BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2757c

Length=138
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609894|ref|NP_217273.1|  hypothetical protein Rv2757c [Mycob...   283    6e-75
gi|308378090|ref|ZP_07668665.1|  putative type I restriction-modi...   281    3e-74
gi|340627758|ref|YP_004746210.1|  hypothetical protein MCAN_27841...   280    4e-74
gi|254383838|ref|ZP_04999186.1|  conserved hypothetical protein [...   124    3e-27
gi|345013748|ref|YP_004816102.1|  PilT protein domain-containing ...   124    5e-27
gi|284991226|ref|YP_003409780.1|  PilT protein domain-containing ...   123    1e-26
gi|254388989|ref|ZP_05004220.1|  conserved membrane protein [Stre...   122    2e-26
gi|302559325|ref|ZP_07311667.1|  PIN family toxin-antitoxin syste...   121    3e-26
gi|302544584|ref|ZP_07296926.1|  PIN family toxin-antitoxin syste...   120    5e-26
gi|297154824|gb|ADI04536.1|  hypothetical protein SBI_01415 [Stre...   120    7e-26
gi|343479040|gb|AEM44209.1|  hypothetical protein [uncultured bac...   119    1e-25
gi|290958509|ref|YP_003489691.1|  hypothetical protein SCAB_40681...   119    2e-25
gi|302536099|ref|ZP_07288441.1|  conserved hypothetical protein [...   118    3e-25
gi|297160784|gb|ADI10496.1|  hypothetical protein SBI_07376 [Stre...   116    1e-24
gi|302557955|ref|ZP_07310297.1|  PIN family toxin-antitoxin syste...   115    2e-24
gi|315504329|ref|YP_004083216.1|  pilt protein domain-containing ...   115    2e-24
gi|302869194|ref|YP_003837831.1|  PilT protein domain-containing ...   115    3e-24
gi|297199892|ref|ZP_06917289.1|  conserved hypothetical protein [...   111    3e-23
gi|311897824|dbj|BAJ30232.1|  hypothetical protein KSE_44490 [Kit...   110    9e-23
gi|167968774|ref|ZP_02551051.1|  hypothetical protein MtubH3_1235...   107    7e-22
gi|289572808|ref|ZP_06453035.1|  toxin [Mycobacterium tuberculosi...   106    1e-21
gi|15607370|ref|NP_214743.1|  hypothetical protein Rv0229c [Mycob...   105    2e-21
gi|289445761|ref|ZP_06435505.1|  toxin [Mycobacterium tuberculosi...   103    7e-21
gi|240172880|ref|ZP_04751539.1|  hypothetical protein MkanA1_2644...  89.4    1e-16
gi|289748705|ref|ZP_06508083.1|  LOW QUALITY PROTEIN: conserved m...  89.4    2e-16
gi|302534504|ref|ZP_07286846.1|  predicted protein [Streptomyces ...  87.8    4e-16
gi|302546829|ref|ZP_07299171.1|  PIN family toxin-antitoxin syste...  87.0    7e-16
gi|291452355|ref|ZP_06591745.1|  conserved hypothetical protein [...  84.0    7e-15
gi|158318849|ref|YP_001511357.1|  PilT domain-containing protein ...  83.2    1e-14
gi|239988547|ref|ZP_04709211.1|  hypothetical protein SrosN1_1465...  82.4    2e-14
gi|297163315|gb|ADI13027.1|  PilT protein domain protein [Strepto...  81.6    3e-14
gi|284034116|ref|YP_003384047.1|  PilT protein domain-containing ...  79.7    1e-13
gi|296128792|ref|YP_003636042.1|  PilT protein domain protein [Ce...  79.3    2e-13
gi|294629213|ref|ZP_06707773.1|  PIN family toxin-antitoxin syste...  78.6    3e-13
gi|269124363|ref|YP_003297733.1|  PilT protein domain-containing ...  78.6    3e-13
gi|336119997|ref|YP_004574775.1|  hypothetical protein MLP_43580 ...  78.2    4e-13
gi|306780585|ref|ZP_07418922.1|  toxin [Mycobacterium tuberculosi...  78.2    4e-13
gi|167968845|ref|ZP_02551122.1|  hypothetical protein MtubH3_1276...  77.8    5e-13
gi|15609683|ref|NP_217062.1|  hypothetical protein Rv2546 [Mycoba...  77.8    5e-13
gi|15842082|ref|NP_337119.1|  hypothetical protein MT2622 [Mycoba...  77.8    5e-13
gi|289748072|ref|ZP_06507450.1|  conserved hypothetical protein [...  77.0    7e-13
gi|315446124|ref|YP_004079003.1|  nucleic acid-binding protein, c...  77.0    8e-13
gi|229598010|pdb|3H87|A  Chain A, Rv0301 Rv0300 Toxin Antitoxin C...  77.0    8e-13
gi|15607442|ref|NP_214815.1|  hypothetical protein Rv0301 [Mycoba...  77.0    9e-13
gi|145225766|ref|YP_001136444.1|  PilT domain-containing protein ...  77.0    9e-13
gi|339630376|ref|YP_004722018.1|  hypothetical protein MAF_03030 ...  74.7    5e-12
gi|339295424|gb|AEJ47535.1|  hypothetical protein CCDC5079_2345 [...  71.6    3e-11
gi|336117846|ref|YP_004572614.1|  hypothetical protein MLP_21970 ...  71.6    4e-11
gi|297193814|ref|ZP_06911212.1|  conserved hypothetical protein [...  67.8    5e-10
gi|315441643|ref|YP_004074520.1|  nucleic acid-binding protein, c...  67.0    8e-10


