BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2718c
Length=154
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609855|ref|NP_217234.1| transcriptional regulator NrdR [Myc... 310 6e-83
gi|308369839|ref|ZP_07419237.2| hypothetical protein TMBG_02855 ... 309 7e-83
gi|344220545|gb|AEN01176.1| transcriptional regulator NrdR [Myco... 308 2e-82
gi|183982008|ref|YP_001850299.1| membrane-associated regulatory ... 295 2e-78
gi|118618682|ref|YP_907014.1| transcriptional regulator NrdR [My... 293 7e-78
gi|296171813|ref|ZP_06852927.1| iron oxidase [Mycobacterium para... 290 7e-77
gi|240169680|ref|ZP_04748339.1| membrane-associated regulatory p... 290 7e-77
gi|342858413|ref|ZP_08715068.1| NrdR family transcriptional regu... 287 4e-76
gi|41408932|ref|NP_961768.1| transcriptional regulator NrdR [Myc... 287 4e-76
gi|120403433|ref|YP_953262.1| transcriptional regulator NrdR [My... 285 2e-75
gi|145224535|ref|YP_001135213.1| transcriptional regulator NrdR ... 285 2e-75
gi|108799137|ref|YP_639334.1| transcriptional regulator NrdR [My... 283 5e-75
gi|254821023|ref|ZP_05226024.1| transcriptional regulator NrdR [... 283 8e-75
gi|169630119|ref|YP_001703768.1| transcriptional regulator NrdR ... 278 2e-73
gi|118468724|ref|YP_887076.1| NrdR family transcriptional regula... 277 4e-73
gi|226366185|ref|YP_002783968.1| hypothetical protein ROP_67760 ... 273 9e-72
gi|312139401|ref|YP_004006737.1| ribonucleotide reductase regula... 273 9e-72
gi|325672715|ref|ZP_08152411.1| iron oxidase [Rhodococcus equi A... 272 1e-71
gi|111023748|ref|YP_706720.1| hypothetical protein RHA1_ro06790 ... 272 1e-71
gi|226306265|ref|YP_002766225.1| hypothetical protein RER_27780 ... 263 5e-69
gi|229490812|ref|ZP_04384647.1| transcriptional repressor NrdR [... 262 1e-68
gi|15827481|ref|NP_301744.1| transcriptional regulator NrdR [Myc... 261 2e-68
gi|54025768|ref|YP_120010.1| transcriptional regulator NrdR [Noc... 259 7e-68
gi|333919396|ref|YP_004492977.1| transcriptional repressor NrdR ... 254 4e-66
gi|159037048|ref|YP_001536301.1| transcriptional regulator NrdR ... 242 2e-62
gi|145593999|ref|YP_001158296.1| transcriptional regulator NrdR ... 241 3e-62
gi|302866052|ref|YP_003834689.1| ATP-cone domain-containing prot... 237 4e-61
gi|291302020|ref|YP_003513298.1| ATP-cone domain-containing prot... 236 6e-61
gi|258654102|ref|YP_003203258.1| ATP-cone domain-containing prot... 236 6e-61
gi|302525527|ref|ZP_07277869.1| transcriptional regulator NrdR [... 236 7e-61
gi|257056734|ref|YP_003134566.1| transcriptional regulator NrdR ... 236 7e-61
gi|238063473|ref|ZP_04608182.1| nrdR family transcriptional repr... 236 7e-61
gi|300784300|ref|YP_003764591.1| NrdR family transcriptional reg... 236 8e-61
gi|330466450|ref|YP_004404193.1| transcriptional regulator NrdR ... 235 1e-60
gi|315502611|ref|YP_004081498.1| ATP-cone domain-containing prot... 235 2e-60
gi|262202157|ref|YP_003273365.1| ATP-cone domain-containing prot... 234 5e-60
gi|317506474|ref|ZP_07964275.1| transcriptional regulator NrdR [... 233 6e-60
gi|343926989|ref|ZP_08766477.1| transcriptional repressor NrdR [... 231 2e-59
gi|296393373|ref|YP_003658257.1| ATP-cone domain-containing prot... 231 3e-59
gi|256375569|ref|YP_003099229.1| ATP-cone domain-containing prot... 229 1e-58
gi|331695963|ref|YP_004332202.1| transcriptional repressor nrdR ... 228 2e-58
gi|117928684|ref|YP_873235.1| ribonucleotide reductase regulator... 228 2e-58
gi|269125829|ref|YP_003299199.1| ATP-cone domain-containing prot... 228 2e-58
gi|284992285|ref|YP_003410839.1| ATPase domain-containing protei... 228 3e-58
gi|271968372|ref|YP_003342568.1| ATP-cone domain-containing prot... 228 3e-58
gi|296270390|ref|YP_003653022.1| ATP-cone domain-containing prot... 228 3e-58
gi|254391043|ref|ZP_05006251.1| transcriptional repressor nrdR [... 226 1e-57
gi|229820917|ref|YP_002882443.1| ATP-cone domain-containing prot... 225 1e-57
gi|134098344|ref|YP_001104005.1| ribonucleotide reductase regula... 224 3e-57
gi|256832288|ref|YP_003161015.1| ATP-cone domain-containing prot... 224 3e-57
>gi|15609855|ref|NP_217234.1| transcriptional regulator NrdR [Mycobacterium tuberculosis H37Rv]
gi|15842256|ref|NP_337293.1| transcriptional regulator NrdR [Mycobacterium tuberculosis CDC1551]
gi|31793890|ref|NP_856383.1| transcriptional regulator NrdR [Mycobacterium bovis AF2122/97]
82 more sequence titles
Length=154
Score = 310 bits (793), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS
Sbjct 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
>gi|308369839|ref|ZP_07419237.2| hypothetical protein TMBG_02855 [Mycobacterium tuberculosis SUMu002]
gi|308326301|gb|EFP15152.1| hypothetical protein TMBG_02855 [Mycobacterium tuberculosis SUMu002]
Length=166
Score = 309 bits (792), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 13 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 72
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA
Sbjct 73 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 132
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS
Sbjct 133 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 166
>gi|344220545|gb|AEN01176.1| transcriptional regulator NrdR [Mycobacterium tuberculosis CTRI-2]
Length=154
Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/154 (99%), Positives = 153/154 (99%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRA GSPEIPSHDVGLAILGPLRELDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAVGSPEIPSHDVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS
Sbjct 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
>gi|183982008|ref|YP_001850299.1| membrane-associated regulatory protein [Mycobacterium marinum
M]
gi|183175334|gb|ACC40444.1| membrane-associated regulatory protein [Mycobacterium marinum
M]
Length=205
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/154 (95%), Positives = 149/154 (97%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGV+EPFSR
Sbjct 52 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVSEPFSR 111
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSH+VGLAILGPLRELDEVA
Sbjct 112 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHEVGLAILGPLRELDEVA 171
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSA+DF REIEALRAHR + S
Sbjct 172 YLRFASVYRSFSSAEDFEREIEALRAHRQVPTSS 205
>gi|118618682|ref|YP_907014.1| transcriptional regulator NrdR [Mycobacterium ulcerans Agy99]
gi|189029236|sp|A0PT74.1|NRDR_MYCUA RecName: Full=Transcriptional repressor NrdR
gi|118570792|gb|ABL05543.1| membrane-associated regulatory protein [Mycobacterium ulcerans
Agy99]
Length=154
Score = 293 bits (749), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/154 (95%), Positives = 149/154 (97%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGV+EPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVSEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSH+VGLAILGPLRELDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSA+DF REIEALRAHR + S
Sbjct 121 YLRFASVYRSFSSAEDFEREIEALRAHRQVPTSS 154
>gi|296171813|ref|ZP_06852927.1| iron oxidase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295893949|gb|EFG73717.1| iron oxidase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=154
Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/152 (94%), Positives = 148/152 (98%), Gaps = 0/152 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVED+VRAAGSPE+PSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDTVRAAGSPEVPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSA 152
YLRFASVYRSF SADDF REI+ALR HR +SA
Sbjct 121 YLRFASVYRSFESADDFEREIQALREHRGVSA 152
>gi|240169680|ref|ZP_04748339.1| membrane-associated regulatory protein [Mycobacterium kansasii
ATCC 12478]
Length=154
Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/150 (95%), Positives = 147/150 (98%), Gaps = 0/150 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGV+EPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVSEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGR VDDDALNLLAQQVED+VRAAGSPE+PSHDVGLAILGPLRELDEVA
Sbjct 61 EKVISGVRRACQGRHVDDDALNLLAQQVEDTVRAAGSPEVPSHDVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNL 150
YLRFASVYRSFSSA+DF REIEALRAHR +
Sbjct 121 YLRFASVYRSFSSAEDFEREIEALRAHRKV 150
>gi|342858413|ref|ZP_08715068.1| NrdR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342134117|gb|EGT87297.1| NrdR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=154
Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/151 (94%), Positives = 147/151 (98%), Gaps = 0/151 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVED+VRAAGSPEIPSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDTVRAAGSPEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLS 151
YLRFASVYRSF SADDF REI+ALR HR ++
Sbjct 121 YLRFASVYRSFESADDFEREIQALRDHRGVA 151
>gi|41408932|ref|NP_961768.1| transcriptional regulator NrdR [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462512|ref|YP_882789.1| NrdR family transcriptional regulator [Mycobacterium avium 104]
gi|254776052|ref|ZP_05217568.1| transcriptional regulator NrdR [Mycobacterium avium subsp. avium
ATCC 25291]
gi|59799129|sp|Q73W26.1|NRDR_MYCPA RecName: Full=Transcriptional repressor NrdR
gi|189029229|sp|A0QIQ1.1|NRDR_MYCA1 RecName: Full=Transcriptional repressor NrdR
gi|41397291|gb|AAS05151.1| hypothetical protein MAP_2834c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118163799|gb|ABK64696.1| transcriptional regulator, NrdR family protein [Mycobacterium
avium 104]
gi|336458919|gb|EGO37875.1| transcriptional regulator NrdR [Mycobacterium avium subsp. paratuberculosis
S397]
Length=154
Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/151 (93%), Positives = 147/151 (98%), Gaps = 0/151 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVED+VRAAGSPE+PSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDTVRAAGSPEVPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLS 151
YLRFASVYRSF SADDF REI+ALR HR ++
Sbjct 121 YLRFASVYRSFESADDFEREIQALREHRGVA 151
>gi|120403433|ref|YP_953262.1| transcriptional regulator NrdR [Mycobacterium vanbaalenii PYR-1]
gi|189029237|sp|A1T7V6.1|NRDR_MYCVP RecName: Full=Transcriptional repressor NrdR
gi|119956251|gb|ABM13256.1| ATP-cone domain protein [Mycobacterium vanbaalenii PYR-1]
Length=154
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/154 (91%), Positives = 147/154 (96%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRR+CQGRQVDDDALNLLAQQVED+VRA GS E+PSH+VGLAILGPLRELDEVA
Sbjct 61 EKVIRGVRRSCQGRQVDDDALNLLAQQVEDAVRATGSAEVPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSA+DF REI+ALRAHR + A S
Sbjct 121 YLRFASVYRSFSSAEDFEREIQALRAHREVPAQS 154
>gi|145224535|ref|YP_001135213.1| transcriptional regulator NrdR [Mycobacterium gilvum PYR-GCK]
