BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2737c Length=790 Score E Sequences producing significant alignments: (Bits) Value gi|15609874|ref|NP_217253.1| DNA recombination protein RecA [Myc... 1602 0.0 gi|289444279|ref|ZP_06434023.1| recombination protein recA [Myco... 1600 0.0 gi|289448392|ref|ZP_06438136.1| recombination protein recA [Myco... 1599 0.0 gi|289754840|ref|ZP_06514218.1| recombinase A [Mycobacterium tub... 1599 0.0 gi|339632749|ref|YP_004724391.1| RECA protein (recombinase A) [c... 1598 0.0 gi|254232836|ref|ZP_04926163.1| recA protein (recombinase A) [My... 1598 0.0 gi|289575434|ref|ZP_06455661.1| recombination protein recA [Myco... 1597 0.0 gi|340627737|ref|YP_004746189.1| recombinase A [Mycobacterium ca... 1591 0.0 gi|289751391|ref|ZP_06510769.1| recombination protein recA [Myco... 1501 0.0 gi|289758864|ref|ZP_06518242.1| recombinase A [Mycobacterium tub... 1482 0.0 gi|308377116|ref|ZP_07668435.1| putative protein RecA [Mycobacte... 1411 0.0 gi|254551792|ref|ZP_05142239.1| DNA recombination protein RecA [... 1236 0.0 gi|289570913|ref|ZP_06451140.1| recombination protein recA [Myco... 918 0.0 gi|12084113|pdb|1G18|A Chain A, Reca-Adp-Alf4 Complex >gi|120841... 504 3e-140 gi|47571272|gb|AAT35793.1| RecA [Mycobacterium gordonae] 488 2e-135 gi|47571274|gb|AAT35794.1| RecA [Mycobacterium marinum] >gi|4757... 487 3e-135 gi|183981991|ref|YP_001850282.1| recombinase A RecA [Mycobacteri... 487 4e-135 gi|240171187|ref|ZP_04749846.1| recombinase A [Mycobacterium kan... 487 4e-135 gi|47571282|gb|AAT35798.1| RecA [Mycobacterium szulgai] 486 5e-135 gi|47571288|gb|AAT35801.1| RecA [Mycobacterium gastri] >gi|47571... 486 5e-135 gi|47571270|gb|AAT35792.1| RecA [Mycobacterium gordonae] 486 6e-135 gi|41408946|ref|NP_961782.1| recombinase A [Mycobacterium avium ... 486 7e-135 gi|47571280|gb|AAT35797.1| RecA [Mycobacterium szulgai] 486 7e-135 gi|296171749|ref|ZP_06852908.1| recombination protein A [Mycobac... 486 8e-135 gi|118464179|ref|YP_882804.1| recombinase A [Mycobacterium avium... 486 1e-134 gi|118618697|ref|YP_907029.1| recombinase A [Mycobacterium ulcer... 484 2e-134 gi|342858398|ref|ZP_08715053.1| recombinase A [Mycobacterium col... 484 3e-134 gi|47571254|gb|AAT35784.1| RecA [Mycobacterium intracellulare AT... 484 3e-134 gi|254821760|ref|ZP_05226761.1| recombinase A [Mycobacterium int... 484 4e-134 gi|47571268|gb|AAT35791.1| RecA [Mycobacterium simiae] 482 1e-133 gi|47571262|gb|AAT35788.1| RecA [Mycobacterium sp. ATCC 35788] 481 2e-133 gi|47571278|gb|AAT35796.1| RecA [Mycobacterium xenopi] 481 2e-133 gi|47571260|gb|AAT35787.1| RecA [Mycobacterium scrofulaceum] 481 3e-133 gi|47571256|gb|AAT35785.1| RecA [Mycobacterium avium subsp. aviu... 480 4e-133 gi|47571292|gb|AAT35803.1| RecA [Mycobacterium shimoidei] 479 1e-132 gi|47571264|gb|AAT35789.1| RecA [Mycobacterium asiaticum] 478 1e-132 gi|47571266|gb|AAT35790.1| RecA [Mycobacterium asiaticum] 478 2e-132 gi|31540539|gb|AAP49232.1| RecA [Mycobacterium album] 473 5e-131 gi|42416865|gb|AAS16314.1| RecA [Mycobacterium houstonense] >gi|... 473 6e-131 gi|42416885|gb|AAS16324.1| RecA [Mycobacterium chelonae] 473 7e-131 gi|42416899|gb|AAS16331.1| RecA [Mycobacterium wolinskyi] 473 7e-131 gi|93278392|gb|ABF06626.1| RecA [Mycobacterium gadium] 473 8e-131 gi|31540537|gb|AAP49231.1| RecA [Mycobacterium album] 473 8e-131 gi|31540549|gb|AAP49237.1| RecA [Mycobacterium gadium] 473 8e-131 gi|31540543|gb|AAP49234.1| RecA [Mycobacterium chelonae] >gi|315... 472 1e-130 gi|42416875|gb|AAS16319.1| RecA [Mycobacterium chelonae] 472 1e-130 gi|31540535|gb|AAP49230.1| RecA [Mycobacterium abscessus ATCC 19... 472 1e-130 gi|336441122|gb|AEI54786.1| recombinase A [Mycobacterium frankli... 471 2e-130 gi|47571296|gb|AAT35805.1| RecA [Mycobacterium triviale] 471 2e-130 gi|169630143|ref|YP_001703792.1| RecA protein [Mycobacterium abs... 471 2e-130 >gi|15609874|ref|NP_217253.1| DNA recombination protein RecA [Mycobacterium tuberculosis H37Rv] gi|15842276|ref|NP_337313.1| DNA recombination protein RecA [Mycobacterium tuberculosis CDC1551] gi|31793909|ref|NP_856402.1| DNA recombination protein RecA [Mycobacterium bovis AF2122/97] 59 more sequence titles Length=790 Score = 1602 bits (4147), Expect = 0.0, Method: Compositional matrix adjust. Identities = 790/790 (100%), Positives = 790/790 (100%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|289444279|ref|ZP_06434023.1| recombination protein recA [Mycobacterium tuberculosis T46] gi|289417198|gb|EFD14438.1| recombination protein recA [Mycobacterium tuberculosis T46] Length=790 Score = 1600 bits (4142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/790 (99%), Positives = 790/790 (100%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVP+WGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPIWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|289448392|ref|ZP_06438136.1| recombination protein recA [Mycobacterium tuberculosis CPHL_A] gi|289421350|gb|EFD18551.1| recombination protein recA [Mycobacterium tuberculosis CPHL_A] Length=790 Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/790 (99%), Positives = 789/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFG SAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGYSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|289754840|ref|ZP_06514218.1| recombinase A [Mycobacterium tuberculosis EAS054] gi|289695427|gb|EFD62856.1| recombinase A [Mycobacterium tuberculosis EAS054] Length=790 Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/790 (99%), Positives = 789/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQ AGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQDAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|339632749|ref|YP_004724391.1| RECA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RECA intein)] [Mycobacterium africanum GM041182] gi|339332105|emb|CCC27811.1| RECA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RECA intein)] [Mycobacterium africanum GM041182] Length=790 Score = 1598 bits (4139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/790 (99%), Positives = 789/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALI AIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIPAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|254232836|ref|ZP_04926163.1| recA protein (recombinase A) [Mycobacterium tuberculosis C] gi|124601895|gb|EAY60905.1| recA protein (recombinase A) [Mycobacterium tuberculosis C] Length=790 Score = 1598 bits (4137), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/790 (99%), Positives = 789/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLL YLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLCYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|289575434|ref|ZP_06455661.1| recombination protein recA [Mycobacterium tuberculosis K85] gi|289539865|gb|EFD44443.1| recombination protein recA [Mycobacterium tuberculosis K85] Length=790 Score = 1597 bits (4134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 788/790 (99%), Positives = 788/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M QTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALI AIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIPAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|340627737|ref|YP_004746189.1| recombinase A [Mycobacterium canettii CIPT 140010059] gi|2598000|emb|CAA03857.1| RecA protein [Mycobacterium tuberculosis] gi|2598002|emb|CAA03856.1| RecA protein [Mycobacterium tuberculosis] gi|340005927|emb|CCC45094.1| RECA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RECA intein)] [Mycobacterium canettii CIPT 140010059] Length=790 Score = 1591 bits (4120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/790 (99%), Positives = 789/790 (99%), Gaps = 0/790 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGT+DVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTQDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGV DLC++AG++GKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVLDLCRRAGVHGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGV 720 Query 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN Sbjct 721 DQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSN 780 Query 781 DGVLPAPVDF 790 DGVLPAPVDF Sbjct 781 DGVLPAPVDF 790 >gi|289751391|ref|ZP_06510769.1| recombination protein recA [Mycobacterium tuberculosis T92] gi|289691978|gb|EFD59407.1| recombination protein recA [Mycobacterium tuberculosis T92] Length=790 Score = 1501 bits (3887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 755/797 (95%), Positives = 761/797 (96%), Gaps = 14/797 (1%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRM------DVR-RVETLK 233 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRM D + R + + Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMGRAASRDAQGRYQRGR 240 Query 234 DGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHA 293 G + +V + L G R THRIEDVVDGRKPIHVVAAAKDGTLHA Sbjct 241 QPHPGQGRQEQVPRRGHSDLRSGHRY-------THRIEDVVDGRKPIHVVAAAKDGTLHA 293 Query 294 RPVVSWFDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGF 353 RPVVSWFDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGF Sbjct 294 RPVVSWFDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGF 353 Query 354 GDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQG 413 GDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQG Sbjct 354 GDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQG 413 Query 414 RISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESD 473 RISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESD Sbjct 414 RISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESD 473 Query 474 GWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSK 533 GWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSK Sbjct 474 GWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSK 533 Query 534 RQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVL 593 RQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVL Sbjct 534 RQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVL 593 Query 594 NYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAE 653 NYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAE Sbjct 594 NYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAE 653 Query 654 ELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREG 713 ELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREG Sbjct 654 ELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREG 713 Query 714 SLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAV 773 SLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAV Sbjct 714 SLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAV 773 Query 774 VTDDPSNDGVLPAPVDF 790 VTDDPSNDGVLPAPVDF Sbjct 774 VTDDPSNDGVLPAPVDF 790 >gi|289758864|ref|ZP_06518242.1| recombinase A [Mycobacterium tuberculosis T85] gi|289714428|gb|EFD78440.1| recombinase A [Mycobacterium tuberculosis T85] Length=729 Score = 1482 bits (3836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 728/729 (99%), Positives = 729/729 (100%), Gaps = 0/729 (0%) Query 62 VIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPD 121 +IEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPD Sbjct 1 MIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPD 60 Query 122 TGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTG 181 TGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTG Sbjct 61 TGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTG 120 Query 182 ALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGN 241 ALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGN Sbjct 121 ALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGN 180 Query 242 RTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFD 301 RTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFD Sbjct 181 RTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFD 240 Query 302 QGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIPA 361 QGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIPA Sbjct 241 QGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIPA 300 Query 362 DHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIAH 421 DHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIAH Sbjct 301 DHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIAH 360 Query 422 RPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQT 481 RPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQT Sbjct 361 RPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQT 420 Query 482 GALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRI 541 GALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRI Sbjct 421 GALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRI 480 Query 542 SGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERGV 601 SGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERGV Sbjct 481 SGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERGV 540 Query 602 TAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVIR 661 TAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVIR Sbjct 541 TAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVIR 600 Query 662 EVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVD 721 EVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVD Sbjct 601 EVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVD 660 Query 722 QGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSND 781 QGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSND Sbjct 661 QGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSND 720 Query 782 GVLPAPVDF 790 GVLPAPVDF Sbjct 721 GVLPAPVDF 729 >gi|308377116|ref|ZP_07668435.1| putative protein RecA [Mycobacterium tuberculosis SUMu008] gi|308348909|gb|EFP37760.1| putative protein RecA [Mycobacterium tuberculosis SUMu008] Length=714 Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 695/695 (100%), Positives = 695/695 (100%), Gaps = 0/695 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI Sbjct 601 VTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVI 660 Query 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPP 695 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPP Sbjct 661 REVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPP 695 >gi|254551792|ref|ZP_05142239.1| DNA recombination protein RecA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=613 Score = 1236 bits (3197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/609 (100%), Positives = 609/609 (100%), Gaps = 0/609 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF Sbjct 241 NRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWF 300 Query 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP Sbjct 301 DQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIP 360 Query 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA Sbjct 361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIA 420 Query 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ Sbjct 421 HRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQ 480 Query 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR Sbjct 481 TGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVR 540 Query 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG Sbjct 541 ISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERG 600 Query 601 VTAQEAAAM 609 VTAQEAAAM Sbjct 601 VTAQEAAAM 609 >gi|289570913|ref|ZP_06451140.1| recombination protein recA [Mycobacterium tuberculosis T17] gi|289544667|gb|EFD48315.1| recombination protein recA [Mycobacterium tuberculosis T17] Length=447 Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/447 (99%), Positives = 447/447 (100%), Gaps = 0/447 (0%) Query 344 VAQPRRFDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAA 403 +AQPRRFDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAA Sbjct 1 MAQPRRFDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAA 60 Query 404 TLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVG 463 TLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVG Sbjct 61 TLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVG 120 Query 464 NLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPS 523 NLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPS Sbjct 121 NLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPS 180 Query 524 IVNGRRIQSKRQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATY 583 IVNGRRIQSKRQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATY Sbjct 181 IVNGRRIQSKRQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATY 240 Query 584 LAAEMTDAVLNYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALD 643 LAAEMTDAVLNYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALD Sbjct 241 LAAEMTDAVLNYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALD 300 Query 644 DKFLHDMLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDI 703 DKFLHDMLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDI Sbjct 301 DKFLHDMLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDI 360 Query 704 LYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKK 763 LYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKK Sbjct 361 LYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKK 420 Query 764 IKEKLGIGAVVTDDPSNDGVLPAPVDF 790 IKEKLGIGAVVTDDPSNDGVLPAPVDF Sbjct 421 IKEKLGIGAVVTDDPSNDGVLPAPVDF 447 >gi|12084113|pdb|1G18|A Chain A, Reca-Adp-Alf4 Complex gi|12084114|pdb|1G19|A Chain A, Structure Of Reca Protein gi|28948652|pdb|1MO3|A Chain A, Reca-Adp Complex gi|28948653|pdb|1MO4|A Chain A, Reca-Atp-Gamma-S Complex gi|28948654|pdb|1MO5|A Chain A, Reca-Atp-Gamma-S-Mg Complex gi|28948655|pdb|1MO6|A Chain A, Reca-Datp-Mg Complex Length=350 Score = 504 bits (1297), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 254/254 (100%), Positives = 254/254 (100%), Gaps = 0/254 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 Query 241 NRTRVKVVKNKCLA 254 NRTRVKVVKNKCLA Sbjct 241 NRTRVKVVKNKCLA 254 Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 104/134 (78%), Positives = 109/134 (82%), Gaps = 2/134 (1%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + VV + C PFKQAEFDILYGKGISREGSLI Sbjct 219 YASVR--MDVRRVETLKDGTNAVGNRTRVKVVKNKCLAPFKQAEFDILYGKGISREGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD Sbjct 277 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 336 Query 777 DPSNDGVLPAPVDF 790 DPSNDGVLPAPVDF Sbjct 337 DPSNDGVLPAPVDF 350 >gi|47571272|gb|AAT35793.1| RecA [Mycobacterium gordonae] Length=324 Score = 488 bits (1255), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 245/252 (98%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVR+DVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/108 (69%), Positives = 81/108 (75%), Gaps = 