>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
 gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
 gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=138

 Score =  283 bits (724),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120

Query  121  IAAITRQPVEWVVAPGTA  138
            IAAITRQPVEWVVAPGTA
Sbjct  121  IAAITRQPVEWVVAPGTA  138


>gi|308378090|ref|ZP_07668665.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
 gi|308353571|gb|EFP42422.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
Length=718

 Score =  281 bits (719),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct  11   MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  70

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct  71   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  130

Query  121  IAAITRQPVEWVVAP  135
            IAAITRQPVEWVVAP
Sbjct  131  IAAITRQPVEWVVAP  145


>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT 
140010059]
 gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138

 Score =  280 bits (717),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 137/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            RDALEYVNTPDTVW RAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct  61   RDALEYVNTPDTVWDRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120

Query  121  IAAITRQPVEWVVAPGTA  138
            IAAITRQPVEWVVAPGTA
Sbjct  121  IAAITRQPVEWVVAPGTA  138


>gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194342731|gb|EDX23697.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=138

 Score =  124 bits (312),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 67/138 (49%), Positives = 89/138 (65%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M+ R+L+DKSA  R   PAV   ++PL   GLLA CG  +LE   SARS+ D R +    
Sbjct  1    MSERFLIDKSALARYPKPAVHAVIDPLHNAGLLAVCGAVELEVMYSARSKADARRV-REG  59

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A +++ TPD  W RA E+Q+AL  +G  ++V +PDLIIAA AE HG  V+HYD D++ 
Sbjct  60   MAAFDWLPTPDEAWDRALEVQDALIGEGNWKAVSLPDLIIAATAERHGATVLHYDGDYDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IAA+T QP+ WVV  G A
Sbjct  120  IAAVTGQPMRWVVPRGAA  137


>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger 
Tu 4113]
 gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139

 Score =  124 bits (311),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 64/138 (47%), Positives = 87/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M+ R+L+D SA  R   P V   L+PL E G+LA CG  ++E   SAR+  D + L  + 
Sbjct  1    MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEMEVMYSARNDNDAKRLHWFL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
                +Y+  PD VW RA +IQ     KG HR++ +PDL+IAA AE H + V+HYDQD++ 
Sbjct  61   S-GFDYLPMPDEVWDRAKDIQRQAITKGNHRALSMPDLLIAAAAERHAVTVLHYDQDYDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IAAIT QP++WV   GTA
Sbjct  120  IAAITGQPMKWVTEAGTA  137


>gi|284991226|ref|YP_003409780.1| PilT protein domain-containing protein [Geodermatophilus obscurus 
DSM 43160]
 gi|284064471|gb|ADB75409.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=141