gi|315444866|ref|YP_004077745.1| transcriptional regulator NrdR [Mycobacterium sp. Spyr1]
gi|189029231|sp|A4TCN7.1|NRDR_MYCGI RecName: Full=Transcriptional repressor NrdR
gi|145217021|gb|ABP46425.1| ATP-cone domain protein [Mycobacterium gilvum PYR-GCK]
gi|315263169|gb|ADT99910.1| transcriptional regulator NrdR [Mycobacterium sp. Spyr1]
Length=154
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/154 (91%), Positives = 148/154 (97%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGRQVDDDALN LAQQVED+VRA GSPE+P+++VGLAILGPLR+LDEVA
Sbjct 61 EKVIRGVRRACQGRQVDDDALNKLAQQVEDAVRATGSPEVPANEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSFSSA+DF REIEALRAHR +SA S
Sbjct 121 YLRFASVYRSFSSAEDFEREIEALRAHREVSARS 154
>gi|108799137|ref|YP_639334.1| transcriptional regulator NrdR [Mycobacterium sp. MCS]
gi|119868252|ref|YP_938204.1| transcriptional regulator NrdR [Mycobacterium sp. KMS]
gi|126434745|ref|YP_001070436.1| transcriptional regulator NrdR [Mycobacterium sp. JLS]
6 more sequence titles
Length=154
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/151 (91%), Positives = 146/151 (97%), Gaps = 0/151 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGRQVDDDALNLLAQQVED+VRA GSPE+PSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVIKGVRRACQGRQVDDDALNLLAQQVEDAVRATGSPEVPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLS 151
YLRFASVYRSF SA DF REIEALRAH++++
Sbjct 121 YLRFASVYRSFESAADFEREIEALRAHQDVT 151
>gi|254821023|ref|ZP_05226024.1| transcriptional regulator NrdR [Mycobacterium intracellulare
ATCC 13950]
Length=154
Score = 283 bits (723), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/151 (91%), Positives = 145/151 (97%), Gaps = 0/151 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECG+RFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGKRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVISGVRRACQGRQVDDDALNLLAQQVED+VRA SPE+PSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDTVRAVASPEVPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLS 151
YLRFASVYRSF SADDF REI+ALR HR ++
Sbjct 121 YLRFASVYRSFESADDFEREIQALREHRGVA 151
>gi|169630119|ref|YP_001703768.1| transcriptional regulator NrdR [Mycobacterium abscessus ATCC
19977]
gi|226733009|sp|B1MCZ3.1|NRDR_MYCA9 RecName: Full=Transcriptional repressor NrdR
gi|169242086|emb|CAM63114.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=154
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/154 (89%), Positives = 145/154 (95%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV+ GVRRACQGR VDDDALNLLAQQVED+VRAAGSPEIPS++VGLAILGPLR+LDEVA
Sbjct 61 DKVVKGVRRACQGRDVDDDALNLLAQQVEDAVRAAGSPEIPSNEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYR FSSA+DF REI ALRAHR+ A S
Sbjct 121 YLRFASVYRGFSSAEDFEREIAALRAHRDAPAES 154
>gi|118468724|ref|YP_887076.1| NrdR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|189029232|sp|A0QVY8.1|NRDR_MYCS2 RecName: Full=Transcriptional repressor NrdR
gi|71360998|emb|CAJ19249.1| NrdR repressor protein [Mycobacterium smegmatis]
gi|118170011|gb|ABK70907.1| transcriptional regulator, NrdR family protein [Mycobacterium
smegmatis str. MC2 155]
Length=150
Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/149 (91%), Positives = 143/149 (96%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGV+EPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVSEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGR VDDDALN+LAQ+VED+VR G+PEIPSH+VGLAILGPLRELDEVA
Sbjct 61 EKVIRGVRRACQGRDVDDDALNVLAQKVEDAVRGLGTPEIPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSFSSA+DF REIEALRAHR
Sbjct 121 YLRFASVYRSFSSAEDFEREIEALRAHRG 149
>gi|226366185|ref|YP_002783968.1| hypothetical protein ROP_67760 [Rhodococcus opacus B4]
gi|119372221|sp|Q0S1M4.2|NRDR_RHOSR RecName: Full=Transcriptional repressor NrdR
gi|254768025|sp|C1B3A6.1|NRDR_RHOOB RecName: Full=Transcriptional repressor NrdR
gi|226244675|dbj|BAH55023.1| hypothetical protein [Rhodococcus opacus B4]
Length=154
Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/148 (90%), Positives = 143/148 (97%), Gaps = 0/148 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEGQAIRRRRSCPECGRRFTTVETAVL+VVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+DALNLLAQQVED+VRA+GS EIPS++VGLAILGPLR+LDEVA
Sbjct 61 EKVVRGVRRACQGRQVDNDALNLLAQQVEDAVRASGSAEIPSNEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHR 148
YLRFASVYRSFSSA+DFAREI+ LR HR
Sbjct 121 YLRFASVYRSFSSAEDFAREIKELREHR 148
>gi|312139401|ref|YP_004006737.1| ribonucleotide reductase regulator ndrr [Rhodococcus equi 103S]
gi|311888740|emb|CBH48052.1| ribonucleotide reductase regulator NdrR [Rhodococcus equi 103S]
Length=162
Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/149 (89%), Positives = 143/149 (96%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEG AIRRRRSCPECGRRF+TVETAVL+VVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSREADEGAAIRRRRSCPECGRRFSTVETAVLSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+DAL LLAQQVED+VRAAGSPEIPSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVVQGVRRACQGRQVDNDALYLLAQQVEDAVRAAGSPEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSFSSA+DF REI+ LRAHR+
Sbjct 121 YLRFASVYRSFSSAEDFEREIKDLRAHRD 149
>gi|325672715|ref|ZP_08152411.1| iron oxidase [Rhodococcus equi ATCC 33707]
gi|325556592|gb|EGD26258.1| iron oxidase [Rhodococcus equi ATCC 33707]
