BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2735c
Length=330
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609872|ref|NP_217251.1| hypothetical protein Rv2735c [Mycob... 689 0.0
gi|306785541|ref|ZP_07423863.1| hypothetical protein TMCG_01980 ... 685 0.0
gi|308232230|ref|ZP_07664034.1| hypothetical protein TMAG_03120 ... 611 5e-173
gi|308369844|ref|ZP_07666815.1| hypothetical protein TMBG_02869 ... 608 4e-172
gi|339295589|gb|AEJ47700.1| hypothetical protein CCDC5079_2510 [... 483 2e-134
gi|296164531|ref|ZP_06847102.1| conserved hypothetical protein [... 355 7e-96
gi|119714074|ref|YP_919216.1| hypothetical protein Noca_4767 [No... 304 1e-80
gi|336115756|ref|YP_004570522.1| hypothetical protein MLP_01050 ... 296 3e-78
gi|291303707|ref|YP_003514985.1| hypothetical protein Snas_6272 ... 219 3e-55
gi|325674285|ref|ZP_08153974.1| hypothetical protein HMPREF0724_... 122 1e-25
gi|94496690|ref|ZP_01303265.1| hypothetical protein SKA58_16163 ... 81.6 2e-13
gi|217424757|ref|ZP_03456254.1| hypothetical protein BUC_3936 [B... 73.9 4e-11
gi|134283262|ref|ZP_01769963.1| hypothetical protein BURPS305_19... 73.6 4e-11
gi|254445042|ref|ZP_05058518.1| hypothetical protein VDG1235_328... 65.5 1e-08
gi|225155117|ref|ZP_03723612.1| hypothetical protein ObacDRAFT_9... 62.4 9e-08
gi|298294292|ref|YP_003696231.1| hypothetical protein Snov_4353 ... 55.5 1e-05
gi|156740347|ref|YP_001430476.1| hypothetical protein Rcas_0326 ... 55.1 2e-05
gi|75906396|ref|YP_320692.1| hypothetical protein Ava_0171 [Anab... 54.3 2e-05
gi|260574536|ref|ZP_05842540.1| conserved hypothetical protein [... 53.1 7e-05
gi|172035870|ref|YP_001802371.1| hypothetical protein cce_0954 [... 53.1 7e-05
gi|45656300|ref|YP_000386.1| hypothetical protein LIC10400 [Lept... 51.2 3e-04
gi|281419210|ref|ZP_06250226.1| conserved hypothetical protein [... 50.4 4e-04
gi|220903511|ref|YP_002478823.1| hypothetical protein Ddes_0230 ... 50.4 4e-04
gi|337266796|ref|YP_004610851.1| hypothetical protein Mesop_2281... 49.3 8e-04
gi|256396026|ref|YP_003117590.1| hypothetical protein Caci_6913 ... 46.6 0.005
gi|119491179|ref|ZP_01623276.1| hypothetical protein L8106_25225... 46.2 0.007
gi|288932687|ref|YP_003436747.1| hypothetical protein Ferp_2354 ... 43.1 0.060
gi|218249044|ref|YP_002374415.1| hypothetical protein PCC8801_43... 42.7 0.080
gi|288817610|ref|YP_003431957.1| putative bacteriophage protein ... 40.8 0.27
gi|71275509|ref|ZP_00651795.1| Protein of unknown function DUF51... 40.8 0.31
gi|71899711|ref|ZP_00681863.1| Protein of unknown function DUF51... 40.8 0.32
gi|28197975|ref|NP_778289.1| transformation competence-related p... 40.8 0.33
gi|66767744|ref|YP_242506.1| hypothetical protein XC_1418 [Xanth... 38.9 1.1
gi|341937782|gb|AEL07921.1| protein involved in catabolism of ex... 38.9 1.1
gi|21232127|ref|NP_638044.1| hypothetical protein XCC2696 [Xanth... 38.9 1.2
gi|188990861|ref|YP_001902871.1| hypothetical protein xccb100_14... 38.5 1.4
gi|118593654|ref|ZP_01551030.1| hypothetical protein SIAM614_213... 38.5 1.7
gi|21243583|ref|NP_643165.1| hypothetical protein XAC2856 [Xanth... 37.0 4.1
gi|325916550|ref|ZP_08178816.1| protein involved in catabolism o... 37.0 4.8
gi|302527943|ref|ZP_07280285.1| 1,4-alpha-glucan branching enzym... 36.6 6.4
gi|294793334|ref|ZP_06758479.1| carbamoyl-phosphate synthase, la... 36.6 6.5
gi|282850076|ref|ZP_06259458.1| carbamoyl-phosphate synthase, la... 36.6 6.5
gi|16263662|ref|NP_436455.1| hypothetical protein SMa2243 [Sinor... 36.2 6.7
gi|238019707|ref|ZP_04600133.1| hypothetical protein VEIDISOL_01... 36.2 6.9
gi|325921175|ref|ZP_08183043.1| protein involved in catabolism o... 36.2 7.1
>gi|15609872|ref|NP_217251.1| hypothetical protein Rv2735c [Mycobacterium tuberculosis H37Rv]
gi|15842274|ref|NP_337311.1| hypothetical protein MT2804 [Mycobacterium tuberculosis CDC1551]
gi|31793907|ref|NP_856400.1| hypothetical protein Mb2754c [Mycobacterium bovis AF2122/97]
52 more sequence titles
Length=330
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/330 (100%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI 60
MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI
Sbjct 1 MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI 60
Query 61 AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW 120
AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW
Sbjct 61 AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW 120
Query 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ
Sbjct 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
Query 181 VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT 240
VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT
Sbjct 181 VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT 240
Query 241 IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV 300
IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV
Sbjct 241 IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV 300
Query 301 QDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
QDSNAGQILWAPSPTWDPRARGWWSEDPGF
Sbjct 301 QDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
>gi|306785541|ref|ZP_07423863.1| hypothetical protein TMCG_01980 [Mycobacterium tuberculosis SUMu003]
gi|306804495|ref|ZP_07441163.1| hypothetical protein TMHG_01933 [Mycobacterium tuberculosis SUMu008]
gi|308329794|gb|EFP18645.1| hypothetical protein TMCG_01980 [Mycobacterium tuberculosis SUMu003]
gi|308348907|gb|EFP37758.1| hypothetical protein TMHG_01933 [Mycobacterium tuberculosis SUMu008]
Length=330
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/330 (99%), Positives = 329/330 (99%), Gaps = 0/330 (0%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI 60
MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI
Sbjct 1 MAREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLI 60
Query 61 AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW 120
AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW
Sbjct 61 AMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRW 120
Query 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ
Sbjct 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
Query 181 VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT 240
VTRMYGDADWKRIQAARWRHHLTAPAY AEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT
Sbjct 181 VTRMYGDADWKRIQAARWRHHLTAPAYCAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT 240
Query 241 IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV 300
IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV
Sbjct 241 IFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV 300
Query 301 QDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
QDSNAGQILWAPSPTWDPRARGWWSEDPGF
Sbjct 301 QDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
>gi|308232230|ref|ZP_07664034.1| hypothetical protein TMAG_03120 [Mycobacterium tuberculosis SUMu001]
gi|308379303|ref|ZP_07668938.1| hypothetical protein TMJG_01717 [Mycobacterium tuberculosis SUMu010]
gi|308405955|ref|ZP_07494541.2| hypothetical protein TMLG_02447 [Mycobacterium tuberculosis SUMu012]
gi|308214669|gb|EFO74068.1| hypothetical protein TMAG_03120 [Mycobacterium tuberculosis SUMu001]
gi|308357526|gb|EFP46377.1| hypothetical protein TMJG_01717 [Mycobacterium tuberculosis SUMu010]
gi|308365075|gb|EFP53926.1| hypothetical protein TMLG_02447 [Mycobacterium tuberculosis SUMu012]
Length=292
Score = 611 bits (1575), Expect = 5e-173, Method: Compositional matrix adjust.