2/108 (1%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R L RR T + VV + SPPFKQAEFDILYGKGISREGSLI Sbjct 219 YASVR--LDVRRIETLKDGTNAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKI 764 DMGVDQG IRKSGAWFTYEGEQLGQGKENARNFL+EN D+ +EIEKKI Sbjct 277 DMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGDIGNEIEKKI 324 >gi|47571274|gb|AAT35794.1| RecA [Mycobacterium marinum] gi|47571276|gb|AAT35795.1| RecA [Mycobacterium marinum] Length=324 Score = 487 bits (1254), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPIS+IPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 67/78 (86%), Positives = 73/78 (94%), Gaps = 0/78 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKI 764 RNFL+EN +VA+EIEKKI Sbjct 307 RNFLLENGEVANEIEKKI 324 >gi|183981991|ref|YP_001850282.1| recombinase A RecA [Mycobacterium marinum M] gi|238690925|sp|B2HL06.1|RECA_MYCMM RecName: Full=Protein RecA; AltName: Full=Recombinase A gi|183175317|gb|ACC40427.1| recombinase A RecA [Mycobacterium marinum M] Length=346 Score = 487 bits (1253), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPIS+IPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 89/104 (86%), Positives = 95/104 (92%), Gaps = 4/104 (3%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 RNFL+EN +VA+EIEKKIKEKLGIGAVVTD DGVLPAPVDF Sbjct 307 RNFLLENGEVANEIEKKIKEKLGIGAVVTD----DGVLPAPVDF 346 >gi|240171187|ref|ZP_04749846.1| recombinase A [Mycobacterium kansasii ATCC 12478] Length=349 Score = 487 bits (1253), Expect = 4e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 95/104 (92%), Positives = 99/104 (96%), Gaps = 1/104 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 RNFL+ENADVA+EIEKKIKEKLGIGAVVTDDPSND VLPAPVDF Sbjct 307 RNFLMENADVANEIEKKIKEKLGIGAVVTDDPSND-VLPAPVDF 349 >gi|47571282|gb|AAT35798.1| RecA [Mycobacterium szulgai] Length=309 Score = 486 bits (1252), Expect = 5e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M+Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MSQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAK+LGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 57/63 (91%), Positives = 59/63 (94%), Gaps = 0/63 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNF 749 RNF Sbjct 307 RNF 309 >gi|47571288|gb|AAT35801.1| RecA [Mycobacterium gastri] gi|47571290|gb|AAT35802.1| RecA [Mycobacterium kansasii ATCC 12478] Length=304 Score = 486 bits (1252), Expect = 5e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/58 (90%), Positives = 54/58 (94%), Gaps = 0/58 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKE 744 +V + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKE Sbjct 247 IVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKE 304 >gi|47571270|gb|AAT35792.1| RecA [Mycobacterium gordonae] Length=324 Score = 486 bits (1251), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 244/252 (97%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSV ALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVR+DVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/108 (69%), Positives = 81/108 (75%), Gaps = 2/108 (1%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R L RR T + VV + SPPFKQAEFDILYGKGISREGSLI Sbjct 219 YASVR--LDVRRIETLKDGTNAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKI 764 DMGVDQG IRKSGAWFTYEGEQLGQGKENARNFL+EN D+ +EIEKKI Sbjct 277 DMGVDQGFIRKSGAWFTYEGEQLGQGKENARNFLLENGDIGNEIEKKI 324 >gi|41408946|ref|NP_961782.1| recombinase A [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397305|gb|AAS05165.1| RecA [Mycobacterium avium subsp. paratuberculosis K-10] Length=409 Score = 486 bits (1251), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 242/252 (97%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQ PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 60 MTQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 119 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 120 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 179 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 180 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 239 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 240 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 299 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 300 NRTRVKIVKNKV 311 Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 89/104 (86%), Positives = 97/104 (94%), Gaps = 0/104 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKENA Sbjct 306 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENA 365 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 R FL+EN +VA+EIEKKIKEKLGIGAVVTDD S+DGVLPAPVDF Sbjct 366 RTFLMENDEVANEIEKKIKEKLGIGAVVTDDLSDDGVLPAPVDF 409 >gi|47571280|gb|AAT35797.1| RecA [Mycobacterium szulgai] Length=324 Score = 486 bits (1251), Expect = 7e-135, Method: Compositional matrix adjust. Identities = 242/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M+Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MSQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAK+LGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDIVVIDSV ALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDIVVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/78 (90%), Positives = 74/78 (95%), Gaps = 0/78 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKI 764 RNFL+ENADVA+EIEKKI Sbjct 307 RNFLMENADVANEIEKKI 324 >gi|296171749|ref|ZP_06852908.1| recombination protein A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295893978|gb|EFG73743.1| recombination protein A [Mycobacterium parascrofulaceum ATCC BAA-614] Length=350 Score = 486 bits (1250), Expect = 8e-135, Method: Compositional matrix adjust. Identities = 243/252 (97%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 87/104 (84%), Positives = 95/104 (92%), Gaps = 0/104 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYG+GISREGSLIDMGV+QG IRKSG+WFTYEGEQLGQGKENA Sbjct 247 VVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 R FL+EN +VA+EIEKKIKEKLGIGAVVTD S+D VLPAPVDF Sbjct 307 RTFLMENDEVANEIEKKIKEKLGIGAVVTDGLSDDSVLPAPVDF 350 >gi|118464179|ref|YP_882804.1| recombinase A [Mycobacterium avium 104] gi|254776066|ref|ZP_05217582.1| recombinase A [Mycobacterium avium subsp. avium ATCC 25291] gi|60392996|sp|P62219.1|RECA_MYCPA