Length=188
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/149 (89%), Positives = 143/149 (96%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEG AIRRRRSCPECGRRF+TVETAVL+VVKRSGVTEPFSR
Sbjct 27 MHCPFCRHPDSRVVDSREADEGAAIRRRRSCPECGRRFSTVETAVLSVVKRSGVTEPFSR 86
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+DAL LLAQQVED+VRAAGSPEIPSH+VGLAILGPLR+LDEVA
Sbjct 87 EKVVQGVRRACQGRQVDNDALYLLAQQVEDAVRAAGSPEIPSHEVGLAILGPLRDLDEVA 146
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSFSSA+DF REI+ LRAHR+
Sbjct 147 YLRFASVYRSFSSAEDFEREIKDLRAHRD 175
>gi|111023748|ref|YP_706720.1| hypothetical protein RHA1_ro06790 [Rhodococcus jostii RHA1]
gi|110823278|gb|ABG98562.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=209
Score = 272 bits (695), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/148 (90%), Positives = 143/148 (97%), Gaps = 0/148 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEGQAIRRRRSCPECGRRFTTVETAVL+VVKRSGVTEPFSR
Sbjct 56 MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLSVVKRSGVTEPFSR 115
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+DALNLLAQQVED+VRA+GS EIPS++VGLAILGPLR+LDEVA
Sbjct 116 EKVVRGVRRACQGRQVDNDALNLLAQQVEDAVRASGSAEIPSNEVGLAILGPLRDLDEVA 175
Query 121 YLRFASVYRSFSSADDFAREIEALRAHR 148
YLRFASVYRSFSSA+DFAREI+ LR HR
Sbjct 176 YLRFASVYRSFSSAEDFAREIKELREHR 203
>gi|226306265|ref|YP_002766225.1| hypothetical protein RER_27780 [Rhodococcus erythropolis PR4]
gi|259512016|sp|C0ZYQ1.1|NRDR_RHOE4 RecName: Full=Transcriptional repressor NrdR
gi|226185382|dbj|BAH33486.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=165
Score = 263 bits (673), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/147 (86%), Positives = 137/147 (94%), Gaps = 0/147 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEGQAIRRRRSCPECGRRFTTVETAVL+VVKRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+D+LNLLAQQVED+VRA+GS EIPS++VGLAIL PLR LDEVA
Sbjct 61 EKVVKGVRRACQGRQVDNDSLNLLAQQVEDAVRASGSAEIPSNEVGLAILDPLRNLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAH 147
YLRFASVY+SFSSA DF REI +R H
Sbjct 121 YLRFASVYKSFSSAADFEREITDMREH 147
>gi|229490812|ref|ZP_04384647.1| transcriptional repressor NrdR [Rhodococcus erythropolis SK121]
gi|229322202|gb|EEN87988.1| transcriptional repressor NrdR [Rhodococcus erythropolis SK121]
Length=219
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/147 (86%), Positives = 137/147 (94%), Gaps = 0/147 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSRE DEGQAIRRRRSCPECGRRFTTVETAVL+VVKRSGVTEPFSR
Sbjct 55 MHCPFCRHPDSRVVDSREADEGQAIRRRRSCPECGRRFTTVETAVLSVVKRSGVTEPFSR 114
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGRQVD+D+LNLLAQQVED+VRA+GS EIPS++VGLAIL PLR LDEVA
Sbjct 115 EKVVKGVRRACQGRQVDNDSLNLLAQQVEDAVRASGSAEIPSNEVGLAILDPLRNLDEVA 174
Query 121 YLRFASVYRSFSSADDFAREIEALRAH 147
YLRFASVY+SFSSA DF REI +R H
Sbjct 175 YLRFASVYKSFSSAADFEREITDMREH 201
>gi|15827481|ref|NP_301744.1| transcriptional regulator NrdR [Mycobacterium leprae TN]
gi|221229958|ref|YP_002503374.1| transcriptional regulator NrdR [Mycobacterium leprae Br4923]
gi|18202554|sp|Q49844.1|NRDR_MYCLE RecName: Full=Transcriptional repressor NrdR
gi|254768022|sp|B8ZQU7.1|NRDR_MYCLB RecName: Full=Transcriptional repressor NrdR
gi|467092|gb|AAA17275.1| u2235a [Mycobacterium leprae]
gi|13093031|emb|CAC31386.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933065|emb|CAR71100.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=154
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/152 (93%), Positives = 145/152 (96%), Gaps = 0/152 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRH DSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAV+AVVKRSGVTEPFSR
Sbjct 1 MHCPFCRHSDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVVAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KVI GVRRACQGRQVDDDALNLLAQQVED+VRAAG PE+PSH+VGLAILGPLRELDEVA
Sbjct 61 GKVIRGVRRACQGRQVDDDALNLLAQQVEDTVRAAGLPEVPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSA 152
YLRFASVYRSFSSADDF REIEALRAHR +S
Sbjct 121 YLRFASVYRSFSSADDFEREIEALRAHRRVST 152
>gi|54025768|ref|YP_120010.1| transcriptional regulator NrdR [Nocardia farcinica IFM 10152]
gi|59799083|sp|Q5YT45.1|NRDR_NOCFA RecName: Full=Transcriptional repressor NrdR
gi|54017276|dbj|BAD58646.1| putative ATP-binding protein [Nocardia farcinica IFM 10152]
Length=156
Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/144 (86%), Positives = 136/144 (95%), Gaps = 0/144 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCP+CRHPDSRV+DSRE +EG AIRRRRSCP CGRRFTTVETA+L+VVKRSGVTEPFSR
Sbjct 1 MHCPYCRHPDSRVVDSREAEEGAAIRRRRSCPNCGRRFTTVETAILSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGR+VDDDALNLLAQQVED+VRA GSPE+PSH+VGLAILGPLR+LDEVA
Sbjct 61 EKVIRGVRRACQGREVDDDALNLLAQQVEDAVRAKGSPEVPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEAL 144
YLRFASVYRSF+SA+DF REI +
Sbjct 121 YLRFASVYRSFTSAEDFEREISEM 144
>gi|333919396|ref|YP_004492977.1| transcriptional repressor NrdR [Amycolicicoccus subflavus DQS3-9A1]
gi|333481617|gb|AEF40177.1| Transcriptional repressor NrdR [Amycolicicoccus subflavus DQS3-9A1]
Length=249
Score = 254 bits (648), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/149 (83%), Positives = 135/149 (91%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFC+ SRV+DSRE DEGQAIRRRRSC ECGRRFTTVETAVLAV+KRSGVTEPFSR
