BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2720
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
gi|308377110|ref|ZP_07441152.2| repressor lexA [Mycobacterium tu... 470 8e-131
gi|167970057|ref|ZP_02552334.1| LexA repressor [Mycobacterium tu... 469 2e-130
gi|327478517|sp|Q7TY15.2|LEXA_MYCBO RecName: Full=LexA repressor... 468 4e-130
gi|15842258|ref|NP_337295.1| LexA repressor [Mycobacterium tuber... 431 5e-119
gi|289553495|ref|ZP_06442705.1| repressor lexA [Mycobacterium tu... 430 8e-119
gi|254821025|ref|ZP_05226026.1| LexA repressor [Mycobacterium in... 430 9e-119
gi|31793892|ref|NP_856385.1| LexA repressor [Mycobacterium bovis... 429 1e-118
gi|296171811|ref|ZP_06852925.1| SOS regulatory protein LexA [Myc... 422 1e-116
gi|118618684|ref|YP_907016.1| LexA repressor [Mycobacterium ulce... 416 2e-114
gi|183982006|ref|YP_001850297.1| repressor LexA [Mycobacterium m... 415 3e-114
gi|342858411|ref|ZP_08715066.1| LexA repressor [Mycobacterium co... 409 1e-112
gi|240171202|ref|ZP_04749861.1| LexA repressor [Mycobacterium ka... 403 1e-110
gi|118463995|ref|YP_882791.1| LexA repressor [Mycobacterium aviu... 402 2e-110
gi|336458917|gb|EGO37873.1| SOS regulatory protein LexA [Mycobac... 402 3e-110
gi|327478520|sp|P61612.2|LEXA_MYCPA RecName: Full=LexA repressor 399 1e-109
gi|15827479|ref|NP_301742.1| LexA repressor [Mycobacterium lepra... 392 2e-107
gi|120403431|ref|YP_953260.1| LexA repressor [Mycobacterium vanb... 392 3e-107
gi|145224537|ref|YP_001135215.1| LexA repressor [Mycobacterium g... 389 2e-106
gi|108799135|ref|YP_639332.1| LexA repressor [Mycobacterium sp. ... 389 2e-106
gi|41408934|ref|NP_961770.1| LexA repressor [Mycobacterium avium... 385 2e-105
gi|333991099|ref|YP_004523713.1| repressor LexA [Mycobacterium s... 380 7e-104
gi|169630121|ref|YP_001703770.1| LexA repressor [Mycobacterium a... 374 8e-102
gi|118468004|ref|YP_887073.1| LexA repressor [Mycobacterium smeg... 374 9e-102
gi|226306263|ref|YP_002766223.1| LexA repressor [Rhodococcus ery... 352 2e-95
gi|229490829|ref|ZP_04384664.1| repressor LexA [Rhodococcus eryt... 352 2e-95
gi|226366183|ref|YP_002783966.1| LexA repressor [Rhodococcus opa... 347 1e-93
gi|111023746|ref|YP_706718.1| LexA repressor [Rhodococcus jostii... 346 1e-93
gi|312139399|ref|YP_004006735.1| lexa repressor [Rhodococcus equ... 346 1e-93
gi|54025770|ref|YP_120012.1| LexA repressor [Nocardia farcinica ... 342 3e-92
gi|326384481|ref|ZP_08206161.1| LexA repressor [Gordonia neofeli... 335 3e-90
gi|296139522|ref|YP_003646765.1| transcriptional repressor, LexA... 335 4e-90
gi|262202154|ref|YP_003273362.1| LexA repressor [Gordonia bronch... 332 3e-89
gi|343926991|ref|ZP_08766479.1| LexA repressor [Gordonia alkaniv... 330 8e-89
gi|284992288|ref|YP_003410842.1| LexA family transcriptional reg... 319 2e-85
gi|258654104|ref|YP_003203260.1| SOS-response transcriptional re... 313 1e-83
gi|302554607|ref|ZP_07306949.1| LexA repressor [Streptomyces vir... 313 1e-83
gi|302557999|ref|ZP_07310341.1| LexA repressor [Streptomyces gri... 313 2e-83
gi|294631831|ref|ZP_06710391.1| LexA repressor [Streptomyces sp.... 312 2e-83
gi|290956952|ref|YP_003488134.1| SOS repressor LexA [Streptomyce... 312 2e-83
gi|289768659|ref|ZP_06528037.1| LexA repressor [Streptomyces liv... 312 2e-83
gi|21224148|ref|NP_629927.1| LexA repressor [Streptomyces coelic... 311 4e-83
gi|291436850|ref|ZP_06576240.1| LexA repressor [Streptomyces gha... 310 1e-82
gi|297202845|ref|ZP_06920242.1| LexA repressor [Streptomyces svi... 310 1e-82
gi|328885526|emb|CCA58765.1| SOS-response repressor and protease... 310 1e-82
gi|294815512|ref|ZP_06774155.1| LexA repressor [Streptomyces cla... 310 2e-82
gi|297156722|gb|ADI06434.1| LexA repressor [Streptomyces bingche... 309 3e-82
gi|29829005|ref|NP_823639.1| LexA repressor [Streptomyces avermi... 309 3e-82
gi|300784298|ref|YP_003764589.1| LexA family transcriptional reg... 309 3e-82
gi|329939980|ref|ZP_08289262.1| SOS-response repressor and prote... 308 3e-82
gi|345009787|ref|YP_004812141.1| SOS-response transcriptional re... 308 3e-82
>gi|308377110|ref|ZP_07441152.2| repressor lexA [Mycobacterium tuberculosis SUMu008]
gi|308348968|gb|EFP37819.1| repressor lexA [Mycobacterium tuberculosis SUMu008]
Length=248
Score = 470 bits (1209), Expect = 8e-131, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL
Sbjct 13 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 72
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL
Sbjct 73 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 132
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA
Sbjct 133 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 192
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 193 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 248
>gi|167970057|ref|ZP_02552334.1| LexA repressor [Mycobacterium tuberculosis H37Ra]
gi|253798198|ref|YP_003031199.1| repressor lexA [Mycobacterium tuberculosis KZN 1435]
gi|254232822|ref|ZP_04926149.1| repressor lexA [Mycobacterium tuberculosis C]
37 more sequence titles
Length=236
Score = 469 bits (1207), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 236/236 (100%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL
Sbjct 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA
Sbjct 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
>gi|327478517|sp|Q7TY15.2|LEXA_MYCBO RecName: Full=LexA repressor
gi|327478518|sp|A1KM58.2|LEXA_MYCBP RecName: Full=LexA repressor
gi|327478519|sp|C1AFH9.2|LEXA_MYCBT RecName: Full=LexA repressor
Length=236
Score = 468 bits (1203), Expect = 4e-130, Method: Compositional matrix adjust.
Identities = 235/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTF PVL
Sbjct 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFAPVL 120
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA
Sbjct 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
>gi|15842258|ref|NP_337295.1| LexA repressor [Mycobacterium tuberculosis CDC1551]
gi|148662561|ref|YP_001284084.1| LexA repressor [Mycobacterium tuberculosis H37Ra]
gi|148823909|ref|YP_001288663.1| LexA repressor [Mycobacterium tuberculosis F11]
30 more sequence titles
Length=217
Score = 431 bits (1108), Expect = 5e-119, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 20 VLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL 79
+LSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL
Sbjct 1 MLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL 60
Query 80 RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVF 139
RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVF
Sbjct 61 RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVF 120
Query 140 PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF 199
PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF
Sbjct 121 PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF 180
Query 200 KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 217
>gi|289553495|ref|ZP_06442705.1| repressor lexA [Mycobacterium tuberculosis KZN 605]
gi|289438127|gb|EFD20620.1| repressor lexA [Mycobacterium tuberculosis KZN 605]
Length=216
Score = 430 bits (1106), Expect = 8e-119, Method: Compositional matrix adjust.
Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 21 LSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLR 80
+SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLR
Sbjct 1 MSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLR 60
Query 81 RDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 140
RDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP
Sbjct 61 RDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 120
Query 141 LPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK 200
LPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK
Sbjct 121 LPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK 180
Query 201 RAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
RAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 RAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 216
>gi|254821025|ref|ZP_05226026.1| LexA repressor [Mycobacterium intracellulare ATCC 13950]
Length=236
Score = 430 bits (1105), Expect = 9e-119, Method: Compositional matrix adjust.
Identities = 217/236 (92%), Positives = 222/236 (95%), Gaps = 0/236 (0%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M DSNDTS G A AD R+ S DSALTERQRTIL+VIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MGDSNDTSPNTGPAAADGRLHSVDSALTERQRTILNVIRASVTSRGYPPSIREIGDAVGL 60
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRGADD P TEVAGSDALPEPTFVPVL
Sbjct 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGADDDVAAPATEVAGSDALPEPTFVPVL 120
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKV+GDSMVEAAICDGDWVVVRQQNVA
Sbjct 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVVGDSMVEAAICDGDWVVVRQQNVA 180
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAM+DGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 DNGDIVAAMLDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
>gi|31793892|ref|NP_856385.1| LexA repressor [Mycobacterium bovis AF2122/97]
gi|121638595|ref|YP_978819.1| LexA repressor [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991087|ref|YP_002645776.1| repressor [Mycobacterium bovis BCG str. Tokyo 172]
gi|31619486|emb|CAD94924.1| REPRESSOR LEXA [Mycobacterium bovis AF2122/97]
gi|121494243|emb|CAL72721.1| Repressor lexA [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774202|dbj|BAH27008.1| repressor [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602633|emb|CCC65309.1| Repressor lexA [Mycobacterium bovis BCG str. Moreau RDJ]
Length=217
Score = 429 bits (1104), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 215/217 (99%), Positives = 216/217 (99%), Gaps = 0/217 (0%)
Query 20 VLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL 79
+LSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL
Sbjct 1 MLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYL 60
Query 80 RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVF 139
RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTF PVLGRIAAGGPILAEEAVEDVF
Sbjct 61 RRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFAPVLGRIAAGGPILAEEAVEDVF 120
Query 140 PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF 199
PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF
Sbjct 121 PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF 180
Query 200 KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 181 KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 217
>gi|296171811|ref|ZP_06852925.1| SOS regulatory protein LexA [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295893947|gb|EFG73715.1| SOS regulatory protein LexA [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=231
Score = 422 bits (1086), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 213/236 (91%), Positives = 222/236 (95%), Gaps = 5/236 (2%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DS+DTS AG D R+ + DSALTERQRTIL+VIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MSDSSDTSSAG-----DGRLHAVDSALTERQRTILNVIRASVTSRGYPPSIREIGDAVGL 55
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRGADD P TEVAGSDALPEPTFVPVL
Sbjct 56 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGADDEVAAPATEVAGSDALPEPTFVPVL 115
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKV+GDSMVEAAICDGDWVVVRQQNVA
Sbjct 116 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVVGDSMVEAAICDGDWVVVRQQNVA 175
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAM+DGEATVKTFKRAGGQVWLMPHNPAFDPIPGN+ATVLGKVVTVIRKV
Sbjct 176 DNGDIVAAMLDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNEATVLGKVVTVIRKV 231
>gi|118618684|ref|YP_907016.1| LexA repressor [Mycobacterium ulcerans Agy99]
gi|166224637|sp|A0PT76.1|LEXA_MYCUA RecName: Full=LexA repressor
gi|118570794|gb|ABL05545.1| repressor LexA [Mycobacterium ulcerans Agy99]
Length=244
Score = 416 bits (1068), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 210/244 (87%), Positives = 224/244 (92%), Gaps = 8/244 (3%)
Query 1 MNDSNDTSVAG-------GAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIRE 53
M+DS+DT+V G GA+GAD+R D+ALTERQRTIL+VIR SV RGYPPSIRE
Sbjct 1 MSDSSDTTVDGASDGASDGASGADNRAQLVDTALTERQRTILNVIRTSVNDRGYPPSIRE 60
Query 54 IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALP-PVTEVAGSDALP 112
IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRGADD PVT+VAGSDALP
Sbjct 61 IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALP 120
Query 113 EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWV 172
EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVG+GTLFLLKV+G+SMVEAAICDGDWV
Sbjct 121 EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGQGTLFLLKVVGESMVEAAICDGDWV 180
Query 173 VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTV 232
VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQ+WLMPHNPAFDPIPGNDATVLGKVVTV
Sbjct 181 VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQIWLMPHNPAFDPIPGNDATVLGKVVTV 240
Query 233 IRKV 236
IRK+
Sbjct 241 IRKI 244
>gi|183982006|ref|YP_001850297.1| repressor LexA [Mycobacterium marinum M]
gi|229621223|sp|B2HLX8.1|LEXA_MYCMM RecName: Full=LexA repressor
gi|183175332|gb|ACC40442.1| repressor LexA [Mycobacterium marinum M]
Length=244
Score = 415 bits (1067), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 209/244 (86%), Positives = 224/244 (92%), Gaps = 8/244 (3%)
Query 1 MNDSNDTSVAG-------GAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIRE 53
M+DS+DT+V G GA+GAD+R D+ALTERQRTIL+VIR SV RGYPPSIRE
Sbjct 1 MSDSSDTTVDGASDGASDGASGADNRAQLVDTALTERQRTILNVIRTSVNDRGYPPSIRE 60
Query 54 IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALP-PVTEVAGSDALP 112
IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRGADD PVT+VAGSDALP
Sbjct 61 IGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALP 120
Query 113 EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWV 172
EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVG+GTLFLLKV+G+SM+EAAICDGDWV
Sbjct 121 EPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGQGTLFLLKVVGESMIEAAICDGDWV 180
Query 173 VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTV 232
VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQ+WLMPHNPAFDPIPGNDATVLGKVVTV
Sbjct 181 VVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQIWLMPHNPAFDPIPGNDATVLGKVVTV 240
Query 233 IRKV 236
IRK+
Sbjct 241 IRKI 244
>gi|342858411|ref|ZP_08715066.1| LexA repressor [Mycobacterium colombiense CECT 3035]
gi|342134115|gb|EGT87295.1| LexA repressor [Mycobacterium colombiense CECT 3035]
Length=217
Score = 409 bits (1052), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 204/215 (95%), Positives = 208/215 (97%), Gaps = 0/215 (0%)
Query 22 SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 81
S DS+LTERQRTIL+VIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR
