BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2728c
Length=231
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609865|ref|NP_217244.1| hypothetical protein Rv2728c [Mycob... 439 1e-121
gi|289448383|ref|ZP_06438127.1| conserved alanine rich protein [... 439 2e-121
gi|289553488|ref|ZP_06442698.1| conserved alanine rich protein [... 438 3e-121
gi|289762899|ref|ZP_06522277.1| conserved alanine rich protein [... 397 5e-109
gi|15827473|ref|NP_301736.1| hypothetical protein ML0994 [Mycoba... 299 2e-79
gi|240171195|ref|ZP_04749854.1| hypothetical protein MkanA1_1792... 291 4e-77
gi|342858405|ref|ZP_08715060.1| hypothetical protein MCOL_06006 ... 286 1e-75
gi|296171781|ref|ZP_06852916.1| conserved hypothetical protein [... 279 2e-73
gi|183981999|ref|YP_001850290.1| hypothetical protein MMAR_1985 ... 278 5e-73
gi|118618690|ref|YP_907022.1| hypothetical protein MUL_3371 [Myc... 275 5e-72
gi|120403423|ref|YP_953252.1| hypothetical protein Mvan_2433 [My... 263 2e-68
gi|108799128|ref|YP_639325.1| hypothetical protein Mmcs_2161 [My... 262 2e-68
gi|145224544|ref|YP_001135222.1| hypothetical protein Mflv_3963 ... 256 2e-66
gi|315444875|ref|YP_004077754.1| hypothetical protein Mspyr1_330... 254 6e-66
gi|41408940|ref|NP_961776.1| hypothetical protein MAP2842c [Myco... 235 5e-60
gi|118466091|ref|YP_882798.1| hypothetical protein MAV_3621 [Myc... 230 1e-58
gi|254776060|ref|ZP_05217576.1| hypothetical protein MaviaA2_155... 219 3e-55
gi|118468888|ref|YP_887066.1| hypothetical protein MSMEG_2733 [M... 215 4e-54
gi|333991110|ref|YP_004523724.1| hypothetical protein JDM601_247... 198 5e-49
gi|336458911|gb|EGO37867.1| hypothetical protein MAPs_08350 [Myc... 194 1e-47
gi|289570904|ref|ZP_06451131.1| conserved alanine rich protein [... 192 3e-47
gi|169630128|ref|YP_001703777.1| hypothetical protein MAB_3045c ... 188 5e-46
gi|333919381|ref|YP_004492962.1| hypothetical protein AS9A_1713 ... 165 5e-39
gi|226366169|ref|YP_002783952.1| hypothetical protein ROP_67600 ... 160 1e-37
gi|111023732|ref|YP_706704.1| hypothetical protein RHA1_ro06774 ... 157 8e-37
gi|229490778|ref|ZP_04384613.1| conserved hypothetical protein [... 148 5e-34
gi|226306249|ref|YP_002766209.1| hypothetical protein RER_27620 ... 141 9e-32
gi|312139391|ref|YP_004006727.1| hypothetical protein REQ_19800 ... 133 3e-29
gi|54025802|ref|YP_120044.1| hypothetical protein nfa38320 [Noca... 127 1e-27
gi|254821031|ref|ZP_05226032.1| hypothetical alanine rich protei... 119 3e-25
gi|325672728|ref|ZP_08152424.1| hypothetical protein HMPREF0724_... 117 1e-24
gi|291004248|ref|ZP_06562221.1| hypothetical protein SeryN2_0699... 97.8 1e-18
gi|296269112|ref|YP_003651744.1| hypothetical protein Tbis_1129 ... 94.7 8e-18
gi|262202145|ref|YP_003273353.1| hypothetical protein Gbro_2212 ... 92.8 4e-17
gi|159037040|ref|YP_001536293.1| hypothetical protein Sare_1402 ... 90.9 1e-16
gi|331695955|ref|YP_004332194.1| hypothetical protein Psed_2116 ... 88.6 7e-16
gi|326384490|ref|ZP_08206170.1| hypothetical protein SCNU_16199 ... 84.3 1e-14
gi|257056742|ref|YP_003134574.1| hypothetical protein Svir_27660... 81.6 8e-14
gi|284033053|ref|YP_003382984.1| hypothetical protein Kfla_5170 ... 81.6 9e-14
gi|296139511|ref|YP_003646754.1| hypothetical protein Tpau_1797 ... 81.6 9e-14
gi|271963755|ref|YP_003337951.1| hypothetical protein Sros_2226 ... 80.1 3e-13
gi|256375578|ref|YP_003099238.1| hypothetical protein Amir_1441 ... 79.0 5e-13
gi|302522288|ref|ZP_07274630.1| conserved hypothetical protein [... 78.6 7e-13
gi|297156735|gb|ADI06447.1| hypothetical protein SBI_03326 [Stre... 78.6 8e-13
gi|343927000|ref|ZP_08766488.1| hypothetical protein GOALK_077_0... 74.7 9e-12
gi|320008157|gb|ADW03007.1| hypothetical protein Sfla_1569 [Stre... 73.6 2e-11
gi|134098333|ref|YP_001103994.1| hypothetical protein SACE_1751 ... 72.0 7e-11
gi|145593991|ref|YP_001158288.1| hypothetical protein Strop_1444... 70.9 2e-10
gi|311742263|ref|ZP_07716072.1| conserved hypothetical protein [... 70.1 2e-10
gi|326443849|ref|ZP_08218583.1| hypothetical protein SclaA2_2241... 68.9 6e-10
>gi|15609865|ref|NP_217244.1| hypothetical protein Rv2728c [Mycobacterium tuberculosis H37Rv]
gi|15842266|ref|NP_337303.1| hypothetical protein MT2800 [Mycobacterium tuberculosis CDC1551]
gi|31793900|ref|NP_856393.1| hypothetical protein Mb2747c [Mycobacterium bovis AF2122/97]
68 more sequence titles
Length=231
Score = 439 bits (1129), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 230/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD
Sbjct 1 MLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS
Sbjct 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD
Sbjct 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP
Sbjct 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
>gi|289448383|ref|ZP_06438127.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
gi|289421341|gb|EFD18542.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
Length=231
Score = 439 bits (1128), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 229/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAIGIVPSAPVLVPELAGAAAAELADLGAA+IAAASLLPKSWIAVGTGRADDVVRPTD
Sbjct 1 MLSAIGIVPSAPVLVPELAGAAAAELADLGAAMIAAASLLPKSWIAVGTGRADDVVRPTD 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS
Sbjct 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD
Sbjct 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP
Sbjct 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
>gi|289553488|ref|ZP_06442698.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN
605]
gi|298526197|ref|ZP_07013606.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|289438120|gb|EFD20613.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN
605]
gi|298495991|gb|EFI31285.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|323718721|gb|EGB27883.1| alanine rich protein [Mycobacterium tuberculosis CDC1551A]
gi|328457964|gb|AEB03387.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN
4207]
Length=230
Score = 438 bits (1127), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 229/230 (99%), Positives = 230/230 (100%), Gaps = 0/230 (0%)
Query 2 LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDV 61
+SAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDV
Sbjct 1 MSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDV 60
Query 62 GTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGSD 121
GTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGSD
Sbjct 61 GTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGSD 120
Query 122 AAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDL 181
AAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDL
Sbjct 121 AAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDL 180
Query 182 AVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
AVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP
Sbjct 181 AVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 230
>gi|289762899|ref|ZP_06522277.1| conserved alanine rich protein [Mycobacterium tuberculosis GM
1503]
gi|289710405|gb|EFD74421.1| conserved alanine rich protein [Mycobacterium tuberculosis GM
1503]
Length=206
Score = 397 bits (1021), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 205/206 (99%), Positives = 206/206 (100%), Gaps = 0/206 (0%)
Query 26 LADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDVGTFAGFGADVRVGLAPQDGDGVAV 85
+ADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDVGTFAGFGADVRVGLAPQDGDGVAV
Sbjct 1 MADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDVGTFAGFGADVRVGLAPQDGDGVAV 60
Query 86 PVELPLCALLTAWVRGQARPEARAQVHVYASDHGSDAAVARGRQLRADIDREPDPIGVLV 145
PVELPLCALLTAWVRGQARPEARAQVHVYASDHGSDAAVARGRQLRADIDREPDPIGVLV
Sbjct 61 PVELPLCALLTAWVRGQARPEARAQVHVYASDHGSDAAVARGRQLRADIDREPDPIGVLV 120
Query 146 VADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAE 205
VADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAE
Sbjct 121 VADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAE 180
Query 206 PGPRSAKEFYRGAPHGVGYFAGVWQP 231
PGPRSAKEFYRGAPHGVGYFAGVWQP
Sbjct 181 PGPRSAKEFYRGAPHGVGYFAGVWQP 206
>gi|15827473|ref|NP_301736.1| hypothetical protein ML0994 [Mycobacterium leprae TN]
gi|221229950|ref|YP_002503366.1| hypothetical protein MLBr_00994 [Mycobacterium leprae Br4923]
gi|467083|gb|AAA17266.1| B2235_C1_162 [Mycobacterium leprae]
gi|13093023|emb|CAC31375.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933057|emb|CAR71089.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=232
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/232 (69%), Positives = 182/232 (79%), Gaps = 1/232 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI IVPSAPVLVPEL GAAAAE+ADL +AV+A A+ LP WI VGTGRADDVV P
Sbjct 1 MLSAIAIVPSAPVLVPELTGAAAAEVADLRSAVLAVAACLPPCWIVVGTGRADDVVGPGG 60
Query 61 -VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHG 119
+GTFAGFGADVRV L+PQ G + V+ P+CAL+ AWVRGQ++ +A AQV VY DH
Sbjct 61 CLGTFAGFGADVRVRLSPQVGGEAELLVDFPVCALIAAWVRGQSQLDASAQVRVYCGDHD 120
Query 120 SDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASG 179
D A+A GRQLR +I++ PDPIGVLVVADG TLT +PGGYDP A + LDDALASG
Sbjct 121 PDMALACGRQLRVEIEQAPDPIGVLVVADGATTLTSSSPGGYDPSAADAELVLDDALASG 180
Query 180 DLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
D+A LTRL Q+ GRVAFQVLAGL EPGPR AKE YRGAP+GVGYF GVWQP
Sbjct 181 DVAALTRLSCQISGRVAFQVLAGLVEPGPRLAKELYRGAPYGVGYFVGVWQP 232
>gi|240171195|ref|ZP_04749854.1| hypothetical protein MkanA1_17921 [Mycobacterium kansasii ATCC
12478]
Length=231
Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/231 (71%), Positives = 185/231 (81%), Gaps = 0/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+L AI IVPSAPVLV ELAG AA E+AD+ AAV AAA++LP W+AVG G AD VV
Sbjct 1 MLGAIAIVPSAPVLVTELAGTAADEVADIRAAVTAAAAMLPPRWVAVGIGPADGVVDRDA 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFG DVRV L+P D P +LPLCAL+TAWVRG+ARPEA AQV VYA DH
Sbjct 61 VGTFAGFGTDVRVRLSPLGADEPGSPADLPLCALMTAWVRGRARPEAAAQVRVYAGDHDV 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
DAA+ARGR LRA+IDR PDPIGVLVVADG+NTLTP+APGGYDP GA +Q ALDDALA+GD
Sbjct 121 DAALARGRDLRAEIDRLPDPIGVLVVADGVNTLTPQAPGGYDPGGADVQLALDDALAAGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+A L+ LP +VLGR AFQVLAGL GP+SAKE YRGAP+GVGYF GVW P
Sbjct 181 VATLSTLPPRVLGRAAFQVLAGLTGAGPQSAKELYRGAPYGVGYFVGVWLP 231
>gi|342858405|ref|ZP_08715060.1| hypothetical protein MCOL_06006 [Mycobacterium colombiense CECT
3035]
gi|342134109|gb|EGT87289.1| hypothetical protein MCOL_06006 [Mycobacterium colombiense CECT
3035]
Length=230
Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/230 (72%), Positives = 183/230 (80%), Gaps = 1/230 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI IVPSAPVLVPELAG AA E+ADL A +AAA+LLP W+ VGTG DDV+ P
Sbjct 1 MLSAIAIVPSAPVLVPELAGTAATEVADLAGATLAAAALLPDRWVVVGTGPDDDVLGPDT 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFGADVRV L+PQ D A P LP+CALL WVRGQA+P A AQ+ VY +DH +
Sbjct 61 VGTFAGFGADVRVRLSPQ-ADEAAPPPALPVCALLAGWVRGQAQPHASAQIRVYRADHDA 119
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
A+ G QLRA+IDR +P+GVLVVADG NTLTP APGGYDPD A QRALDDALA+GD
Sbjct 120 GTALGLGAQLRAEIDRLAEPVGVLVVADGANTLTPAAPGGYDPDNADAQRALDDALAAGD 179
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
+A L RLP Q+LGRVAFQVLAGLAEPGPRSAKE YRGAP GVGYFAG WQ
Sbjct 180 IAALRRLPRQILGRVAFQVLAGLAEPGPRSAKELYRGAPFGVGYFAGAWQ 229
>gi|296171781|ref|ZP_06852916.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295893971|gb|EFG73737.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=229
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/230 (69%), Positives = 181/230 (79%), Gaps = 2/230 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LS I I+PSAP+LVPELAGAAAAE+ DL AV+AAA+LLP WI VG G DDV+ P
Sbjct 1 MLSGIAIIPSAPLLVPELAGAAAAEVTDLAGAVLAAAALLPARWIVVGVGERDDVLGPDT 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
GTFAGFG DVRV L+P DG P +LPLCAL+ AWVRGQ RPEA AQ +Y++DH +
Sbjct 61 AGTFAGFGVDVRVRLSPGVDDGP--PADLPLCALVAAWVRGQVRPEASAQARLYSADHDA 118
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
A+A GR+LRA++D P+P GVLVVADG NTLTP APGG+DP A Q ALDDALA+GD
Sbjct 119 ATALALGRRLRAELDGSPEPTGVLVVADGANTLTPAAPGGHDPGNAEAQLALDDALATGD 178
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
LA L RLP Q+LGRVAFQVLAGL EPGPRSAKE YRGAP+GVGYFAG WQ
Sbjct 179 LAALARLPGQILGRVAFQVLAGLGEPGPRSAKELYRGAPYGVGYFAGAWQ 228
>gi|183981999|ref|YP_001850290.1| hypothetical protein MMAR_1985 [Mycobacterium marinum M]
gi|183175325|gb|ACC40435.1| conserved protein [Mycobacterium marinum M]
Length=231
Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/231 (65%), Positives = 171/231 (75%), Gaps = 0/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI I+PSAPVLVPEL G A AE+ADL +AV+AAAS LP W+ +G G D V P
Sbjct 1 MLSAIAIIPSAPVLVPELTGLAGAEVADLRSAVVAAASSLPNHWVGIGVGPEDQVAGPDA 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFG DV+V LAP G+ P +LPLCALL WVRGQ RP A A++ VYA S
Sbjct 61 VGTFAGFGVDVQVRLAPALGEQPGPPSDLPLCALLAGWVRGQVRPAATAKIQVYAHGRES 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
+ A+ +G+ LRA+IDR DP+GVLVVADG+NTLTP APGGYDP GA Q LDDALA GD
Sbjct 121 EDALVQGKLLRAEIDRTADPVGVLVVADGVNTLTPSAPGGYDPTGAPAQLLLDDALAGGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+A L RLP +VLGR AFQVLAGL GPRSA E YRGAP GVG F GVWQP
Sbjct 181 VAALARLPERVLGRPAFQVLAGLCGAGPRSATELYRGAPFGVGCFVGVWQP 231
>gi|118618690|ref|YP_907022.1| hypothetical protein MUL_3371 [Mycobacterium ulcerans Agy99]
gi|118570800|gb|ABL05551.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=231
Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/231 (65%), Positives = 169/231 (74%), Gaps = 0/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI I+PSAPVLVPEL G A AE+ADL +AV+AA S LP W+ +G D V P
Sbjct 1 MLSAIAIIPSAPVLVPELTGLAGAEVADLRSAVVAAVSSLPNHWVGIGVDPEDQVAGPEA 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAGFG DV+V LAP G+ P +LPLCALL WVRGQ RP A A++ VYA S
Sbjct 61 VGTFAGFGVDVQVRLAPALGEQPGPPSDLPLCALLAGWVRGQVRPAATAKIQVYAHGRES 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
+ A+ +G+ LRA+IDR DP+GVLVVADG+NTLTP APGGYDP GA Q LDDALA GD
Sbjct 121 EDALVQGKLLRAEIDRTADPVGVLVVADGVNTLTPSAPGGYDPTGAPAQLLLDDALAGGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+A L RLP +VLGR AFQVLAGL GPRSA E YRGAP GVG F GVWQP
Sbjct 181 VAALARLPERVLGRPAFQVLAGLCGAGPRSATELYRGAPFGVGCFVGVWQP 231
>gi|120403423|ref|YP_953252.1| hypothetical protein Mvan_2433 [Mycobacterium vanbaalenii PYR-1]
gi|119956241|gb|ABM13246.1| conserved hypothetical alanine rich protein [Mycobacterium vanbaalenii
PYR-1]
Length=231
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/231 (65%), Positives = 173/231 (75%), Gaps = 3/231 (1%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI IVPSAPV+VP LA +AAAE DL AA ++AA+ LP+ WIAVG AD V P
