BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2736c
Length=174
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842275|ref|NP_337312.1| recombination regulator RecX [Mycob... 337 3e-91
gi|15609873|ref|NP_217252.1| recombination regulator RecX [Mycob... 337 4e-91
gi|289758863|ref|ZP_06518241.1| recombination regulator RecX [My... 335 1e-90
gi|289575433|ref|ZP_06455660.1| regulatory protein recX [Mycobac... 334 3e-90
gi|340627736|ref|YP_004746188.1| regulatorY protein RECX [Mycoba... 333 4e-90
gi|339295590|gb|AEJ47701.1| recombination regulator RecX [Mycoba... 333 8e-90
gi|254232835|ref|ZP_04926162.1| regulatory protein recX [Mycobac... 306 7e-82
gi|118618696|ref|YP_907028.1| recombination regulator RecX [Myco... 271 2e-71
gi|254776065|ref|ZP_05217581.1| recombination regulator RecX [My... 270 5e-71
gi|161611202|ref|NP_961781.2| recombination regulator RecX [Myco... 270 9e-71
gi|118462254|ref|YP_882803.1| recombination regulator RecX [Myco... 269 9e-71
gi|342858399|ref|ZP_08715054.1| recombination regulator RecX [My... 268 2e-70
gi|254821761|ref|ZP_05226762.1| recombination regulator RecX [My... 263 6e-69
gi|296171750|ref|ZP_06852909.1| recombination regulator RecX [My... 260 6e-68
gi|15827470|ref|NP_301733.1| recombination regulator RecX [Mycob... 258 3e-67
gi|41397304|gb|AAS05164.1| RecX [Mycobacterium avium subsp. para... 234 3e-60
gi|333991122|ref|YP_004523736.1| regulatory protein RecX [Mycoba... 233 1e-59
gi|120403411|ref|YP_953240.1| recombination regulator RecX [Myco... 215 2e-54
gi|108799115|ref|YP_639312.1| recombination regulator RecX [Myco... 210 7e-53
gi|126434721|ref|YP_001070412.1| recombination regulator RecX [M... 209 1e-52
gi|145224555|ref|YP_001135233.1| recombination regulator RecX [M... 207 6e-52
gi|315444886|ref|YP_004077765.1| hypothetical protein Mspyr1_331... 206 8e-52
gi|240171188|ref|ZP_04749847.1| recombination regulator RecX [My... 204 5e-51
gi|118473993|ref|YP_887058.1| recombination regulator RecX [Myco... 203 8e-51
gi|169630142|ref|YP_001703791.1| recombination regulator RecX [M... 170 9e-41
gi|226366161|ref|YP_002783944.1| recombination regulator RecX [R... 145 2e-33
gi|226306241|ref|YP_002766201.1| regulatory protein RecX [Rhodoc... 144 6e-33
gi|111023724|ref|YP_706696.1| recombination regulator RecX [Rhod... 141 3e-32
gi|229490855|ref|ZP_04384690.1| regulatory protein RecX [Rhodoco... 141 3e-32
gi|289751390|ref|ZP_06510768.1| regulatory protein recX [Mycobac... 140 9e-32
gi|312139382|ref|YP_004006718.1| recx regulatory protein [Rhodoc... 137 5e-31
gi|325672737|ref|ZP_08152433.1| recombination regulator RecX [Rh... 137 8e-31
gi|324997717|ref|ZP_08118829.1| recombination regulator RecX [Ps... 127 5e-28
gi|345009759|ref|YP_004812113.1| Regulatory protein recX [Strept... 124 7e-27
gi|119716569|ref|YP_923534.1| regulatory protein RecX [Nocardioi... 117 7e-25
gi|331698362|ref|YP_004334601.1| Regulatory protein recX [Pseudo... 117 8e-25
gi|257056757|ref|YP_003134589.1| hypothetical protein Svir_27810... 117 9e-25
gi|302542079|ref|ZP_07294421.1| RecX protein [Streptomyces hygro... 116 1e-24
gi|54025811|ref|YP_120053.1| recombination regulator RecX [Nocar... 115 2e-24
gi|297156747|gb|ADI06459.1| recombination regulator RecX [Strept... 115 2e-24
gi|72161208|ref|YP_288865.1| recombination regulator RecX [Therm... 114 4e-24
gi|161511222|ref|NP_823667.2| recombination regulator RecX [Stre... 114 4e-24
gi|302537317|ref|ZP_07289659.1| regulatory protein recX [Strepto... 114 5e-24
gi|329939951|ref|ZP_08289233.1| recombination regulator RecX [St... 114 7e-24
gi|29606139|dbj|BAC70202.1| putative regulatory protein RecX [St... 113 1e-23
gi|294631805|ref|ZP_06710365.1| regulatory protein RecX [Strepto... 112 3e-23
gi|291301647|ref|YP_003512925.1| regulatory protein RecX [Stacke... 111 3e-23
gi|345002450|ref|YP_004805304.1| regulatory protein RecX [Strept... 111 4e-23
gi|284992304|ref|YP_003410858.1| regulatory protein RecX [Geoder... 111 4e-23
gi|302522275|ref|ZP_07274617.1| regulatory protein recX [Strepto... 110 6e-23
>gi|15842275|ref|NP_337312.1| recombination regulator RecX [Mycobacterium tuberculosis CDC1551]
gi|289553480|ref|ZP_06442690.1| regulatory protein recX [Mycobacterium tuberculosis KZN 605]
gi|308232231|ref|ZP_07415350.2| regulatory protein recX [Mycobacterium tuberculosis SUMu001]
25 more sequence titles
Length=178
Score = 337 bits (865), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG
Sbjct 5 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 64
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 65 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 124
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 125 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 178
>gi|15609873|ref|NP_217252.1| recombination regulator RecX [Mycobacterium tuberculosis H37Rv]
gi|31793908|ref|NP_856401.1| recombination regulator RecX [Mycobacterium bovis AF2122/97]
gi|121638611|ref|YP_978835.1| recombination regulator RecX [Mycobacterium bovis BCG str. Pasteur
1173P2]
43 more sequence titles
Length=174
Score = 337 bits (863), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG
Sbjct 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|289758863|ref|ZP_06518241.1| recombination regulator RecX [Mycobacterium tuberculosis T85]
gi|294994175|ref|ZP_06799866.1| recombination regulator RecX [Mycobacterium tuberculosis 210]
gi|289714427|gb|EFD78439.1| recombination regulator RecX [Mycobacterium tuberculosis T85]
gi|326904351|gb|EGE51284.1| regulatory protein recX [Mycobacterium tuberculosis W-148]
gi|339299208|gb|AEJ51318.1| recombination regulator RecX [Mycobacterium tuberculosis CCDC5180]
Length=174