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 67/137 (49%), Positives = 85/137 (63%), Gaps = 0/137 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            +  RYLLD SAA R   P V  R+ PL+  GLLA C   DLE   SARS  ++R +   R
Sbjct  3    VVARYLLDTSAAARVPAPQVADRVVPLLSAGLLATCAALDLEALYSARSPREYREVRADR  62

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            R A EY+ T D  W RA ++Q AL D G  R V + DL+I+AVAE H + V+HYD DF+ 
Sbjct  63   RLAYEYLPTEDGDWQRALQVQAALADAGRWRGVGLADLVISAVAERHRVTVLHYDGDFDG  122

Query  121  IAAITRQPVEWVVAPGT  137
            +AA+T Q  EWVV  G+
Sbjct  123  VAAVTGQRTEWVVPAGS  139


>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
 gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus 
ATCC 27064]
 gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139

 Score =  122 bits (305),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 67/136 (50%), Positives = 86/136 (64%), Gaps = 3/136 (2%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDH-RTLGTYRRD  62
            RYL+D S   RA  P VR  LEP + RGL+   GI DLE   SAR+ +D+ R LG  RR 
Sbjct  5    RYLVDMSVWARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYERMLG--RRQ  62

Query  63   ALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
            A E+  T D +  RA E+Q     KG HR++ IPDL++AA AE HG+ ++HYD DF+ IA
Sbjct  63   AFEWFPTTDEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDLIA  122

Query  123  AITRQPVEWVVAPGTA  138
             +T Q  EW+V  GTA
Sbjct  123  EVTGQLTEWIVPRGTA  138


>gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302476943|gb|EFL40036.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=139

 Score =  121 bits (304),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 67/138 (49%), Positives = 88/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M   YL+DKSA  R   P+V+  L+PL ER LLA C  T+ E   SAR   +   + T+ 
Sbjct  1    MQDHYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEYEMIHSARDSSEATRISTWL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A +Y+ T D V+ RA EIQ    + GFHR++ +PDL+IAA AE H   V+HYD DF+ 
Sbjct  61   H-AFDYLRTDDDVFTRALEIQRHALNAGFHRALSLPDLLIAATAELHRRTVLHYDGDFDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IA++T QP EWVVAPG+A
Sbjct  120  IASLTGQPAEWVVAPGSA  137


>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=138

 Score =  120 bits (302),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 65/138 (48%), Positives = 84/138 (61%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M+ RYL+DKSA  R+  PAVR  L PL ERGLL   G  ++E   SAR+  +   LG + 
Sbjct  1    MSHRYLIDKSALARSARPAVRETLNPLHERGLLCVTGAVEVEILYSARNANEADRLGRWL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
                +Y+  PD VW  A +IQ     KG HR+  + DL+IAA A+ HG  V+HYD D+++
Sbjct  61   T-GFDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIAATAQRHGATVLHYDGDYDQ  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IAAIT  P  WV  PGTA
Sbjct  120  IAAITGYPSRWVAEPGTA  137


>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis 
BCW-1]
Length=139

 Score =  120 bits (301),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 63/138 (46%), Positives = 87/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M+ R+L+D SA  R   P V   L+PL E G+LA CG  ++E   SAR+  D + L  + 
Sbjct  1    MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEIEVMYSARNENDAKRLHWFL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
                +Y+   D VW RA ++Q     KG HR++ +PDL+IAA AE H + V+HYDQD++ 
Sbjct  61   A-GFDYLPMTDEVWDRAKDVQRQAIAKGNHRALSMPDLLIAAAAERHVVTVLHYDQDYDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IAAIT QP++WVV  GTA
Sbjct  120  IAAITGQPMKWVVEAGTA  137


>gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bacterium]
Length=139

 Score =  119 bits (298),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 65/138 (48%), Positives = 88/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  RYL+DKSA  R   P+V+  L+PL ER LLA C  T+ E   SAR   +   + T+ 
Sbjct  1    MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDGSEATRISTWL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A +Y+ T D  ++RA EIQ    + GFHR++ +PDL+IAA AE +   V+HYD DF+ 
Sbjct  61   H-AFDYLRTDDDTFIRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IA++T QP EWVV PG+A
Sbjct  120  IASLTGQPTEWVVPPGSA  137


>gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681 [Streptomyces scabiei 87.22]
 gi|260648035|emb|CBG71143.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139

 Score =  119 bits (298),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 65/138 (48%), Positives = 87/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  RYL+DKSA  R   P+V+  L+PL ER LLA C  T+ E   SAR   +   + T+ 
Sbjct  1    MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDSSEATRISTWL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A +Y+ T D  + RA EIQ    + GFHR++ +PDL+IAA AE +   V+HYD DF+ 
Sbjct  61   H-AFDYLRTDDDTFTRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IA++T QP EWVV PG+A
Sbjct  120  IASLTGQPTEWVVPPGSA  137


>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138

 Score =  118 bits (296),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 64/138 (47%), Positives = 87/138 (64%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            MT R+L+DKSA  R   PAVR  ++PL   G+L  CG  +LE   SARS+ D   +    
Sbjct  1    MTGRFLIDKSALARYPKPAVRAVIDPLHVAGVLGVCGAVELEVLYSARSKGDADRV-RAG  59

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A  +++TPD VW RA ++Q+ L   G  ++V +PDL+IAA AE HG  V+HYD D++ 
Sbjct  60   LGAFAWLSTPDEVWDRALDVQKQLIVAGNWKAVSLPDLVIAATAERHGATVLHYDGDYDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IA +T QP+ WVV  GTA
Sbjct  120  IAEVTGQPMRWVVPRGTA  137


>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis 
BCW-1]
Length=138

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 64/138 (47%), Positives = 83/138 (61%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            MT RYL+DKSA  R   PA R  +EPL   GLLA CG  +LE   SARS+ D   +    
Sbjct  1    MTDRYLIDKSALARYPKPAARAVIEPLHNAGLLAVCGAVELEVLHSARSKGDAERIRDEM  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            R   +++ TPD  W RA E+Q  L   G  +++ + DL+IAA AE H + V+HYD D++ 
Sbjct  61   R-GFDWLPTPDEAWDRALEVQTQLIAAGNWKALSVSDLVIAATAERHSVIVLHYDGDYDM  119

Query  121  IAAITRQPVEWVVAPGTA  138
            IAA+T Q   WVV  GTA
Sbjct  120  IAAVTGQSTRWVVPSGTA  137


>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=136

 Score =  115 bits (289),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 63/135 (47%), Positives = 85/135 (63%), Gaps = 1/135 (0%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            RYL+DKSA  R   PAVR  L+PL++RGLLA  G  ++E   SAR+  +   L  Y    
Sbjct  2    RYLIDKSALARRAKPAVRGVLDPLIQRGLLAVTGAVEMEILYSARNPAEAGKL-RYWLAG  60

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
             +Y+  PD  W RA ++Q   T  G HR++ + DL+IAA AE HG+ V+HYD+D+E+IA 
Sbjct  61   FDYLPCPDECWDRAKDVQAQATRTGNHRALSMADLLIAATAERHGVRVLHYDEDYEQIAE  120

Query  124  ITRQPVEWVVAPGTA  138
            +T Q  EWV   GTA
Sbjct  121  LTGQAHEWVAPAGTA  135


>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
 gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 65/135 (49%), Positives = 83/135 (62%), Gaps = 1/135 (0%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            RYLLDKSA  R   PAV   L+ L +RGLLA CG  ++E   SARS +D +      R  
Sbjct  5    RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVVHSARSAKDAKRARWLLR-G  63

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
             +++  PD +W RA +IQ     KG HR++ + DL+IAA AE HG+ V+HYD DF+ I A
Sbjct  64   FDWLAMPDDIWDRAIDIQVQALHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITA  123

Query  124  ITRQPVEWVVAPGTA  138
            IT QP  WVV  G A
Sbjct  124  ITGQPTTWVVPAGKA  138


>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca 
ATCC 27029]
 gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139