Sbjct 3 SVDSSLTERQRTILNVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 62
Query 82 DPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 141
DPNRPRAV+VRGADD P TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL
Sbjct 63 DPNRPRAVDVRGADDDVAAPATEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 122
Query 142 PRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 201
PRELVGEGTLFLLKV+GDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR
Sbjct 123 PRELVGEGTLFLLKVVGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 182
Query 202 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
AGGQVWLMPHNPAFDPIPGNDA VLGKVVTVIRKV
Sbjct 183 AGGQVWLMPHNPAFDPIPGNDAAVLGKVVTVIRKV 217
>gi|240171202|ref|ZP_04749861.1| LexA repressor [Mycobacterium kansasii ATCC 12478]
Length=226
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 205/237 (87%), Positives = 214/237 (91%), Gaps = 12/237 (5%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DSN SV+ S DS LTERQRTIL+VIR SVT+RGYPPSIREIGDAVGL
Sbjct 1 MSDSNAPSVS-----------SVDSTLTERQRTILNVIRTSVTNRGYPPSIREIGDAVGL 49
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPP-VTEVAGSDALPEPTFVPV 119
TSTSSVAHQLR LERKGYLRRDPNRPRAV+VRG +D P VTEVAGSDALPEPTFVPV
Sbjct 50 TSTSSVAHQLRVLERKGYLRRDPNRPRAVDVRGVEDVVTPAAVTEVAGSDALPEPTFVPV 109
Query 120 LGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNV 179
LGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKV+GDSMVEAAICDGDWVVVRQQNV
Sbjct 110 LGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVVGDSMVEAAICDGDWVVVRQQNV 169
Query 180 ADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
ADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNP+FDPIPGNDATVLGKVVTVIRK+
Sbjct 170 ADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPSFDPIPGNDATVLGKVVTVIRKI 226
>gi|118463995|ref|YP_882791.1| LexA repressor [Mycobacterium avium 104]
gi|254776054|ref|ZP_05217570.1| LexA repressor [Mycobacterium avium subsp. avium ATCC 25291]
gi|171472974|sp|A0QIQ3.1|LEXA_MYCA1 RecName: Full=LexA repressor
gi|118165282|gb|ABK66179.1| LexA repressor [Mycobacterium avium 104]
Length=232
Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 210/236 (89%), Positives = 221/236 (94%), Gaps = 4/236 (1%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DSND+S +AG D R+ + D +LTERQRTIL+VIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MDDSNDSS----SAGPDGRLHAVDPSLTERQRTILNVIRASVTSRGYPPSIREIGDAVGL 56
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRG DD P TEVAGSDALPEPTFVPVL
Sbjct 57 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGVDDDVAAPATEVAGSDALPEPTFVPVL 116
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVG+GTLFLLKV+GDSMVEAAICDGDWVVVRQQ+VA
Sbjct 117 GRIAAGGPILAEEAVEDVFPLPRELVGDGTLFLLKVVGDSMVEAAICDGDWVVVRQQHVA 176
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 177 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 232
>gi|336458917|gb|EGO37873.1| SOS regulatory protein LexA [Mycobacterium avium subsp. paratuberculosis
S397]
Length=232
Score = 402 bits (1032), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 209/236 (89%), Positives = 221/236 (94%), Gaps = 4/236 (1%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DSND+S +AG D R+ + D +LTERQRTIL+VIR+SVTSRGYPPSIREIGDAVGL
Sbjct 1 MDDSNDSS----SAGPDGRLHAVDPSLTERQRTILNVIRSSVTSRGYPPSIREIGDAVGL 56
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRG DD P TEVAGSDALPEPTFVPVL
Sbjct 57 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGVDDDVAAPATEVAGSDALPEPTFVPVL 116
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVG+GTLFLLKV+GDSMVEAAICDGDWVVVRQQ+VA
Sbjct 117 GRIAAGGPILAEEAVEDVFPLPRELVGDGTLFLLKVVGDSMVEAAICDGDWVVVRQQHVA 176
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 177 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 232
>gi|327478520|sp|P61612.2|LEXA_MYCPA RecName: Full=LexA repressor
Length=232
Score = 399 bits (1026), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 208/236 (89%), Positives = 220/236 (94%), Gaps = 4/236 (1%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DSND+S +AG D R+ + D +LTERQRTIL+VIR+SVTSRGYPPSIREIGDAVGL
Sbjct 1 MDDSNDSS----SAGPDGRLHAVDPSLTERQRTILNVIRSSVTSRGYPPSIREIGDAVGL 56
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVL 120
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VRG DD P TEVAGSDALPEPTFVPVL
Sbjct 57 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRGVDDDVAAPATEVAGSDALPEPTFVPVL 116
Query 121 GRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVA 180
GRIAAGGPILAEEAVEDVFPLPRELVG+GTLFLLKV+GDSMVEAAICDGDWVVVRQQ+VA
Sbjct 117 GRIAAGGPILAEEAVEDVFPLPRELVGDGTLFLLKVVGDSMVEAAICDGDWVVVRQQHVA 176
Query 181 DNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
DN DIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 177 DNADIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 232
>gi|15827479|ref|NP_301742.1| LexA repressor [Mycobacterium leprae TN]
gi|221229956|ref|YP_002503372.1| LexA repressor [Mycobacterium leprae Br4923]
gi|254809104|sp|B8ZQU5.1|LEXA_MYCLB RecName: Full=LexA repressor
gi|327478573|sp|Q49848.3|LEXA_MYCLE RecName: Full=LexA repressor
gi|467099|gb|AAA17282.1| lexA [Mycobacterium leprae]
gi|13093029|emb|CAC31384.1| LexA, SOS repressor protein [Mycobacterium leprae]
gi|219933063|emb|CAR71098.1| LexA, SOS repressor protein [Mycobacterium leprae Br4923]
Length=235
Score = 392 bits (1008), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 202/239 (85%), Positives = 211/239 (89%), Gaps = 7/239 (2%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+DS D S D R+ S DS LTERQRTIL+VIRASVTSRGYPPSIREI DAVGL
Sbjct 1 MSDSTDIS----GITVDGRLHSMDSGLTERQRTILNVIRASVTSRGYPPSIREIADAVGL 56
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADD--AALPPV-TEVAGSDALPEPTFV 117
TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRG ++ AA P V TEVAGSD LPEPTFV
Sbjct 57 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGVEETQAAGPAVLTEVAGSDVLPEPTFV 116
Query 118 PVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQ 177
P+LGRIAAG PI AE VED+FPLPRELVGEGTLFLLKV GDSMVEAAICDGDWVVVRQQ
Sbjct 117 PILGRIAAGSPIFAEGTVEDIFPLPRELVGEGTLFLLKVTGDSMVEAAICDGDWVVVRQQ 176
Query 178 NVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VADNGDIVAAMIDGEATVKTFKRAGGQVWL+PHNPAFDPIPGNDATVLGKVVTVIRK+
Sbjct 177 KVADNGDIVAAMIDGEATVKTFKRAGGQVWLIPHNPAFDPIPGNDATVLGKVVTVIRKI 235
>gi|120403431|ref|YP_953260.1| LexA repressor [Mycobacterium vanbaalenii PYR-1]
gi|171769146|sp|A1T7V4.1|LEXA_MYCVP RecName: Full=LexA repressor
gi|119956249|gb|ABM13254.1| SOS-response transcriptional repressor, LexA [Mycobacterium vanbaalenii
PYR-1]
Length=232
Score = 392 bits (1006), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 194/214 (91%), Positives = 206/214 (97%), Gaps = 1/214 (0%)
Query 24 DSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP 83
DS LTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP
Sbjct 19 DSGLTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP 78
Query 84 NRPRAVNVRGADDAALPPV-TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLP 142
NRPRAV+VRG+DD A P V T+VAGSD+LPEPTFVPVLGRIAAGGPILAEEAVEDVFPLP
Sbjct 79 NRPRAVDVRGSDDHAAPIVATDVAGSDSLPEPTFVPVLGRIAAGGPILAEEAVEDVFPLP 138
Query 143 RELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRA 202
RELVGEG+LFLLKV+G+SM++AAICDGDWVVVRQQ+VADNGDIVAAMIDGEATVKTFKR
Sbjct 139 RELVGEGSLFLLKVVGESMIDAAICDGDWVVVRQQSVADNGDIVAAMIDGEATVKTFKRT 198
Query 203 GGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
GQVWLMPHNPAFDPIPGNDA +LGKVVTVIRK+
Sbjct 199 KGQVWLMPHNPAFDPIPGNDAAILGKVVTVIRKI 232
>gi|145224537|ref|YP_001135215.1| LexA repressor [Mycobacterium gilvum PYR-GCK]
gi|315444868|ref|YP_004077747.1| SOS-response transcriptional repressor, LexA [Mycobacterium sp.