Score = 335 bits (860), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/174 (99%), Positives = 174/174 (100%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA+G
Sbjct 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAALG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|289575433|ref|ZP_06455660.1| regulatory protein recX [Mycobacterium tuberculosis K85]
gi|289539864|gb|EFD44442.1| regulatory protein recX [Mycobacterium tuberculosis K85]
Length=174
Score = 334 bits (856), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/174 (99%), Positives = 173/174 (99%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPP TSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG
Sbjct 1 MTVSCPPPLTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|340627736|ref|YP_004746188.1| regulatorY protein RECX [Mycobacterium canettii CIPT 140010059]
gi|340005926|emb|CCC45093.1| regulatorY protein RECX [Mycobacterium canettii CIPT 140010059]
Length=174
Score = 333 bits (855), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/174 (99%), Positives = 172/174 (99%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG
Sbjct 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANA KSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAGKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRRE LIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREALIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|339295590|gb|AEJ47701.1| recombination regulator RecX [Mycobacterium tuberculosis CCDC5079]
Length=174
Score = 333 bits (853), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/174 (99%), Positives = 173/174 (99%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPE IGNRVLDRLAA+G
Sbjct 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEGIGNRVLDRLAALG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|254232835|ref|ZP_04926162.1| regulatory protein recX [Mycobacterium tuberculosis C]
gi|124601894|gb|EAY60904.1| regulatory protein recX [Mycobacterium tuberculosis C]
Length=174
Score = 306 bits (784), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 161/174 (93%), Positives = 161/174 (93%), Gaps = 0/174 (0%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MTVSCPPPSTSER ARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG
Sbjct 1 MTVSCPPPSTSERRRAGAGTVPAPAHARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV
Sbjct 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV
Sbjct 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
>gi|118618696|ref|YP_907028.1| recombination regulator RecX [Mycobacterium ulcerans Agy99]
gi|183981992|ref|YP_001850283.1| regulatory protein RecX [Mycobacterium marinum M]
gi|166918765|sp|A0PT88.1|RECX_MYCUA RecName: Full=Regulatory protein recX
gi|226739041|sp|B2HL07.1|RECX_MYCMM RecName: Full=Regulatory protein recX
gi|118570806|gb|ABL05557.1| regulatory protein RecX [Mycobacterium ulcerans Agy99]
gi|183175318|gb|ACC40428.1| regulatory protein RecX [Mycobacterium marinum M]
Length=173
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/176 (83%), Positives = 156/176 (89%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MTVS PPPSTSE REEQARALCLRLLTARSRTRAELAGQLAKRGYPED+G+RVLDRL A
Sbjct 1 MTVSFPPPSTSEPSREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDVGDRVLDRLTA 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGLVDD DFA WVQSRRANA KS+RALAAEL AKGVD DVI T L G+DAGAERGRAE+
Sbjct 61 VGLVDDADFAADWVQSRRANAGKSRRALAAELQAKGVDQDVIGTALAGLDAGAERGRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVR +LRRE L + D+ARV+RRLVAMLARRGY QT+ACEVVIAELAAER+RRRV
Sbjct 121 LVRTKLRREKLTE---DDARVTRRLVAMLARRGYSQTVACEVVIAELAAERDRRRV 173
>gi|254776065|ref|ZP_05217581.1| recombination regulator RecX [Mycobacterium avium subsp. avium
ATCC 25291]
Length=173
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/176 (80%), Positives = 154/176 (88%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPSTSE REEQARALCLRLLTAR+RTRAEL GQLAKRGYP+D+ VLDRLAA
Sbjct 1 MTASCPPPSTSEPSREEQARALCLRLLTARARTRAELHGQLAKRGYPDDVSTAVLDRLAA 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGL+DD DFA+QWVQSRRA+A KSKRALAAELH KGVD+DVIT+VL GIDAGAER RAE+
Sbjct 61 VGLIDDADFAQQWVQSRRAHAGKSKRALAAELHTKGVDNDVITSVLAGIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVR++LRRE L +D ARV+RRLV MLARRGY Q LACEVV+AELA ERERRRV
Sbjct 121 LVRSKLRRETLAEDN---ARVTRRLVGMLARRGYSQNLACEVVLAELATERERRRV 173
>gi|161611202|ref|NP_961781.2| recombination regulator RecX [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458946|gb|EGO37901.1| hypothetical protein MAPs_08290 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=173
Score = 270 bits (689), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 140/176 (80%), Positives = 156/176 (89%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPSTSE REEQARALCLRLLTAR+RTRAEL G+LAKRGYP+D+ VLDRLAA
Sbjct 1 MTASCPPPSTSEPSREEQARALCLRLLTARARTRAELHGRLAKRGYPDDVSTAVLDRLAA 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGL+DD DFA+QWVQSRRA+A KSKRALAAELH KGVD+DVIT+VL GIDAGAER RAE+
Sbjct 61 VGLIDDADFAQQWVQSRRAHAGKSKRALAAELHTKGVDNDVITSVLAGIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVR++LRRE L + D+ARV+RRLV MLARRGY Q LACEVV+AELAAERERRRV
Sbjct 121 LVRSKLRRETLAE---DDARVTRRLVGMLARRGYSQNLACEVVLAELAAERERRRV 173
>gi|118462254|ref|YP_882803.1| recombination regulator RecX [Mycobacterium avium 104]
gi|166918762|sp|A0QIR5.1|RECX_MYCA1 RecName: Full=Regulatory protein recX
gi|118163541|gb|ABK64438.1| regulatory protein RecX [Mycobacterium avium 104]
Length=173
Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 140/176 (80%), Positives = 155/176 (89%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPSTSE REEQARALCLRLLTAR+RTRAEL G+LAKRGYP+D+ VLDRLAA