Identities = 292/292 (100%), Positives = 292/292 (100%), Gaps = 0/292 (0%)
Query 39 MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR 98
MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR
Sbjct 1 MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR 60
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM 158
VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM
Sbjct 61 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM 120
Query 159 LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVK 218
LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVK
Sbjct 121 LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVK 180
Query 219 LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA 278
LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA
Sbjct 181 LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA 240
Query 279 KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF
Sbjct 241 KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 292
>gi|308369844|ref|ZP_07666815.1| hypothetical protein TMBG_02869 [Mycobacterium tuberculosis SUMu002]
gi|308372383|ref|ZP_07667366.1| hypothetical protein TMDG_00446 [Mycobacterium tuberculosis SUMu004]
gi|308373495|ref|ZP_07432522.2| hypothetical protein TMEG_03411 [Mycobacterium tuberculosis SUMu005]
7 more sequence titles
Length=292
Score = 608 bits (1567), Expect = 4e-172, Method: Compositional matrix adjust.
Identities = 291/292 (99%), Positives = 291/292 (99%), Gaps = 0/292 (0%)
Query 39 MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR 98
MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR
Sbjct 1 MAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYR 60
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM 158
VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM
Sbjct 61 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWM 120
Query 159 LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVK 218
LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAY AEMVNLMRVK
Sbjct 121 LMSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYCAEMVNLMRVK 180
Query 219 LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA 278
LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA
Sbjct 181 LEYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSA 240
Query 279 KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF
Sbjct 241 KQQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 292
>gi|339295589|gb|AEJ47700.1| hypothetical protein CCDC5079_2510 [Mycobacterium tuberculosis
CCDC5079]
gi|339299207|gb|AEJ51317.1| hypothetical protein CCDC5180_2480 [Mycobacterium tuberculosis
CCDC5180]
Length=231
Score = 483 bits (1244), Expect = 2e-134, Method: Compositional matrix adjust.
Identities = 230/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 100 VAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWML 159
+AGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWML
Sbjct 1 MAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWML 60
Query 160 MSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKL 219
MSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKL
Sbjct 61 MSPTMIARGVKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKL 120
Query 220 EYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAK 279
EYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAK
Sbjct 121 EYELGYKYSHRIPMQMHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAK 180
Query 280 QQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 330
QQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF
Sbjct 181 QQKESEDRGEMGLFSVGELAVQDSNAGQILWAPSPTWDPRARGWWSEDPGF 231
>gi|296164531|ref|ZP_06847102.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900131|gb|EFG79566.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=319
Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/318 (59%), Positives = 223/318 (71%), Gaps = 13/318 (4%)
Query 13 LEILAGYLPAFNRA-SQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADPPFTRL 71
+EIL GYLPAF RA S SRE IYLDLMAGQP+N++R G +FDGS ++AMKA PPFT+L
Sbjct 1 MEILTGYLPAFTRAVSGKSRECIYLDLMAGQPKNVERYTGTEFDGSPVVAMKARPPFTKL 60
Query 72 RFCELNP-LASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRWAPTFAFIDQQ 130
RF EL+ A L+ LR FPGD RY VV GD NVTID LA L WAPTFA++DQQ
Sbjct 61 RFGELSAGRAQALETHLRQEFPGDTRYEVVQGDCNVTIDGVLAGLADVAWAPTFAYVDQQ 120
Query 131 AAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNA---ELFIEQVTRMYGD 187
AAEVHW+TI K+A FR+N + KTE+W+L+SPTMI +GV+G E + EQV R+YG
Sbjct 121 AAEVHWKTIEKLARFRRNKQGWKTEIWILVSPTMINKGVRGRGGIPYEPYREQVDRLYGG 180
Query 188 ADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVTIFDMVFA 247
+W++I A + +T YR +MVNLMR KLE+ELGY +HRIPMQM NK I+DMVFA
Sbjct 181 GEWRQILRALDQRKITPSEYRKQMVNLMRWKLEHELGYAITHRIPMQMPNKTEIYDMVFA 240
Query 248 TDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAVQDSNAGQ 307
TDH AGD IM HLYN AA +EPEMMRQAK AK G+ LF + D+NAG+
Sbjct 241 TDHEAGDRIMQHLYNEAALREPEMMRQAKEAKT-------GQFSLFE-DDGGFDDANAGE 292
Query 308 ILWAPSPTWDPRARGWWS 325
LW P P WDP A WWS
Sbjct 293 RLWRPEPCWDPTAADWWS 310
>gi|119714074|ref|YP_919216.1| hypothetical protein Noca_4767 [Nocardioides sp. JS614]
gi|119525983|gb|ABL79353.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=317
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/325 (51%), Positives = 214/325 (66%), Gaps = 10/325 (3%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQ-TSRERIYLDLMAGQPENIDRDMGEKFDGSSL 59
MAR WSYW+RNKLEIL YLPAFN AS+ + ERIY+D+MAG+PEN DR+ GE FDGS+
Sbjct 1 MARGWSYWSRNKLEILTDYLPAFNSASKGKASERIYIDVMAGEPENHDRETGESFDGSAR 60