 Score =  115 bits (287),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 65/135 (49%), Positives = 83/135 (62%), Gaps = 1/135 (0%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            RYLLDKSA  R   PAV   L+ L +RGLLA CG  ++E   SARS +D +      R  
Sbjct  5    RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVIHSARSAKDAKRARWLLR-G  63

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
             +++  PD +W RA +IQ     KG HR++ + DL+IAA AE HG+ V+HYD DF+ I A
Sbjct  64   FDWLAMPDDIWDRAIDIQVQTLHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITA  123

Query  124  ITRQPVEWVVAPGTA  138
            IT QP  WVV  G A
Sbjct  124  ITGQPTTWVVPAGKA  138


>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 58/135 (43%), Positives = 80/135 (60%), Gaps = 0/135 (0%)

Query  3    TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRD  62
            T YL+D SA  R      R R E  +E GL++RC +T++EF  SAR+ ED   L      
Sbjct  4    TAYLIDTSALVRILKHPARPRWEKPLEEGLISRCPMTEVEFLYSARNAEDRSELVQDLDA  63

Query  63   ALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
               +    D    RAW++Q  LT+KG HRS    DL++AA AE  G+ ++HYD DFE IA
Sbjct  64   LFGWTPLDDRAVSRAWDVQRELTEKGQHRSAGAVDLLVAATAELQGLTMLHYDNDFETIA  123

Query  123  AITRQPVEWVVAPGT  137
            ++T QP +W+ APG+
Sbjct  124  SVTGQPTQWLAAPGS  138


>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139

 Score =  110 bits (274),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 61/135 (46%), Positives = 84/135 (63%), Gaps = 1/135 (0%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            R+L+DKSA  R   PAVR  L+ L +R LLA     ++E   SAR+  +   L    R  
Sbjct  5    RFLIDKSALARWGKPAVRPVLDDLSQRALLAISPTVEMEVLYSARTLAEAERLRHLLR-G  63

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
             +Y++ PD VW RA ++Q+    +G HR++ + DL+IAA AE HG+ V+HYD D++ IAA
Sbjct  64   FDYLSCPDEVWDRAKQVQQQALFRGNHRALSMADLLIAATAERHGVTVLHYDGDYDMIAA  123

Query  124  ITRQPVEWVVAPGTA  138
            IT QP  WVV  GTA
Sbjct  124  ITGQPARWVVPAGTA  138


>gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_12355 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797151|ref|YP_003030152.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|308231499|ref|ZP_07412656.2| toxin [Mycobacterium tuberculosis SUMu001]
 27 more sequence titles
 Length=137

 Score =  107 bits (267),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + + L    
Sbjct  1    MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA  59

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  60   LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  118

Query  121  IAAITRQPVEWVVAPGT  137
            IAA+T QP +W+V  GT
Sbjct  119  IAAVTGQPCQWIVPAGT  135


>gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosis K85]
 gi|289537239|gb|EFD41817.1| toxin [Mycobacterium tuberculosis K85]
Length=547

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + + L    
Sbjct  411  MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA  469

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  470  LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  528

Query  121  IAAITRQPVEWVVAPGT  137
            IAA+T QP +W+V  GT
Sbjct  529  IAAVTGQPCQWIVPAGT  545


>gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycobacterium tuberculosis H37Rv]
 gi|15839609|ref|NP_334646.1| hypothetical protein MT0239 [Mycobacterium tuberculosis CDC1551]
 gi|31791406|ref|NP_853899.1| hypothetical protein Mb0234c [Mycobacterium bovis AF2122/97]
 42 more sequence titles
 Length=226

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G SAR+  + + L    
Sbjct  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA  148

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  149  LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  207

Query  121  IAAITRQPVEWVVAPGT  137
            IAA+T QP +W+V  GT
Sbjct  208  IAAVTGQPCQWIVPAGT  224


>gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosis CPHL_A]
 gi|289418719|gb|EFD15920.1| toxin [Mycobacterium tuberculosis CPHL_A]
Length=226

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 61/137 (45%), Positives = 79/137 (58%), Gaps = 2/137 (1%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M  +YLLD S   R   PAVR  +EPL E G +AR  ITDLE G  AR+  + + L    
Sbjct  90   MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYPARNETEWQRL-MVA  148