Sbjct 4 MLSAIVIVPSAPVMVPVLASSAAAETEDLRAAAVSAAAQLPRRWIAVGVAAADGVHGPES 63
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAG+G DVRVGL+ G G P LPLCAL+TAW+RG ARP+A A+V D
Sbjct 64 VGTFAGYGVDVRVGLS---GPGSGEPTALPLCALITAWLRGLARPQAVAEVWACRGDQEP 120
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
AA GR+LRA +D P+ +GVLVVADG NTLTP APGG+DPD +Q ALDDALA+GD
Sbjct 121 GAAADLGRRLRAQLDAAPEEVGVLVVADGANTLTPAAPGGHDPDSPRVQAALDDALATGD 180
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
A L RLP+ VLGRVA+QVLAGLAEPGPRSAKE YRGAP+GVGYF GVW P
Sbjct 181 TAALMRLPSTVLGRVAYQVLAGLAEPGPRSAKELYRGAPYGVGYFVGVWTP 231
>gi|108799128|ref|YP_639325.1| hypothetical protein Mmcs_2161 [Mycobacterium sp. MCS]
gi|119868243|ref|YP_938195.1| hypothetical protein Mkms_2207 [Mycobacterium sp. KMS]
gi|126434734|ref|YP_001070425.1| hypothetical protein Mjls_2148 [Mycobacterium sp. JLS]
gi|108769547|gb|ABG08269.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
MCS]
gi|119694332|gb|ABL91405.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
KMS]
gi|126234534|gb|ABN97934.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
JLS]
Length=228
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/231 (62%), Positives = 170/231 (74%), Gaps = 3/231 (1%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+L+AI +VPSAPV+VPELAG AA ELADL AAV LP WIA+G G D+V+ P
Sbjct 1 MLTAIALVPSAPVMVPELAGGAAGELADLRAAVARCVEGLPDRWIAIGVGAVDEVLTPPK 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
VGTFAG+G DVRV L+P D A PVELPLCAL+TAW RG+ P A A+V V++ D +
Sbjct 61 VGTFAGYGVDVRVALSP---DADAAPVELPLCALITAWARGEYAPRAAAEVRVFSGDLAA 117
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
D A RGR+LRA +D P+GVLVVADG +TLTP APGGYDPD +Q LD+ALA+GD
Sbjct 118 DTAHTRGRELRALLDDADGPVGVLVVADGCHTLTPPAPGGYDPDSVAVQAQLDEALAAGD 177
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
A L+RLP V+GRVA+QVLAGL P +A+EFYRGAP+GVGYFAG W P
Sbjct 178 PAALSRLPDSVVGRVAYQVLAGLTGPASGAAEEFYRGAPYGVGYFAGRWTP 228
>gi|145224544|ref|YP_001135222.1| hypothetical protein Mflv_3963 [Mycobacterium gilvum PYR-GCK]
gi|145217030|gb|ABP46434.1| conserved hypothetical alanine rich protein [Mycobacterium gilvum
PYR-GCK]
Length=232
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/231 (60%), Positives = 163/231 (71%), Gaps = 2/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
VLSA+ IVPSAPV+VPELA AAAE ADL AA + A LP WIA+G D V P
Sbjct 4 VLSALAIVPSAPVMVPELASGAAAETADLRAAALEAVRGLPARWIAIGVAEQDGVYGPDR 63
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
GTF G+G D+RV L+P+ + P LPLCAL+ W+RGQARP+AR + Y ++H
Sbjct 64 AGTFGGYGVDIRVALSPEAT--TSAPTALPLCALICGWLRGQARPDARVEARAYRAEHAG 121
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
A+ G +LR ID + IGV++VADG NTLTP APGGYD D +Q ALDDALA+GD
Sbjct 122 PVALGFGARLREQIDADAADIGVVIVADGANTLTPAAPGGYDEDSPTVQSALDDALAAGD 181
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
A LTRLP+ VLGRVA+QVLAGLA GPR+A E YRGAP+GVGYFAGVW P
Sbjct 182 CAALTRLPSGVLGRVAYQVLAGLAGTGPRTAAELYRGAPYGVGYFAGVWTP 232
>gi|315444875|ref|YP_004077754.1| hypothetical protein Mspyr1_33080 [Mycobacterium sp. Spyr1]
gi|315263178|gb|ADT99919.1| hypothetical protein Mspyr1_33080 [Mycobacterium sp. Spyr1]
Length=229
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/231 (59%), Positives = 162/231 (71%), Gaps = 2/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSA+ IVPSAPV+VPELA AAAE ADL AA + A LP WIA+G D V P
Sbjct 1 MLSALAIVPSAPVMVPELASGAAAETADLRAAALEAVRGLPARWIAIGVAEQDGVYGPDR 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
GTF G+G D+RV L+P+ + P LPLCAL+ W+RGQARP+AR + Y ++H
Sbjct 61 AGTFGGYGVDIRVALSPEAT--TSAPTALPLCALICGWLRGQARPDARVETRAYRAEHAG 118
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
A+ G +LR ID + IGV++VADG NTLTP APGGYD D +Q ALDDALA+GD
Sbjct 119 PVALGFGARLREQIDADAADIGVVIVADGANTLTPAAPGGYDEDSPAVQSALDDALAAGD 178
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
A LTRLP+ VLGRV +QVLAGLA GPR+A E YRGAP+GVGYFAGVW P
Sbjct 179 CAALTRLPSGVLGRVGYQVLAGLAGTGPRTAAELYRGAPYGVGYFAGVWTP 229
>gi|41408940|ref|NP_961776.1| hypothetical protein MAP2842c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397299|gb|AAS05159.1| hypothetical protein MAP_2842c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=232
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 153/231 (67%), Positives = 177/231 (77%), Gaps = 1/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LS I IVPSAPVLVPELAG AA ELA+L AA +AAA+LLP W+ +GTG AD +
Sbjct 1 MLSVIAIVPSAPVLVPELAGTAADELAELSAATLAAAALLPDRWLIIGTGAADQELGDDA 60
Query 61 VGTFAGFGADVRVGLAP-QDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHG 119
VGTFAGFG DV V L+P DG P LPLCALL W+RGQ +P+A A+ +Y +DH
Sbjct 61 VGTFAGFGMDVPVRLSPPADGRAETAPAALPLCALLGGWLRGQVQPQAAARARIYRADHD 120
Query 120 SDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASG 179
+D AV RGRQLRA++D P+P+GVLVVADG NTLTP APGG+ P A Q+ALDDALA G
Sbjct 121 ADTAVRRGRQLRAELDALPEPVGVLVVADGANTLTPAAPGGHHPGDAAAQQALDDALAGG 180
Query 180 DLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
D+A L RLP Q+LGRVAF VLAGLAEPGPRSAKE YRGAP+GVGYFAG WQ
Sbjct 181 DIAALRRLPGQILGRVAFGVLAGLAEPGPRSAKELYRGAPYGVGYFAGAWQ 231
>gi|118466091|ref|YP_882798.1| hypothetical protein MAV_3621 [Mycobacterium avium 104]
gi|118167378|gb|ABK68275.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=232
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/231 (66%), Positives = 175/231 (76%), Gaps = 1/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LS I IVPSAPVLVPELAG AA ELA+L AA +AAA+LLP W+ VGTG AD +
Sbjct 1 MLSVIAIVPSAPVLVPELAGTAADELAELSAATLAAAALLPDRWLIVGTGAADQELGDDA 60
Query 61 VGTFAGFGADVRVGLAP-QDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHG 119
VGTFAGFG DV V L+P DG P LPLC LL W+RGQ +P A A+ +Y +D+
Sbjct 61 VGTFAGFGMDVPVRLSPPADGRAETAPAALPLCVLLGGWLRGQVQPRAAARARIYRADYD 120
Query 120 SDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASG 179
+D AV RGRQLRA++D P+P+GVLVVADG NTLTP APGG+ P A Q+ALDDALA G
Sbjct 121 ADTAVRRGRQLRAELDALPEPVGVLVVADGANTLTPAAPGGHHPGDAAAQQALDDALAGG 180
Query 180 DLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
D+A L RLP Q+LGRVAF VLAGLAEPGPRSAKE YRGAP+GVGYFAG WQ
Sbjct 181 DIAALRRLPGQILGRVAFGVLAGLAEPGPRSAKELYRGAPYGVGYFAGAWQ 231
>gi|254776060|ref|ZP_05217576.1| hypothetical protein MaviaA2_15510 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=232
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/231 (67%), Positives = 175/231 (76%), Gaps = 1/231 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LS I IVPSAPVLVPELAG AA ELA+L AA +AAA+LLP W+ VGTG AD +
Sbjct 1 MLSVIAIVPSAPVLVPELAGTAADELAELSAATLAAAALLPDRWLIVGTGAADQELGDDA 60
Query 61 VGTFAGFGADVRVGLAP-QDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHG 119
VGTFAGFG DV V L+P DG A P LPLC LL W+R Q +P A A+ +Y +DH
Sbjct 61 VGTFAGFGMDVPVRLSPPADGRAEAAPAALPLCVLLGGWLRRQVQPRAAARARIYRADHD 120
Query 120 SDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASG 179
+D AV RGRQLRA++D P+P+GVLVVADG NTLTP APGG+ P A Q+ALDDALA G
Sbjct 121 ADTAVRRGRQLRAELDALPEPVGVLVVADGANTLTPAAPGGHHPGDAAAQQALDDALAGG 180
Query 180 DLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
D+A L RLP Q+LGRVAF VLAGLAEPGPRSAKE YRGAP+GVGYFAG WQ
Sbjct 181 DIAALRRLPGQILGRVAFGVLAGLAEPGPRSAKELYRGAPYGVGYFAGAWQ 231
>gi|118468888|ref|YP_887066.1| hypothetical protein MSMEG_2733 [Mycobacterium smegmatis str.