Query 60 IAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWR 119
IAM A P FTR F E+ P A++L+ L R G ++V GD N TI LA+L
Sbjct 61 IAMAAAPGFTRFAFGEMPPKAAQLEADLEPRSAGRP-FKVYEGDCNATIKGMLADLSDVC 119
Query 120 WAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIE 179
WAPTFAF+DQQAAE+HWET+ +AAFR+ K E W+L SP M+ +G+ G+N +L+
Sbjct 120 WAPTFAFLDQQAAELHWETMAAIAAFRRG--KTKAEQWILWSPAMLIKGLTGSNGDLYFA 177
Query 180 QVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKV 239
+V RMYG W+RI AAR R +TA +RAEMVNL+R +LE +LGY ++ RIPM+M N V
Sbjct 178 RVDRMYGTNAWRRIFAARRREVITAEEFRAEMVNLIRWRLETKLGYLHTARIPMRMLNGV 237
Query 240 TIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELA 299
TI+DMVFATDH G IM HLY +AA++EP M ++A ++ K++ + LF +
Sbjct 238 TIYDMVFATDHDVGLKIMSHLYAKAAEREPRMRQEA--IERSKQAPRYADDFLFDMQPA- 294
Query 300 VQDSNAGQILWAPSPTWDPRARGWW 324
N W P DP R WW
Sbjct 295 ---PNPSVPKWRSEPCTDPTERDWW 316
>gi|336115756|ref|YP_004570522.1| hypothetical protein MLP_01050 [Microlunatus phosphovorus NM-1]
gi|334683534|dbj|BAK33119.1| hypothetical protein MLP_01050 [Microlunatus phosphovorus NM-1]
Length=311
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/326 (49%), Positives = 204/326 (63%), Gaps = 19/326 (5%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQT-SRERIYLDLMAGQPENIDRDMGEKFDGSSL 59
MAR WSYW+RNKLEIL GYLPAFN A++ S ERIY+DLMAG+PEN DRD GE FDGS+
Sbjct 1 MARGWSYWSRNKLEILQGYLPAFNNAAKNKSSERIYIDLMAGEPENFDRDTGETFDGSAR 60
Query 60 IAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWR 119
IA++A P FTR F E+ P ++ L L R+ G +RV AGD NVT+D L++L R
Sbjct 61 IALEAQPTFTRFAFGEMPPKSARLKADLDNRYTG-APFRVYAGDCNVTVDRMLSDLSDVR 119
Query 120 WAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIE 179
WAPTFAF+DQQAAE+ W+T+ K+A FR K E W+L SP MI +GV GTN F +
Sbjct 120 WAPTFAFLDQQAAELRWDTMAKLAGFRSG--KTKAEQWILWSPAMIVKGVMGTNGAAFAD 177
Query 180 QVTRMYGDADWKRIQAARWRHH-LTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNK 238
+V +YG W++I AR + A +R EMVNL+R + E +L Y ++ RIPM M N
Sbjct 178 KVDNLYGSGRWRQILDARINEKSIEASEFRREMVNLLRWQFETQLRYGHTIRIPMTMKNN 237
Query 239 VTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGEL 298
++DMVFATDH AG IM HLY +AA++EP+M ++A A + LFS
Sbjct 238 TDLYDMVFATDHNAGLKIMSHLYKKAAEREPKMKQEAIDAASPQGV-------LFS---- 286
Query 299 AVQDSNAGQILWAPSPTWDPRARGWW 324
D + W WDP WW
Sbjct 287 ---DYSGPIPEWTSEQCWDPADSSWW 309
>gi|291303707|ref|YP_003514985.1| hypothetical protein Snas_6272 [Stackebrandtia nassauensis DSM
44728]
gi|290572927|gb|ADD45892.1| hypothetical protein Snas_6272 [Stackebrandtia nassauensis DSM
44728]
Length=339
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/326 (40%), Positives = 181/326 (56%), Gaps = 7/326 (2%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQT-SRERIYLDLMAGQPENIDRDMGEKFDGSSL 59
M R W +WT++KLEIL YL AF A++ S+ RIY DL AG P+N + E+ GS+
Sbjct 1 MERLWGWWTQHKLEILGEYLQAFATATKNKSKSRIYFDLFAGVPKNRAKLTNEEIVGSAQ 60
Query 60 IAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWR 119
A+ DPPFT + EL P A L AL +FP RV GD NV ID L + R
Sbjct 61 RALTTDPPFTHVALFELAPKAQLLRNALAQQFPRHTGVRVYDGDCNVQIDRALGDFAHVR 120
Query 120 WAPTFAFIDQQAAEVHWETINKVAAFRQNPRNL--KTELWMLMSPTMIARGV---KGTNA 174
WAP FAF+DQ E+ WET+ K+A FR+ R + KTELW+L+ + R + G
Sbjct 121 WAPAFAFVDQHDNEIRWETLTKLARFRRTMRRVPTKTELWILLGTSFNVRTLLRKDGRAN 180
Query 175 ELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQ 234
+ + +TRM+GD W+ I AR ++A +RAE VNLMR +LE LGY ++ M+
Sbjct 181 GEYADSLTRMFGDDSWRPIVEARRDELISATMFRAEWVNLMRWRLERVLGYGITYAFTMK 240
Query 235 MHNKVTIFDMVFATDHWAGDAIMCHLYNRAAQKEPEMMRQA-KSAKQQKESEDRGEMGLF 293
++DMVFA+DH AG IM HLY +AA + +M + A + + Q + G +GLF
Sbjct 241 ETGGKDLYDMVFASDHQAGQKIMAHLYGKAAARHEQMRQHALRIRRDQSLQKKDGTVGLF 300
Query 294 SVGELAVQDSNAGQILWAPSPTWDPR 319
++ V + L+ +PR
Sbjct 301 ALTTDMVVVDVPNKELYVHDQPHEPR 326
>gi|325674285|ref|ZP_08153974.1| hypothetical protein HMPREF0724_11756 [Rhodococcus equi ATCC
33707]
gi|325554965|gb|EGD24638.1| hypothetical protein HMPREF0724_11756 [Rhodococcus equi ATCC
33707]
Length=257
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/232 (33%), Positives = 123/232 (54%), Gaps = 12/232 (5%)
Query 80 ASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELG-PW-RWAPTFAFIDQQAAEVHWE 137
A+ L++ LR ++PG V+ GD NV I L L W R+A FA +DQ +AE+ W+
Sbjct 6 AANLEMELRAQYPGRS-LEVLRGDCNVEIPGYLKTLSIDWPRYAAVFAMVDQFSAEISWD 64
Query 138 TINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTN---------AELFIEQVTRMYGDA 188
T+ ++ FR+N R K ELW+ ++ RG+ + + + +++ RMYG A
Sbjct 65 TLEYLSRFRRNKRGFKVELWLYFGHGLLPRGLGLGDEPDKAAVKRVQEYADRIDRMYGTA 124
Query 189 DWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVTIFDMVFAT 248
W+ + AR L+ ++R E+VNLMR +LE LGYK + + N I+ ++FAT
Sbjct 125 QWRELWRAREAGSLSGASFRGELVNLMRWRLERVLGYKTTLPLEFTNENGNPIYTVIFAT 184
Query 249 DHWAGDAIMCHLYNRAAQKEPEMMRQAKSAKQQKESEDRGEMGLFSVGELAV 300
+ G IM ++++ M +K+AK+ + ED GE LF E+
Sbjct 185 SNDTGAHIMNSVFSKHGVALANMRNMSKAAKRLEREEDAGEFSLFGAEEIGT 236
>gi|94496690|ref|ZP_01303265.1| hypothetical protein SKA58_16163 [Sphingomonas sp. SKA58]
gi|94423703|gb|EAT08729.1| hypothetical protein SKA58_16163 [Sphingomonas sp. SKA58]
Length=292
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (25%), Positives = 119/269 (45%), Gaps = 35/269 (13%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADPP 67
WT NK ++ Y+ F + ++ Y+D A D+ S+ + ++A+P
Sbjct 27 WTENKARLIQEYIKLF---TYVTKHGAYIDGFAAPQRRERSDLC-----SAKLVLEAEPQ 78
Query 68 FTR-LRFCELNP----LASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRWAP 122
R L C+++P L E+ A ++ R V+ GD N TI LA
Sbjct 79 RVRELWLCDIDPKGIALLHEIKAAHESK---RRRIHVMEGDFNATISTILASGRITERTA 135