Sbjct 94 MRCPFCKSASSRVVDSREADEGQAIRRRRSCTECGRRFTTVETAVLAVLKRSGVTEPFSR 153
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVR ACQGRQVDDDALN LAQQVED+VRA+G+ E+PSH++GLAILGPLR+LDEVA
Sbjct 154 EKVVRGVRSACQGRQVDDDALNKLAQQVEDTVRASGAAEVPSHEIGLAILGPLRDLDEVA 213
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSFSSADDF +EIE LR HR
Sbjct 214 YLRFASVYRSFSSADDFEKEIEDLREHRE 242
>gi|159037048|ref|YP_001536301.1| transcriptional regulator NrdR [Salinispora arenicola CNS-205]
gi|189029308|sp|A8M7X6.1|NRDR_SALAI RecName: Full=Transcriptional repressor NrdR
gi|157915883|gb|ABV97310.1| ATP-cone domain protein [Salinispora arenicola CNS-205]
Length=154
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/145 (80%), Positives = 130/145 (90%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRHPDSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHPDSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VDDD++ LLAQ+VE++VRA G+ E+PSH+VGLAILGPLR+LDEVA
Sbjct 61 TKIIGGVRKACQGRPVDDDSIALLAQKVEETVRAKGAAELPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSF S DF REIE LR
Sbjct 121 YLRFASVYRSFESLADFEREIETLR 145
>gi|145593999|ref|YP_001158296.1| transcriptional regulator NrdR [Salinispora tropica CNB-440]
gi|189029309|sp|A4X4W8.1|NRDR_SALTO RecName: Full=Transcriptional repressor NrdR
gi|145303336|gb|ABP53918.1| ATP-cone domain protein [Salinispora tropica CNB-440]
Length=154
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/145 (79%), Positives = 130/145 (90%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRHPDSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE A+LAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHPDSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAILAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VDDD++ LLAQ+VE++VRA G+ E+PSH+VGLAILGPLR+LDEVA
Sbjct 61 TKIIGGVRKACQGRPVDDDSVALLAQKVEETVRAKGAAELPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSF S DF REIE LR
Sbjct 121 YLRFASVYRSFESLADFEREIETLR 145
>gi|302866052|ref|YP_003834689.1| ATP-cone domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302568911|gb|ADL45113.1| ATP-cone domain protein [Micromonospora aurantiaca ATCC 27029]
Length=166
Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/144 (79%), Positives = 128/144 (89%), Gaps = 0/144 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRH DSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHADSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VDDD++ LLAQ+VE++VRA G+ EIPSH+VGLAILGPLR+LDEVA
Sbjct 61 TKIIGGVRKACQGRPVDDDSIALLAQKVEETVRAKGAAEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEAL 144
Y+RFASVYRSF S DF REIE L
Sbjct 121 YMRFASVYRSFDSLADFEREIETL 144
>gi|291302020|ref|YP_003513298.1| ATP-cone domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290571240|gb|ADD44205.1| ATP-cone domain protein [Stackebrandtia nassauensis DSM 44728]
Length=156
Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/154 (75%), Positives = 132/154 (86%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+C+HPDSRV+DSRE ++G IRRRRSC ECG+RFTTVE ++LAVVKRSGVTEPFSR
Sbjct 1 MRCPYCKHPDSRVVDSREAEDGLLIRRRRSCQECGKRFTTVEESILAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KV SGVR+ACQGR VDDDAL +LA++VED +RA G EIPS++VGLAILGPLRELDEVA
Sbjct 61 TKVASGVRKACQGRPVDDDALAVLAKRVEDEIRAKGMAEIPSNEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSF S +DFA EIEALR +R A +
Sbjct 121 YLRFASVYRSFESVEDFAAEIEALRDNRETGAEA 154
>gi|258654102|ref|YP_003203258.1| ATP-cone domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258557327|gb|ACV80269.1| ATP-cone domain protein [Nakamurella multipartita DSM 44233]
Length=178
Score = 236 bits (603), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/147 (78%), Positives = 130/147 (89%), Gaps = 0/147 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCRHPDSRVIDSRE D+GQAIRRRRSCPECGRRF+T+E A+L+VVKRSGVTEPFSR
Sbjct 1 MRCPFCRHPDSRVIDSREVDDGQAIRRRRSCPECGRRFSTLEGALLSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KVI+GV RACQGR VD DA+ LAQ+VE++VR +G E+PS DVGLAILGPLR+LDEVA
Sbjct 61 SKVIAGVTRACQGRPVDPDAIAQLAQRVEETVRGSGQAELPSQDVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAH 147
YLRFASVYRSF+SADDFA EI ++R
Sbjct 121 YLRFASVYRSFTSADDFAAEIRSMREQ 147
>gi|302525527|ref|ZP_07277869.1| transcriptional regulator NrdR [Streptomyces sp. AA4]
gi|302434422|gb|EFL06238.1| transcriptional regulator NrdR [Streptomyces sp. AA4]
Length=163
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/145 (80%), Positives = 127/145 (88%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCRH DSRV+DSRE DEGQAIRRRRSC ECGRRFTT ET VLAVVKRSG TE FSR
Sbjct 1 MRCPFCRHADSRVVDSREVDEGQAIRRRRSCAECGRRFTTSETMVLAVVKRSGATEQFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV++GVRRACQGR VDDDAL LAQ+VE+S+R+AG EIPSH+VGLAILGPLRELD VA
Sbjct 61 DKVVNGVRRACQGRPVDDDALQKLAQRVEESIRSAGLAEIPSHEVGLAILGPLRELDGVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSFSS +DF +EI LR
Sbjct 121 YLRFASVYRSFSSVEDFEKEISDLR 145
>gi|257056734|ref|YP_003134566.1| transcriptional regulator NrdR [Saccharomonospora viridis DSM
43017]
gi|256586606|gb|ACU97739.1| transcriptional regulator NrdR [Saccharomonospora viridis DSM
43017]
Length=161
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/145 (81%), Positives = 125/145 (87%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCRH DSRV+DSRE DEGQAIRRRRSC CGRRFTT ET VLAVVKRSGVTE FSR