MC2 155]
gi|118170175|gb|ABK71071.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=228
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/231 (57%), Positives = 157/231 (68%), Gaps = 3/231 (1%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAI IVP+AP+LVPEL GAAAAE+A L A +AAA+ LP W++VGTG AD P
Sbjct 1 MLSAIAIVPAAPLLVPELMGAAAAEMAPLRDAALAAAAELPARWVSVGTGAADATFGPDQ 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
GTFAG+GA V V L P PVELPL AL+ W+RG+ P+A VYA+ +
Sbjct 61 CGTFAGYGAAVPVTLGPVTN---ITPVELPLSALVAGWLRGRVAPQAVVDARVYAAATPA 117
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
AV GR LR +ID +P+GVLVVADG +TL+P APGGY P+ Q ALD+ALASGD
Sbjct 118 GDAVEIGRGLRTEIDATAEPVGVLVVADGAHTLSPSAPGGYRPESVAAQHALDEALASGD 177
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
A L LP +GRVA +VLAGLA PR+A+E YRG P+GVGYF GVW P
Sbjct 178 AAALASLPDVSVGRVAHEVLAGLAGAAPRTARELYRGVPYGVGYFVGVWVP 228
>gi|333991110|ref|YP_004523724.1| hypothetical protein JDM601_2470 [Mycobacterium sp. JDM601]
gi|333487078|gb|AEF36470.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=222
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/231 (53%), Positives = 152/231 (66%), Gaps = 9/231 (3%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+L I I+PSAPVLVPELAG+A AA+ AA L P+ W+A+G G A+ P
Sbjct 1 MLGPIAIIPSAPVLVPELAGSAPEAAELRAAALAAAEVLPPR-WVALGAG-AEGTWGPDS 58
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGS 120
G+FAG+G +V VGL+P G +LPLCAL+ W+ Q RP+ VH +
Sbjct 59 AGSFAGYGTEVSVGLSP----GATRSADLPLCALVAGWISAQLRPDGEVAVHAHTD---P 111
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
DAA+A GR+LRADI++ +PIGVLV+ADG NTLT APGG+ P +QRALDDALA GD
Sbjct 112 DAALAAGRRLRADIEQSGEPIGVLVLADGANTLTAAAPGGHHPADVDVQRALDDALAGGD 171
Query 181 LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+A L LP QV+GR AF LAGL PRSA + YR AP+GVGYF GVW+P
Sbjct 172 VAGLVGLPPQVVGRAAFAALAGLVGHRPRSATQLYRDAPYGVGYFVGVWEP 222
>gi|336458911|gb|EGO37867.1| hypothetical protein MAPs_08350 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=181
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/180 (66%), Positives = 136/180 (76%), Gaps = 1/180 (0%)
Query 52 ADDVVRPTDVGTFAGFGADVRVGLAP-QDGDGVAVPVELPLCALLTAWVRGQARPEARAQ 110
AD + VGTFAGFG DV V L+P DG P LPLCALL W+RGQ +P+A A+
Sbjct 1 ADQELGDDAVGTFAGFGMDVPVRLSPPADGRAETAPAALPLCALLGGWLRGQVQPQAAAR 60
Query 111 VHVYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQR 170
+Y +DH +D AV RGRQLRA++D P+P+GVLVVADG NTLTP APGG+ P A Q+
Sbjct 61 ARIYRADHDADTAVRRGRQLRAELDALPEPVGVLVVADGANTLTPAAPGGHHPGDAAAQQ 120
Query 171 ALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
ALDDALA GD+A L RLP Q+LGRVAF VLAGLAEPGPRSAKE YRGAP+GVGYFAG WQ
Sbjct 121 ALDDALAGGDIAALRRLPGQILGRVAFGVLAGLAEPGPRSAKELYRGAPYGVGYFAGAWQ 180
>gi|289570904|ref|ZP_06451131.1| conserved alanine rich protein [Mycobacterium tuberculosis T17]
gi|289544658|gb|EFD48306.1| conserved alanine rich protein [Mycobacterium tuberculosis T17]
Length=105
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/104 (99%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
+LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD
Sbjct 1 MLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTD 60
Query 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQAR 104
VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQAR
Sbjct 61 VGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQAR 104
>gi|169630128|ref|YP_001703777.1| hypothetical protein MAB_3045c [Mycobacterium abscessus ATCC
19977]
gi|169242095|emb|CAM63123.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=222
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 143/228 (63%), Gaps = 12/228 (5%)
Query 4 AIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSWIAVGTGRADDVVRPTDVGT 63
+I I PS P+LVPEL G AAAE +L AA + A LP WIA+G G D GT
Sbjct 4 SIAICPSTPLLVPELGGEAAAETGELRAASVTVARSLPAQWIAIGVG--DGQYHADMSGT 61
Query 64 FAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARP-EARAQVHVYASDHGSDA 122
FAG+GADVRV L+ D + P +LPL L+ W+R +A EA ++ A+D
Sbjct 62 FAGYGADVRVSLS----DRMGKPAQLPLPVLIAGWLRSRAEADEAEVRLVGPATD----- 112
Query 123 AVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDLA 182
A+A GR LR +I+R P P GVL+VADG NTLT +APGGY PD QRA+ DAL GD A
Sbjct 113 ALAFGRALRGEIERRPVPPGVLIVADGANTLTDKAPGGYRPDAEAAQRAVVDALTRGDAA 172
Query 183 VLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
L LP + GR A+QVLAGL + A+ YRG+P+GVGYFAG+W+
Sbjct 173 SLRHLPDAITGRPAYQVLAGLVDSDVVEARCLYRGSPYGVGYFAGIWR 220
>gi|333919381|ref|YP_004492962.1| hypothetical protein AS9A_1713 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481602|gb|AEF40162.1| hypothetical protein AS9A_1713 [Amycolicicoccus subflavus DQS3-9A1]
Length=239
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/244 (43%), Positives = 143/244 (59%), Gaps = 18/244 (7%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKS---WIAVGTGRADDVVR 57
+ +A +P P+LVPELA AA+E ADL AV+ AAS L ++ WIAVGT +
Sbjct 1 MFTAAAFIPGPPLLVPELANEAASETADLRRAVLDAASALAETCDQWIAVGTDTSALRNA 60
Query 58 PTDVGTFAGFGADVRVGLAPQ-DGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYAS 116
+ GTF GFG DV V L P+ DG ++ ++PL AL+ AWVRGQ+ P R ++
Sbjct 61 SNESGTFRGFGVDVMVSLGPEPDG---SIDADMPLPALIAAWVRGQSAPAQRCELEYLQP 117
Query 117 DHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDAL 176
D + +A++RG QLR +D P+ +G L+VADG TLT RAPG +DP +R L +AL
Sbjct 118 DTPAASALSRGEQLRRQLDAVPERVGALIVADGATTLTDRAPGAFDPRAEEFERTLSEAL 177
Query 177 ASGDLAVLTRLPAQ------VLGRVAFQVLAGL---AEPGPRSAKEFYRGAPHGVGYFAG 227
SG+ +L L Q V R A+QVLA L +PG + + + AP+GVGY G
Sbjct 178 DSGETGILATLDVQLCCELGVTARAAWQVLASLFTGTKPGRVTHR--FDSAPYGVGYHVG 235
Query 228 VWQP 231
+W P
Sbjct 236 MWLP 239
>gi|226366169|ref|YP_002783952.1| hypothetical protein ROP_67600 [Rhodococcus opacus B4]
gi|226244659|dbj|BAH55007.1| hypothetical protein [Rhodococcus opacus B4]
Length=238
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/240 (45%), Positives = 140/240 (59%), Gaps = 11/240 (4%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAA---SLLPKSWIAVGTGRADDVVR 57
+ +A +VPS P+LVPEL GAAAAE A L AV +AA S + W+AVG VR
Sbjct 1 MFTAAILVPSPPLLVPELTGAAAAETAPLRDAVQSAAKALSAIATEWVAVGAAPTAVDVR 60
Query 58 PTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASD 117
GT+ G+G DVRV L P G +LPL AL W+RG P+A + A+D
Sbjct 61 DDAQGTYRGYGVDVRVTLRP--GPAGEPDPDLPLAALTAGWIRGTCAPDAVVDARILAAD 118
Query 118 HGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALA 177
A G +LRA +DR+P+P G+L+VADG NTLT +APG +DP G+Q +D AL
Sbjct 119 LPPRQCAAYGAELRAFLDRDPEPRGLLIVADGANTLTAKAPGAFDPRAEGVQARVDAALD 178
Query 178 SGDLAVLTRL-PAQ-----VLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+GD L L PA+ + GRV +QVLAG+ + P S + Y AP+GVGY G W+P
Sbjct 179 TGDRDALLALDPAECAVLGIGGRVPWQVLAGVFDAPPASCRTLYSAAPYGVGYHVGEWRP 238
>gi|111023732|ref|YP_706704.1| hypothetical protein RHA1_ro06774 [Rhodococcus jostii RHA1]
gi|110823262|gb|ABG98546.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=238
Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/240 (45%), Positives = 141/240 (59%), Gaps = 11/240 (4%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAA---SLLPKSWIAVGTGRADDVVR 57
+ +A +VPS P+LVPEL GAAAAE A L AV AA S L W+AVG A VR
Sbjct 1 MFTAAILVPSPPLLVPELTGAAAAETAPLRDAVQTAAKALSALAIEWVAVGAAPAAVEVR 60
Query 58 PTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASD 117
P GT+ G+G DVR+ L P G +LPL AL W+RG P+A + A+D
Sbjct 61 PDAQGTYRGYGVDVRIALRP--GPAGDPDPDLPLAALTAGWIRGTCAPDAVVDARILAAD 118
Query 118 HGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALA 177
+ A G +LR +DR+P+P G+++VADG NTLT +APG +DP G+Q +D AL
Sbjct 119 LSPEQCAAYGAELRTLLDRDPEPRGLVIVADGANTLTAKAPGAFDPRAEGVQARIDAALD 178
Query 178 SGDL-AVLTRLPAQ-----VLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
+GD A+L P + + GRV +QVLAG+ + P S + Y AP+GVGY G W+P
Sbjct 179 TGDRDALLALEPTECESLGICGRVPWQVLAGVFDAPPASCRTLYSAAPYGVGYHVGEWRP 238
>gi|229490778|ref|ZP_04384613.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322168|gb|EEN87954.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=248
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/251 (42%), Positives = 141/251 (57%), Gaps = 23/251 (9%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKS--WIAVGTGR---ADDV 55
+L++ +VPSAP+LVPEL+G +A + AA A + L ++ W+ VG A ++
Sbjct 1 MLTSAVLVPSAPLLVPELSGDSAESVQVRAAATTAVSRLAHEAVHWVGVGVDSEKAAGEL 60
Query 56 VRPT----DVGTFAGFGADVRVGLAPQDGDGVAVPV-ELPLCALLTAWVRGQARPEARAQ 110
R +GTFAGFGADVR L D D PV L LCAL+ W+RG+ E
Sbjct 61 WRSGVGRGQIGTFAGFGADVRTSL---DADAAGEPVPSLELCALVAGWLRGRTDVEITLD 117
Query 111 VHVYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQR 170
+HV ++ ++ G+QLR +D + P G+L+VADG +TLT +APG +D AG+Q
Sbjct 118 MHVVSAKASANECREFGQQLRKQLDSDNRPQGLLIVADGASTLTAKAPGSFDERAAGVQS 177
Query 171 ALDDALASGD----LAVLTRLPAQV--LGRVAFQVLAGLAEPGPRSAKEF----YRGAPH 220
A+DDAL +GD LA+ RL V GR A+QVLAG+ RSA Y AP
Sbjct 178 AIDDALTAGDPEALLALDPRLCRSVGAQGRAAWQVLAGVFTGSSRSAHPRATVDYSDAPF 237
Query 221 GVGYFAGVWQP 231
GVGY G W P
Sbjct 238 GVGYHVGTWWP 248
>gi|226306249|ref|YP_002766209.1| hypothetical protein RER_27620 [Rhodococcus erythropolis PR4]
gi|226185366|dbj|BAH33470.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=252
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/255 (40%), Positives = 136/255 (54%), Gaps = 27/255 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKS--WIAVGTG-------R 51
+L++ +VPSAP+LVPEL+G +A AA A L ++ W+ VG G
Sbjct 1 MLTSAVLVPSAPLLVPELSGDSAESAQVRAAATAAVRRLSHEAVHWVGVGVGPENAEPEN 60
Query 52 ADDVVRPT----DVGTFAGFGADVRVGLAPQDGDGVAVPV-ELPLCALLTAWVRGQARPE 106
A ++ R +GTFAGFGADVR L D D P+ L LCAL+ W+R +A E
Sbjct 61 AGELWRSGVGRGQIGTFAGFGADVRTSL---DADAAGEPLPSLELCALVAGWLRARADVE 117
Query 107 ARAQVHVYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGA 166
+HV ++ + G+QLR +D + P G+L+VADG +TLT +APG +D A
Sbjct 118 ITVDMHVVSAKASVNECREFGQQLRKQLDSDNRPQGLLIVADGASTLTAKAPGSFDERAA 177
Query 167 GMQRALDDALASGDLAVLTRLPAQVL------GRVAFQVLAGLAEPGPRSAKEF----YR 216
G+Q A+DDAL +GD L L Q+ GR A+QVLAG+ RS Y
Sbjct 178 GVQSAIDDALTAGDPEALLALDPQLCRSVGAQGRAAWQVLAGVFMDSSRSTTTRSVVDYS 237
Query 217 GAPHGVGYFAGVWQP 231
AP GV Y G W+P
Sbjct 238 DAPFGVAYHVGTWRP 252
>gi|312139391|ref|YP_004006727.1| hypothetical protein REQ_19800 [Rhodococcus equi 103S]
gi|311888730|emb|CBH48042.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=245
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/247 (42%), Positives = 137/247 (56%), Gaps = 19/247 (7%)
Query 2 LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKS---WIAVGT---GRADDV 55
++A VPS P+LVP+LAGAAA+E L A + A L S W A+G GR
Sbjct 1 MTAAAFVPSPPLLVPQLAGAAASETDRLRRAALDVAGRLADSSVEWTAIGVAEVGRGPAD 60
Query 56 VRPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYA 115
V P GTF GFG D+ V L+ D A ++PL AL+ W+RG+A P R +V A
Sbjct 61 VAPESCGTFRGFGVDLPVSLS--DAPPTAPDPDMPLAALVAGWLRGRAAPSVRVRVRTLA 118
Query 116 SDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDA 175
+D + G +LRA+ D G+LV+ADG NTLT +APG +D A ++ ALD A
Sbjct 119 ADTPAAECTRLGARLRAEFDESTTAQGLLVIADGANTLTDKAPGAFDERSADVEAALDRA 178
Query 176 LASGDLAVLTRLPAQVL------GRVAFQVLAGL-----AEPGPRSAKEFYRGAPHGVGY 224
LA+GD A L L ++ GR A+QVL+G+ P+ A+ Y GAP+GVGY
Sbjct 179 LAAGDPAALAALDPELCAAVGLAGRAAWQVLSGVFGDVTGTGQPQKAESSYSGAPYGVGY 238
Query 225 FAGVWQP 231
G+W P
Sbjct 239 HVGMWLP 245
>gi|54025802|ref|YP_120044.1| hypothetical protein nfa38320 [Nocardia farcinica IFM 10152]
gi|54017310|dbj|BAD58680.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=257
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/249 (42%), Positives = 128/249 (52%), Gaps = 19/249 (7%)
Query 1 VLSAIGIVPSAPVLVPELAGAA--------AAELADLGAAVIAAASLLP--KSWIAVGTG 50
+ + +VPS PVLVPEL G A LA L A +AA L + W +G
Sbjct 1 MFTIAALVPSPPVLVPELCGGQPGLSGDERAEHLARLRTATLAAVGELSGVRDWTVIGVD 60
Query 51 RADDVVRPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQ 110
AD GTF GFGADVR GL+ + DG P L+ W+RG A P A A
Sbjct 61 EADLKAGSDTAGTFRGFGADVRAGLSARALDGEPDPRLPLP-LLIAGWLRGIAAPAASAD 119
Query 111 VHVYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQR 170
+ A+D G QLRAD+D P P GVLVVADG TL+ APG + D +Q+
Sbjct 120 ALLVAADTPPPRCRELGAQLRADLDAAPGPRGVLVVADGACTLSTSAPGYWHEDAPALQQ 179
Query 171 ALDDALASGDLAVLTRLPAQ------VLGRVAFQVLAGLAEPGPR--SAKEFYRGAPHGV 222
LDDAL +GD A L L A + GR A+QVLAGL P + + +YR AP GV
Sbjct 180 RLDDALDAGDRAGLADLDAARCARVGLAGRAAYQVLAGLFAPDAADPAVRTYYRDAPFGV 239
Query 223 GYFAGVWQP 231
GY VW+P
Sbjct 240 GYHVSVWRP 248
>gi|254821031|ref|ZP_05226032.1| hypothetical alanine rich protein [Mycobacterium intracellulare
ATCC 13950]
Length=76
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/74 (80%), Positives = 64/74 (87%), Gaps = 0/74 (0%)
Query 157 APGGYDPDGAGMQRALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYR 216
APGG+ PD A Q AL+DALA GD+A LTRLP Q+LGRVAFQVLAGLAEPGPRSAKE YR
Sbjct 2 APGGHHPDNAPAQEALNDALADGDVAALTRLPPQILGRVAFQVLAGLAEPGPRSAKELYR 61
Query 217 GAPHGVGYFAGVWQ 230
GAP+GVGYFAG WQ
Sbjct 62 GAPYGVGYFAGAWQ 75
>gi|325672728|ref|ZP_08152424.1| hypothetical protein HMPREF0724_10205 [Rhodococcus equi ATCC
33707]
gi|325556605|gb|EGD26271.1| hypothetical protein HMPREF0724_10205 [Rhodococcus equi ATCC
33707]
Length=229
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/231 (41%), Positives = 125/231 (55%), Gaps = 19/231 (8%)
Query 18 LAGAAAAELADLGAAVIAAASLLPKS---WIAVGT---GRADDVVRPTDVGTFAGFGADV 71
+AGAAA+E L A + A L S W A+G GR V P GTF GFG D+
Sbjct 1 MAGAAASETDRLRRAALDVAGRLADSCVEWTAIGVAEVGRGPADVAPESCGTFRGFGVDL 60
Query 72 RVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASDHGSDAAVARGRQLR 131
V L+ D A ++PL AL+ W+RG+A P R +V A+D + G +LR
Sbjct 61 PVSLS--DAPPTAPDPDMPLAALVAGWLRGRAAPSVRVRVRTLAADTPAAECTQLGARLR 118
Query 132 ADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDLAVLTRLPAQV 191
A+ D G+LV+ADG NTLT +APG +D A ++ ALD ALA+GD A L L ++
Sbjct 119 AEFDESTTAQGLLVIADGANTLTDKAPGAFDERSADVEAALDRALAAGDPAALAALDPEL 178
Query 192 L------GRVAFQVLAGL-----AEPGPRSAKEFYRGAPHGVGYFAGVWQP 231
GR A+QVL+G+ PR A+ Y GAP+GVGY G+W P
Sbjct 179 CAAVGLAGRAAWQVLSGVFGDVTGTGKPRKAESSYSGAPYGVGYHVGMWLP 229
>gi|291004248|ref|ZP_06562221.1| hypothetical protein SeryN2_06992 [Saccharopolyspora erythraea