Query 123 TFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQVT 182
TFA +DQ+ E W T+ +A Q+ + K E++ ++ I R + E +V
Sbjct 136 TFALLDQRTFECAWSTVEAIA---QHKKGTKIEIFYFLATGWIDRSIAAVRREATAARVE 192
Query 183 RMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNK---- 238
R +G +DW+ ++ + E NL+ + + ELGY +++ P +H+
Sbjct 193 RWWGRSDWRTLRGLQ----------GVERANLLVQRFKTELGYAFAY--PYAIHDSRQGG 240
Query 239 VTIFDMVFATDHWAGDAIMCHLYNRAAQK 267
T++ MV ATDH +M Y + + +
Sbjct 241 RTMYHMVHATDHPEASPLMLRAYRKVSGR 269
>gi|217424757|ref|ZP_03456254.1| hypothetical protein BUC_3936 [Burkholderia pseudomallei 576]
gi|217392213|gb|EEC32238.1| hypothetical protein BUC_3936 [Burkholderia pseudomallei 576]
Length=304
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/272 (25%), Positives = 117/272 (44%), Gaps = 32/272 (11%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADPP 67
WT K +++A YL F ++ Y+D AG E DM + + + + + +P
Sbjct 42 WTSQKAKLIALYLKFF---VMVTKHGTYIDGFAGPQEP---DMPDSWAAN--LVLNNEPR 93
Query 68 FTRLRF-CELNPLASELDVALRTRFPGDGR------YRVVAGDSNVTIDETLAELGPWRW 120
+ R F CEL+ E L P + ++++GD N +ID L
Sbjct 94 WLRNFFLCELDKEKVESLKKLAADHPAPRKGQPKRSIKILSGDFNQSIDLVLQSGIVTEK 153
Query 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
FA +DQ+ E HWET+ K+A ++ K EL+ ++ + R G + ++
Sbjct 154 EAAFALLDQRTFECHWETVKKLATHKKQGN--KIELFYFLAVKWLHRSFSGLTVD--TQK 209
Query 181 VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKV- 239
+ +G DW ++ + ++ M+ +L E GY+Y+H P+ +
Sbjct 210 AQKWWGSDDWVDLKKLS----------QVDITTRMQQRLRNEFGYRYAHAWPIWERDSAE 259
Query 240 --TIFDMVFATDHWAGDAIMCHLYNRAAQKEP 269
++ M+ ATDH G +M Y +A P
Sbjct 260 GSVMYYMIHATDHEDGPKLMWRAYRQAVADIP 291
>gi|134283262|ref|ZP_01769963.1| hypothetical protein BURPS305_1905 [Burkholderia pseudomallei
305]
gi|134245457|gb|EBA45550.1| hypothetical protein BURPS305_1905 [Burkholderia pseudomallei
305]
Length=304
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/272 (25%), Positives = 117/272 (44%), Gaps = 32/272 (11%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADPP 67
WT K +++A YL F ++ Y+D AG E DM + + + + + +P
Sbjct 42 WTSQKAKLIALYLKFF---VMITKHGTYIDGFAGPQEP---DMPDSWAAN--LVLNNEPR 93
Query 68 FTRLRF-CELNPLASELDVALRTRFPGDGR------YRVVAGDSNVTIDETLAELGPWRW 120
+ R F CEL+ E L P + ++++GD N +ID L
Sbjct 94 WLRNFFLCELDKEKVESLKKLAADHPAPRKGQPKRSIKILSGDFNQSIDLVLQSGIVTEK 153
Query 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQ 180
FA +DQ+ E HWET+ K+A ++ K EL+ ++ + R G + ++
Sbjct 154 EAAFALLDQRTFECHWETVKKLATHKKQGN--KIELFYFLAVKWLHRSFSGLTVD--TQK 209
Query 181 VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKV- 239
+ +G DW ++ + ++ M+ +L E GY+Y+H P+ +
Sbjct 210 AQKWWGSDDWVDLKKLS----------QVDITTRMQQRLRNEFGYRYAHAWPIWERDSAE 259
Query 240 --TIFDMVFATDHWAGDAIMCHLYNRAAQKEP 269
++ M+ ATDH G +M Y +A P
Sbjct 260 GSVMYYMIHATDHEDGPKLMWRAYRQAVADIP 291
>gi|254445042|ref|ZP_05058518.1| hypothetical protein VDG1235_3285 [Verrucomicrobiae bacterium
DG1235]
gi|198259350|gb|EDY83658.1| hypothetical protein VDG1235_3285 [Verrucomicrobiae bacterium
DG1235]
Length=295
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/270 (27%), Positives = 108/270 (40%), Gaps = 31/270 (11%)
Query 4 EWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMK 63
++ WT+NK +A YL +F + +R Y+D AG R+ ++ + M+
Sbjct 26 DYPLWTKNKAHFIARYLKSF---TYVTRHGTYIDAFAGPQHEESRNDS----WAAKLVMQ 78
Query 64 ADPPFTRLRFCELNPLASELDVALRT-------RFPGDG--RYRVVAGDSNVTIDETLAE 114
+P + LR L LAS+ L+ + P + GD N T+ L E
Sbjct 79 NEPAW--LRNFHLFDLASDQIGHLKNIKKEYLEKHPKKPLRTVTITEGDCNTTLPRFLNE 136
Query 115 LGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNA 174
+F DQ++ E WET+ VA + K EL+ + I R +K
Sbjct 137 NPIQEKEASFCLFDQRSTECAWETVKYVAEHKGGKGGHKIELFYFLPQGWIDRTIKSWKN 196
Query 175 ELFIEQVTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQ 234
++ + R +G AD R A A R ELGYKYS P+Q
Sbjct 197 DV-ESRCLRWWGRADVLNFLKLRSNERGIAMADR----------FREELGYKYSFPFPIQ 245
Query 235 M--HNKVTIFDMVFATDHWAGDAIMCHLYN 262
N +F M+ A+DH +M YN
Sbjct 246 KFGKNGAVMFWMIHASDHSRATDLMRQSYN 275
>gi|225155117|ref|ZP_03723612.1| hypothetical protein ObacDRAFT_9314 [Opitutaceae bacterium TAV2]
gi|224804064|gb|EEG22292.1| hypothetical protein ObacDRAFT_9314 [Opitutaceae bacterium TAV2]
Length=302
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/260 (26%), Positives = 110/260 (43%), Gaps = 27/260 (10%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADPP 67
WT +K +++ YL F + Y+D AG P+N +R+ + ++ M
Sbjct 33 WTASKAQLIQRYLKLF---VMITHHGYYIDAFAG-PQNENRE--SSWAAKQVLEMTPKW- 85
Query 68 FTRLRFCELNPLASELDVALR-TRFPGDGR-YRVVAGDSNVTIDETLAELGPWRWAPTFA 125
F + CE+ L+ GD R +VAGDSN + LA TF
Sbjct 86 FRKFTLCEIGQKGLACLRELKEAEAKGDNRPVDIVAGDSNTELPRYLAANPTKEKMATFC 145
Query 126 FIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKG-TNAELFIEQVTRM 184
+DQ+ E W T+ VA +Q K E++ + R K N ++ +++ T
Sbjct 146 LLDQRTTECDWATVQAVAQHKQAGH--KVEIFYFLPSWWFERCTKNLKNPDVVLKRWT-- 201
Query 185 YGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYELGYKYSHRIPMQMHNKVT--IF 242
G DW+ A+ R + ++ + + ELGYK+++ P+ K + +F
Sbjct 202 -GLEDWRPFVQAK----------RKDRPWMLVERFKQELGYKHANYYPIYEDAKSSKVMF 250
Query 243 DMVFATDHWAGDAIMCHLYN 262
M+ TDH A +M YN
Sbjct 251 YMIHGTDHDAAPQLMSRAYN 270
>gi|298294292|ref|YP_003696231.1| hypothetical protein Snov_4353 [Starkeya novella DSM 506]
gi|296930803|gb|ADH91612.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length=305
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/207 (28%), Positives = 85/207 (42%), Gaps = 38/207 (18%)
Query 9 TRNKLEILAGYLPAFNRASQTSRERI-YLDLMAG-------------------QPENIDR 48
T KL +L Y+ AF A + RI Y+D AG + E +DR
Sbjct 16 TETKLRLLEEYIQAFATALRGKFPRIWYIDAFAGTGSRTIRIGATDANMFGEAKEETVDR 75