Sbjct 1 MTASCPPPSTSEPSREEQARALCLRLLTARARTRAELHGRLAKRGYPDDVSTAVLDRLAA 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGL+DD DFA+QWVQSRRA+A KSKRALAAELH KGVD+DVIT+VL GIDAGAER RAE+
Sbjct 61 VGLIDDADFAQQWVQSRRAHAGKSKRALAAELHTKGVDNDVITSVLAGIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVR++LRRE L D+ARV+RRLV MLARRGY Q LACEVV+AELAAERERRRV
Sbjct 121 LVRSKLRRETL---AQDDARVTRRLVGMLARRGYSQNLACEVVLAELAAERERRRV 173
>gi|342858399|ref|ZP_08715054.1| recombination regulator RecX [Mycobacterium colombiense CECT
3035]
gi|342134103|gb|EGT87283.1| recombination regulator RecX [Mycobacterium colombiense CECT
3035]
Length=173
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/176 (79%), Positives = 154/176 (88%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPSTSE REEQARALCLRLLTAR+RTRAEL G+LAKRGYPED+ RVLDRLA+
Sbjct 1 MTTSCPPPSTSEPSREEQARALCLRLLTARARTRAELHGRLAKRGYPEDVSARVLDRLAS 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGL+DD DFA+QWV+SRRA+A KSKRALAAELH KGVD+DVIT L GIDAGAER RAE+
Sbjct 61 VGLIDDADFAQQWVRSRRAHAGKSKRALAAELHTKGVDNDVITAALAGIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVR++LRRE L D D+ARV+RRLV MLARRGY Q +ACEVV AELAAERERRRV
Sbjct 121 LVRSKLRRETLND---DDARVTRRLVGMLARRGYSQNMACEVVFAELAAERERRRV 173
>gi|254821761|ref|ZP_05226762.1| recombination regulator RecX [Mycobacterium intracellulare ATCC
13950]
Length=173
Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/176 (79%), Positives = 153/176 (87%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPS S+ REEQARALCLRLLTAR+RTRAEL G+L +RGYP D+ RVLDRLA+
Sbjct 1 MTASCPPPSISDPSREEQARALCLRLLTARARTRAELRGRLTQRGYPADVSERVLDRLAS 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGL+DDTDFA+QWV+SRRA+A KSKRALAAELH KGVD+DVITTVL IDAGAER RAE+
Sbjct 61 VGLIDDTDFAQQWVRSRRAHAGKSKRALAAELHTKGVDNDVITTVLADIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVRA+LRRE L D D+ARV+RRLV MLARRGY Q LACEVV AELAAERERRRV
Sbjct 121 LVRAKLRRETLND---DDARVTRRLVGMLARRGYSQNLACEVVFAELAAERERRRV 173
>gi|296171750|ref|ZP_06852909.1| recombination regulator RecX [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295893979|gb|EFG73744.1| recombination regulator RecX [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=173
Score = 260 bits (664), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/176 (81%), Positives = 149/176 (85%), Gaps = 5/176 (2%)
Query 1 MTVSCPPPSTSE--REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
MT SCPPPS SE REEQAR LCLRLLTAR+RTRAEL GQLAKRGYPED+ VLDRLAA
Sbjct 1 MTASCPPPSISEPSREEQARTLCLRLLTARARTRAELHGQLAKRGYPEDVSASVLDRLAA 60
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGLVDDTDFA+QWV SRRA A KSKRALAAEL KGVD DVI T L GIDAGAER RAE+
Sbjct 61 VGLVDDTDFAQQWVASRRATAGKSKRALAAELRTKGVDRDVIATALSGIDAGAERDRAEQ 120
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
LVRA+LRRE L DG D+A+V+RRLV MLARRGY Q LACEVVIAEL AERERRRV
Sbjct 121 LVRAKLRRETL--DG-DDAKVTRRLVGMLARRGYSQNLACEVVIAELVAERERRRV 173
>gi|15827470|ref|NP_301733.1| recombination regulator RecX [Mycobacterium leprae TN]
gi|221229947|ref|YP_002503363.1| recombination regulator RecX [Mycobacterium leprae Br4923]
gi|585805|sp|P37859.1|RECX_MYCLE RecName: Full=Regulatory protein recX
gi|254790825|sp|B8ZQT6.1|RECX_MYCLB RecName: Full=Regulatory protein recX
gi|467081|gb|AAA17264.1| u2235b [Mycobacterium leprae]
gi|13093020|emb|CAC31369.1| putative regulatory protein RecX [Mycobacterium leprae]
gi|219933054|emb|CAR71083.1| putative regulatory protein RecX [Mycobacterium leprae Br4923]
Length=171
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/174 (78%), Positives = 147/174 (85%), Gaps = 3/174 (1%)
Query 1 MTVSCPPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVG 60
MT SCPPPS S+REEQAR LCLRLLTARSRTRA+L GQLAKRGY + + RVLDRLAAVG
Sbjct 1 MTTSCPPPSISDREEQARILCLRLLTARSRTRAQLFGQLAKRGYADHVSERVLDRLAAVG 60
Query 61 LVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLV 120
L+DD DFAEQWV+SRRAN KSKRALAA+L AKG+D +VITTVL GID ER RAE+LV
Sbjct 61 LLDDNDFAEQWVRSRRANVGKSKRALAADLRAKGIDSEVITTVLAGIDPAVERERAEQLV 120
Query 121 RARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
R RLRREVL D+ARVSRRL+AMLARRGY QT CEVV+AELAAERERRRV
Sbjct 121 RTRLRREVL---SEDDARVSRRLMAMLARRGYSQTTICEVVVAELAAERERRRV 171
>gi|41397304|gb|AAS05164.1| RecX [Mycobacterium avium subsp. paratuberculosis K-10]
Length=152
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/155 (79%), Positives = 138/155 (90%), Gaps = 3/155 (1%)
Query 20 LCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQSRRANA 79
+CLRLLTAR+RTRAEL G+LAKRGYP+D+ VLDRLAAVGL+DD DFA+QWVQSRRA+A
Sbjct 1 MCLRLLTARARTRAELHGRLAKRGYPDDVSTAVLDRLAAVGLIDDADFAQQWVQSRRAHA 60
Query 80 AKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGTDEARV 139
KSKRALAAELH KGVD+DVIT+VL GIDAGAER RAE+LVR++LRRE L + D+ARV
Sbjct 61 GKSKRALAAELHTKGVDNDVITSVLAGIDAGAERDRAEQLVRSKLRRETLAE---DDARV 117
Query 140 SRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
+RRLV MLARRGY Q LACEVV+AELAAERERRRV
Sbjct 118 TRRLVGMLARRGYSQNLACEVVLAELAAERERRRV 152
>gi|333991122|ref|YP_004523736.1| regulatory protein RecX [Mycobacterium sp. JDM601]
gi|333487090|gb|AEF36482.1| regulatory protein RecX [Mycobacterium sp. JDM601]
Length=178
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/180 (70%), Positives = 143/180 (80%), Gaps = 11/180 (6%)
Query 3 VSCPPPSTSE--------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLD 54
S PPPSTSE REEQA+ALCLRLLTAR+RTRAELAGQL+KRGYP+D+ RVLD
Sbjct 2 TSFPPPSTSEPTEVNPAKREEQAKALCLRLLTARARTRAELAGQLSKRGYPDDVSTRVLD 61
Query 55 RLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERG 114
RLA GL+DD DFA QWV+SRR A K ++ LAAEL KGVD+DVI L GIDAGAERG
Sbjct 62 RLATAGLIDDADFAAQWVRSRRERAGKGRKVLAAELRTKGVDEDVIAGALAGIDAGAERG 121
Query 115 RAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