NRRL 2338]
Length=237
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/241 (40%), Positives = 119/241 (50%), Gaps = 17/241 (7%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPK---SWIAVGTGR-ADDVV 56
+++ + +VP P+L+PEL + AE A L A + A S L + W+AVG R V+
Sbjct 1 MITRVAVVPYPPLLIPELTVRSGAETAQLRGACLRAVSSLTEVAAEWVAVGVDRFGPAVL 60
Query 57 RPTDVGTFAGFGADVRVGL-APQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYA 115
P GTFA FG DV V L A Q G A P+ LPL AL+T W+R QA ARA H+ A
Sbjct 61 GPATTGTFASFGVDVPVSLSAAQAPAGGADPL-LPLPALVTGWLRAQAG-AARATAHLLA 118
Query 116 SDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDA 175
D + GR+L A PDP+G+LV+ADG N T R+P + L A
Sbjct 119 PDLDAQRCREYGRELAAG----PDPVGLLVLADGTNCRTERSPNPPHERAEPVDELLRTA 174
Query 176 LASGDLAVLTRLPAQVL------GRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVW 229
LA D L L A V GR A LAG AE G K Y P GV Y VW
Sbjct 175 LAEADADRLLELDATVAAQVGVEGRAALHALAGAAEDGRWRGKLLYSDVPFGVTYHVAVW 234
Query 230 Q 230
Sbjct 235 S 235
>gi|296269112|ref|YP_003651744.1| hypothetical protein Tbis_1129 [Thermobispora bispora DSM 43833]
gi|296091899|gb|ADG87851.1| hypothetical protein Tbis_1129 [Thermobispora bispora DSM 43833]
Length=235
Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/244 (38%), Positives = 117/244 (48%), Gaps = 25/244 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVV 56
+L A + P P++VPELAGAAA EL DL AA +A + L P+ + G G
Sbjct 1 MLIAAAVCPHPPLIVPELAGAAAPELDDLRAACASAITALADARPELLVVTG-GAERTAA 59
Query 57 RPTD-VGTFAGFGADVRVGL-APQDGDGVAVPVELPLCA-LLTAWVRGQARPEARAQVHV 113
P D GT +G DVR G AP +P+ L + LL W R +
Sbjct 60 YPGDAAGTLRPWGVDVRTGTGAP------CLPLSLTIGRWLLDRWRAATGRALPPLRFEA 113
Query 114 YASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALD 173
A D A GR+ I R D + +L + DG LT R+PG PD +
Sbjct 114 VACDAPGPECAALGRR----IARMADRVALLTMGDGSARLTERSPGYVHPDAVPYDDMVA 169
Query 174 DALASGDLAVLTRL-PAQ-----VLGRVAFQVLAGLAEPG-PRSAKEFYRGAPHGVGYFA 226
DALA+ DL L L PA+ V GR AFQVLAG AE PR ++ YR AP+GV YF
Sbjct 170 DALATADLDRLAGLDPARTAELWVGGRAAFQVLAGAAEGAPPRRSELLYRAAPYGVSYFV 229
Query 227 GVWQ 230
W+
Sbjct 230 AQWR 233
>gi|262202145|ref|YP_003273353.1| hypothetical protein Gbro_2212 [Gordonia bronchialis DSM 43247]
gi|262085492|gb|ACY21460.1| hypothetical protein Gbro_2212 [Gordonia bronchialis DSM 43247]
Length=260
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/251 (35%), Positives = 117/251 (47%), Gaps = 27/251 (10%)
Query 3 SAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKS---WIAVGTGRADDVVR-- 57
S + VPSAP+LVP LAG AA + + A ++A + + W+A+G +D+ R
Sbjct 3 SEVVFVPSAPLLVPRLAGPAATDTEPVRDAAVSALRMAAEGIERWVAIGV--SDEAARGR 60
Query 58 --PTDVGTFAGFGADVRVGLAPQDGDGVA-----VPVELPLCALLTAWVRGQARPEARAQ 110
GTFAGFG DV V L DG + +PL L+ W+RGQ R
Sbjct 61 LSTPHTGTFAGFGVDVPVTLDRGRSDGATTTPAPMATPMPLSMLIAGWLRGQVG-VVRMG 119
Query 111 VHVYASDHGSDAAVARGRQLRADID-----REPDPIGVLVVADGLNTLTPRAP-GGYDPD 164
+ D + G +L A+++ E PIGVLVV DG L+ +AP GG
Sbjct 120 AILVGRDTTPEECTRIGTELAAELEIGGPGAEAVPIGVLVVGDGATALSAKAPAGGRRES 179
Query 165 GAGMQRALDDALASGD------LAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGA 218
+Q+ +D A+ D L V V GRVA+QV A L G +A+ Y A
Sbjct 180 AVVLQKVIDQAIGRPDPIGLAELGVADCEAEGVGGRVAWQVAAALCAGGELAARVDYCAA 239
Query 219 PHGVGYFAGVW 229
P GVGY W
Sbjct 240 PFGVGYTVARW 250
>gi|159037040|ref|YP_001536293.1| hypothetical protein Sare_1402 [Salinispora arenicola CNS-205]
gi|157915875|gb|ABV97302.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=268
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/258 (36%), Positives = 116/258 (45%), Gaps = 28/258 (10%)
Query 2 LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVVR 57
L A + P P+LVPE+AGAA AEL DL A A + L P + VG G A
Sbjct 6 LVAAAVCPHPPLLVPEVAGAAVAELDDLRLACDAVVARLLAAEPDRIVLVGGGPATTTFG 65
Query 58 PTDVGTFAGFGADVRVGLAPQDGDGV--------------AVPVELPLCALLTAWVRGQA 103
+ G+ G+G D+RV L+P D V AV LPL L AW+ G++
Sbjct 66 AAEHGSLRGYGVDLRVPLSPAGADAVEAAGADAVGVTGADAVGDALPLSLTLGAWLLGRS 125
Query 104 RPEARAQVHVYASDHGSDAAVARGRQLRA--DIDREPDPIGVLVVADGLNTLTPRAPGGY 161
E A+D +D A G L + D I +LV+ DG R+PG
Sbjct 126 GTELPRSAVAVAADESADRCAALGAGLLSAGRFGGASDRIALLVLGDGSACRGERSPGYD 185
Query 162 DPDGA----GMQRALDDALASGDLAVLTRLPA--QVLGRVAFQVLAGL--AEPGPRSAKE 213
DP + RAL DA A G L + L A + GR ++QVLAG A GP +
Sbjct 186 DPRAEPYDQAVARALADADAGGLLGLDAELSAGLKAAGRASWQVLAGAVRATGGPWHGEL 245
Query 214 FYRGAPHGVGYFAGVWQP 231
Y GAP GV Y W P
Sbjct 246 AYAGAPFGVTYLVASWTP 263
>gi|331695955|ref|YP_004332194.1| hypothetical protein Psed_2116 [Pseudonocardia dioxanivorans
CB1190]
gi|326950644|gb|AEA24341.1| hypothetical protein Psed_2116 [Pseudonocardia dioxanivorans
CB1190]
Length=239
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/245 (38%), Positives = 116/245 (48%), Gaps = 21/245 (8%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADL---GAAVIAAASLLPKSWIAVGTGRA-DDVV 56
++SA+ +VP P+LVPELAGAAAAE D+ A + WIAVG R V
Sbjct 1 MISAVAVVPEPPLLVPELAGAAAAETVDVRDACRTAAALLAARASRWIAVGADRGGRRTV 60
Query 57 RPTDVGTFAGFGADVRV----GLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVH 112
P VG+F GFG DVRV GLA G V +LPL L+ W+ +
Sbjct 61 APATVGSFVGFGVDVRVALDTGLATDRG---PVDRDLPLPLLVAGWLAAGTGAAIAVRGE 117
Query 113 VYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRAL 172
+ A D +A GR L A EPD +G+LVV DG T T +APG +D +
Sbjct 118 LVAPDAAPADCLALGRALAA----EPDGVGLLVVGDGAATHTEKAPGHFDTRATRFDARV 173
Query 173 DDALASGDLAVLTRLPAQVL------GRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFA 226
ALA+ D A L L A++ GR +QVLAG A+ AP GV Y
Sbjct 174 ATALAAADTAALAALDAELATQLWAGGRAPWQVLAGATADRRWDAELLCSTAPFGVAYHV 233
Query 227 GVWQP 231
W P
Sbjct 234 AFWTP 238
>gi|326384490|ref|ZP_08206170.1| hypothetical protein SCNU_16199 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196835|gb|EGD54029.1| hypothetical protein SCNU_16199 [Gordonia neofelifaecis NRRL
B-59395]
Length=296
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/258 (35%), Positives = 112/258 (44%), Gaps = 27/258 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVI---AAASLLPKSWIAVGTGR----AD 53
VLS + IVPSAP+LVPELAG A + + AAV+ + SWIAVG G
Sbjct 35 VLSLVAIVPSAPLLVPELAGPEAVDADPVRAAVVAAGERLAAAATSWIAVGAGELPRSGM 94
Query 54 DVVRPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQA-RPEARAQVH 112
D G F +GA V + L G LPL L+ WVRG+A R + V
Sbjct 95 DFRTYCGAGDFGAYGAPVEISLGNSPGTRPTGGAVLPLSMLVAGWVRGRADRDDRGVAVT 154
Query 113 VYASDHGSD--AAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQR 170
D G+ A G +L ++ +P+G+LVVADG LTP APGG + A +
Sbjct 155 PCVVDPGATPGECAAIGAELAGQLNALDEPVGLLVVADGATALTPSAPGGGERASAIELQ 214
Query 171 A-------LDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKE---------- 213
A D A L + GR A+QVLA
Sbjct 215 ARVDDALAHADTAALAALTAAECAAEGMAGRAAWQVLAAAYAAAGPKPGGAGGPGDAVDV 274
Query 214 FYRGAPHGVGYFAGVWQP 231
YR AP GVGY +W+P
Sbjct 275 LYRAAPFGVGYTVALWKP 292
>gi|257056742|ref|YP_003134574.1| hypothetical protein Svir_27660 [Saccharomonospora viridis DSM
43017]
gi|256586614|gb|ACU97747.1| hypothetical protein Svir_27660 [Saccharomonospora viridis DSM