Spyr1]
gi|189046541|sp|A4TCN9.1|LEXA_MYCGI RecName: Full=LexA repressor
gi|145217023|gb|ABP46427.1| SOS-response transcriptional repressor, LexA [Mycobacterium gilvum
PYR-GCK]
gi|315263171|gb|ADT99912.1| SOS-response transcriptional repressor, LexA [Mycobacterium sp.
Spyr1]
Length=232
Score = 389 bits (999), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 195/216 (91%), Positives = 204/216 (95%), Gaps = 1/216 (0%)
Query 22 SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 81
S DS LTERQRTILDVIRASVT+RGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR
Sbjct 17 SRDSGLTERQRTILDVIRASVTTRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 76
Query 82 DPNRPRAVNVRGADDAALPPV-TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 140
D NRPRAV+VR ADD P V TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP
Sbjct 77 DANRPRAVDVRAADDHPTPIVATEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 136
Query 141 LPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK 200
LPRELVGEG+LFLLKV+G+SMV+AAICDGDWVVVRQQ+VADNGDIVAAMIDGEATVKTFK
Sbjct 137 LPRELVGEGSLFLLKVVGESMVDAAICDGDWVVVRQQSVADNGDIVAAMIDGEATVKTFK 196
Query 201 RAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
R GQVWLMPHNPAFDPIPGNDA +LGKVVTVIRK+
Sbjct 197 RTKGQVWLMPHNPAFDPIPGNDAAILGKVVTVIRKI 232
>gi|108799135|ref|YP_639332.1| LexA repressor [Mycobacterium sp. MCS]
gi|119868250|ref|YP_938202.1| LexA repressor [Mycobacterium sp. KMS]
gi|126434743|ref|YP_001070434.1| LexA repressor [Mycobacterium sp. JLS]
6 more sequence titles
Length=230
Score = 389 bits (998), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 199/237 (84%), Positives = 214/237 (91%), Gaps = 8/237 (3%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+D + + GG GAD+ LTERQRTIL+VIRASVTSRGYPPSIREIGDAVGL
Sbjct 1 MSDDSSETRTGGRRGADA-------GLTERQRTILEVIRASVTSRGYPPSIREIGDAVGL 53
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVT-EVAGSDALPEPTFVPV 119
TSTSSVAHQLRTLERKGYLRRDPNRPRAV+VR +D+ A P VT +VAGSDALPEPTFVPV
Sbjct 54 TSTSSVAHQLRTLERKGYLRRDPNRPRAVDVRLSDEPATPVVTTDVAGSDALPEPTFVPV 113
Query 120 LGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNV 179
LGRIAAGGPILAEEAVEDVFPLPRELVGEG+LFLLKV+GDSMV+AAICDGDWVVVRQQ V
Sbjct 114 LGRIAAGGPILAEEAVEDVFPLPRELVGEGSLFLLKVVGDSMVDAAICDGDWVVVRQQAV 173
Query 180 ADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
ADNGDIVAAMIDGEATVKTFKR+ GQVWLMPHNPAF+PIPGNDA VLGKVVTVIRK+
Sbjct 174 ADNGDIVAAMIDGEATVKTFKRSRGQVWLMPHNPAFEPIPGNDAAVLGKVVTVIRKI 230
>gi|41408934|ref|NP_961770.1| LexA repressor [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41397293|gb|AAS05153.1| LexA [Mycobacterium avium subsp. paratuberculosis K-10]
Length=217
Score = 385 bits (990), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 198/215 (93%), Positives = 206/215 (96%), Gaps = 0/215 (0%)
Query 22 SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 81
+ D +LTERQRTIL+VIR+SVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR
Sbjct 3 AVDPSLTERQRTILNVIRSSVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 62
Query 82 DPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 141
DPNRPRAV+VRG DD P TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL
Sbjct 63 DPNRPRAVDVRGVDDDVAAPATEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 122
Query 142 PRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 201
PRELVG+GTLFLLKV+GDSMVEAAICDGDWVVVRQQ+VADN DIVAAMIDGEATVKTFKR
Sbjct 123 PRELVGDGTLFLLKVVGDSMVEAAICDGDWVVVRQQHVADNADIVAAMIDGEATVKTFKR 182
Query 202 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV
Sbjct 183 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 217
>gi|333991099|ref|YP_004523713.1| repressor LexA [Mycobacterium sp. JDM601]
gi|333487067|gb|AEF36459.1| repressor LexA [Mycobacterium sp. JDM601]
Length=227
Score = 380 bits (977), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 190/216 (88%), Positives = 200/216 (93%), Gaps = 3/216 (1%)
Query 24 DSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP 83
DS LT RQRTIL VIRASV+ RGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP
Sbjct 12 DSTLTARQRTILSVIRASVSERGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDP 71
Query 84 NRPRAVNVRGADDAA---LPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 140
NRPRAV+VRG +++ P ++VAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP
Sbjct 72 NRPRAVDVRGPEESTGSDAAPRSDVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFP 131
Query 141 LPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK 200
LPRELVGEG LFLLKV+G+SMV+AAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK
Sbjct 132 LPRELVGEGELFLLKVVGESMVDAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFK 191
Query 201 RAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
R GGQVWLMPHNP FDPIPGNDA VLGKVVTVIRKV
Sbjct 192 RTGGQVWLMPHNPVFDPIPGNDAVVLGKVVTVIRKV 227
>gi|169630121|ref|YP_001703770.1| LexA repressor [Mycobacterium abscessus ATCC 19977]
gi|229621222|sp|B1MCZ5.1|LEXA_MYCA9 RecName: Full=LexA repressor
gi|169242088|emb|CAM63116.1| Probable repressor LexA [Mycobacterium abscessus]
Length=224
Score = 374 bits (959), Expect = 8e-102, Method: Compositional matrix adjust.