RecName: Full=Protein RecA; AltName: Full=Recombinase A gi|166220656|sp|A0QIR6.1|RECA_MYCA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A gi|118165466|gb|ABK66363.1| protein RecA [Mycobacterium avium 104] gi|336458945|gb|EGO37900.1| protein RecA [Mycobacterium avium subsp. paratuberculosis S397] Length=350 Score = 486 bits (1250), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 242/252 (97%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQ PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 89/104 (86%), Positives = 97/104 (94%), Gaps = 0/104 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 R FL+EN +VA+EIEKKIKEKLGIGAVVTDD S+DGVLPAPVDF Sbjct 307 RTFLMENDEVANEIEKKIKEKLGIGAVVTDDLSDDGVLPAPVDF 350 >gi|118618697|ref|YP_907029.1| recombinase A [Mycobacterium ulcerans Agy99] gi|166220657|sp|A0PT89.1|RECA_MYCUA RecName: Full=Protein RecA; AltName: Full=Recombinase A gi|118570807|gb|ABL05558.1| recombinase A RecA [Mycobacterium ulcerans Agy99] Length=346 Score = 484 bits (1247), Expect = 2e-134, Method: Compositional matrix adjust. Identities = 242/252 (97%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPIS+IPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEI DMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIVDMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 89/104 (86%), Positives = 94/104 (91%), Gaps = 4/104 (3%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSGAWFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 RNFL+EN VA+EIEKKIKEKLGIGAVVTD DGVLPAPVDF Sbjct 307 RNFLLENGGVANEIEKKIKEKLGIGAVVTD----DGVLPAPVDF 346 >gi|342858398|ref|ZP_08715053.1| recombinase A [Mycobacterium colombiense CECT 3035] gi|342134102|gb|EGT87282.1| recombinase A [Mycobacterium colombiense CECT 3035] Length=346 Score = 484 bits (1246), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 240/252 (96%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPIS+IPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDETRQPISIIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/104 (80%), Positives = 91/104 (88%), Gaps = 4/104 (3%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + +PPFKQAEFDILYG+GISREGSLIDMGV+QG IRKSG+WFTYEGEQLGQGKENA Sbjct 247 IVKNKVAPPFKQAEFDILYGQGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 R FL EN +VA+EIEK IKEKLGIGAVVTDD VLPAPVDF Sbjct 307 RTFLKENDEVANEIEKMIKEKLGIGAVVTDDD----VLPAPVDF 346 >gi|47571254|gb|AAT35784.1| RecA [Mycobacterium intracellulare ATCC 13950] gi|90654496|gb|ABD96034.1| RecA [Mycobacterium indicus pranii] Length=304 Score = 484 bits (1246), Expect = 3e-134, Method: Compositional matrix adjust. Identities = 241/252 (96%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/58 (87%), Positives = 54/58 (94%), Gaps = 0/58 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKE 744 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKE Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKE 304 >gi|254821760|ref|ZP_05226761.1| recombinase A [Mycobacterium intracellulare ATCC 13950] Length=350 Score = 484 bits (1245), Expect = 4e-134, Method: Compositional matrix adjust. Identities = 241/252 (96%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVK+VKNK Sbjct 241 NRTRVKIVKNKV 252 Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 88/104 (85%), Positives = 96/104 (93%), Gaps = 0/104 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKENA Sbjct 247 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF 790 R FL+EN +VA+EIEKKIKEKLGIGAVVTDD S+D VLPAPVDF Sbjct 307 RTFLMENDEVANEIEKKIKEKLGIGAVVTDDLSDDSVLPAPVDF 350 >gi|47571268|gb|AAT35791.1| RecA [Mycobacterium simiae] Length=321 Score = 482 bits (1240), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 241/248 (98%), Positives = 246/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV+E Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VKVVKNK Sbjct 242 VKVVKNKV 249 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 67/78 (86%), Positives = 73/78 (94%), Gaps = 0/78 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKEN Sbjct 244 VVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENV 303 Query 747 RNFLVENADVADEIEKKI 764 RNFL+ENAD+A+EIEKKI Sbjct 304 RNFLMENADIANEIEKKI 321 >gi|47571262|gb|AAT35788.1| RecA [Mycobacterium sp. ATCC 35788] Length=307 Score = 481 bits (1239), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 241/248 (98%), Positives = 246/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV+E Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VKVVKNK Sbjct 242 VKVVKNKV 249 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/64 (86%), Positives = 59/64 (93%), Gaps = 0/64 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYG+GISREGSLIDMGV+QG IRKSG+WFTYEGEQLGQGKENA Sbjct 244 VVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENA 303 Query 747 RNFL 750 R FL Sbjct 304 RTFL 307 >gi|47571278|gb|AAT35796.1| RecA [Mycobacterium xenopi] Length=324 Score = 481 bits (1238), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 235/252 (94%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQ PDREKALELAVAQIEKSYGKGSVMRLGDE+RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQAPDREKALELAVAQIEKSYGKGSVMRLGDESRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 R++EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RIVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQA+RKM Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAMRKMA 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+K+GVMFGSPETTTGGKALKFYASVR+DV R+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVSRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTR+KVVKNKC Sbjct 241 NRTRIKVVKNKC 252 Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 68/78 (88%), Positives = 74/78 (95%), Gaps = 0/78 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + C+PPF+QAE DILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA Sbjct 247 VVKNKCAPPFRQAELDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 306 Query 747 RNFLVENADVADEIEKKI 764 RNFL++N DVA+EIEKKI Sbjct 307 RNFLLQNTDVANEIEKKI 324 >gi|47571260|gb|AAT35787.1| RecA [Mycobacterium scrofulaceum] Length=319 Score = 481 bits (1237), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 240/248 (97%), Positives = 245/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV+E Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDI+VIDSV ALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDILVIDSVTALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VKVVKNK Sbjct 242 VKVVKNKV 249 Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/76 (83%), Positives = 70/76 (93%), Gaps = 0/76 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYG+GISREGSLIDMGV+QG IRKSG+WFTYEGEQLGQGKENA Sbjct 244 VVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENA 303 Query 747 RNFLVENADVADEIEK 762 R FL+EN +VA+EIEK Sbjct 304 RTFLMENDEVANEIEK 319 >gi|47571256|gb|AAT35785.1| RecA [Mycobacterium avium subsp. avium ATCC 25291] gi|47571258|gb|AAT35786.1| RecA [Mycobacterium avium] Length=321 Score = 480 bits (1236), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 239/248 (97%), Positives = 246/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV+E Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALDVALGIGGLPRGRVVE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDI+VIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDILVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VK+VKNK Sbjct 242 VKIVKNKV 249 Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 65/78 (84%), Positives = 72/78 (93%), Gaps = 0/78 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 +V + SPPFKQAEFDILYG+GISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKENA Sbjct 244 IVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENA 303 Query 747 RNFLVENADVADEIEKKI 764 R FL+EN +VA+EIEKKI Sbjct 304 RTFLMENDEVANEIEKKI 321 >gi|47571292|gb|AAT35803.1| RecA [Mycobacterium shimoidei] Length=304 Score = 479 bits (1232), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 237/252 (95%), Positives = 249/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 MTQ PDREKA+ELA+AQIEK++GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MTQAPDREKAIELAIAQIEKNHGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/88 (65%), Positives = 64/88 (73%), Gaps = 2/88 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + + VV + SPPFKQAEFDILYGKGISREGSLI Sbjct 219 YASVR--MDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKE 744 DMGVDQG IRKSG+WFTYEGEQLGQGKE Sbjct 277 DMGVDQGFIRKSGSWFTYEGEQLGQGKE 304 >gi|47571264|gb|AAT35789.1| RecA [Mycobacterium asiaticum] Length=307 Score = 478 bits (1231), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 241/248 (98%), Positives = 244/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRVIE Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRVIE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR IGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLRGTIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VKVVKNK Sbjct 242 VKVVKNKV 249 Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 58/64 (91%), Positives = 60/64 (94%), Gaps = 0/64 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSG+WFTYEGEQLGQGKENA Sbjct 244 VVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENA 303 Query 747 RNFL 750 RNFL Sbjct 304 RNFL 307 >gi|47571266|gb|AAT35790.1| RecA [Mycobacterium asiaticum] Length=307 Score = 478 bits (1230), Expect = 2e-132, Method: Compositional matrix adjust. Identities = 241/248 (98%), Positives = 244/248 (99%), Gaps = 0/248 (0%) Query 5 PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64 PDREKALELA+AQIEKSYGKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRVIE Sbjct 2 PDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRVIE 61 Query 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDP+YAKKLGVDTDSLLVSQPDTGE Sbjct 62 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGE 121 Query 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN Sbjct 122 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 181 Query 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244 NSGTTAIFINQLR IGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGTNAVGNRTR Sbjct 182 NSGTTAIFINQLRGTIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTR 241 Query 245 VKVVKNKC 252 VKVVKNK Sbjct 242 VKVVKNKV 249 Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 57/64 (90%), Positives = 60/64 (94%), Gaps = 0/64 (0%) Query 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 VV + SPPFKQAEFDILYGKGISREGSLIDMGVDQG IRKSG+WFTYEGEQ+GQGKENA Sbjct 244 VVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGSWFTYEGEQIGQGKENA 303 Query 747 RNFL 750 RNFL Sbjct 304 RNFL 307 >gi|31540539|gb|AAP49232.1| RecA [Mycobacterium album] Length=308 Score = 473 bits (1218), Expect = 5e-131, Method: Compositional matrix adjust. Identities = 234/250 (94%), Positives = 247/250 (99%), Gaps = 0/250 (0%) Query 3 QTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRV 62 Q PDREKALELA+AQI+K++GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV Sbjct 4 QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63 Query 63 IEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDT 122 IEIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQPDT Sbjct 64 IEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123 Query 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGA 182 GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMTGA Sbjct 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183 Query 183 LNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNR 242 LNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGT+AVGNR Sbjct 184 LNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNR 243 Query 243 TRVKVVKNKC 252 TRVK+VKNK Sbjct 244 TRVKIVKNKV 253 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/91 (62%), Positives = 66/91 (73%), Gaps = 2/91 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + + +V + SPPFKQAEFDILYG+GISREGSLI Sbjct 220 YASVR--MDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLI 277 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENAR 747 DMGV+ G IRKSG+WFTYEGEQLGQGKENAR Sbjct 278 DMGVEHGFIRKSGSWFTYEGEQLGQGKENAR 308 >gi|42416865|gb|AAS16314.1| RecA [Mycobacterium houstonense] gi|42416869|gb|AAS16316.1| RecA [Mycobacterium farcinogenes] gi|42416879|gb|AAS16321.1| RecA [Mycobacterium senegalense] Length=349 Score = 473 bits (1217), Expect = 6e-131, Method: Compositional matrix