RAE+LV+++LRRE L G D+ RV+RRLVAMLARRGY +LA +VV AELAAERERRRV
Sbjct 122 RAEQLVQSKLRRETL---GEDDLRVTRRLVAMLARRGYSPSLAYDVVSAELAAERERRRV 178
>gi|120403411|ref|YP_953240.1| recombination regulator RecX [Mycobacterium vanbaalenii PYR-1]
gi|189040060|sp|A1T7T4.1|RECX_MYCVP RecName: Full=Regulatory protein recX
gi|119956229|gb|ABM13234.1| regulatory protein RecX [Mycobacterium vanbaalenii PYR-1]
Length=184
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/185 (68%), Positives = 139/185 (76%), Gaps = 12/185 (6%)
Query 1 MTVSCPPPSTSE---------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNR 51
MT+ P PSTS+ R EQARALCLRLLTAR+RTRAEL LAKRGYP+DI
Sbjct 1 MTL-FPLPSTSDPAEADESTKRGEQARALCLRLLTARARTRAELEAALAKRGYPDDIAAA 59
Query 52 VLDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGA 111
VLDRL VGLVDD DFAEQWV+SRR NA K KRALAAEL KGVD++VI L GIDAGA
Sbjct 60 VLDRLTQVGLVDDEDFAEQWVRSRRLNAGKGKRALAAELRKKGVDNEVIDGALAGIDAGA 119
Query 112 ERGRAEKLVRARLRREVL--IDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAER 169
ER RAE+LVR +LRRE L DD E +V+RRLV MLARRGY QT+A +VV AELA ER
Sbjct 120 ERTRAEQLVRDKLRREKLGDPDDRDAENKVARRLVGMLARRGYNQTMAFDVVTAELANER 179
Query 170 ERRRV 174
ERR+V
Sbjct 180 ERRKV 184
>gi|108799115|ref|YP_639312.1| recombination regulator RecX [Mycobacterium sp. MCS]
gi|119868230|ref|YP_938182.1| recombination regulator RecX [Mycobacterium sp. KMS]
gi|123070288|sp|Q1BA28.1|RECX_MYCSS RecName: Full=Regulatory protein recX
gi|189040059|sp|A1UEY4.1|RECX_MYCSK RecName: Full=Regulatory protein recX
gi|108769534|gb|ABG08256.1| regulatory protein RecX [Mycobacterium sp. MCS]
gi|119694319|gb|ABL91392.1| regulatory protein RecX [Mycobacterium sp. KMS]
Length=183
Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/182 (65%), Positives = 133/182 (74%), Gaps = 10/182 (5%)
Query 3 VSCPPPSTSE----------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRV 52
S P PSTSE REEQA A CLRLLTAR+RTRAELAG+L +RGY E + RV
Sbjct 2 TSFPHPSTSESGPDPDSEPNREEQAHAYCLRLLTARARTRAELAGKLTQRGYDEPVVARV 61
Query 53 LDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAE 112
LDRL VGLVDD DFAEQWV+SR A K KRALAAEL KGVDD+VI++ L IDAGAE
Sbjct 62 LDRLVDVGLVDDEDFAEQWVRSRHLYAGKGKRALAAELRRKGVDDEVISSSLADIDAGAE 121
Query 113 RGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERR 172
R RAE+LVR RLRRE L D+ + +V RRL MLARRGY Q++A +VV ELA ERERR
Sbjct 122 RDRAERLVRDRLRREKLDDEPGSDLKVKRRLAGMLARRGYSQSMALDVVTVELAGERERR 181
Query 173 RV 174
RV
Sbjct 182 RV 183
>gi|126434721|ref|YP_001070412.1| recombination regulator RecX [Mycobacterium sp. JLS]
gi|189039871|sp|A3PYE4.1|RECX_MYCSJ RecName: Full=Regulatory protein recX
gi|126234521|gb|ABN97921.1| regulatory protein RecX [Mycobacterium sp. JLS]
Length=183
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/182 (64%), Positives = 133/182 (74%), Gaps = 10/182 (5%)
Query 3 VSCPPPSTSE----------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRV 52
S P PSTSE REEQA A CLRLLTAR+RTRAEL+G+L +RGY E + RV
Sbjct 2 TSFPHPSTSESGPDPDSEPNREEQAHAYCLRLLTARARTRAELSGKLTQRGYDEPVVARV 61
Query 53 LDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAE 112
LDRL VGLVDD DFAEQWV+SR A K KRALAAEL KGVDD+VI++ L IDAGAE
Sbjct 62 LDRLVEVGLVDDEDFAEQWVRSRHLYAGKGKRALAAELRRKGVDDEVISSSLADIDAGAE 121
Query 113 RGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERR 172
R RAE+LVR RLRRE L D+ + +V RR+ MLARRGY Q++A +VV ELA ERERR
Sbjct 122 RDRAERLVRDRLRREKLDDEPGSDLKVKRRMAGMLARRGYSQSMALDVVTVELAGERERR 181
Query 173 RV 174
RV
Sbjct 182 RV 183
>gi|145224555|ref|YP_001135233.1| recombination regulator RecX [Mycobacterium gilvum PYR-GCK]
gi|145217041|gb|ABP46445.1| regulatory protein RecX [Mycobacterium gilvum PYR-GCK]
Length=191
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/188 (64%), Positives = 135/188 (72%), Gaps = 15/188 (7%)
Query 1 MTVSCPPPSTSE------------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDI 48
MT+ P PSTS+ R EQARALCLRLLT R+RTRAEL QL KRGYP+D+
Sbjct 5 MTL-FPLPSTSDSDGTPGTDEFATRAEQARALCLRLLTVRARTRAELEAQLTKRGYPDDV 63
Query 49 GNRVLDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGID 108
VLDRLA VGLVDD DFAEQWV+SRR NA K KRALA+EL KGVD +VI L ID
Sbjct 64 SAEVLDRLAQVGLVDDEDFAEQWVRSRRINAGKGKRALASELRNKGVDSEVIDAALADID 123
Query 109 AGAERGRAEKLVRARLRREVLIDDGTDEA--RVSRRLVAMLARRGYGQTLACEVVIAELA 166
AGAER RAE+LVR +LRRE L D G +A +V RRLV MLARRGY Q++A +VV ELA
Sbjct 124 AGAERTRAEQLVRDKLRREKLGDPGDRDAENKVMRRLVGMLARRGYHQSMALDVVTTELA 183
Query 167 AERERRRV 174
ERERR V
Sbjct 184 NERERRTV 191
>gi|315444886|ref|YP_004077765.1| hypothetical protein Mspyr1_33190 [Mycobacterium sp. Spyr1]
gi|315263189|gb|ADT99930.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=187
Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/188 (64%), Positives = 135/188 (72%), Gaps = 15/188 (7%)
Query 1 MTVSCPPPSTSE------------REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDI 48
MT+ P PSTS+ R EQARALCLRLLT R+RTRAEL QL KRGYP+D+
Sbjct 1 MTL-FPLPSTSDSDGTPGTDEFATRAEQARALCLRLLTVRARTRAELEAQLTKRGYPDDV 59
Query 49 GNRVLDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGID 108
VLDRLA VGLVDD DFAEQWV+SRR NA K KRALA+EL KGVD +VI L ID
Sbjct 60 SAEVLDRLAQVGLVDDEDFAEQWVRSRRINAGKGKRALASELRNKGVDSEVIDAALADID 119
Query 109 AGAERGRAEKLVRARLRREVLIDDGTDEA--RVSRRLVAMLARRGYGQTLACEVVIAELA 166
AGAER RAE+LVR +LRRE L D G +A +V RRLV MLARRGY Q++A +VV ELA
Sbjct 120 AGAERTRAEQLVRDKLRREKLGDPGDRDAENKVMRRLVGMLARRGYHQSMALDVVTTELA 179
Query 167 AERERRRV 174
ERERR V
Sbjct 180 NERERRTV 187
>gi|240171188|ref|ZP_04749847.1| recombination regulator RecX [Mycobacterium kansasii ATCC 12478]
Length=123
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/123 (87%), Positives = 112/123 (92%), Gaps = 0/123 (0%)