Identities = 186/215 (87%), Positives = 198/215 (93%), Gaps = 1/215 (0%)
Query 23 ADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRD 82
A +LTERQRTIL+VIRASV RGYPPSIREIGDAVGLTSTSSVAHQLRTLE+KG+LRRD
Sbjct 10 ATGSLTERQRTILEVIRASVNERGYPPSIREIGDAVGLTSTSSVAHQLRTLEQKGFLRRD 69
Query 83 PNRPRAVNVRGADDAALPP-VTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 141
PNRPRAV+VRG DDA P T+V GS LPEPTFVPVLGRIAAGGPILAEEAVEDVFPL
Sbjct 70 PNRPRAVDVRGIDDAGTPSATTDVIGSGDLPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 129
Query 142 PRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 201
PRELVGEG+LFLLKV+G+SMV+AAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR
Sbjct 130 PRELVGEGSLFLLKVVGESMVDAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 189
Query 202 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
GQVWLMPHNP F+PIPGNDA +LGKVVTVIRKV
Sbjct 190 TSGQVWLMPHNPLFEPIPGNDAAILGKVVTVIRKV 224
>gi|118468004|ref|YP_887073.1| LexA repressor [Mycobacterium smegmatis str. MC2 155]
gi|171472978|sp|A0QVY5.1|LEXA_MYCS2 RecName: Full=LexA repressor
gi|71360996|emb|CAJ19247.1| LexA protein [Mycobacterium smegmatis]
gi|118169291|gb|ABK70187.1| LexA repressor [Mycobacterium smegmatis str. MC2 155]
Length=243
Score = 374 bits (959), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 195/220 (89%), Positives = 206/220 (94%), Gaps = 2/220 (0%)
Query 19 RVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGY 78
R + D+ LTERQRTIL+VIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGY
Sbjct 24 RRRAVDNGLTERQRTILEVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGY 83
Query 79 LRRDPNRPRAVNVRGADDAALPP--VTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVE 136
LRRDPNRPRAV+VR ADD A T+VAGSDALPEPTFVPVLGRIAAGGPILAEEAVE
Sbjct 84 LRRDPNRPRAVDVRAADDPAAAAVVTTDVAGSDALPEPTFVPVLGRIAAGGPILAEEAVE 143
Query 137 DVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATV 196
DVFPLPRELVGEG+LFLLKV+GDSMV+AAICDGDWVVVRQQNVADNGDIVAAMIDGEATV
Sbjct 144 DVFPLPRELVGEGSLFLLKVVGDSMVDAAICDGDWVVVRQQNVADNGDIVAAMIDGEATV 203
Query 197 KTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
KTFKRA GQVWLMPHNPA+DPIPGN+A VLGKVVTVIRK+
Sbjct 204 KTFKRARGQVWLMPHNPAYDPIPGNEAAVLGKVVTVIRKI 243
>gi|226306263|ref|YP_002766223.1| LexA repressor [Rhodococcus erythropolis PR4]
gi|226185380|dbj|BAH33484.1| LexA repressor [Rhodococcus erythropolis PR4]
Length=242
Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/241 (73%), Positives = 202/241 (84%), Gaps = 8/241 (3%)
Query 4 SNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTST 63
+D S AGA + + LTERQR +L+VIR SVT RGYPPSIREIGDAVGLTST
Sbjct 2 KDDRSSTAAEAGASAVPSPSSETLTERQRRVLEVIRDSVTERGYPPSIREIGDAVGLTST 61
Query 64 SSVAHQLRTLERKGYLRRDPNRPRAVNVRGAD----DAALPPVTEVAG----SDALPEPT 115
SSVAHQLRTLERKG+LRRDPNRPRAV+VRG D D A+ V++ +G +D LPEP
Sbjct 62 SSVAHQLRTLERKGFLRRDPNRPRAVDVRGLDEVAADTAIASVSKHSGEYNSADPLPEPA 121
Query 116 FVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVR 175
FVP+LGRIAAGGPILAEEAVEDVFPLPRELVG+G+LF+LKV+G+SM++AAICDGDWVVVR
Sbjct 122 FVPILGRIAAGGPILAEEAVEDVFPLPRELVGQGSLFMLKVVGESMIDAAICDGDWVVVR 181
Query 176 QQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRK 235
QQNVA+NGDIVAAMIDGEATVKTFKR +VWLMPHN F+PIPGN+A +LGKVVTV+RK
Sbjct 182 QQNVAENGDIVAAMIDGEATVKTFKRTKKEVWLMPHNELFEPIPGNNAVILGKVVTVMRK 241
Query 236 V 236
+
Sbjct 242 I 242
>gi|229490829|ref|ZP_04384664.1| repressor LexA [Rhodococcus erythropolis SK121]
gi|229322219|gb|EEN88005.1| repressor LexA [Rhodococcus erythropolis SK121]
Length=242
Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/241 (73%), Positives = 202/241 (84%), Gaps = 8/241 (3%)
Query 4 SNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTST 63
+D S AGA + + LTERQR +L+VIR SVT RGYPPSIREIGDAVGLTST
Sbjct 2 KDDRSSTAAEAGASAVPSPSSETLTERQRRVLEVIRDSVTERGYPPSIREIGDAVGLTST 61
Query 64 SSVAHQLRTLERKGYLRRDPNRPRAVNVRGAD----DAALPPVTEVAG----SDALPEPT 115
SSVAHQLRTLERKG+LRRDPNRPRAV+VRG D D A+ V++ +G +D LPEP
Sbjct 62 SSVAHQLRTLERKGFLRRDPNRPRAVDVRGLDEVAADTAIASVSKHSGEHNSADPLPEPA 121
Query 116 FVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVR 175
FVP+LGRIAAGGPILAEEAVEDVFPLPRELVG+G+LF+LKV+G+SM++AAICDGDWVVVR
Sbjct 122 FVPILGRIAAGGPILAEEAVEDVFPLPRELVGQGSLFMLKVVGESMIDAAICDGDWVVVR 181
Query 176 QQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRK 235
QQNVA+NGDIVAAMIDGEATVKTFKR +VWLMPHN F+PIPGN+A +LGKVVTV+RK
Sbjct 182 QQNVAENGDIVAAMIDGEATVKTFKRTKKEVWLMPHNDLFEPIPGNNAVILGKVVTVMRK 241
Query 236 V 236
+
Sbjct 242 I 242
>gi|226366183|ref|YP_002783966.1| LexA repressor [Rhodococcus opacus B4]
gi|226244673|dbj|BAH55021.1| LexA repressor [Rhodococcus opacus B4]
Length=243
Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/247 (73%), Positives = 201/247 (82%), Gaps = 22/247 (8%)
Query 2 NDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLT 61
D + V+GG+A + LT+RQR +L+VIR SV RGYPPSIREIGDAVGLT
Sbjct 7 TDGSTPRVSGGSA----------AGLTDRQRRVLEVIRTSVNERGYPPSIREIGDAVGLT 56
Query 62 STSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEV----------AGSDA- 110
STSSVAHQLRTLERKG+LRRDPNRPRAV+VRG D+ A +G+D+
Sbjct 57 STSSVAHQLRTLERKGFLRRDPNRPRAVDVRGLDEVAAGAAANAGAAVGLAAVKSGTDSA 116
Query 111 -LPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDG 169
LPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVG+G+LFLLKV+G+SM++AAICDG
Sbjct 117 PLPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGQGSLFLLKVVGESMIDAAICDG 176
Query 170 DWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKV 229
DWVVVRQQNVADNGDIVAAMIDGEATVKTFKR +VWLMPHNP FDPIPGNDA +LGKV
Sbjct 177 DWVVVRQQNVADNGDIVAAMIDGEATVKTFKRTDSEVWLMPHNPLFDPIPGNDAAILGKV 236
Query 230 VTVIRKV 236
VTV+RK+
Sbjct 237 VTVMRKI 243
>gi|111023746|ref|YP_706718.1| LexA repressor [Rhodococcus jostii RHA1]
gi|110823276|gb|ABG98560.1| repressor LexA [Rhodococcus jostii RHA1]
Length=243
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/247 (72%), Positives = 198/247 (81%), Gaps = 22/247 (8%)
Query 2 NDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLT 61
D + V+GG+A + LT+RQR +L+VIR SV RGYPPSIREIGDAVGLT
Sbjct 7 TDGSTPRVSGGSA----------AGLTDRQRRVLEVIRTSVNERGYPPSIREIGDAVGLT 56
Query 62 STSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDA------------ALPPVTEVAGSD 109
STSSVAHQLRTLERKG+LRRDPNRPRAV+VRG D+ L V A
Sbjct 57 STSSVAHQLRTLERKGFLRRDPNRPRAVDVRGLDEVAAGAAANASAAVGLAAVKSGADGA 116
Query 110 ALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDG 169
LPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVG+G+LFLLKV+G+SM++AAICDG
Sbjct 117 PLPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGQGSLFLLKVVGESMIDAAICDG 176
Query 170 DWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKV 229
DWVVVRQQNVA+NGDIVAAMIDGEATVKTFKR +VWLMPHNP FDPIPGNDA +LGKV
Sbjct 177 DWVVVRQQNVAENGDIVAAMIDGEATVKTFKRTENEVWLMPHNPLFDPIPGNDAVILGKV 236
Query 230 VTVIRKV 236
VTV+RK+
Sbjct 237 VTVMRKI 243