43017]
Length=243
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/243 (35%), Positives = 108/243 (45%), Gaps = 26/243 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELA---DLGAAVIAAASLLPKSWIAVGTGRADDVVR 57
V+S +VP P+LVP L A A D A A + + K W+AVG G +
Sbjct 10 VISCAVVVPQPPLLVPALVPGAVERTAAVRDATLAAARALAEVSKQWLAVGVGARRATIE 69
Query 58 PTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYASD 117
P G+F GFG DV V L+ A P ELPL L+ W+R Q A +V + A
Sbjct 70 PDTQGSFRGFGVDVPVSLS--SAPTAAAPRELPLSVLVAGWLREQV-GAASVRVELVAEH 126
Query 118 HGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDG----------AG 167
V G QL A +R +LV+ DG +T AP G+ PD
Sbjct 127 ADVAECVTLGEQLAAAEER-----ALLVLGDG-STRHETAPSGW-PDARAEDFDARVRTA 179
Query 168 MQRALDDALASGDLAVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKE-FYRGAPHGVGYFA 226
+ A +AL + D A+ L AQ GR A+QVLAGLA E Y AP GV Y
Sbjct 180 LAEADHEALLAVDPALAAELQAQ--GRAAWQVLAGLARTRTGWRGEVLYSDAPFGVAYHV 237
Query 227 GVW 229
W
Sbjct 238 ARW 240
>gi|284033053|ref|YP_003382984.1| hypothetical protein Kfla_5170 [Kribbella flavida DSM 17836]
gi|283812346|gb|ADB34185.1| hypothetical protein Kfla_5170 [Kribbella flavida DSM 17836]
Length=226
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/236 (34%), Positives = 106/236 (45%), Gaps = 29/236 (12%)
Query 7 IVPSAPVLVPELAGAAAAELADLGAAVIAAASLLP--KSWIAVGTGRADDVVRP-TDVGT 63
+ P P+LVPE+A AAAEL DL AA AA L + VG+G T GT
Sbjct 8 VCPHPPLLVPEVASGAAAELDDLRAACFAALDQLADVDRLVVVGSGPTTGTQYDGTAAGT 67
Query 64 FAGFGA-DVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEA--RAQVHVYASDHGS 120
F +GA VRVG + PV LPL + AW+ G+++ R V V A+D
Sbjct 68 FGPYGASSVRVG---------SGPVVLPLSLTMGAWLIGRSKVAGVPRTSVTV-AADESP 117
Query 121 DAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGD 180
+A G++L DR +G+LV+ DG + +P P + ALA D
Sbjct 118 AGCLALGKELAGSNDR----VGLLVMGDGSARRSEHSPVHLHPRAEIFDSTIASALALAD 173
Query 181 LAVLTRL------PAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
L L GR +QVLA + E + Y AP+GVGYF VW
Sbjct 174 TTTLAALDPDLAAELSAAGRAPWQVLAAVPE---LTGNLLYHAAPYGVGYFVAVWS 226
>gi|296139511|ref|YP_003646754.1| hypothetical protein Tpau_1797 [Tsukamurella paurometabola DSM
20162]
gi|296027645|gb|ADG78415.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=206
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/224 (37%), Positives = 100/224 (45%), Gaps = 42/224 (18%)
Query 7 IVPSAPVLVPELAGAAAAELAD-LGAAVIAAASLL---PKSWIAVGTGRADDVVRPTDVG 62
++P AP+LVPEL G AD L AV+AA + L ++W VG G + RP G
Sbjct 13 VIPGAPLLVPELVGVPGDPEADRLRTAVVAAGTWLGDRARTWRVVGGG---PMTRPEGSG 69
Query 63 TFAGFGADVRVGLAPQDGDGVAVP-VELPLCALLTAWVRGQARPEARAQVHVYASDHGSD 121
+FAGFGADV V AP P PL L+ AWVRG + AR
Sbjct 70 SFAGFGADVLVTAAPGGPSHDRGPDPRWPLSLLIAAWVRGISASSARI------------ 117
Query 122 AAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDALASGDL 181
+ E D G + V DG NTLT RAPGGY P+ A + A DA+ G
Sbjct 118 ------------VGSEDDAEGTVFVLDGPNTLTERAPGGYRPEDAAVFAAQCDAVCEGTA 165
Query 182 AVLTRLPAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYF 225
A L A + A + GP YR AP GVGY
Sbjct 166 A--DGLDAD------WATAAAVFRAGP--VTTLYRDAPFGVGYL 199
>gi|271963755|ref|YP_003337951.1| hypothetical protein Sros_2226 [Streptosporangium roseum DSM
43021]
gi|270506930|gb|ACZ85208.1| hypothetical protein Sros_2226 [Streptosporangium roseum DSM
43021]
Length=222
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/236 (36%), Positives = 109/236 (47%), Gaps = 23/236 (9%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVV 56
+L A + P P+LVPELAGAAA EL +L AA AA L P + + VG
Sbjct 1 MLVAAAVCPHPPLLVPELAGAAAGELDELRAACAAAVGALRDSVPDAIVVVGGADLAGAH 60
Query 57 RPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYAS 116
G+FA +G DVRV G PV LPL + W+ + A + H
Sbjct 61 GADAAGSFAPWGVDVRV--------GAGEPV-LPLSLSIGRWLL-EREGMAASGFHAVPF 110
Query 117 DHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDAL 176
D +A A G QL P + +LV+ADG LT ++PG DP A+ +AL
Sbjct 111 DASPEACAALGGQLAG----VPGRVAMLVMADGSACLTEKSPGYLDPQARPYNHAIVEAL 166
Query 177 ASGDLAVLTRLPAQVL---GRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVW 229
++ L A L GR A QVLAG G + + Y AP+GVGYF W
Sbjct 167 GRAEVPALDPREAAELWVAGRAALQVLAGAG--GSLNGEVLYDDAPYGVGYFVARW 220
>gi|256375578|ref|YP_003099238.1| hypothetical protein Amir_1441 [Actinosynnema mirum DSM 43827]
gi|255919881|gb|ACU35392.1| hypothetical protein Amir_1441 [Actinosynnema mirum DSM 43827]
Length=243
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/243 (38%), Positives = 123/243 (51%), Gaps = 27/243 (11%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPK---SWIAVGT--GRADDV 55
++S + +VP P+LVPEL G A AE + AA +A A L W+AVG G ++
Sbjct 7 MISRVAVVPHPPLLVPELVGGAVAETEPVRAACLAGARELASRSAEWVAVGVAPGPVREL 66
Query 56 VRPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARA-QVHVY 114
R GTF GFG DVR+ L+ D G P +LPL AL+ W+R R AR+ +V +
Sbjct 67 SRAG--GTFGGFGVDVRIALS-DDATGEVDP-DLPLPALVAGWLR--ERVGARSVRVVLV 120
Query 115 ASDHGSDAAVARGRQLRADIDREPDPIG-VLVVADGLNTLTPRAPGGYDPDGAGMQRALD 173
D +D A G +L + P G +LV+ DG + RA G D AG ++
Sbjct 121 PPDLPADECAALGAELAS------APEGALLVLGDGSHRHGERAVGRPDERAAGFDGSVR 174
Query 174 DALASGDLAVLTRLPAQV------LGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAG 227
ALA D A L L ++ GR A+QVLAG+ PGP + AP GVGY
Sbjct 175 AALAGADPAALAALDPELARELGAQGRAAWQVLAGV--PGPWRCARSWFDAPFGVGYHLA 232
Query 228 VWQ 230
VW+
Sbjct 233 VWE 235
>gi|302522288|ref|ZP_07274630.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302431183|gb|EFL02999.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=243
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/250 (35%), Positives = 110/250 (44%), Gaps = 27/250 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVV 56
+L A + P P+LVP +A AA EL L AA A S+L P + VG D V
Sbjct 1 MLVAAALCPCPPLLVPRIAAGAAGELDALRAACADALSVLAASRPDRLLVVGPVAGDGAV 60
Query 57 RPTD--VGTFAGFGADVRVGLAP--------QDGDGVAVPVELPLCALLTAWVRGQARPE 106
R + G F GFG V V LA DG A+P L + A L A P
Sbjct 61 RHGEGARGGFHGFGVPVNVRLARVGQAESARATDDGPALPASLAVGAWLLENAAWAAAPV 120
Query 107 ARAQVHVYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGA 166
+ V + G++ +A G LR +R + VL + DG T T +APG D A
Sbjct 121 SGLAV---GEESGTEECLALGESLRVPEER----LAVLALGDGSTTRTVKAPGYLDERAA 173
Query 167 GMQRALDDALASGD---LAVLTRLPAQVLG---RVAFQVLAGLAEPGPRSAKEFYRGAPH 220
A+ ALA D LA L A+ LG R +QVLAG A + Y AP+
Sbjct 174 PWDSAVAKALADADTEGLAALDPATARALGCAGRAPWQVLAGAARGTDLTGSLLYEEAPY 233
Query 221 GVGYFAGVWQ 230
GVGYF W
Sbjct 234 GVGYFVAAWS 243
>gi|297156735|gb|ADI06447.1| hypothetical protein SBI_03326 [Streptomyces bingchenggensis
BCW-1]
Length=240
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/244 (33%), Positives = 112/244 (46%), Gaps = 18/244 (7%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDV- 55
+L A + P P+LVPE+A AA EL L AA + A +L P+ I VG D
Sbjct 1 MLIAAAVCPCPPLLVPEVAAGAAGELDGLRAACLDAVGVLAAARPERLIVVGPAERDGRG 60
Query 56 VRPTDV-GTFAGFGADVRVGLAPQDGDGVAVPVE--LPLCALLTAWVRGQARPEARAQVH 112
P G+F GFG D+ V L G+ A E LP + AW+ +AR +A
Sbjct 61 PHPQGTPGSFRGFGVDLDVRLGGW-GEAAAEVSERTLPPSLAVAAWLLERARWQA---AP 116