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
              A + + +  +   RA  IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ 
Sbjct  149  LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL  207

Query  121  IAAITRQPVEWVVAPGT  137
            IAA+T QP +W+V  GT
Sbjct  208  IAAVTGQPCQWIVPAGT  224


>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC 
12478]
Length=140

 Score = 89.4 bits (220),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 73/133 (55%), Gaps = 0/133 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            +  R+L+D SAA R   P V  RL PL+E GL+A     D E   SAR+  D+  L + R
Sbjct  3    LIARHLIDTSAAARMTHPEVAARLAPLIEAGLVATTAQLDAEALYSARNPADYEQLWSDR  62

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            R A EY+ T D  W  A   Q  L   G HR+V + DL+IA +A  H + ++HYD DFE 
Sbjct  63   RAAYEYLPTNDEHWQTALGAQRKLASTGRHRAVGMADLLIATLAAAHDMTLIHYDADFEI  122

Query  121  IAAITRQPVEWVV  133
             A +     +WV+
Sbjct  123  AAEVLPFRHQWVL  135


>gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
 gi|289689292|gb|EFD56721.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
Length=126

 Score = 89.4 bits (220),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 52/120 (44%), Positives = 69/120 (58%), Gaps = 2/120 (1%)

Query  18   PAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRA  77
            P     +EPL E G +AR  ITDLE G SAR+  + + L      A + + +  +   RA
Sbjct  7    PPCGGAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVALSAFDLIESTASHHRRA  65

Query  78   WEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPGT  137
              IQ  L  +   R  KIPDL+IAA  E HG+ V+HYD DF+ IAA+T QP +W+V  GT
Sbjct  66   LGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGT  124


>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
 gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140

 Score = 87.8 bits (216),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 72/135 (54%), Gaps = 1/135 (0%)

Query  5    YLLDKSAAYRAHLPA-VRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            YL+D SA  R      VR      +  G++  C +T+LE   SA+S  D         + 
Sbjct  6    YLIDTSAVVRVLTNEDVRKAWRDHLAEGVIGICEVTELEILFSAKSLADRLEKEALLGEL  65

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
              +   P++V+VRA  +Q  LT +G HRS    DL++AA AE  G+ ++HYD+DF+ IA 
Sbjct  66   FNWTPVPESVYVRARAVQRLLTGRGEHRSAGPVDLLVAATAELTGLTLLHYDKDFDAIAR  125

Query  124  ITRQPVEWVVAPGTA  138
             T QP  WV  PG A
Sbjct  126  ATGQPTRWVARPGEA  140


>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=140

 Score = 87.0 bits (214),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 49/138 (36%), Positives = 73/138 (53%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY  59
            M+  YL+D SA  R    PAV      +++ G +A C IT+LE   +   R++   L  Y
Sbjct  1    MSESYLIDTSACNRLFRSPAVERHWAGILDEGRVAVCEITELELVRATGGRDERAVLERY  60

Query  60   RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE  119
              DA  +   PD    RA ++Q+ L    +H+     DL+ AA AE  G+ ++HYD DFE
Sbjct  61   LHDAFGWTPVPDRALTRARQVQDLLVATSWHQGPGAVDLMTAATAELCGLTLLHYDADFE  120

Query  120  RIAAITRQPVEWVVAPGT  137
             IA +T QP +W+   G+
Sbjct  121  TIAKVTGQPHQWIAPRGS  138


>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 51/128 (40%), Positives = 70/128 (55%), Gaps = 1/128 (0%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            YL+D SA  R     V    E  +  GL++ C +T+LE   SARS  D   +   R    
Sbjct  6    YLIDTSALVRVLQRRVPREWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRD-RLSLF  64

Query  65   EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAI  124
             +   PD V+ RA  +Q  LTDKG HRS    DL++AA AE  G+ ++H+D+DFE +A  
Sbjct  65   TWCPMPDGVFRRARTVQALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVARA  124

Query  125  TRQPVEWV  132
            T QPV  +
Sbjct  125  TGQPVRMI  132


>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
 gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/109 (46%), Positives = 64/109 (59%), Gaps = 1/109 (0%)