Query 49 DMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
G S+ IA+ P F RL F E + + LR + P + V+ GD+N I
Sbjct 76 KRG-----SARIALDVQPHFDRLIFMEQRKKHYDALMELRQQHPQRDIF-VLQGDANDII 129
Query 109 DETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMI--- 165
L L WR F+D V W+T+ +AA ++W L S + +
Sbjct 130 QSQL-HLADWRGTRAVIFLDPYGMNVDWKTLECIAA------TGAIDVWYLFSLSGLFRQ 182
Query 166 -ARGVKGTNAELFIEQVTRMYGDADWK 191
AR + G + +TRM G ++W+
Sbjct 183 AARNISGIDQHKR-AAITRMLGTSEWE 208
>gi|156740347|ref|YP_001430476.1| hypothetical protein Rcas_0326 [Roseiflexus castenholzii DSM
13941]
gi|156231675|gb|ABU56458.1| conserved hypothetical protein [Roseiflexus castenholzii DSM
13941]
Length=293
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/210 (27%), Positives = 88/210 (42%), Gaps = 36/210 (17%)
Query 8 WTRNKLEILAGYLPA----FNRASQTSR-ERIYLDLMAGQ----------------PENI 46
WT +KLE L YL A FN+ + + + IY+D AG PE
Sbjct 10 WTDDKLERLRKYLAAYTTIFNKNERARKLKTIYVDAFAGTGYRDRKTQPNDQLPLFPELE 69
Query 47 DRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNV 106
+ DGS+ IA+ +PPF + E + + L+ FP D + ++V D+N
Sbjct 70 QPEAAAFLDGSARIALGVEPPFKQYLLIERDSKREQALQQLKRDFP-DKQIKIVKEDANN 128
Query 107 TIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMS----- 161
+ + AE WR++ F+D +V W I +A R +LW L
Sbjct 129 YLTQWCAE-QDWRYSRAVVFLDPYGMQVSWGLIEALA------RTKAIDLWFLFPLGVAV 181
Query 162 PTMIARGVKGTNAELFIEQVTRMYGDADWK 191
++ R T A + + +TR+ G WK
Sbjct 182 NRLLTRKAPPTGA--WADALTRILGTDAWK 209
>gi|75906396|ref|YP_320692.1| hypothetical protein Ava_0171 [Anabaena variabilis ATCC 29413]
gi|75700121|gb|ABA19797.1| hypothetical protein Ava_0171 [Anabaena variabilis ATCC 29413]
Length=290
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (26%), Positives = 87/191 (46%), Gaps = 14/191 (7%)
Query 8 WTRNKLEILAGYLPAFNRASQTS-----RERIYLDLMAGQPENIDRDMGEKF-DGSSLIA 61
W+ KL++LA YL A++ R Y+D AG ++ +++ DGS L A
Sbjct 15 WSEEKLDLLAKYLKAYSVIMSEQKKSWLRAYYYIDAFAGSIRPRAKEDEQRYIDGSPLRA 74
Query 62 MKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSN-VTIDETLAELGPWRW 120
++ +P F F +++P E LR FP + G+ N V +E + +
Sbjct 75 LQTEPQFDGYWFIDISPRRVERVEKLREEFPHCA-IEISQGNCNQVLCNEIIPRIPYQSK 133
Query 121 APTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTEL-WMLMSPTMIARGVKGTNAELFIE 179
F F+D ++ W+T+ ++A N R + + +M T + + + E+ IE
Sbjct 134 TRAFVFLDPYGLQIDWDTVRELA----NTRTCDIFVNFSVMGVTRLLPRDQSPDPEV-IE 188
Query 180 QVTRMYGDADW 190
Q+ ++ G DW
Sbjct 189 QLNKVMGSTDW 199
>gi|260574536|ref|ZP_05842540.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259023432|gb|EEW26724.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length=298
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/215 (28%), Positives = 94/215 (44%), Gaps = 27/215 (12%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRER-IYLDLMAGQPENIDR-----------------D 49
W R KLE L YL + Q R + +Y+D AG P R D
Sbjct 14 WAREKLEALEKYLRFYCSVLQNPRLKLVYIDGFAGAPVTTLRGISATKSKGFLDDDQPED 73
Query 50 MGEKFDGSSLIAMKADPPFTRLRFCELNPL-ASELDVALRTRFPGDGRYRVVAGDSNVTI 108
E GS + A+ + F R F +L+ +EL+ L+ +P Y V GD+N I
Sbjct 74 QAEFVMGSPIRALDIEKGFDRHYFFDLDDRRVAELE-ELKPVWPKKWIY-VQVGDANERI 131
Query 109 DETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARG 168
+ ++G + AF+D + W T+ +AA R+ + + M ++ ++A+
Sbjct 132 RALMQKIGGFGDVKGVAFLDPYGPHLEWATLEALAATRKFEVIVNLPIHMAIN-RLLAKN 190
Query 169 VKGTNAELFIEQVTRMYGDADWKRIQAARWRHHLT 203
V N E + E + R +G DW+RI + HLT
Sbjct 191 VD-RNPE-WEEMIDRCFGTPDWRRIV---YPEHLT 220
>gi|172035870|ref|YP_001802371.1| hypothetical protein cce_0954 [Cyanothece sp. ATCC 51142]
gi|171697324|gb|ACB50305.1| unknown [Cyanothece sp. ATCC 51142]
Length=293
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/191 (26%), Positives = 83/191 (44%), Gaps = 15/191 (7%)
Query 8 WTRNKLEILAGYLPAFNRASQTSRER-----IYLDLMAGQPENIDRDMGEKF-DGSSLIA 61
W+ +KL++LA YL A++ +E+ Y+D AG +D +++ GS L A
Sbjct 15 WSEDKLDLLAKYLEAYSIIMNKQKEKWLTKYYYIDAFAGSLRPRAKDDEKRYIKGSPLRA 74
Query 62 MKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRWA 121
++ +P F F +++ E L+ F D V G+ N + + L
Sbjct 75 LQIEPKFDGYWFIDISSQRIERIERLKDDF-SDCNIEVYHGNCNEVLCDQLIPKFNSSST 133
Query 122 PTFAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAEL--FIE 179
F F+D + WETI K+A R K ++++ S I R + IE
Sbjct 134 RAFVFLDPYGLSIDWETITKLANTR------KCDIFVNFSVMGITRILPKDREPKPEHIE 187
Query 180 QVTRMYGDADW 190
+ R+ G+ DW
Sbjct 188 LLNRVMGNTDW 198
>gi|45656300|ref|YP_000386.1| hypothetical protein LIC10400 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599534|gb|AAS69023.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length=275
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/192 (25%), Positives = 79/192 (42%), Gaps = 15/192 (7%)
Query 8 WTRNKLEILAGYLPAFNRASQT-SRERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADP 66
WT KLEI+ Y +F A + + + IY+D E I + EK DGS+L A+K P
Sbjct 14 WTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEKIDGSALRALKVTP 73
Query 67 PFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSN-VTIDETLAELGPWRWAPTFA 125
PF F +L L++ + G+SN V + + ++ F
Sbjct 74 PFHEYHFVDLEEKRVH---HLQSLVSSETNAYFHIGNSNKVLPAKVFPKFHYDKYERIFC 130
Query 126 FIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFI----EQV 181
+D + W+ + ++ T++ + + R V +N E E++
Sbjct 131 LLDPYKLTLDWDVVKAAG------KSKITDVLINFPVLDMNRNVLWSNNESISDNNREKM 184
Query 182 TRMYGDADWKRI 193
R +GD WK I
Sbjct 185 NRFWGDDSWKGI 196
>gi|281419210|ref|ZP_06250226.1| conserved hypothetical protein [Clostridium thermocellum JW20]
gi|281407076|gb|EFB37338.1| conserved hypothetical protein [Clostridium thermocellum JW20]
Length=281