Query 113 VYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRAL 172
V G A R R++ ++ + + + +LV+ DG + +APG D AG +
Sbjct 117 VEGLGVGEPLASERCREVGRELAAQAEQVALLVMGDGSACRSLKAPGYLDERAAGFDADV 176
Query 173 DDALASGDLAVLTRLPAQVL------GRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFA 226
AL + D+ L L ++ GR QVLAG E + Y AP+GVGYF
Sbjct 177 ARALGAADVGALAALDEELAAELKAAGRAPLQVLAGAGEGAALKGELRYEAAPYGVGYFV 236
Query 227 GVWQ 230
+W
Sbjct 237 AMWS 240
>gi|343927000|ref|ZP_08766488.1| hypothetical protein GOALK_077_00240 [Gordonia alkanivorans NBRC
16433]
gi|343763058|dbj|GAA13414.1| hypothetical protein GOALK_077_00240 [Gordonia alkanivorans NBRC
16433]
Length=244
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/250 (36%), Positives = 122/250 (49%), Gaps = 32/250 (12%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAV----IAAASLLPKSWIAVGTGRADDVV 56
+L+A+ VPSAP+LVPELAG +A + + +AV AAS W+ VG +DD V
Sbjct 1 MLAAVVFVPSAPLLVPELAGPSAFDTEPVRSAVRDALADAASTGIDRWVVVGA--SDDPV 58
Query 57 ----RPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVH 112
+ G FA +G DVRV ++ + G + L AL+ AW+R A +
Sbjct 59 TGPVEESGSGGFARYGVDVRVSVSDRTGR------RMSLSALIGAWLREWAALGPTSMSI 112
Query 113 VYASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRAL 172
V + ++ AV G L A + + P+ IG+LVV DG LTP+APGG D A AL
Sbjct 113 VGRATTPAECAVI-GADLGARLRKSPERIGLLVVGDGSTALTPKAPGGGRRDSA---VAL 168
Query 173 DDALASGDLAVLTRLPAQ----------VLGRVAFQVLAGLAEPGPRS--AKEFYRGAPH 220
+D++ + A T V GRVA+QV A + AK Y AP
Sbjct 169 NDSIVAAIAAADTAALLDLDDAPCDTEGVGGRVAWQVAAAAVDHSGSGVVAKTRYAEAPF 228
Query 221 GVGYFAGVWQ 230
GVGY G W
Sbjct 229 GVGYVVGTWT 238
>gi|320008157|gb|ADW03007.1| hypothetical protein Sfla_1569 [Streptomyces flavogriseus ATCC
33331]
Length=239
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/243 (35%), Positives = 107/243 (45%), Gaps = 17/243 (6%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDV- 55
+L A + P P+LVPE+AG A EL +A + A +L P I G DD
Sbjct 1 MLVAAAVCPCPPLLVPEVAGGAGPELDAARSACLDALGVLAAARPDLLIVAGPAGPDDRG 60
Query 56 -VRPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPE-ARAQVHV 113
P G+FAGFG D+ V L A LP + AW+ G AR + A A+
Sbjct 61 PFPPGSSGSFAGFGVDLTVRLGEPPAGSPAPERPLPASLAVGAWLLGLARWDGAPAEGLG 120
Query 114 YASDHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALD 173
+D V G L A +R + +LV+ DG T +APG D AG A
Sbjct 121 VEETLPADRCVRAGADLAARAER----VALLVMGDGSACRTVKAPGYLDERAAGFDAAAV 176
Query 174 DALASGDLAVLTRL------PAQVLGRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAG 227
AL S DLA L L + GR +QVLAG A + Y AP+GVGY
Sbjct 177 RALGSADLAALEALDESLAYELKAAGRAPWQVLAGAARGAGLGGRLLYEDAPYGVGYAVA 236
Query 228 VWQ 230
VW
Sbjct 237 VWS 239
>gi|134098333|ref|YP_001103994.1| hypothetical protein SACE_1751 [Saccharopolyspora erythraea NRRL
2338]
gi|133910956|emb|CAM01069.1| hypothetical protein SACE_1751 [Saccharopolyspora erythraea NRRL
2338]
Length=179
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/180 (42%), Positives = 86/180 (48%), Gaps = 13/180 (7%)
Query 58 PTDVGTFAGFGADVRVGL-APQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYAS 116
P GTFA FG DV V L A Q G A P+ LPL AL+T W+R QA ARA H+ A
Sbjct 4 PATTGTFASFGVDVPVSLSAAQAPAGGADPL-LPLPALVTGWLRAQAG-AARATAHLLAP 61
Query 117 DHGSDAAVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDDAL 176
D + GR+L A PDP+G+LV+ADG N T R+P + L AL
Sbjct 62 DLDAQRCREYGRELAAG----PDPVGLLVLADGTNCRTERSPNPPHERAEPVDELLRTAL 117
Query 177 ASGDLAVLTRLPAQVL------GRVAFQVLAGLAEPGPRSAKEFYRGAPHGVGYFAGVWQ 230
A D L L A V GR A LAG AE G K Y P GV Y VW
Sbjct 118 AEADADRLLELDATVAAQVGVEGRAALHALAGAAEDGRWRGKLLYSDVPFGVTYHVAVWS 177
>gi|145593991|ref|YP_001158288.1| hypothetical protein Strop_1444 [Salinispora tropica CNB-440]
gi|145303328|gb|ABP53910.1| hypothetical protein Strop_1444 [Salinispora tropica CNB-440]
Length=278
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/268 (30%), Positives = 112/268 (42%), Gaps = 38/268 (14%)
Query 2 LSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVVR 57
L A + P P+LVPE+AGAA+AEL +L A A + L P + +G G
Sbjct 6 LVAAAVCPHPPLLVPEVAGAASAELDELRTACDGAVARLLAAEPDRIVLIGCGPQTMTFG 65
Query 58 PTDVGTFAGFGADVRVGLAPQD-----GDGVAVPVELPLCALLTAWVRGQARPEARAQVH 112
+ G+F +G + RV L+P D G+ P LPL + AW+ G+A
Sbjct 66 TAEHGSFRRYGVNRRVPLSPIDATDRTGEAAVGPARLPLSLTIGAWLLGRAGTALPRSAV 125
Query 113 VYASDHGS-----------DAAVARGRQLRADI-------DREPDP---IGVLVVADGLN 151
A D + DA + L AD+ + D +G+LV+ DG
Sbjct 126 AVAPDEPAARCATLGAGLPDADLFDADPLNADLLGSVTGNTSDGDSSCRLGLLVLGDGSA 185
Query 152 TLTPRAPGGYDPDGAGMQRALDDALASGDLAVLTRLPAQV------LGRVAFQVLAGLAE 205
+PG DP +A+ ALA D L L A++ GR +QVLAG
Sbjct 186 CRVEWSPGYDDPRAEPYDQAVARALAGADTVALGALDAELSAGLKATGRAPWQVLAGAVR 245
Query 206 PG--PRSAKEFYRGAPHGVGYFAGVWQP 231
P + Y AP+GV Y W P
Sbjct 246 AAGVPWRGELAYAAAPYGVTYLVASWAP 273
>gi|311742263|ref|ZP_07716072.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313891|gb|EFQ83799.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length=230
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/245 (34%), Positives = 109/245 (45%), Gaps = 44/245 (17%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLL----PKSWIAVGTGRADDVV 56
V+ A+ + P PVLVPE+ G +A +L + +A AA + L P + + G D+
Sbjct 10 VIVAVAVCPPTPVLVPEVTGGSAPDLEPVRSASHAAVARLVAGEPDLVVVLAPGIDDEPK 69
Query 57 RPTDVGTFAGFGADVRVGLAPQDGDGVAVPVELPLCALLTAWVRGQARPEARAQVHVYAS 116
GT GFG DVR G GD + LP + AW+
Sbjct 70 DGLAGGTLHGFGVDVRAG-----GDDLV----LPYAHTIGAWLL---------------- 104
Query 117 DHGSDAAVARGRQLRADIDREP--DPIGVLVVADGLNTLTPRAPGGYDPDGAGMQRALDD 174
D A G +L A EP + +LV+ADG + RAPG DP G R +
Sbjct 105 ----DRAGWTGPRLHAGSPPEPLDGRVALLVLADGSARRSDRAPGHLDPRAEGFDRTVQT 160
Query 175 ALASGDLAVLTRL------PAQVLGRVAFQVLAG-LAEP-GPR-SAKEFYRGAPHGVGYF 225
ALA+GD+A L L V G + +A LA P GPR +A+ Y GAP GVGY+
Sbjct 161 ALATGDVAALADLDLATAAELMVGGATTLRAMAEVLAAPSGPRWTARLGYAGAPLGVGYW 220
Query 226 AGVWQ 230
W
Sbjct 221 VADWS 225
>gi|326443849|ref|ZP_08218583.1| hypothetical protein SclaA2_22418 [Streptomyces clavuligerus
ATCC 27064]
Length=245
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 111/250 (45%), Gaps = 25/250 (10%)
Query 1 VLSAIGIVPSAPVLVPELAGAAAAELADLGAAVIAAASLLPKSW--IAVGTGRADDVVR- 57
+L A + P P+LVPE+A AA ELA A AA +L S + V G AD
Sbjct 1 MLVAAAVCPCPPLLVPEVAAGAAPELAGTRDACAAAVGVLAASRPDLLVVVGPADPGAEG 60
Query 58 PTDVGT---FAGFGAD--VRVGLAP-----QDGDGVAVPVELPLCALLTAWVRGQARPEA 107
P GT F GFG D VR+G P QD + ELP + AW+ G AR +A
Sbjct 61 PYPAGTPGSFRGFGVDLAVRLGSGPGAAAGQDAE-RDTGRELPYALAVGAWLLGGARWDA 119
Query 108 RAQVHVYASDHGSDA-AVARGRQLRADIDREPDPIGVLVVADGLNTLTPRAPGGYDPDGA 166
A + ++ + A AV GR DR + +LV+ DG T +APG D
Sbjct 120 CAVAGLGVTEELTAADAVELGRTTGVRADR----VALLVMGDGSACRTLKAPGYLDERAE 175
Query 167 GMQRALDDALASGDLAVLTRLPA------QVLGRVAFQVLAGLAEPGPRSAKEFYRGAPH 220
G + AL D L L A + GR +QVLAG AE + + + AP+
Sbjct 176 GFDALVSRALGGADTGALKALDAGLARELKAAGRAPWQVLAGAAEGRGLAGRLLHDEAPY 235
Query 221 GVGYFAGVWQ 230
GV Y W
Sbjct 236 GVAYPVAAWT 245
Lambda K H
0.319 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 303731659968
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40