Sbjct 1 MRCPFCRHADSRVVDSREVDEGQAIRRRRSCSACGRRFTTSETMVLAVVKRSGVTEQFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV+ GVRRACQGR VDDDAL LAQQVE+S+RA G EIPSH+VGLAILGPLRELD VA
Sbjct 61 DKVVRGVRRACQGRPVDDDALQKLAQQVEESIRATGVAEIPSHEVGLAILGPLRELDAVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSFSS +DF EI+ LR
Sbjct 121 YLRFASVYRSFSSIEDFEAEIKNLR 145
>gi|238063473|ref|ZP_04608182.1| nrdR family transcriptional repressor [Micromonospora sp. ATCC
39149]
gi|237885284|gb|EEP74112.1| nrdR family transcriptional repressor [Micromonospora sp. ATCC
39149]
Length=170
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/144 (79%), Positives = 128/144 (89%), Gaps = 0/144 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRH DSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHADSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VD+D++ LLAQ+VE+++RA G+ EIPSHDVGLAILGPLR+LDEVA
Sbjct 61 IKIIGGVRKACQGRPVDEDSIALLAQKVEETIRAKGAAEIPSHDVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEAL 144
YLRFASVYRSF S DF REIE L
Sbjct 121 YLRFASVYRSFDSLADFEREIETL 144
>gi|300784300|ref|YP_003764591.1| NrdR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299793814|gb|ADJ44189.1| transcriptional regulator NrdR [Amycolatopsis mediterranei U32]
Length=164
Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/145 (81%), Positives = 127/145 (88%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCRH DSRV+DSRE DEGQAIRRRRSC CGRRFTT ET VLAVVKRSGVTE FSR
Sbjct 1 MRCPFCRHADSRVVDSREVDEGQAIRRRRSCASCGRRFTTSETMVLAVVKRSGVTEQFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV+SGVRRACQGR VDDDAL LAQ+VE+S+R+AG EIPSH+VGLAILGPLRELD VA
Sbjct 61 DKVVSGVRRACQGRPVDDDALQQLAQRVEESIRSAGLAEIPSHEVGLAILGPLRELDGVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSFSS +DF +EI LR
Sbjct 121 YLRFASVYRSFSSVEDFEKEIADLR 145
>gi|330466450|ref|YP_004404193.1| transcriptional regulator NrdR [Verrucosispora maris AB-18-032]
gi|328809421|gb|AEB43593.1| transcriptional regulator NrdR [Verrucosispora maris AB-18-032]
Length=166
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/144 (78%), Positives = 128/144 (89%), Gaps = 0/144 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRH DSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHADSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VD+D++ LLAQ+VE+++RA G+ EIPSH+VGLAILGPLR+LDEVA
Sbjct 61 TKIIGGVRKACQGRPVDEDSIALLAQRVEETIRAKGAAEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEAL 144
YLRFASVYRSF S DF REIE L
Sbjct 121 YLRFASVYRSFDSLADFEREIETL 144
>gi|315502611|ref|YP_004081498.1| ATP-cone domain-containing protein [Micromonospora sp. L5]
gi|315409230|gb|ADU07347.1| ATP-cone domain protein [Micromonospora sp. L5]
Length=166
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/142 (79%), Positives = 127/142 (90%), Gaps = 0/142 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CP+CRH DSRV+DSRE D+GQ IRRRRSCPECG+RFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPYCRHADSRVVDSREADDGQLIRRRRSCPECGKRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
K+I GVR+ACQGR VDDD++ LLAQ+VE++VRA G+ EIPSH+VGLAILGPLR+LDEVA
Sbjct 61 TKIIGGVRKACQGRPVDDDSIALLAQKVEETVRAKGAAEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIE 142
Y+RFASVYRSF S DF REIE
Sbjct 121 YMRFASVYRSFDSLADFEREIE 142
>gi|262202157|ref|YP_003273365.1| ATP-cone domain-containing protein [Gordonia bronchialis DSM
43247]
gi|262085504|gb|ACY21472.1| ATP-cone domain protein [Gordonia bronchialis DSM 43247]
Length=170
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/153 (76%), Positives = 132/153 (87%), Gaps = 0/153 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFC++ D++VIDSR DEGQAIRRRR+C ECGRRF+TVE+AVLAVVKR+GVTEPFSR
Sbjct 1 MRCPFCKNEDTKVIDSRVADEGQAIRRRRACAECGRRFSTVESAVLAVVKRNGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGR+V DD L LAQQVED+VRA+GS EIPS++VGLAILGPLR+LDEVA
Sbjct 61 EKVMRGVRRACQGREVGDDDLAQLAQQVEDAVRASGSAEIPSNEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAH 153
YLRFASVYRSF S DDF REI+ L+ SA
Sbjct 121 YLRFASVYRSFDSLDDFQREIDDLQGRTADSAQ 153
>gi|317506474|ref|ZP_07964275.1| transcriptional regulator NrdR [Segniliparus rugosus ATCC BAA-974]
gi|316255235|gb|EFV14504.1| transcriptional regulator NrdR [Segniliparus rugosus ATCC BAA-974]
Length=153
Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/149 (74%), Positives = 129/149 (87%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFC+HPD+RV+DSR DEG++IRRRRSCP+CGRRFTTVE+AVL VVKR+G+ EPFS
Sbjct 1 MHCPFCKHPDTRVMDSRVADEGRSIRRRRSCPDCGRRFTTVESAVLTVVKRNGIAEPFSH 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGR VDDDAL LA+ VED+VR+ G+ E+PSH++GLAILGPLR+LDEVA
Sbjct 61 EKVIKGVRRACQGRDVDDDALLKLARDVEDAVRSGGAAEVPSHEIGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSF SA DF I+ LR H+
Sbjct 121 YLRFASVYRSFDSATDFEAAIKELREHQK 149
>gi|343926989|ref|ZP_08766477.1| transcriptional repressor NrdR [Gordonia alkanivorans NBRC 16433]
gi|343763047|dbj|GAA13403.1| transcriptional repressor NrdR [Gordonia alkanivorans NBRC 16433]
Length=182
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/154 (76%), Positives = 132/154 (86%), Gaps = 0/154 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFC++ D++VIDSR DEGQAIRRRRSC ECGRRF+TVE+AVLAVVKR+GVTEPFSR
Sbjct 28 MRCPFCKNDDTKVIDSRVADEGQAIRRRRSCVECGRRFSTVESAVLAVVKRNGVTEPFSR 87