Query 52 VLDRLAAVGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGA 111
+LDRLAAVGLVDDTDFAEQWVQ RRAN KSKRALAAELH KGVD+DVITTVL GIDAGA
Sbjct 1 MLDRLAAVGLVDDTDFAEQWVQYRRANTGKSKRALAAELHTKGVDNDVITTVLAGIDAGA 60
Query 112 ERGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERER 171
ER RAE+LVRARLRRE L +D DEARVSRRLVAMLARRGY QT+ACEVVIAELAAERER
Sbjct 61 ERARAEQLVRARLRRETLGEDNRDEARVSRRLVAMLARRGYSQTVACEVVIAELAAERER 120
Query 172 RRV 174
RRV
Sbjct 121 RRV 123
>gi|118473993|ref|YP_887058.1| recombination regulator RecX [Mycobacterium smegmatis str. MC2
155]
gi|18273057|sp|P94965.2|RECX_MYCS2 RecName: Full=Regulatory protein recX
gi|12580853|emb|CAA67596.2| RecX protein [Mycobacterium smegmatis str. MC2 155]
gi|118175280|gb|ABK76176.1| regulatory protein RecX [Mycobacterium smegmatis str. MC2 155]
Length=188
Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/164 (67%), Positives = 127/164 (78%), Gaps = 4/164 (2%)
Query 13 REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWV 72
REEQA+ +CLRLLT R+RTRAEL QL KRGYP+D+ RVLDRL VGL+DD DFAEQWV
Sbjct 27 REEQAKNVCLRLLTVRARTRAELETQLTKRGYPDDVSARVLDRLTEVGLIDDEDFAEQWV 86
Query 73 QSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDD 132
+SR NA K KRALA EL KGVDD+VI++ L +D AER RAE+LVR +LRRE L D
Sbjct 87 RSRHLNAGKGKRALAVELRKKGVDDEVISSALADLDPAAERQRAEQLVRDKLRRERL--D 144
Query 133 GTDE--ARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
GT E +V+RRLV MLARRGY Q++A +VV ELA ERERRRV
Sbjct 145 GTPENDVKVTRRLVGMLARRGYNQSMAYDVVSVELANERERRRV 188
>gi|169630142|ref|YP_001703791.1| recombination regulator RecX [Mycobacterium abscessus ATCC 19977]
gi|254790823|sp|B1MD16.1|RECX_MYCA9 RecName: Full=Regulatory protein recX
gi|169242109|emb|CAM63137.1| Probable regulatory protein RecX [Mycobacterium abscessus]
Length=204
Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/175 (56%), Positives = 120/175 (69%), Gaps = 7/175 (4%)
Query 4 SCPPPSTSE----REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAV 59
S P T E R+EQA + CLRLLT+R+RTRAEL +LA+RGYP+D+ R++DRLA
Sbjct 32 SVPEAPTREPVDSRDEQAWSYCLRLLTSRARTRAELTERLARRGYPDDVSERIMDRLATA 91
Query 60 GLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKL 119
GLV+D DFA QWVQSR + K KRALAAEL KGV + L ID AER RA +L
Sbjct 92 GLVNDADFATQWVQSRHTYSGKGKRALAAELRTKGVSAENAAAALAQIDGEAERSRAAEL 151
Query 120 VRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERERRRV 174
V +LR E L D G + +RRLVAMLARRGYGQ++A +VV LA+E++RR V
Sbjct 152 VTKKLRSENLDDGGI---KAARRLVAMLARRGYGQSMAYDVVKNALASEKDRRDV 203
>gi|226366161|ref|YP_002783944.1| recombination regulator RecX [Rhodococcus opacus B4]
gi|226244651|dbj|BAH54999.1| regulatory protein RecX [Rhodococcus opacus B4]
Length=171
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/159 (55%), Positives = 104/159 (66%), Gaps = 4/159 (2%)
Query 7 PPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTD 66
P E QA+ LCLRLLT R+R+RAELA +LAK+GY DI RVLDRL VGLV+D D
Sbjct 3 PTGEGGTETQAKDLCLRLLTDRARSRAELADRLAKKGYSADIAERVLDRLTEVGLVNDAD 62
Query 67 FAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRR 126
FA+QWV SR ++ K KRALA EL KG+ + T L ID+ ER RA +LV +L R
Sbjct 63 FAQQWVHSRHTHSGKGKRALAMELRRKGIGQEDATEALAQIDSDDERARATELVAKKL-R 121
Query 127 EVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAEL 165
V D D R RRLV+MLARRG+ Q +A EVV +L
Sbjct 122 TVSAD---DRDRAVRRLVSMLARRGFPQGMAFEVVKEQL 157
>gi|226306241|ref|YP_002766201.1| regulatory protein RecX [Rhodococcus erythropolis PR4]
gi|226185358|dbj|BAH33462.1| regulatory protein RecX [Rhodococcus erythropolis PR4]
Length=192
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/154 (51%), Positives = 104/154 (68%), Gaps = 4/154 (2%)
Query 14 EEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQ 73
E QA+ CLRLLT R+R+R+EL +L+ RG+ +I +VLDRL +GL+DD DFA QWV
Sbjct 39 EAQAKDACLRLLTDRARSRSELETKLSGRGFEPEIITKVLDRLQEIGLIDDADFANQWVH 98
Query 74 SRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDG 133
SR + K KRALA EL KG+D DV + L ID ER RA +LVR +L+ + +
Sbjct 99 SRHTYSGKGKRALAVELRLKGIDQDVASEALSQIDPEDERERAAELVRRKLKNKPV---- 154
Query 134 TDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
D +V+RRLV+MLAR+GY ++ EVV AE+AA
Sbjct 155 DDRDKVTRRLVSMLARKGYSAGMSYEVVKAEMAA 188
>gi|111023724|ref|YP_706696.1| recombination regulator RecX [Rhodococcus jostii RHA1]
gi|110823254|gb|ABG98538.1| regulatory protein RecX [Rhodococcus jostii RHA1]
Length=171
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/159 (53%), Positives = 103/159 (65%), Gaps = 4/159 (2%)
Query 7 PPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTD 66
P E QA+ LCLRLLT R+R+RAEL+ +LAK+GY +I RVLDRL VGLV+D D
Sbjct 3 PTGEGGTETQAKDLCLRLLTDRARSRAELSERLAKKGYSAEIAERVLDRLTEVGLVNDAD 62
Query 67 FAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRR 126
FA+QWV SR + K KRALA EL KG+ + T L ID+ ER RA +LV +L R
Sbjct 63 FAQQWVHSRHTYSGKGKRALALELRRKGIGQEEATEALAQIDSEDERARATELVAKKL-R 121
Query 127 EVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAEL 165
V D D R RRLV+MLARRG+ Q +A EVV +L
Sbjct 122 TVSTD---DRDRAVRRLVSMLARRGFPQGMAFEVVKEQL 157
>gi|229490855|ref|ZP_04384690.1| regulatory protein RecX [Rhodococcus erythropolis SK121]
gi|229322245|gb|EEN88031.1| regulatory protein RecX [Rhodococcus erythropolis SK121]
Length=192
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 103/154 (67%), Gaps = 4/154 (2%)
Query 14 EEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQ 73
E QA+ CLRLLT R+R+R+EL +L+ RG+ +I +VLDRL +GL+DD DFA QWV
Sbjct 39 EAQAKDACLRLLTDRARSRSELETKLSGRGFEPEIIAKVLDRLQEIGLIDDADFANQWVH 98
Query 74 SRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDG 133
SR + K KRALA EL KG+D D + L ID ER RA +LVR +L+ + +
Sbjct 99 SRHTYSGKGKRALAVELRLKGIDQDTASEALSQIDPEDERERAAELVRRKLKNKPV---- 154
Query 134 TDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