adjust. Identities = 233/250 (94%), Positives = 247/250 (99%), Gaps = 0/250 (0%) Query 3 QTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRV 62 Q PDREKALELA+AQI+K++GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV Sbjct 4 QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63 Query 63 IEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDT 122 +EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQPDT Sbjct 64 VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123 Query 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGA 182 GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMTGA Sbjct 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183 Query 183 LNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNR 242 LNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGT+AVGNR Sbjct 184 LNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNR 243 Query 243 TRVKVVKNKC 252 TRVK+VKNK Sbjct 244 TRVKIVKNKV 253 Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/134 (67%), Positives = 102/134 (77%), Gaps = 4/134 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + + +V + SPPFKQAEFDILYG+GISREGSLI Sbjct 220 YASVR--MDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLI 277 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGV+ G IRKSG+WFTYEGEQLGQGKENAR FL+EN DVA+EIEKKIKEKLGIGAVVT Sbjct 278 DMGVEHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDVANEIEKKIKEKLGIGAVVTA 337 Query 777 DPSNDGVLPAPVDF 790 + D VLPAPVDF Sbjct 338 EA--DDVLPAPVDF 349 >gi|42416885|gb|AAS16324.1| RecA [Mycobacterium chelonae] Length=346 Score = 473 bits (1217), Expect = 7e-131, Method: Compositional matrix adjust. Identities = 232/252 (93%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+ ++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAISLLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/134 (70%), Positives = 104/134 (78%), Gaps = 6/134 (4%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGV+QG IRKSG+WFTYEGEQLGQGKENARNFL+EN DVA+EIEKKIKEKLGIGAV+TD Sbjct 277 DMGVEQGFIRKSGSWFTYEGEQLGQGKENARNFLLENVDVANEIEKKIKEKLGIGAVLTD 336 Query 777 DPSNDGVLPAPVDF 790 D V+PAPVDF Sbjct 337 DE----VVPAPVDF 346 >gi|42416899|gb|AAS16331.1| RecA [Mycobacterium wolinskyi] Length=349 Score = 473 bits (1216), Expect = 7e-131, Method: Compositional matrix adjust. Identities = 233/250 (94%), Positives = 247/250 (99%), Gaps = 0/250 (0%) Query 3 QTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRV 62 Q PDREKALELA+AQI+K++GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV Sbjct 4 QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63 Query 63 IEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDT 122 +EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQPDT Sbjct 64 VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123 Query 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGA 182 GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMTGA Sbjct 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183 Query 183 LNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNR 242 LNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGT+AVGNR Sbjct 184 LNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNR 243 Query 243 TRVKVVKNKC 252 TRVK+VKNK Sbjct 244 TRVKIVKNKV 253 Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 85/134 (64%), Positives = 99/134 (74%), Gaps = 4/134 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + + +V + SPPFKQAEFDILYG+GISREGSLI Sbjct 220 YASVR--MDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLI 277 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGV+ G IRKSG+WFTYEGEQLGQGKENAR FL+EN D A+EIEK+IKEKLGIGA VT Sbjct 278 DMGVEHGFIRKSGSWFTYEGEQLGQGKENARKFLLENVDAANEIEKRIKEKLGIGADVT- 336 Query 777 DPSNDGVLPAPVDF 790 + D LPAPVDF Sbjct 337 -AAADEALPAPVDF 349 >gi|93278392|gb|ABF06626.1| RecA [Mycobacterium gadium] Length=312 Score = 473 bits (1216), Expect = 8e-131, Method: Compositional matrix adjust. Identities = 235/252 (94%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEK++GKGSVMRLG+E RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIEKNHGKGSVMRLGEEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRK+T Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GAL+NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVR+DVRR+ETLKDGT+AVG Sbjct 181 GALSNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/96 (64%), Positives = 71/96 (74%), Gaps = 2/96 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YASVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVE 752 DMGV+ G +RKSG+WFTYEGEQLGQGKENARNFL+E Sbjct 277 DMGVEHGFVRKSGSWFTYEGEQLGQGKENARNFLLE 312 >gi|31540537|gb|AAP49231.1| RecA [Mycobacterium album] Length=308 Score = 473 bits (1216), Expect = 8e-131, Method: Compositional matrix adjust. Identities = 233/250 (94%), Positives = 247/250 (99%), Gaps = 0/250 (0%) Query 3 QTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRV 62 Q PDREKALELA+AQI+K++GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRGRV Sbjct 4 QAPDREKALELAMAQIDKNFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRGRV 63 Query 63 IEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDT 122 +EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQPDT Sbjct 64 VEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDT 123 Query 123 GEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGA 182 GEQALEIADML+RSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMTGA Sbjct 124 GEQALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGA 183 Query 183 LNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNR 242 LNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVRMDVRR+ETLKDGT+AVGNR Sbjct 184 LNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNR 243 Query 243 TRVKVVKNKC 252 TRVK+VKNK Sbjct 244 TRVKIVKNKV 253 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/91 (62%), Positives = 66/91 (73%), Gaps = 2/91 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R + RR T + + +V + SPPFKQAEFDILYG+GISREGSLI Sbjct 220 YASVR--MDVRRIETLKDGTDAVGNRTRVKIVKNKVSPPFKQAEFDILYGQGISREGSLI 277 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENAR 747 DMGV+ G IRKSG+WFTYEGEQLGQGKENAR Sbjct 278 DMGVEHGFIRKSGSWFTYEGEQLGQGKENAR 308 >gi|31540549|gb|AAP49237.1| RecA [Mycobacterium gadium] Length=322 Score = 473 bits (1216), Expect = 8e-131, Method: Compositional matrix adjust. Identities = 235/252 (94%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEK++GKGSVMRLG+E RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIEKNHGKGSVMRLGEEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRK+T Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GAL+NSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFYASVR+DVRR+ETLKDGT+AVG Sbjct 181 GALSNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/106 (66%), Positives = 80/106 (76%), Gaps = 2/106 (1%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 Y+ +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YASVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEK 762 DMGV+ G +RKSG+WFTYEGEQLGQGKENARNFL+EN DVA+EIEK Sbjct 277 DMGVEHGFVRKSGSWFTYEGEQLGQGKENARNFLLENPDVANEIEK 322 >gi|31540543|gb|AAP49234.1| RecA [Mycobacterium chelonae] gi|31540545|gb|AAP49235.1| RecA [Mycobacterium chelonae] Length=307 Score = 472 bits (1215), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 232/252 (93%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDPDYAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+ ++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAISLLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/91 (66%), Positives = 67/91 (74%), Gaps = 2/91 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENAR 747 DMGV+QG IRKSG+WFTYEGEQLGQGKENAR Sbjct 277 DMGVEQGFIRKSGSWFTYEGEQLGQGKENAR 307 >gi|42416875|gb|AAS16319.1| RecA [Mycobacterium chelonae] Length=346 Score = 472 bits (1215), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 231/252 (92%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+ ++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAISLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/134 (70%), Positives = 104/134 (78%), Gaps = 6/134 (4%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGV+QG IRKSG+WFTYEGEQLGQGKENARNFL+EN DVA+EIEKKIKEKLGIGAV+TD Sbjct 277 DMGVEQGFIRKSGSWFTYEGEQLGQGKENARNFLLENVDVANEIEKKIKEKLGIGAVLTD 336 Query 777 DPSNDGVLPAPVDF 790 D V+PAPVDF Sbjct 337 DE----VVPAPVDF 346 >gi|31540535|gb|AAP49230.1| RecA [Mycobacterium abscessus ATCC 19977] Length=306 Score = 472 bits (1214), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 232/252 (93%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQ AGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+D++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/90 (66%), Positives = 66/90 (74%), Gaps = 2/90 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746 DMGV+QG IRKSG+WFTYEGEQLGQGKENA Sbjct 277 DMGVEQGFIRKSGSWFTYEGEQLGQGKENA 306 >gi|336441122|gb|AEI54786.1| recombinase A [Mycobacterium franklinii] Length=346 Score = 471 bits (1213), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 231/252 (92%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RV+EIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+ ++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAISLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/134 (69%), Positives = 103/134 (77%), Gaps = 6/134 (4%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGIS+EGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISKEGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTD 776 DMGV+ G IRKSG+WFTYEGEQLGQGKENARNFL+EN DVA+EIEKKIKEKLGIGAV+T Sbjct 277 DMGVEHGFIRKSGSWFTYEGEQLGQGKENARNFLLENVDVANEIEKKIKEKLGIGAVLT- 335 Query 777 DPSNDGVLPAPVDF 790 ND V+PAPVDF Sbjct 336 ---NDEVVPAPVDF 346 >gi|47571296|gb|AAT35805.1| RecA [Mycobacterium triviale] Length=304 Score = 471 bits (1213), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 233/252 (93%), Positives = 248/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQIEKS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQVPDREKALELALAQIEKSHGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQAAGG+AAFIDAEHALDP+YAK+LGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKRLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADMLIRSGALDI+VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQA+RKMT Sbjct 121 DTGEQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAMRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GAL+NSGTTAIFINQLR+K+GVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALSNSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/88 (65%), Positives = 63/88 (72%), Gaps = 2/88 (2%) Query 657 YSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLI 716 YS +R L RR T + + VV + SPPFKQAEFDILYGKGISREGSLI Sbjct 219 YSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGKGISREGSLI 276 Query 717 DMGVDQGLIRKSGAWFTYEGEQLGQGKE 744 DMGVD G IRKSG+W+TYEGEQLGQGKE Sbjct 277 DMGVDHGFIRKSGSWYTYEGEQLGQGKE 304 >gi|169630143|ref|YP_001703792.1| RecA protein [Mycobacterium abscessus ATCC 19977] gi|226723635|sp|B1MD17.1|RECA_MYCA9 RecName: Full=Protein RecA; AltName: Full=Recombinase A gi|42416881|gb|AAS16322.1| RecA [Mycobacterium abscessus] 6 more sequence titles Length=346 Score = 471 bits (1213), Expect = 2e-130, Method: Compositional matrix adjust. Identities = 232/252 (93%), Positives = 247/252 (99%), Gaps = 0/252 (0%) Query 1 MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRG 60 M Q PDREKALELA+AQI+KS+GKGSVMRLGDE RQPISVIPTGSIALDVALGIGGLPRG Sbjct 1 MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALDVALGIGGLPRG 60 Query 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQP 120 RVIEIYGPESSGKTTVALHAVANAQ AGG+AAFIDAEHALDP+YAKKLGVDTDSLLVSQP Sbjct 61 RVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQP 120 Query 121 DTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMT 180 DTGEQALEIADML+RSGA+D++VIDSVAALVPRAE+EGEMGDSHVGLQARLMSQALRKMT Sbjct 121 DTGEQALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMT 180 Query 181 GALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVG 240 GALNNSGTTAIFINQLR+KIGVMFGSPETTTGGKALKFY+SVR+DVRR+ETLKDGT+AVG Sbjct 181 GALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYSSVRLDVRRIETLKDGTDAVG 240 Query 241 NRTRVKVVKNKC 252 NRTRVKVVKNK Sbjct 241 NRTRVKVVKNKV 252 Lambda K H 0.318 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1904101588008 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40