>gi|312139399|ref|YP_004006735.1| lexa repressor [Rhodococcus equi 103S]
gi|325672718|ref|ZP_08152414.1| SOS regulatory protein LexA [Rhodococcus equi ATCC 33707]
gi|311888738|emb|CBH48050.1| LexA repressor [Rhodococcus equi 103S]
gi|325556595|gb|EGD26261.1| SOS regulatory protein LexA [Rhodococcus equi ATCC 33707]
Length=242
Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/215 (82%), Positives = 190/215 (89%), Gaps = 7/215 (3%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT RQR +L+VIRASV RGYPPSIREIGDAVGLTSTSSVAHQLRTLERKG+LRRD N
Sbjct 32 SQLTPRQRKVLEVIRASVAERGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGFLRRDAN 91
Query 85 RPRAVNVRGAD---DAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 141
RPRAV+VRG D DAA TE GS P PTFVPVLGRIAAGGPILAEEAVEDVFPL
Sbjct 92 RPRAVDVRGLDGIEDAA----TERDGSGDRPAPTFVPVLGRIAAGGPILAEEAVEDVFPL 147
Query 142 PRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 201
PRELVG+G+LFLLKV+G+SM++AAICDGDWVVVRQQNVA+NGDIVAAMIDGEATVKTFKR
Sbjct 148 PRELVGQGSLFLLKVVGESMIDAAICDGDWVVVRQQNVAENGDIVAAMIDGEATVKTFKR 207
Query 202 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
G VWLMPHNP F+PIPGNDA +LGKVVTV+RK+
Sbjct 208 TGKDVWLMPHNPLFEPIPGNDAAILGKVVTVMRKL 242
>gi|54025770|ref|YP_120012.1| LexA repressor [Nocardia farcinica IFM 10152]
gi|71658805|sp|Q5YT43.1|LEXA2_NOCFA RecName: Full=LexA repressor 2
gi|54017278|dbj|BAD58648.1| putative repressor of the SOS regulon [Nocardia farcinica IFM
10152]
Length=243
Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/246 (73%), Positives = 199/246 (81%), Gaps = 13/246 (5%)
Query 1 MNDSNDTSVAGGAAGADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGL 60
M+ ++DT G A D + AD LT RQR +L+VIR SV+ RGYPPSIREIGDAVGL
Sbjct 1 MSRTDDTGEESGVA-VDPALNGAD--LTVRQRKVLEVIRTSVSERGYPPSIREIGDAVGL 57
Query 61 TSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDA----------ALPPVTEVAGSDA 110
TSTSSVAHQLR LERKGYLRRDPNRPRAV+VRG D+A AL +A
Sbjct 58 TSTSSVAHQLRALERKGYLRRDPNRPRAVDVRGLDEAVRAVTALPGAALEEPDTLAEDTG 117
Query 111 LPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGD 170
P PTFVPVLGRIAAGGPILAE+AVEDVFPLPRELVG+G+LFLL+V+G SMV+AAICDGD
Sbjct 118 RPTPTFVPVLGRIAAGGPILAEQAVEDVFPLPRELVGDGSLFLLRVVGQSMVDAAICDGD 177
Query 171 WVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVV 230
WVVVRQQNVA+NGDIVAAMIDGEATVKTFKR G VWLMPHNP F+PIPGNDA +LGKVV
Sbjct 178 WVVVRQQNVAENGDIVAAMIDGEATVKTFKRTGKDVWLMPHNPLFEPIPGNDARILGKVV 237
Query 231 TVIRKV 236
TVIRK+
Sbjct 238 TVIRKI 243
>gi|326384481|ref|ZP_08206161.1| LexA repressor [Gordonia neofelifaecis NRRL B-59395]
gi|326196826|gb|EGD54020.1| LexA repressor [Gordonia neofelifaecis NRRL B-59395]
Length=239
Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/217 (77%), Positives = 193/217 (89%), Gaps = 5/217 (2%)
Query 22 SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 81
+ +++LT+RQR +L+VIR SV RGYPPSIREIG+AVGLTSTSSVAHQLRTLER+G L+R
Sbjct 26 TLEASLTQRQREVLEVIRKSVRERGYPPSIREIGEAVGLTSTSSVAHQLRTLERRGLLKR 85
Query 82 DPNRPRAVNVRGADDAALPPV--TEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVF 139
DP+RPRAVNVR DD PP EV G DALP PTFVPVLGRIAAGGPILAE+AVE+VF
Sbjct 86 DPHRPRAVNVR--DDQRTPPAGAAEVDG-DALPTPTFVPVLGRIAAGGPILAEQAVEEVF 142
Query 140 PLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTF 199
P+PRELVG+G+LF+L+V+G+SM++AAICDGDWVVVRQQNVA+NGDIVAAMIDGEATVKTF
Sbjct 143 PMPRELVGDGSLFMLRVVGESMIDAAICDGDWVVVRQQNVAENGDIVAAMIDGEATVKTF 202
Query 200 KRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
KR G VWLMPHN F+PIPG+DA VLGKVVTV+R++
Sbjct 203 KRVDGHVWLMPHNEHFEPIPGDDAAVLGKVVTVMRRI 239
>gi|296139522|ref|YP_003646765.1| transcriptional repressor, LexA family [Tsukamurella paurometabola
DSM 20162]
gi|296027656|gb|ADG78426.1| transcriptional repressor, LexA family [Tsukamurella paurometabola
DSM 20162]
Length=236
Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/215 (75%), Positives = 186/215 (87%), Gaps = 1/215 (0%)
Query 23 ADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRD 82
++ LT RQ+ +L+VIR SV RGYPPSIREIGD VGLTSTSSVAHQLRTLER G+L RD
Sbjct 22 SEDHLTRRQKQVLEVIRRSVRDRGYPPSIREIGDEVGLTSTSSVAHQLRTLERLGFLHRD 81
Query 83 PNRPRAVNVRGADDAALPPVTEV-AGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPL 141
PNRPRAVNV+G ++ + V + +PEP FVPVLGRIAAGGPILAEEAVE++FPL
Sbjct 82 PNRPRAVNVQGTEERTAQVIQRVMEDEERMPEPAFVPVLGRIAAGGPILAEEAVEEIFPL 141
Query 142 PRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKR 201
PRELVGEG+LFLLKV+G+SMV+AAICDGDWVVVRQQ+VA+NGDIVAAM+DGEATVKTF+R
Sbjct 142 PRELVGEGSLFLLKVVGESMVDAAICDGDWVVVRQQSVAENGDIVAAMLDGEATVKTFRR 201
Query 202 AGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
G VWLMPHNPAFDPI GNDA VLGKVVTV+R++
Sbjct 202 TGKDVWLMPHNPAFDPIHGNDAVVLGKVVTVMRRI 236
>gi|262202154|ref|YP_003273362.1| LexA repressor [Gordonia bronchialis DSM 43247]
gi|262085501|gb|ACY21469.1| LexA repressor [Gordonia bronchialis DSM 43247]
Length=233
Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/232 (73%), Positives = 193/232 (84%), Gaps = 15/232 (6%)
Query 12 GAAGAD-------SRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTS 64
GA GAD + + A+++LT RQR +LDVIR SV RGYPPSIREIGDAVGLTSTS
Sbjct 10 GARGADRDQDTTPADPIVAEASLTPRQRGVLDVIRKSVRERGYPPSIREIGDAVGLTSTS 69
Query 65 SVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIA 124
SVAHQLRTLERKG L+RD NRPRAVNV+ ++ A ++ LP PTFVPVLGRIA
Sbjct 70 SVAHQLRTLERKGLLKRDHNRPRAVNVQESEPAP--------SAENLPTPTFVPVLGRIA 121
Query 125 AGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGD 184
AGGPILAEEAVEDVFPLPRELVG+G+LFLL+V+G+SM++AAICDGDWVVVRQQNVADNGD
Sbjct 122 AGGPILAEEAVEDVFPLPRELVGDGSLFLLRVVGESMIDAAICDGDWVVVRQQNVADNGD 181
Query 185 IVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
IVAAMIDGEATVKTFKR G +WLMPHN F PIPG+DA +LGKVVTV+R+V
Sbjct 182 IVAAMIDGEATVKTFKRKDGHIWLMPHNEHFQPIPGDDAAILGKVVTVMRRV 233
>gi|343926991|ref|ZP_08766479.1| LexA repressor [Gordonia alkanivorans NBRC 16433]
gi|343763049|dbj|GAA13405.1| LexA repressor [Gordonia alkanivorans NBRC 16433]
Length=235
Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/238 (74%), Positives = 194/238 (82%), Gaps = 9/238 (3%)
Query 4 SNDTSVAGGAAGADSRVLSADS-----ALTERQRTILDVIRASVTSRGYPPSIREIGDAV 58
S+D GA GAD V AD +LT RQR +L+VIR SV RGYPPSIREIGD V
Sbjct 2 SDDGGKRTGARGADEPVAPADMAAAEASLTPRQRGVLEVIRKSVRERGYPPSIREIGDEV 61
Query 59 GLTSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVP 118
GLTSTSSVAHQLRTLERKG L+RD NRPRAVN+ A P + G ALPEPTFVP
Sbjct 62 GLTSTSSVAHQLRTLERKGLLKRDANRPRAVNI--APSEPPTPTSPTGG--ALPEPTFVP 117
Query 119 VLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQN 178
VLGRIAAGGPILAEEAVEDVFPLPRELVGEG+LFLLKV+G+SM++AAICDGDWVVVRQQN
Sbjct 118 VLGRIAAGGPILAEEAVEDVFPLPRELVGEGSLFLLKVVGESMIDAAICDGDWVVVRQQN 177
Query 179 VADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VADNGDIVAAMIDGEATVKTFKR G VWLMPHN FDPIPG++A +LGKVVTV+R++