D +V+RRLV+MLAR+GY ++ EVV AE+AA
Sbjct 155 DDRDKVTRRLVSMLARKGYSAGMSYEVVKAEMAA 188
>gi|289751390|ref|ZP_06510768.1| regulatory protein recX [Mycobacterium tuberculosis T92]
gi|289691977|gb|EFD59406.1| regulatory protein recX [Mycobacterium tuberculosis T92]
Length=76
Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/76 (99%), Positives = 76/76 (100%), Gaps = 0/76 (0%)
Query 99 VITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLAC 158
+ITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLAC
Sbjct 1 MITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLAC 60
Query 159 EVVIAELAAERERRRV 174
EVVIAELAAERERRRV
Sbjct 61 EVVIAELAAERERRRV 76
>gi|312139382|ref|YP_004006718.1| recx regulatory protein [Rhodococcus equi 103S]
gi|311888721|emb|CBH48033.1| putative RecX regulatory protein [Rhodococcus equi 103S]
Length=229
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/153 (53%), Positives = 99/153 (65%), Gaps = 2/153 (1%)
Query 16 QARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQSR 75
+A+ +CLRLLT R+R+RAEL +LA++GYP+ + + VLDRL V LVDD FAEQWV SR
Sbjct 65 RAKDVCLRLLTDRARSRAELEQKLAQKGYPQAVIDTVLDRLTEVKLVDDAAFAEQWVHSR 124
Query 76 RANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLID--DG 133
+ K +RALA EL KG+DD L I A ER RA +LVR +L R D D
Sbjct 125 HTYSGKGRRALATELRRKGIDDSTSNEALSQISADDERERAAELVRKKLLRTTSADISDR 184
Query 134 TDEARVSRRLVAMLARRGYGQTLACEVVIAELA 166
D R+ RRLV MLARRGY L+ VV AELA
Sbjct 185 DDRERLMRRLVGMLARRGYPAGLSFTVVKAELA 217
>gi|325672737|ref|ZP_08152433.1| recombination regulator RecX [Rhodococcus equi ATCC 33707]
gi|325556614|gb|EGD26280.1| recombination regulator RecX [Rhodococcus equi ATCC 33707]
Length=229
Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/153 (53%), Positives = 99/153 (65%), Gaps = 2/153 (1%)
Query 16 QARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQSR 75
+A+ +CLRLLT R+R+RAEL +LA++GYP+ + + VLDRL V LVDD FAEQWV SR
Sbjct 65 RAKDVCLRLLTDRARSRAELEQKLAQKGYPQAVIDTVLDRLTEVKLVDDAAFAEQWVHSR 124
Query 76 RANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLID--DG 133
+ K +RALA EL KG+DD L I A ER RA +LVR +L R D D
Sbjct 125 HTYSGKGRRALATELRRKGIDDSTSNEALSQISADDERERAAELVRKKLLRTTSADIADR 184
Query 134 TDEARVSRRLVAMLARRGYGQTLACEVVIAELA 166
D R+ RRLV MLARRGY L+ VV AELA
Sbjct 185 DDRERLMRRLVGMLARRGYPAGLSFAVVKAELA 217
>gi|324997717|ref|ZP_08118829.1| recombination regulator RecX [Pseudonocardia sp. P1]
Length=396
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/166 (46%), Positives = 106/166 (64%), Gaps = 3/166 (1%)
Query 4 SCPPP--STSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGL 61
S PPP + +E+E +A+ +CLRLLT R+RT EL L+++ P+D+ RVL+R VGL
Sbjct 218 STPPPDETPAEQETRAKDICLRLLTDRARTVKELGDALSRKEIPDDVARRVLERFDEVGL 277
Query 62 VDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVR 121
+DD FA+QWV+SR + KRA+A ELH KGVD + L ID +ER RA +LV
Sbjct 278 IDDKAFADQWVRSRHRHRGLGKRAIALELHRKGVDRETADEALTEIDEDSERERARELVT 337
Query 122 ARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
RLR + + ++ +R+LV MLAR+GYG +A VV E+AA
Sbjct 338 RRLRG-LPVGSREEQQSTARKLVGMLARKGYGPGVAYGVVKEEIAA 382
>gi|345009759|ref|YP_004812113.1| Regulatory protein recX [Streptomyces violaceusniger Tu 4113]
gi|344036108|gb|AEM81833.1| Regulatory protein recX [Streptomyces violaceusniger Tu 4113]
Length=203
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/156 (49%), Positives = 92/156 (59%), Gaps = 7/156 (4%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
PPP EEQARA+CLRLLT RTR +LA L RG P+D VL R VGL+DD
Sbjct 34 PPPGP---EEQARAICLRLLTGTPRTRKQLADALRTRGIPDDAAEEVLSRFEGVGLIDDA 90
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FAE WV+SR + ++RALA EL KGVD +I +G +DA E A++LV +LR
Sbjct 91 AFAEAWVESRHHSRGLARRALARELRTKGVDSALIDDAVGQLDADQEERTAQELVERKLR 150
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVV 161
G D + RRL MLAR+GY + LA VV
Sbjct 151 ----ATRGLDREKRIRRLAGMLARKGYSEGLALRVV 182
>gi|119716569|ref|YP_923534.1| regulatory protein RecX [Nocardioides sp. JS614]
gi|119537230|gb|ABL81847.1| regulatory protein RecX [Nocardioides sp. JS614]
Length=202
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/169 (44%), Positives = 99/169 (59%), Gaps = 9/169 (5%)
Query 4 SCPPPSTSE-----REEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAA 58
S PP ++ E AR + L LT ++R+R EL+ +LA R P+++ +R+LDR
Sbjct 29 SAPPDPVADGPDADPEAVARKILLDQLTGQARSRKELSDKLASRNVPDEVASRLLDRFEE 88
Query 59 VGLVDDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEK 118
VGLVDD FA WVQSR+ N ++RALA EL KGV D+V L +D E A
Sbjct 89 VGLVDDRAFARAWVQSRQPNKGLARRALAQELRRKGVADEVAREALDEVDPADEEAAARA 148
Query 119 LVRARLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
LVR +LR +D+ T +RRLV +LAR+GYG LA VV ELA+
Sbjct 149 LVRKKLRSLARVDETT----ATRRLVGLLARKGYGSGLAFAVVRDELAS 193
>gi|331698362|ref|YP_004334601.1| Regulatory protein recX [Pseudonocardia dioxanivorans CB1190]
gi|326953051|gb|AEA26748.1| Regulatory protein recX [Pseudonocardia dioxanivorans CB1190]
Length=440
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/166 (44%), Positives = 98/166 (60%), Gaps = 7/166 (4%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
PP ++ AR +CLRLL +RSRTR ELA L ++G P+D + VL+R VGL+DD
Sbjct 268 PPEPPADPVAAARTICLRLLESRSRTRQELAQALRRKGIPDDAADVVLERFGEVGLIDDK 327
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FA+QWV+SR + +RA+A EL KGVD + L +D +E RA LV +LR
Sbjct 328 AFADQWVRSRHTYSGLGRRAIAVELRRKGVDSETAGEALAEVDDASEEARARALVDRKLR 387
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVV---IAELAAE 168
+ D + +RRL+ MLAR+GY +A VV +AE AAE
Sbjct 388 TRPGVPDES----TARRLLGMLARKGYPAGIAYRVVREAVAEHAAE 429
>gi|257056757|ref|YP_003134589.1| hypothetical protein Svir_27810 [Saccharomonospora viridis DSM