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (27%), Positives = 84/187 (45%), Gaps = 14/187 (7%)
Query 8 WTRNKLEILAGYLPAFNRASQTS-RERIYLDLMAGQPENIDRDMGEKFDGSSLIAMKADP 66
WT KLE+L YL A+ + ++ IYLD AG + + +G DGS+ IA+ +
Sbjct 10 WTLIKLELLRKYLEAYAKVFKSKPFNLIYLDAFAGSGKCYTK-VG-LIDGSARIALGVE- 66
Query 67 PFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRWAPTFAF 126
F F E NP E L+ FP + + ++ GD N I+ + W F
Sbjct 67 RFNEYIFIENNPEFVENLKELKKEFP-NKKITIIQGDCNEEINSIIKSYD-WSKNRALGF 124
Query 127 IDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVK--GTNAELFIEQVTRM 184
+D ++ ++T+ K+A+ R ++W L R ++ G E++ +
Sbjct 125 LDPFNMQLSFDTLKKLASTRA------FDVWYLFPLHAATRCLRTDGKIQSSVQEKLDYL 178
Query 185 YGDADWK 191
+G +WK
Sbjct 179 FGSNNWK 185
>gi|220903511|ref|YP_002478823.1| hypothetical protein Ddes_0230 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867810|gb|ACL48145.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length=293
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query 8 WTRNKLEILAGYLPAFNRASQT------SRERIYLDLMAGQPENIDRDMGEKFDGSSLIA 61
W+ KL++L YL A+ + + + R Y+D AG ++D++ E +GS IA
Sbjct 10 WSIKKLDLLRNYLIAYTQIMTSEKIKSWCKSRHYVDAFAGATYHVDKESYELVEGSPRIA 69
Query 62 MKADPPFTRLRFCELNPLASELDV-ALRTRFPGDGRYRVV-AGDSNVTIDETLAELGPWR 119
+ +P F F +++ E + LR +P GD N + E + P
Sbjct 70 LNLEPGFDTYSFIDMDRRRIEDTIDPLRDEYPEKANNIFTHCGDCNQILTEKILPQFPQS 129
Query 120 -WAPT--FAFIDQQAAEVHWETINKVAAFR 146
+ P F F+D ++W T+ VA R
Sbjct 130 GFCPQRGFMFLDPYGINLNWSTVEAVANSR 159
>gi|337266796|ref|YP_004610851.1| hypothetical protein Mesop_2281 [Mesorhizobium opportunistum
WSM2075]
gi|336027106|gb|AEH86757.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=308
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/293 (25%), Positives = 116/293 (40%), Gaps = 65/293 (22%)
Query 9 TRNKLEILAGYLPAFNRASQTSR-ERIYLDLMAGQPENIDR---------DMGEKFD--- 55
T KL+ L YL AF+ A + IY+D AG + D E +
Sbjct 14 TSRKLKCLQEYLQAFSIALRNQDFACIYIDAFAGSGTRTEVRPGLPLFGPDFAEPEEITT 73
Query 56 -GSSLIAMKADPPFTRL--------RFCELNPLASELDVALRTRFPGDGRYRVVAGDSNV 106
GS+ IA++ DPP + RF EL L E +P D + V GD+N
Sbjct 74 PGSARIAIEIDPPMHSIVLIEQDTFRFSELQTLVEE--------YP-DRKIIVRNGDANK 124
Query 107 TIDETLAELGPWRWAPTFA-------FIDQQAAEVHWETINKVAAFRQNPRNLKTELWML 159
+ + L PWR + F+D EV WET+ +A + + W
Sbjct 125 LV-QRLCTNTPWRGSEIVGRGIRGVIFLDPYGMEVSWETVEAIA------KTEALDCWYF 177
Query 160 MSPTMIARGVKGTNAELFIEQ---VTRMYGDADWKRIQAARWRHHLTAP---------AY 207
+ + R A+L + + + R+ G +DW+ +RW +H A A
Sbjct 178 FPLSGLYRNAPHDPAKLDLGKQASLDRVLGASDWR----SRWYNHEIAREDIFETQGLAA 233
Query 208 RAEMVNLMR--VKLEYELGYKYSHRIPMQMH--NKVTIFDMVFATDHWAGDAI 256
R VN + VK E +K + P+++H N + + FA + + A+
Sbjct 234 RRADVNAIEAYVKERLETAFKGAVLDPVRLHHRNGAPLASLFFAVSNTSSAAV 286
>gi|256396026|ref|YP_003117590.1| hypothetical protein Caci_6913 [Catenulispora acidiphila DSM
44928]
gi|256362252|gb|ACU75749.1| hypothetical protein Caci_6913 [Catenulispora acidiphila DSM
44928]
Length=78
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (61%), Gaps = 0/46 (0%)
Query 2 AREWSYWTRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENID 47
A+ W +WT +KLEI YL AF A + + IYLDL AG P N D
Sbjct 26 AQPWGWWTGHKLEIPEDYLQAFTTADKKADALIYLDLFAGWPTNKD 71
>gi|119491179|ref|ZP_01623276.1| hypothetical protein L8106_25225 [Lyngbya sp. PCC 8106]
gi|119453520|gb|EAW34681.1| hypothetical protein L8106_25225 [Lyngbya sp. PCC 8106]
Length=291
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/155 (26%), Positives = 70/155 (46%), Gaps = 22/155 (14%)
Query 8 WTRNKLEILAGYLPAFNRA-SQTSRERIYLDLMAGQ----------------PENIDRDM 50
WT KL ++ YL A++ + + Y+D AG PE ++++
Sbjct 10 WTEEKLNRVSKYLKAYSTIMKEYNFTYAYIDAFAGTGYRTLKDEEEPNTLLLPELVEQES 69
Query 51 GEKFDGSSLIAMKADPPFTRLRFCELNP-LASELDVALRTRFPG-DGRYRVVAGDSNVTI 108
+ DGS+ IA++ P F + F E + +EL+ L+ FP R +V D+NV +
Sbjct 70 KKFLDGSARIALQIKPEFKKYIFIEKDENKVNELE-KLKIDFPNLSERISIVHSDANVYL 128
Query 109 DETLAELGPWRWAPTFAFIDQQAAEVHWETINKVA 143
+ + W+ F+D ++ WETI +A
Sbjct 129 KDLCRK--DWKTRRAVLFLDPFGMQIPWETIELIA 161
>gi|288932687|ref|YP_003436747.1| hypothetical protein Ferp_2354 [Ferroglobus placidus DSM 10642]
gi|288894935|gb|ADC66472.1| hypothetical protein Ferp_2354 [Ferroglobus placidus DSM 10642]
Length=343
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/195 (25%), Positives = 83/195 (43%), Gaps = 37/195 (18%)
Query 4 EWSYWTRNKLEILAGYLPAFNRASQTSRER-------IYLDLMAGQPENIDRDMGEKFDG 56
E+ WT KL L+ ++ + ++S E +Y+DL +G I++ G
Sbjct 39 EFKGWTPLKLVALSYFVQPYLNIIKSSLENKGMPTTLVYIDLFSGS--GINKVGRYALVG 96
Query 57 SSLIAM----KADPPFTRLRFCELN-PLASELDVALR-----------TRFPG------D 94
S +IA+ KA F L F + N A L+ L+ FP
Sbjct 97 SPIIAIDCATKAKRQFDYLFFVDNNREYAKSLEERLKFLESVEVHEQGKLFPEKKFSWIS 156
Query 95 GRYRVVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKT 154
G+Y V+ D+N+ ID+ +A L AF+D ++ W T+ K+ +
Sbjct 157 GKYEVLPKDANIAIDKIVAFLNKLSHKNYLAFLDPYKWQLEWRTLKKLLEIQYG------ 210
Query 155 ELWMLMSPTMIARGV 169
+L++ + T+IA+ +
Sbjct 211 DLFITLQATLIAKEI 225
>gi|218249044|ref|YP_002374415.1| hypothetical protein PCC8801_4337 [Cyanothece sp. PCC 8801]
gi|218169522|gb|ACK68259.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
Length=290
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/159 (25%), Positives = 68/159 (43%), Gaps = 11/159 (6%)
Query 35 YLDLMAGQPENIDRDMGEKFDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGD 94
Y+D AG + +D +GS L A+K +P F F +++ E L+ F D
Sbjct 47 YIDAFAGSVKPKAKDEERYIEGSPLRALKTEPKFDGYWFIDISTKRIERIEKLKEDF-RD 105
Query 95 GRYRVVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQNPRNLKT 154
V G+ N + L + F F+D + WETI K+ + K
Sbjct 106 CNIEVYQGNCNEILSNQLIPKFNSKSKRAFVFLDPYGLSIDWETIKKLGNTK------KC 159
