWEDEAAGRVRARAFRGRTDER 176
Query 171 -------------GVTEDEATGAAAIRITDYLSRDLTITQGKGSLIHTTWSPEGWVRVAG 217
G+ EDEATGAAA+ +T L R L ITQG+GS + T PEGWV V G
Sbjct 177 GAGRSGGAGARTGGIEEDEATGAAALLLTARLGRALNITQGRGSQLLTAPQPEGWVEVGG 236
Query 218 RVV 220
RVV
Sbjct 237 RVV 239
Lambda K H
0.317 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 294240045594
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40