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GVRRACQGR V +DAL LAQQVED+VRA+GS EIPS++VGLAIL PLR+LDEVA
Sbjct 88 EKVMRGVRRACQGRHVAEDALAQLAQQVEDTVRASGSAEIPSNEVGLAILKPLRDLDEVA 147
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNLSAHS 154
YLRFASVYRSF S +DF REI+ LRA S S
Sbjct 148 YLRFASVYRSFDSVEDFQREIDDLRAASAESVKS 181
>gi|296393373|ref|YP_003658257.1| ATP-cone domain-containing protein [Segniliparus rotundus DSM
44985]
gi|296180520|gb|ADG97426.1| ATP-cone domain protein [Segniliparus rotundus DSM 44985]
Length=162
Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/149 (74%), Positives = 128/149 (86%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFC+HPD+RV+DSR DEG++IRRRRSCP+CGRRFTTVE+AVL VVKR+G+ EPFS
Sbjct 10 MHCPFCKHPDTRVMDSRLADEGRSIRRRRSCPDCGRRFTTVESAVLTVVKRNGIAEPFSH 69
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI GVRRACQGR VD+DAL LA VED+VR+ G+ E+PSH++GLAILGPLR+LDEVA
Sbjct 70 EKVIRGVRRACQGRDVDEDALLKLASDVEDTVRSGGAAEVPSHEIGLAILGPLRDLDEVA 129
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYRSF SA DF I+ L AH+
Sbjct 130 YLRFASVYRSFESAADFEAAIKELHAHQK 158
>gi|256375569|ref|YP_003099229.1| ATP-cone domain-containing protein [Actinosynnema mirum DSM 43827]
gi|255919872|gb|ACU35383.1| ATP-cone domain protein [Actinosynnema mirum DSM 43827]
Length=151
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/146 (77%), Positives = 126/146 (87%), Gaps = 0/146 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCR+ +SRV+DSRE DEGQ IRRRRSC CGRRFTTVE AVLAVVKRSGVTEPFSR
Sbjct 1 MRCPFCRNSESRVVDSREVDEGQVIRRRRSCTTCGRRFTTVEEAVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV++GVRRACQGR VDDDA LA +VE+S+R+ G EIPSH+VGLAILGPLR+LDEVA
Sbjct 61 DKVVNGVRRACQGRPVDDDAFQHLAHRVEESIRSTGVAEIPSHEVGLAILGPLRDLDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRA 146
YLRFASVYRSFSS +DF +EI LR
Sbjct 121 YLRFASVYRSFSSVEDFEKEIADLRG 146
>gi|331695963|ref|YP_004332202.1| transcriptional repressor nrdR [Pseudonocardia dioxanivorans
CB1190]
gi|326950652|gb|AEA24349.1| Transcriptional repressor nrdR [Pseudonocardia dioxanivorans
CB1190]
Length=159
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/145 (78%), Positives = 125/145 (87%), Gaps = 0/145 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCRH D RVIDSRE ++GQA RRRRSC CGRRFTTVE VLAVVKRSGVTEPFSR
Sbjct 1 MRCPFCRHSDCRVIDSREVEDGQATRRRRSCASCGRRFTTVEEPVLAVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KV+ GVRRACQGR VD+DAL LA +VE++VRA G+ EIPSH+VGLAILGPLRELDEVA
Sbjct 61 DKVVGGVRRACQGRPVDEDALQQLAHRVEEAVRAGGTAEIPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR 145
YLRFASVYRSFSS +DF +EI LR
Sbjct 121 YLRFASVYRSFSSIEDFEKEIADLR 145
>gi|117928684|ref|YP_873235.1| ribonucleotide reductase regulator NrdR-like [Acidothermus cellulolyticus
11B]
gi|189030494|sp|A0LUY9.1|NRDR_ACIC1 RecName: Full=Transcriptional repressor NrdR
gi|117649147|gb|ABK53249.1| Ribonucleotide reductase regulator NrdR-like protein [Acidothermus
cellulolyticus 11B]
Length=170
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/150 (74%), Positives = 126/150 (84%), Gaps = 0/150 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M+CPFCRHPDSRV+DSR TD+G AIRRRRSCPECGRRFTTVETA L+V+KRSGV EPFSR
Sbjct 1 MYCPFCRHPDSRVVDSRVTDDGTAIRRRRSCPECGRRFTTVETAALSVIKRSGVIEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KVI+GVR+ACQGR V +DAL LLAQ+VED +RA G E+ S +VGLA+LGPLRELD+VA
Sbjct 61 AKVIAGVRKACQGRPVSEDALALLAQRVEDELRATGCSEVTSQEVGLAVLGPLRELDDVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNL 150
YLRFASVYR F S +DF EI RA R L
Sbjct 121 YLRFASVYRGFESLEDFEAEIALQRAERAL 150
>gi|269125829|ref|YP_003299199.1| ATP-cone domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268310787|gb|ACY97161.1| ATP-cone domain protein [Thermomonospora curvata DSM 43183]
Length=157
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/146 (74%), Positives = 125/146 (86%), Gaps = 0/146 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCR+PDSRVIDSR ++G AIRRRRSCP+CG+RFTT ET + V KRSGVTEPFSR
Sbjct 1 MHCPFCRNPDSRVIDSRSVEDGTAIRRRRSCPQCGKRFTTQETVLQMVAKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EK+I+GVRRACQGR V +DAL L QVE+++RA G EIPSH++GLAILGPLRELDEVA
Sbjct 61 EKIIAGVRRACQGRPVSEDALARLGHQVEEAIRATGLAEIPSHEIGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRA 146
YLRFASVYR F S +DF REI++LRA
Sbjct 121 YLRFASVYRGFESLEDFEREIQSLRA 146
>gi|284992285|ref|YP_003410839.1| ATPase domain-containing protein [Geodermatophilus obscurus DSM
43160]
gi|284065530|gb|ADB76468.1| ATP-cone domain protein [Geodermatophilus obscurus DSM 43160]
Length=183
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/146 (76%), Positives = 126/146 (87%), Gaps = 0/146 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFC +PDSRVIDSRE DEG RRRRSCP CGRRFTTVE AVLAVVKRSGV+EPF+R
Sbjct 1 MRCPFCHNPDSRVIDSREADEGATTRRRRSCPACGRRFTTVEEAVLAVVKRSGVSEPFNR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KV++GVRRACQGR VD+D L LAQQVED++RA G+ E+PS++VGLAIL PLRELDEVA
Sbjct 61 SKVVAGVRRACQGRPVDEDQLQKLAQQVEDAIRATGAAEVPSNEVGLAILRPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRA 146
YLRFASVYR+F+S +DF +EI LRA
Sbjct 121 YLRFASVYRAFTSLEDFEKEITELRA 146
>gi|271968372|ref|YP_003342568.1| ATP-cone domain-containing protein [Streptosporangium roseum
DSM 43021]
gi|270511547|gb|ACZ89825.1| ATP-cone domain protein [Streptosporangium roseum DSM 43021]
Length=153
Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/150 (73%), Positives = 128/150 (86%), Gaps = 0/150 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPD+RVIDSR T++G AIRRRR+CPECGRRFTT ET +L V KRSGVTEPF R
Sbjct 1 MHCPFCRHPDTRVIDSRSTEDGGAIRRRRTCPECGRRFTTQETVLLMVSKRSGVTEPFFR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KVI+GVRRACQGR V +D+L L Q+VE+S+RA G+ EI +H+VGLAILGPLRELDEVA
Sbjct 61 DKVIAGVRRACQGRPVSEDSLAQLGQRVEESIRATGAAEIAAHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRNL 150
YLRFASVYRSF + DF EI+ LRA R++
Sbjct 121 YLRFASVYRSFETLADFETEIKQLRAERSV 150
>gi|296270390|ref|YP_003653022.1| ATP-cone domain-containing protein [Thermobispora bispora DSM
43833]
gi|296093177|gb|ADG89129.1| ATP-cone domain protein [Thermobispora bispora DSM 43833]
Length=154
Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/144 (76%), Positives = 123/144 (86%), Gaps = 0/144 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPD+RVIDSR T++G AIRRRR+CPEC RRFTT ET +L V KRSGVTEPFSR
Sbjct 1 MHCPFCRHPDTRVIDSRTTEDGAAIRRRRTCPECNRRFTTQETVLLMVSKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKVI+GVRRACQGR V +DAL +L Q+VE+S+RA G EI SHDVGLAILGPLRELDEVA
Sbjct 61 EKVIAGVRRACQGRPVSEDALAMLGQKVEESIRAKGVAEIASHDVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEAL 144
YLRFASVYR F + +DF EI+ L
Sbjct 121 YLRFASVYRGFETLEDFEAEIKRL 144
>gi|254391043|ref|ZP_05006251.1| transcriptional repressor nrdR [Streptomyces clavuligerus ATCC
27064]
gi|294815513|ref|ZP_06774156.1| Transcriptional repressor nrdR [Streptomyces clavuligerus ATCC
27064]
gi|326443864|ref|ZP_08218598.1| transcriptional regulator NrdR [Streptomyces clavuligerus ATCC
27064]
gi|18202232|sp|O86848.1|NRDR_STRCL RecName: Full=Transcriptional repressor NrdR
gi|3402270|emb|CAA12170.1| NrdR regulatory protein [Streptomyces clavuligerus]
gi|197704738|gb|EDY50550.1| transcriptional repressor nrdR [Streptomyces clavuligerus ATCC
27064]
gi|294328112|gb|EFG09755.1| Transcriptional repressor nrdR [Streptomyces clavuligerus ATCC
27064]
Length=172
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/148 (74%), Positives = 124/148 (84%), Gaps = 0/148 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSR TD+G +IRRRR CP+C RRFTTVETA L V+KRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRTTDDGTSIRRRRQCPDCSRRFTTVETASLMVIKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
KVISGVR+ACQGR V +DAL L Q+VE++VRA GS E+ +HDVGLAILGPL+ELD VA
Sbjct 61 TKVISGVRKACQGRPVTEDALAQLGQRVEEAVRATGSAELTTHDVGLAILGPLQELDLVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHR 148
YLRFASVYR+F S +DF I LR HR
Sbjct 121 YLRFASVYRAFDSLEDFEAAIAELREHR 148
>gi|229820917|ref|YP_002882443.1| ATP-cone domain-containing protein [Beutenbergia cavernae DSM
12333]
gi|259512000|sp|C5BWL5.1|NRDR_BEUC1 RecName: Full=Transcriptional repressor NrdR
gi|229566830|gb|ACQ80681.1| ATP-cone domain protein [Beutenbergia cavernae DSM 12333]
Length=170
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/149 (72%), Positives = 128/149 (86%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSR +++G +IRRRR CPECGRRFTTVET L+VVKRSGV +PFSR
Sbjct 1 MHCPFCRHPDSRVVDSRTSEDGSSIRRRRQCPECGRRFTTVETTSLSVVKRSGVAQPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV++GVR+ACQGR V +D L LLA++VE+++RA G+ E+ +H+VGL+ILGPLRELDEVA
Sbjct 61 EKVVAGVRKACQGRPVSEDDLALLARRVEETIRATGAAEVDAHEVGLSILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYR FSS +DF I ALRA R
Sbjct 121 YLRFASVYRGFSSLEDFEAAITALRAERE 149
>gi|134098344|ref|YP_001104005.1| ribonucleotide reductase regulator NrdR-like protein [Saccharopolyspora
erythraea NRRL 2338]
gi|189029307|sp|A4FAK5.1|NRDR_SACEN RecName: Full=Transcriptional repressor NrdR
gi|133910967|emb|CAM01080.1| ribonucleotide reductase regulator NrdR-like protein [Saccharopolyspora
erythraea NRRL 2338]
Length=189
Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/149 (74%), Positives = 126/149 (85%), Gaps = 0/149 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
M CPFCR DSRV+DSRE ++GQAIRRRRSC CGRRFTT+E VL+VVKRSGVTEPFSR
Sbjct 1 MRCPFCRGDDSRVVDSREVEDGQAIRRRRSCSGCGRRFTTIEELVLSVVKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
EKV+ GV RACQGR V++DAL LA QVED+VR+ G E+PSH+VGLAILGPLRELDEVA
Sbjct 61 EKVVRGVARACQGRPVEEDALQQLAHQVEDTVRSLGVSELPSHEVGLAILGPLRELDEVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALRAHRN 149
YLRFASVYR+FSS +DF +EI LR+ R
Sbjct 121 YLRFASVYRAFSSVEDFEKEIADLRSLRG 149
>gi|256832288|ref|YP_003161015.1| ATP-cone domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685819|gb|ACV08712.1| ATP-cone domain protein [Jonesia denitrificans DSM 20603]
Length=153
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 130/150 (87%), Gaps = 1/150 (0%)
Query 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSR 60
MHCPFCRHPDSRV+DSR +D+G IRRRR CP+C +RFTT+ETA L+V KRSGVTEPFSR
Sbjct 1 MHCPFCRHPDSRVVDSRTSDDGATIRRRRQCPQCQKRFTTIETASLSVTKRSGVTEPFSR 60
Query 61 EKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVA 120
+KVI+GVR+ACQGR V+DD L LAQ VE+++RA GS E+ ++DVGLAILGPLRELD+VA
Sbjct 61 QKVINGVRKACQGRPVNDDDLAKLAQTVEETIRAQGSAEVGANDVGLAILGPLRELDQVA 120
Query 121 YLRFASVYRSFSSADDFAREIEALR-AHRN 149
YLRFASVY++F S DDFA+ +E LR +H++
Sbjct 121 YLRFASVYQNFDSLDDFAQAVEDLRHSHKD 150
Lambda K H
0.321 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131222683000
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40