Query 155 ELWM---LMSPTMIARGVKGTNAELFIEQVTRMYGDADW 190
++++ +M T I + ++E IE + ++ G+ DW
Sbjct 160 DIFVNFSIMGVTRILPRDQKPDSET-IELLDKIMGNTDW 197
>gi|288817610|ref|YP_003431957.1| putative bacteriophage protein [Hydrogenobacter thermophilus
TK-6]
gi|288787009|dbj|BAI68756.1| putative bacteriophage protein [Hydrogenobacter thermophilus
TK-6]
gi|308751208|gb|ADO44691.1| Gp37Gp68 family protein [Hydrogenobacter thermophilus TK-6]
Length=441
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/187 (28%), Positives = 82/187 (44%), Gaps = 26/187 (13%)
Query 15 ILAGYLPAFNRASQTSRER-IYLDLMAGQPENIDRDMGEKFDGSSLI-AMKADPPFTR-- 70
IL Y PA+ R ++ + IY+D AG GE +GS LI A KA+ +
Sbjct 16 ILEKYFPAWARILKSKHQTLIYVDCFAGSGR---YSSGE--EGSPLIVARKANELIEKDK 70
Query 71 -----LRFCELNPL-ASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELGPWRWAPTF 124
L F E N A EL+ L++ + + V DS+ + E L ++ + P F
Sbjct 71 SMKFYLIFVEKNKKSAQELEKQLKSYERENVKIFVFNEDSHDFVPELLEKIP--KNIPAF 128
Query 125 AFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGVKGTNAELFIEQVTRM 184
FID + INK+ + + + E+ + + I + AE + + RM
Sbjct 129 FFIDPYGHPLSIPVINKILSMQ------RKEILLNLMWYAINMHLNNPKAE---QTINRM 179
Query 185 YGDADWK 191
+G+ DWK
Sbjct 180 FGNTDWK 186
>gi|71275509|ref|ZP_00651795.1| Protein of unknown function DUF519 [Xylella fastidiosa Dixon]
gi|71900757|ref|ZP_00682878.1| Protein of unknown function DUF519 [Xylella fastidiosa Ann-1]
gi|170729282|ref|YP_001774715.1| transformation competence-related protein [Xylella fastidiosa
M12]
gi|71163809|gb|EAO13525.1| Protein of unknown function DUF519 [Xylella fastidiosa Dixon]
gi|71729487|gb|EAO31597.1| Protein of unknown function DUF519 [Xylella fastidiosa Ann-1]
gi|167964075|gb|ACA11085.1| transformation competence-related protein [Xylella fastidiosa
M12]
Length=293
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/128 (29%), Positives = 57/128 (45%), Gaps = 13/128 (10%)
Query 9 TRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMG-------EKFDGSSLIA 61
+RN E +G + R + + Y+D++ Q +N+ + ++ GSSL+A
Sbjct 54 SRNTSEAESGVMRLIARPQRLEVIKRYVDVV--QADNVSQTRAASTPMHISRYPGSSLLA 111
Query 62 MKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETL-AELGPWRW 120
+ R+ FCEL+P + AL F D R RV AGD + L ++G R
Sbjct 112 AQVCRAQDRMVFCELHPKEA---AALNALFVHDPRVRVHAGDGYAAVRAFLPPKVGTQRI 168
Query 121 APTFAFID 128
FID
Sbjct 169 GRGLVFID 176
>gi|71899711|ref|ZP_00681863.1| Protein of unknown function DUF519 [Xylella fastidiosa Ann-1]
gi|71730506|gb|EAO32585.1| Protein of unknown function DUF519 [Xylella fastidiosa Ann-1]
Length=293
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/128 (29%), Positives = 57/128 (45%), Gaps = 13/128 (10%)
Query 9 TRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMG-------EKFDGSSLIA 61
+RN E +G + R + + Y+D++ Q +N+ + ++ GSSL+A
Sbjct 54 SRNTREAESGVMRLIARPQRLEVIKRYVDVV--QADNVSQTRAASTPMHISRYPGSSLLA 111
Query 62 MKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETL-AELGPWRW 120
+ R+ FCEL+P + AL F D R RV AGD + L ++G R
Sbjct 112 AQVCRAQDRMVFCELHPKEA---AALNALFVHDPRVRVHAGDGYTAVRAFLPPKVGTQRI 168
Query 121 APTFAFID 128
FID
Sbjct 169 GRGLVFID 176
>gi|28197975|ref|NP_778289.1| transformation competence-related protein [Xylella fastidiosa
Temecula1]
gi|182680601|ref|YP_001828761.1| hypothetical protein XfasM23_0029 [Xylella fastidiosa M23]
gi|28056035|gb|AAO27938.1| transformation competence-related protein [Xylella fastidiosa
Temecula1]
gi|182630711|gb|ACB91487.1| protein of unknown function DUF519 [Xylella fastidiosa M23]
gi|307579057|gb|ADN63026.1| hypothetical protein XFLM_05390 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338180191|gb|EGO83087.1| Protein involved in catabolism of external DNA [Xylella fastidiosa
EB92.1]
Length=293
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/128 (29%), Positives = 57/128 (45%), Gaps = 13/128 (10%)
Query 9 TRNKLEILAGYLPAFNRASQTSRERIYLDLMAGQPENIDRDMG-------EKFDGSSLIA 61
+RN E +G + R + + Y+D++ Q +N+ + ++ GSSL+A
Sbjct 54 SRNTREAESGVMRLIARPQRLEVIKRYVDVV--QADNVSQTRAASTPMHISRYPGSSLLA 111
Query 62 MKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETL-AELGPWRW 120
+ R+ FCEL+P + AL F D R RV AGD + L ++G R
Sbjct 112 AQVCRAQDRMVFCELHPKEA---AALNALFVHDPRVRVHAGDGYAAVRAFLPPKVGTQRI 168
Query 121 APTFAFID 128
FID
Sbjct 169 GRGLVFID 176
>gi|66767744|ref|YP_242506.1| hypothetical protein XC_1418 [Xanthomonas campestris pv. campestris
str. 8004]
gi|66573076|gb|AAY48486.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. 8004]
Length=302
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 30/55 (55%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P ++ AL+T F D R RV AGD I
Sbjct 113 YPGSPLLAAQALRAQDRMAFCELQPDEAQ---ALKTLFANDSRVRVHAGDGYAAI 164
>gi|341937782|gb|AEL07921.1| protein involved in catabolism of external DNA [Xanthomonas campestris
pv. raphani 756C]
Length=302
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 30/55 (55%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P ++ AL+T F D R RV AGD I
Sbjct 113 YPGSPLLAAQALRAQDRMAFCELQPDEAQ---ALKTLFANDSRVRVHAGDGYAAI 164
>gi|21232127|ref|NP_638044.1| hypothetical protein XCC2696 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21113876|gb|AAM41968.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length=302
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 30/55 (55%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P ++ AL+T F D R RV AGD I
Sbjct 113 YPGSPLLAAQALRAQDRMAFCELQPDEAQ---ALKTLFANDSRVRVHAGDGYAAI 164
>gi|188990861|ref|YP_001902871.1| hypothetical protein xccb100_1465 [Xanthomonas campestris pv.