Sbjct 178 VADNGDIVAAMIDGEATVKTFKRQKGHVWLMPHNELFDPIPGDEAVILGKVVTVMRRI 235
>gi|284992288|ref|YP_003410842.1| LexA family transcriptional regulator [Geodermatophilus obscurus
DSM 43160]
gi|284065533|gb|ADB76471.1| transcriptional repressor, LexA family [Geodermatophilus obscurus
DSM 43160]
Length=263
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/218 (72%), Positives = 186/218 (86%), Gaps = 3/218 (1%)
Query 22 SADSALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRR 81
A LT+RQR +L+VIR S+ RGYPPS+REIG+AVGL+S SSVAHQL L++KG+LRR
Sbjct 46 EAGDGLTQRQRRVLEVIRDSIERRGYPPSVREIGEAVGLSSASSVAHQLSVLQKKGWLRR 105
Query 82 DPNRPRAVNVRGADDAA---LPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDV 138
DPNRPRA++VR D+A P V G++ P PT+VP++GRIAAGGP+LAE+AVEDV
Sbjct 106 DPNRPRALDVRLPGDSAGASAPTVVAPVGAEETPAPTYVPLVGRIAAGGPVLAEQAVEDV 165
Query 139 FPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKT 198
FPLPRELVGEGTLF+LKV GDSMVEAAICDGDWVVVRQQ A+NG+IVAAMIDGEATVKT
Sbjct 166 FPLPRELVGEGTLFMLKVTGDSMVEAAICDGDWVVVRQQPTAENGEIVAAMIDGEATVKT 225
Query 199 FKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
+KR G VWL+PHNPA++PIPG+DATVLG+VVTV+R+V
Sbjct 226 YKRRDGHVWLLPHNPAYEPIPGDDATVLGRVVTVLRRV 263
>gi|258654104|ref|YP_003203260.1| SOS-response transcriptional repressor LexA [Nakamurella multipartita
DSM 44233]
gi|258557329|gb|ACV80271.1| SOS-response transcriptional repressor, LexA [Nakamurella multipartita
DSM 44233]
Length=252
Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/210 (74%), Positives = 179/210 (86%), Gaps = 4/210 (1%)
Query 27 LTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPNRP 86
LT RQ IL VIR SV RGYPPS+REIGDA GL S SSVAHQL+ LE++G LRRDPNRP
Sbjct 47 LTMRQHKILQVIRDSVERRGYPPSVREIGDAAGLKSPSSVAHQLKVLEKRGLLRRDPNRP 106
Query 87 RAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRELV 146
RAV++R DDA P TE + LP P++VPV+GRIAAGGPILAE+A+EDVFPLP+E+V
Sbjct 107 RAVDIRPLDDAM--PDTE--ATHPLPSPSYVPVVGRIAAGGPILAEQAIEDVFPLPKEIV 162
Query 147 GEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGGQV 206
GEGTLFLLKV+GDSM++AAI DGDWVVVRQQ VADNGDIVAAMIDGEATVKTFKR G V
Sbjct 163 GEGTLFLLKVVGDSMIDAAITDGDWVVVRQQPVADNGDIVAAMIDGEATVKTFKRKDGHV 222
Query 207 WLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
WLMPHN A++PIPG++A VLG+VVTV+RK+
Sbjct 223 WLMPHNAAYEPIPGDEAVVLGRVVTVLRKL 252
>gi|302554607|ref|ZP_07306949.1| LexA repressor [Streptomyces viridochromogenes DSM 40736]
gi|302472225|gb|EFL35318.1| LexA repressor [Streptomyces viridochromogenes DSM 40736]
Length=259
Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 181/212 (86%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQAASVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNAAYEPIPGDDATILGKVVAVLRRV 259
>gi|302557999|ref|ZP_07310341.1| LexA repressor [Streptomyces griseoflavus Tu4000]
gi|302475617|gb|EFL38710.1| LexA repressor [Streptomyces griseoflavus Tu4000]
Length=259
Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 181/212 (86%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQAASVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNAAYEPIPGDDATILGKVVAVLRRV 259
>gi|294631831|ref|ZP_06710391.1| LexA repressor [Streptomyces sp. e14]
gi|292835164|gb|EFF93513.1| LexA repressor [Streptomyces sp. e14]
Length=259
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 180/212 (85%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ G P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQAATLQPTDTVGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAMIDGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQQVAENGDIVAAMIDGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNAAYEPIPGDDATILGKVVAVLRRV 259
>gi|290956952|ref|YP_003488134.1| SOS repressor LexA [Streptomyces scabiei 87.22]
gi|260646478|emb|CBG69575.1| SOS repressor LexA [Streptomyces scabiei 87.22]
Length=258
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 182/212 (86%), Gaps = 4/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D A+ P T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQASAQP-TDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 166
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 167 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 226
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 227 HVWLLPHNAAYEPIPGDDATILGKVVAVLRRV 258
>gi|289768659|ref|ZP_06528037.1| LexA repressor [Streptomyces lividans TK24]
gi|68449792|emb|CAJ01780.1| SOS regulatory protein LexA [Streptomyces coelicolor A3(2)]
gi|289698858|gb|EFD66287.1| LexA repressor [Streptomyces lividans TK24]
Length=259
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 181/212 (86%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQAASVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNSAYEPIPGDDATILGKVVAVLRRV 259
>gi|21224148|ref|NP_629927.1| LexA repressor [Streptomyces coelicolor A3(2)]
gi|13431608|sp|O69979.1|LEXA_STRCO RecName: Full=LexA repressor
gi|2995311|emb|CAA18339.1| SOS regulatory protein [Streptomyces coelicolor A3(2)]
Length=234
Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/212 (72%), Positives = 181/212 (86%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 26 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 85
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 86 RPRAYEVRGSDQAASVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 142
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 143 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 202
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 203 HVWLLPHNSAYEPIPGDDATILGKVVAVLRRV 234
>gi|291436850|ref|ZP_06576240.1| LexA repressor [Streptomyces ghanaensis ATCC 14672]
gi|291339745|gb|EFE66701.1| LexA repressor [Streptomyces ghanaensis ATCC 14672]
Length=259
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/212 (71%), Positives = 180/212 (85%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA + AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQAAPVQPADTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKRENG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNAAYEPIPGDDATILGKVVAVLRRV 259
>gi|297202845|ref|ZP_06920242.1| LexA repressor [Streptomyces sviceus ATCC 29083]
gi|197717329|gb|EDY61363.1| LexA repressor [Streptomyces sviceus ATCC 29083]
Length=259
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/212 (71%), Positives = 180/212 (85%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D A T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQGASVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM++GEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 228 HVWLLPHNSAYEPIPGDDATILGKVVAVLRRV 259
>gi|328885526|emb|CCA58765.1| SOS-response repressor and protease LexA [Streptomyces venezuelae
ATCC 10712]
Length=262
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 190/240 (80%), Gaps = 12/240 (5%)
Query 5 NDTSVAGGAAGADSRVL-------SADSA-LTERQRTILDVIRASVTSRGYPPSIREIGD 56