43017]
gi|256586629|gb|ACU97762.1| uncharacterized conserved protein [Saccharomonospora viridis
DSM 43017]
Length=179
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/161 (43%), Positives = 97/161 (61%), Gaps = 6/161 (3%)
Query 7 PPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTD 66
PP + R +A+ +C LL AR RT+ EL L +RG+ +D+ R+L +L GLVDD
Sbjct 12 PPEEAWR--KAKEVCFDLLAARPRTKEELRQALRRRGFADDVSERLLGKLDEAGLVDDVA 69
Query 67 FAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRR 126
FAE WV+SR + ++RAL EL KGVD ++ ID E RA +LVR +LR
Sbjct 70 FAEMWVRSRHTHRGLARRALVMELKRKGVDPEIAVEAADAIDPEDEEERARQLVRKKLR- 128
Query 127 EVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
++D DE + +RRL+ +LAR+GY Q L+ +VV EL A
Sbjct 129 -TMVD--VDEQKATRRLLGLLARKGYPQGLSYQVVREELRA 166
>gi|302542079|ref|ZP_07294421.1| RecX protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459697|gb|EFL22790.1| RecX protein [Streptomyces himastatinicus ATCC 53653]
Length=203
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/148 (48%), Positives = 88/148 (60%), Gaps = 4/148 (2%)
Query 14 EEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQ 73
EEQARA+CLRLLT RTR +LA L RG P++ VL R VGL+DD FAE WV+
Sbjct 39 EEQARAICLRLLTGTPRTRQQLADALRTRGIPDEAAEEVLSRFEDVGLIDDAAFAEAWVE 98
Query 74 SRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDG 133
SR + ++RALA EL KGVD +I +G +DA E A +LV +LR G
Sbjct 99 SRHHSRGLARRALARELRTKGVDSALIADAMGQLDADQEERTARELVERKLR----TTRG 154
Query 134 TDEARVSRRLVAMLARRGYGQTLACEVV 161
D + RRL MLAR+GY + +A VV
Sbjct 155 LDREKRLRRLAGMLARKGYPEGVALRVV 182
>gi|54025811|ref|YP_120053.1| recombination regulator RecX [Nocardia farcinica IFM 10152]
gi|54017319|dbj|BAD58689.1| putative RecX protein [Nocardia farcinica IFM 10152]
Length=195
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/165 (48%), Positives = 100/165 (61%), Gaps = 9/165 (5%)
Query 9 STSERE------EQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLV 62
STSER EQA+ CLRLL R+R+RAELA +LA +GY ++ + L RLA VGL+
Sbjct 19 STSERTPHGGTVEQAKEACLRLLAVRARSRAELAQRLAAKGYSAEVADAALARLAEVGLI 78
Query 63 DDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRA 122
DD FAEQWV SR + K ++ALA EL KGV + L + E+ RA +LVR
Sbjct 79 DDAAFAEQWVASRHTYSGKGRQALAQELRRKGVAAADVDAALAAVSDDDEQARAAELVRR 138
Query 123 RLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAA 167
+LR + + +V RRLV MLARRGY Q+ A VV AEL A
Sbjct 139 KLR---TMPRNLERNKVLRRLVGMLARRGYPQSTAFAVVKAELGA 180
>gi|297156747|gb|ADI06459.1| recombination regulator RecX [Streptomyces bingchenggensis BCW-1]
Length=200
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/155 (46%), Positives = 92/155 (60%), Gaps = 6/155 (3%)
Query 7 PPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTD 66
PP + E EQARA+CLRLLT RTR +LA L RG P+++ VL R VGL+DD
Sbjct 31 PPRSPE--EQARAICLRLLTGTPRTRRQLADALRTRGIPDEVAQEVLSRFEDVGLIDDAA 88
Query 67 FAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRR 126
FA+ WV+SR + ++RALA EL KGVD +I +G +DA E A +LV +LR
Sbjct 89 FADAWVESRHHSRGLARRALARELRTKGVDSALIDEAVGQLDAEQEERTARELVERKLRA 148
Query 127 EVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVV 161
G D + RRL MLAR+GY + +A VV
Sbjct 149 TC----GLDREKRLRRLAGMLARKGYPEGVALRVV 179
>gi|72161208|ref|YP_288865.1| recombination regulator RecX [Thermobifida fusca YX]
gi|123733590|sp|Q47RS5.1|RECX_THEFY RecName: Full=Regulatory protein recX
gi|71914940|gb|AAZ54842.1| putative RecX protein [Thermobifida fusca YX]
Length=185
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/166 (47%), Positives = 95/166 (58%), Gaps = 8/166 (4%)
Query 7 PPSTSEREE----QARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLV 62
PP S E +ARA+CLRLLT RTRA+L L +R P+++ VLDR VG+V
Sbjct 12 PPGGSAAPEDLYARARAICLRLLTRAPRTRAQLTDALRRREIPDEVIEAVLDRFGEVGIV 71
Query 63 DDTDFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRA 122
DD FAE WV SR A ++RALAAEL +GVD+D + + G+ E A +LVR
Sbjct 72 DDAVFAEAWVDSRHAGRGLARRALAAELRQRGVDEDTVRAAVDGLSPAQEEATARQLVRR 131
Query 123 RLRREVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAE 168
RL E RV RRL+ MLARRGY LA +V EL AE
Sbjct 132 RL---AATRGKPTEVRV-RRLMGMLARRGYSAGLAYRLVREELEAE 173
>gi|161511222|ref|NP_823667.2| recombination regulator RecX [Streptomyces avermitilis MA-4680]
Length=265
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/165 (45%), Positives = 95/165 (58%), Gaps = 7/165 (4%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
PP +ER ARA+CLRLLT RTR +LA L KR PED+ + VL R VGL++D+
Sbjct 98 PPGDPAER---ARAICLRLLTGTPRTRKQLADALRKREIPEDVADEVLSRFEEVGLINDS 154
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FA+ WV+SR ++RALA EL KGVD +I +G +D+ E A +LV +LR
Sbjct 155 AFADAWVESRHHGRGLARRALARELRTKGVDSTLIDEAVGQLDSEQEEATARELVARKLR 214
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
G D + RRL MLAR+GY + +A VV L E E
Sbjct 215 STR----GLDRDKRLRRLAGMLARKGYSEGMALRVVRQALEEEGE 255
>gi|302537317|ref|ZP_07289659.1| regulatory protein recX [Streptomyces sp. C]
gi|302446212|gb|EFL18028.1| regulatory protein recX [Streptomyces sp. C]
Length=189
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/164 (45%), Positives = 93/164 (57%), Gaps = 6/164 (3%)
Query 7 PPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTD 66
PP + E EQARA+CLRLLT RTR +L LAKRG PE++ VL R VGL+DD
Sbjct 22 PPQSPE--EQARAICLRLLTGMPRTRRQLEEALAKRGIPEEVSQEVLSRYEEVGLIDDAA 79
Query 67 FAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRR 126
FA WV+SR ++RALA EL KGV ++ L +D+ E A +LV +LR
Sbjct 80 FAGAWVESRHRGRGLARRALAQELRTKGVHTTLVQEALEQLDSEQEEQTARELVERKLRS 139
Query 127 EVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
G + + RRL MLAR+GY + +A VV L AE E
Sbjct 140 ----TRGLERDKRIRRLAGMLARKGYPEGMALRVVRRALEAEGE 179
>gi|329939951|ref|ZP_08289233.1| recombination regulator RecX [Streptomyces griseoaurantiacus