campestris str. B100]
gi|167732621|emb|CAP50815.1| Conserved hypothetical protein [Xanthomonas campestris pv. campestris]
Length=328
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 30/55 (55%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P ++ AL+T F D R RV AGD I
Sbjct 139 YPGSPLLAAQALRAQDRMAFCELQPDEAQ---ALKTLFANDSRVRVHAGDGYAAI 190
>gi|118593654|ref|ZP_01551030.1| hypothetical protein SIAM614_21390 [Stappia aggregata IAM 12614]
gi|118433765|gb|EAV40426.1| hypothetical protein SIAM614_21390 [Stappia aggregata IAM 12614]
Length=301
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/236 (26%), Positives = 91/236 (39%), Gaps = 34/236 (14%)
Query 9 TRNKLEILAGYLPAFNRASQTSR-ERIYLDLMAGQPENID---------RDMGE--KFDG 56
T KL L YL A++ A Q IY+D AG + RD E K G
Sbjct 11 TGRKLNALRQYLQAYSIALQDQGFATIYIDAFAGSGTRTETVPALPLFGRDSPEELKTPG 70
Query 57 SSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTIDETLAELG 116
S+ IA++ +PPF L E +P + LR P D + + GD+N + L +
Sbjct 71 SARIALEVNPPFHTLALFEADPDRFKQLSQLRAEHP-DRKVVLRHGDANDFV-RRLCKGV 128
Query 117 PWRWAPT-------FAFIDQQAAEVHWETINKVAAFRQNPRNLKTELWMLMSPTMIARGV 169
PW + F+D EV W+T +AA + W + + R
Sbjct 129 PWHAKQSGLKGMRGVVFLDPYGMEVEWKTAEAIAA------TEALDCWYFFPLSGLYRNA 182
Query 170 KGTNAELFIEQ---VTRMYGDADWKRIQAARWRHHLTAPAYRAEMVNLMRVKLEYE 222
+L + + R+ G DW++ W H AP E N V+ + +
Sbjct 183 PHNPTKLDASKQASLDRVLGTTDWRQC----WYDHSIAPETLFETENEAIVRADVD 234
>gi|21243583|ref|NP_643165.1| hypothetical protein XAC2856 [Xanthomonas axonopodis pv. citri
str. 306]
gi|21109153|gb|AAM37701.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length=302
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 29/55 (53%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P +E AL+ F D R RV AGD I
Sbjct 113 YPGSPLLAAQALREQDRMAFCELQPDEAE---ALKALFARDSRVRVHAGDGYAAI 164
>gi|325916550|ref|ZP_08178816.1| protein involved in catabolism of external DNA [Xanthomonas vesicatoria
ATCC 35937]
gi|325537223|gb|EGD08953.1| protein involved in catabolism of external DNA [Xanthomonas vesicatoria
ATCC 35937]
Length=302
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 29/55 (53%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P +E AL+ F D R RV AGD I
Sbjct 113 YPGSPLLAAQALREQDRMAFCELQPDEAE---ALKGLFAKDSRVRVHAGDGYAAI 164
>gi|302527943|ref|ZP_07280285.1| 1,4-alpha-glucan branching enzyme [Streptomyces sp. AA4]
gi|302436838|gb|EFL08654.1| 1,4-alpha-glucan branching enzyme [Streptomyces sp. AA4]
Length=736
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 40/99 (41%), Gaps = 12/99 (12%)
Query 38 LMAGQPENIDRDMGEKFDGSSLIAMKADPPFTRL------RFCELNPLASELDVALRTRF 91
L+AG+ + +G DGS ++ P T + R L +A L A
Sbjct 24 LLAGEHHDPHSVLGVHTDGSDIVVRALRPGATSVSVVAGERRVPLERVADALFAATLPEH 83
Query 92 PGDGRYRVVAGDSNVTIDETLAELGPWRWAPTFAFIDQQ 130
PGD R V + V D+ P+RW PT +DQ
Sbjct 84 PGDYRIEVGYDNHTVVADD------PYRWLPTVGELDQH 116
>gi|294793334|ref|ZP_06758479.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
6_1_27]
gi|294455765|gb|EFG24130.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
6_1_27]
gi|333975839|gb|EGL76716.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
ACS-068-V-Sch12]
Length=1066
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 22/76 (29%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQ----NPRNLKT 154
V+A +N T++E A+ W PT+ ++D AAE +T +A+ Q P K+
Sbjct 492 VIARYANTTVEEVRAKRKEWNILPTYKYVDTCAAEFESKTPYYYSAYAQEDEVKPLGEKS 551
Query 155 ELWMLMSPTMIARGVK 170
+ + P I +GV+
Sbjct 552 VVVLGSGPIRIGQGVE 567
>gi|282850076|ref|ZP_06259458.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
ATCC 17745]
gi|282580265|gb|EFB85666.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
ATCC 17745]
Length=1066
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 22/76 (29%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQ----NPRNLKT 154
V+A +N T++E A+ W PT+ ++D AAE +T +A+ Q P K+
Sbjct 492 VIARYANTTVEEVRAKRKEWNILPTYKYVDTCAAEFESKTPYYYSAYAQEDEVKPLGEKS 551
Query 155 ELWMLMSPTMIARGVK 170
+ + P I +GV+
Sbjct 552 VVVLGSGPIRIGQGVE 567
>gi|16263662|ref|NP_436455.1| hypothetical protein SMa2243 [Sinorhizobium meliloti 1021]
gi|14524375|gb|AAK65867.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length=308
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 42/165 (26%), Positives = 67/165 (41%), Gaps = 23/165 (13%)
Query 1 MAREWSYWTRNKLEILAGYLPAFNRASQTSRER-IYLDLMAG----------QP------ 43
M E W + KL+ILA YL + + + R IY+D AG +P
Sbjct 10 MVAEVGPWAKEKLDILARYLDFYTKVLKNQPWRTIYIDAFAGGGSAKVRIKNEPAATFDL 69
Query 44 -ENIDRDMGEK---FDGSSLIAMKADPPFTRLRFCE-LNPLASELDVALRTRFPGDGRYR 98
E D GE+ GS +A+ PF+R FCE A EL+ L F + +
Sbjct 70 LEPTDSQDGEQEEFLHGSPRVALDIANPFSRYVFCEPAAKRAVELN-ELEAEFSNSRQIK 128
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVA 143
++ + I ++ + AF+D A + W ++ +A
Sbjct 129 LLKVPAAEGIAWVTSQAISKKTHRGVAFLDPFGARLEWSSVQSLA 173
>gi|238019707|ref|ZP_04600133.1| hypothetical protein VEIDISOL_01582 [Veillonella dispar ATCC
17748]
gi|237863748|gb|EEP65038.1| hypothetical protein VEIDISOL_01582 [Veillonella dispar ATCC
17748]
Length=1066
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 22/76 (29%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query 99 VVAGDSNVTIDETLAELGPWRWAPTFAFIDQQAAEVHWETINKVAAFRQ----NPRNLKT 154
V+A +N T++E A+ W PT+ ++D AAE +T +A+ Q P K+
Sbjct 492 VIARYANTTVEEVRAKRKEWNILPTYKYVDTCAAEFESKTPYYYSAYAQEDEVKPLGEKS 551
Query 155 ELWMLMSPTMIARGVK 170
+ + P I +GV+
Sbjct 552 VVVLGSGPIRIGQGVE 567
>gi|325921175|ref|ZP_08183043.1| protein involved in catabolism of external DNA [Xanthomonas gardneri
ATCC 19865]
gi|325548345|gb|EGD19331.1| protein involved in catabolism of external DNA [Xanthomonas gardneri
ATCC 19865]
Length=318
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/55 (42%), Positives = 29/55 (53%), Gaps = 3/55 (5%)
Query 54 FDGSSLIAMKADPPFTRLRFCELNPLASELDVALRTRFPGDGRYRVVAGDSNVTI 108
+ GS L+A +A R+ FCEL P +E AL+ F D R RV AGD I
Sbjct 129 YPGSPLLAAQALREQDRMAFCELQPEEAE---ALKRLFAKDSRVRVHAGDGYEAI 180
Lambda K H
0.320 0.133 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 586667724920
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40