ND S+ G G +R L ADS+ LT+RQR +++VIR SV RGYPPS+REIG
Sbjct 27 NDASMNGEEPGRPARALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQ 86
Query 57 AVGLTSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTF 116
AVGL+STSSVAHQL LERKG+LRRDP+RPRA VRG+D P T+ + P ++
Sbjct 87 AVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQ----PSTQPTDTTGKPAASY 142
Query 117 VPVLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQ 176
VP++GRIAAGGPILAEE+VEDVFPLPR+LVG+G LF+LKV+GDSM+EAAICDGDWV VR+
Sbjct 143 VPLVGRIAAGGPILAEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRR 202
Query 177 QNVADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
Q VA+NGDIVAAM+DGEATVK FKR G VWL+PHN A+ PIPG++AT+LGKVV V+R+V
Sbjct 203 QPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYQPIPGDEATILGKVVAVLRRV 262
>gi|294815512|ref|ZP_06774155.1| LexA repressor [Streptomyces clavuligerus ATCC 27064]
gi|326443863|ref|ZP_08218597.1| LexA repressor [Streptomyces clavuligerus ATCC 27064]
gi|3402269|emb|CAA12169.1| LexA protein [Streptomyces clavuligerus]
gi|294328111|gb|EFG09754.1| LexA repressor [Streptomyces clavuligerus ATCC 27064]
Length=264
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/212 (70%), Positives = 178/212 (84%), Gaps = 4/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 57 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 116
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D P + A + P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 117 RPRAYEVRGSDQ----PSAQPADTSGKPAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 172
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 173 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKRENG 232
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A+ PIPG+DAT+LGKVV V+R+V
Sbjct 233 HVWLLPHNAAYQPIPGDDATILGKVVAVLRRV 264
>gi|297156722|gb|ADI06434.1| LexA repressor [Streptomyces bingchenggensis BCW-1]
Length=267
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/212 (70%), Positives = 179/212 (85%), Gaps = 4/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 60 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 119
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D P T+ A + P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 120 RPRAYEVRGSDQ----PSTQPADTTGKPAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 175
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 176 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 235
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A+ PIPG++AT+LGKVV V+R+V
Sbjct 236 HVWLLPHNAAYQPIPGDEATILGKVVAVLRRV 267
>gi|29829005|ref|NP_823639.1| LexA repressor [Streptomyces avermitilis MA-4680]
gi|29606111|dbj|BAC70174.1| putative SOS regulatory protein LexA [Streptomyces avermitilis
MA-4680]
Length=259
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/212 (70%), Positives = 180/212 (85%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 51 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 110
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D ++ T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 111 RPRAYEVRGSDQSSSVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 167
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 168 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 227
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A+ PIPG++AT+LGKVV V+R+V
Sbjct 228 HVWLLPHNSAYQPIPGDEATILGKVVAVLRRV 259
>gi|300784298|ref|YP_003764589.1| LexA family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299793812|gb|ADJ44187.1| LexA family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340525718|gb|AEK40923.1| LexA family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=241
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/238 (66%), Positives = 188/238 (79%), Gaps = 4/238 (1%)
Query 2 NDSNDTSVAGGAAG---ADSRVLSADSALTERQRTILDVIRASVTSRGYPPSIREIGDAV 58
N + TS + G +G A V D LT RQ+ +LDVIR+ V+ GYPPS+REIG+AV
Sbjct 5 NKAGRTSGSPGGSGKVHAMPEVYDVDETLTVRQQQVLDVIRSWVSRFGYPPSVREIGEAV 64
Query 59 GLTSTSSVAHQLRTLERKGYLRRDPNRPRAVNVRGADDAALPPVTEVAGSDALPEPTFVP 118
GLTSTSSV+HQLR L+RKGYLRRD NRPRAV V A D P E+ +P+ +VP
Sbjct 65 GLTSTSSVSHQLRALQRKGYLRRDANRPRAVGVLSATDDN-PMGIEMDQQPVMPKAAYVP 123
Query 119 VLGRIAAGGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQN 178
++GRIAAGGP+LAE+A+EDVFPLPRE+VGEG LFLLKV GDSM++AAI DGDWVVVRQQ
Sbjct 124 LVGRIAAGGPVLAEQAIEDVFPLPREIVGEGELFLLKVTGDSMIDAAITDGDWVVVRQQP 183
Query 179 VADNGDIVAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
ADNG+IVAAMIDGEATVKTFKR GG +WLMPHN A++PIPG+DATVLGKVV V+R++
Sbjct 184 DADNGEIVAAMIDGEATVKTFKRKGGHIWLMPHNEAYEPIPGDDATVLGKVVAVLRRL 241
>gi|329939980|ref|ZP_08289262.1| SOS-response repressor and protease LexA [Streptomyces griseoaurantiacus
M045]
gi|329300806|gb|EGG44702.1| SOS-response repressor and protease LexA [Streptomyces griseoaurantiacus
M045]
Length=234
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/212 (71%), Positives = 181/212 (86%), Gaps = 3/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 26 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 85
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D AA T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 86 RPRAYEVRGSDQAAPVQPTDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 142
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM++GEATVK FKR G
Sbjct 143 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDG 202
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A++PIPG+DAT+LGKVV V+R+V
Sbjct 203 HVWLLPHNSAYEPIPGDDATILGKVVAVLRRV 234
>gi|345009787|ref|YP_004812141.1| SOS-response transcriptional repressor, LexA [Streptomyces violaceusniger
Tu 4113]
gi|344036136|gb|AEM81861.1| SOS-response transcriptional repressor, LexA [Streptomyces violaceusniger
Tu 4113]
Length=267
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/212 (71%), Positives = 180/212 (85%), Gaps = 4/212 (1%)
Query 25 SALTERQRTILDVIRASVTSRGYPPSIREIGDAVGLTSTSSVAHQLRTLERKGYLRRDPN 84
S LT+RQR +++VIR SV RGYPPS+REIG AVGL+STSSVAHQL LERKG+LRRDP+
Sbjct 60 SGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPH 119
Query 85 RPRAVNVRGADDAALPPVTEVAGSDALPEPTFVPVLGRIAAGGPILAEEAVEDVFPLPRE 144
RPRA VRG+D + P T+ AG P ++VP++GRIAAGGPILAEE+VEDVFPLPR+
Sbjct 120 RPRAYEVRGSDQPSAQP-TDTAGK---PAASYVPLVGRIAAGGPILAEESVEDVFPLPRQ 175
Query 145 LVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDIVAAMIDGEATVKTFKRAGG 204
LVG+G LF+LKV+GDSM+EAAICDGDWV VR+Q VA+NGDIVAAM+DGEATVK FKR G
Sbjct 176 LVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDG 235
Query 205 QVWLMPHNPAFDPIPGNDATVLGKVVTVIRKV 236
VWL+PHN A+ PIPG++AT+LGKVV V+R+V
Sbjct 236 HVWLLPHNAAYQPIPGDEATILGKVVAVLRRV 267
Lambda K H
0.316 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 319551017258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40