M045]
gi|329300777|gb|EGG44673.1| recombination regulator RecX [Streptomyces griseoaurantiacus
M045]
Length=270
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/147 (48%), Positives = 89/147 (61%), Gaps = 4/147 (2%)
Query 15 EQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQS 74
E+ARA+CLRLLT RTR +LA L KR P+D+ VLDR A VGL+DD FA+ WV+S
Sbjct 109 ERARAICLRLLTGTPRTRKQLADALRKREIPDDVAQGVLDRFAEVGLIDDGAFADAWVES 168
Query 75 RRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGT 134
R ++RALA EL KGVD +I +G +DA E A +LV +LR G
Sbjct 169 RHHGRGLARRALARELRTKGVDPTLIDEAVGQLDAEQEEETARELVARKLR----ATRGL 224
Query 135 DEARVSRRLVAMLARRGYGQTLACEVV 161
D + RRL MLAR+GY + +A VV
Sbjct 225 DREKRLRRLAGMLARKGYPEGMALRVV 251
>gi|29606139|dbj|BAC70202.1| putative regulatory protein RecX [Streptomyces avermitilis MA-4680]
Length=315
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/165 (45%), Positives = 95/165 (58%), Gaps = 7/165 (4%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
PP +ER ARA+CLRLLT RTR +LA L KR PED+ + VL R VGL++D+
Sbjct 148 PPGDPAER---ARAICLRLLTGTPRTRKQLADALRKREIPEDVADEVLSRFEEVGLINDS 204
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FA+ WV+SR ++RALA EL KGVD +I +G +D+ E A +LV +LR
Sbjct 205 AFADAWVESRHHGRGLARRALARELRTKGVDSTLIDEAVGQLDSEQEEATARELVARKLR 264
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
G D + RRL MLAR+GY + +A VV L E E
Sbjct 265 STR----GLDRDKRLRRLAGMLARKGYSEGMALRVVRQALEEEGE 305
>gi|294631805|ref|ZP_06710365.1| regulatory protein RecX [Streptomyces sp. e14]
gi|292835138|gb|EFF93487.1| regulatory protein RecX [Streptomyces sp. e14]
Length=218
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/156 (47%), Positives = 91/156 (59%), Gaps = 4/156 (2%)
Query 15 EQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQS 74
E+ARA+CLRLLT RTR +LA L KR P++ VL R VGL+DD+ FA+ WV+S
Sbjct 57 ERARAICLRLLTGTPRTRKQLADALRKREIPDEAAQEVLSRFEEVGLIDDSAFADAWVES 116
Query 75 RRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGT 134
R ++RALA EL KGVD +I +G +DA E A +LV +LR G
Sbjct 117 RHHGRGLARRALARELRTKGVDATLIDEAVGRLDADQEEATARELVARKLRSTR----GL 172
Query 135 DEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
D + RRL MLAR+GY Q LA +VV L E E
Sbjct 173 DRDKRLRRLAGMLARKGYSQGLALKVVRQALEEEGE 208
>gi|291301647|ref|YP_003512925.1| regulatory protein RecX [Stackebrandtia nassauensis DSM 44728]
gi|290570867|gb|ADD43832.1| regulatory protein RecX [Stackebrandtia nassauensis DSM 44728]
Length=192
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/165 (45%), Positives = 93/165 (57%), Gaps = 7/165 (4%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
PP +ER AR +CLRLL R RT ELA L K+ P+DI VLDR VG+VDD
Sbjct 12 PPKDPAER---AREICLRLLDVRPRTYIELAEALTKKDIPDDIIAEVLDRYREVGMVDDA 68
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FA WV SR + S+RAL++EL KGVD +++ L +D +ER A LV RLR
Sbjct 69 AFARAWVSSRHRSKKLSRRALSSELRRKGVDTELVDEALEQVDGDSEREAARALVEKRLR 128
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
+ V RRLV+MLAR+GY +A VV LA + E
Sbjct 129 SMGSVPPDA----VFRRLVSMLARKGYPAGVAVGVVKDILAEQAE 169
>gi|345002450|ref|YP_004805304.1| regulatory protein RecX [Streptomyces sp. SirexAA-E]
gi|344318076|gb|AEN12764.1| regulatory protein RecX [Streptomyces sp. SirexAA-E]
Length=227
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/156 (45%), Positives = 90/156 (58%), Gaps = 4/156 (2%)
Query 15 EQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQS 74
EQAR +CLRLLT RTR +LA L KR P++ VL R VGL+DD FA WV+S
Sbjct 67 EQARNICLRLLTGTPRTRKQLADALRKREIPDEAAEEVLSRFEDVGLIDDAAFAGAWVES 126
Query 75 RRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGT 134
R ++RAL ELH KGVD +I +G +D+ E E+ RA + R++ G
Sbjct 127 RHRGRGLARRALVRELHTKGVDSALIDEAVGQLDSEQE----EETARALVDRKLRSTRGL 182
Query 135 DEARVSRRLVAMLARRGYGQTLACEVVIAELAAERE 170
D + RRL MLAR+GYG+ +A VV L AE E
Sbjct 183 DRDKRLRRLAGMLARKGYGEGMALRVVRQALEAEGE 218
>gi|284992304|ref|YP_003410858.1| regulatory protein RecX [Geodermatophilus obscurus DSM 43160]
gi|284065549|gb|ADB76487.1| regulatory protein RecX [Geodermatophilus obscurus DSM 43160]
Length=222
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/164 (46%), Positives = 95/164 (58%), Gaps = 4/164 (2%)
Query 6 PPPSTSEREEQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDT 65
P + E+ AR++CLR LT +TR +LA LAKRG +D+ VLDR + VGL+DD
Sbjct 41 PEDEPGDPEQVARSICLRALTGTPKTRQQLADLLAKRGISDDVAELVLDRFSEVGLIDDA 100
Query 66 DFAEQWVQSRRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLR 125
FA WV SR+A ++RAL AEL AKGVD +V + +D E A +LV+ RL
Sbjct 101 AFARAWVTSRQAGRGLARRALKAELRAKGVDGEVAEEAVALVDDQDEWDAARRLVQRRLP 160
Query 126 REVLIDDGTDEARVSRRLVAMLARRGYGQTLACEVVIAELAAER 169
+D T E RRLV MLAR+GYG LA VV L ER
Sbjct 161 GLRRVDRVTAE----RRLVGMLARKGYGSGLAGWVVREALDEER 200
>gi|302522275|ref|ZP_07274617.1| regulatory protein recX [Streptomyces sp. SPB78]
gi|302431170|gb|EFL02986.1| regulatory protein recX [Streptomyces sp. SPB78]
Length=207
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/147 (47%), Positives = 88/147 (60%), Gaps = 4/147 (2%)
Query 15 EQARALCLRLLTARSRTRAELAGQLAKRGYPEDIGNRVLDRLAAVGLVDDTDFAEQWVQS 74
EQARA+CLRLLT +RTR +LA L KR PE+ VL R VGL+DD FA WV+S
Sbjct 47 EQARAICLRLLTGTARTRKQLAEALRKREIPEEAAEEVLSRFEEVGLIDDAAFAGAWVES 106
Query 75 RRANAAKSKRALAAELHAKGVDDDVITTVLGGIDAGAERGRAEKLVRARLRREVLIDDGT 134
R + ++RALA EL KGV+ +I +G +D+ E A +LV +LR G
Sbjct 107 RHHSRGLARRALARELRTKGVESSLIDEAVGQLDSEREEATARELVDRKLR----ATRGL 162
Query 135 DEARVSRRLVAMLARRGYGQTLACEVV 161
D + RRL MLAR+GY ++LA VV
Sbjct 163 DRDKRLRRLAGMLARKGYPESLALRVV 189
Lambda K H
0.319 0.133 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 142560794112
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40