Query  28   MERGLLARCGITDLEFGVSARSREDHRT-LGTYRRDALEYVNTPDTVWVRAWEIQEALTD  86
            ++ GL+    +T LE G SARS +D R  L      A+   NT   +  RA EIQE L  
Sbjct  51   IQHGLIRITTVTILEVGFSARSAQDLRVRLRRSLVSAMPVENTTPRIEARAVEIQELLAS  110

Query  87   KGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAP  135
             G HR+  +PDLIIAA AE  G+ V+H D+DFE IAA+T QP E +  P
Sbjct  111  TGHHRAPSVPDLIIAATAELAGLVVLHVDKDFELIAALTGQPTERLRLP  159


>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL 
11379]
 gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
 gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
Length=135

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 53/126 (43%), Positives = 70/126 (56%), Gaps = 3/126 (2%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            YL+D SA  R  L          +  GL+A C +T+LE   SARS ED   +    R AL
Sbjct  6    YLIDTSALARILLRQSTEDWTRRISAGLVALCDLTELELLYSARSTEDREKV--RERLAL  63

Query  65   -EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
              +   PD V+ RA  +Q+ LT KG HR+    DL++AA AE  G+ ++HYD+DFE IA 
Sbjct  64   YTWCPMPDGVFRRARTVQDQLTAKGEHRNAGPVDLLLAATAEQSGLTLLHYDRDFETIAR  123

Query  124  ITRQPV  129
             T QP 
Sbjct  124  TTGQPT  129


>gi|297163315|gb|ADI13027.1| PilT protein domain protein [Streptomyces bingchenggensis BCW-1]
Length=140

 Score = 81.6 bits (200),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 47/138 (35%), Positives = 71/138 (52%), Gaps = 1/138 (0%)

Query  1    MTTRYLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY  59
            M+  +L+D SA  R    PAV      +++ G +  C IT+LE   +   R +   L  Y
Sbjct  1    MSESFLIDTSACNRLFRTPAVERHWATVLDEGRVTVCEITELELVRATGGRGEWAVLERY  60

Query  60   RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE  119
              DA  +   PD    RA  +Q+ L    +H+  +  DL+ AA AE  G+ ++HYD DFE
Sbjct  61   LHDAFGWPPVPDRALTRARHVQDLLVATSWHQGPRAVDLMTAATAELCGLTLLHYDADFE  120

Query  120  RIAAITRQPVEWVVAPGT  137
             IA +T QP +W+   G+
Sbjct  121  TIAKVTGQPHQWIAPRGS  138


>gi|284034116|ref|YP_003384047.1| PilT protein domain-containing protein [Kribbella flavida DSM 
17836]
 gi|283813409|gb|ADB35248.1| PilT protein domain protein [Kribbella flavida DSM 17836]
Length=137

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 54/129 (42%), Positives = 73/129 (57%), Gaps = 1/129 (0%)

Query  3    TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHR-TLGTYRR  61
            T +L+DKSA  R        +    ++RGL+    +T LE G S RS E+HR TL     
Sbjct  4    TTWLIDKSALVRLGDGPQIDQWANRIDRGLVHITPVTLLEVGFSTRSAEEHRMTLQFPPL  63

Query  62   DALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERI  121
             ++  VN+   +  RA  +Q  L   G HR+  +PDL+IAA AE  G+ V+H D+DFE I
Sbjct  64   SSMPVVNSTPAIESRAVAVQALLAATGQHRAPSVPDLLIAATAELAGLTVLHLDEDFELI  123

Query  122  AAITRQPVE  130
            A IT QPVE
Sbjct  124  AGITGQPVE  132


>gi|296128792|ref|YP_003636042.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
 gi|296020607|gb|ADG73843.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
Length=137

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 53/130 (41%), Positives = 71/130 (55%), Gaps = 3/130 (2%)

Query  3    TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRD  62
            T +L+DKSA  R      R   +  +ERGLL    +T LE G SA S    R   +    
Sbjct  4    TTWLVDKSALVRLPYAVERDLWQARLERGLLRLAHVTRLEVGFSALSGRSAREAASAPPV  63

Query  63   ALEYVN--TPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            +L  V   TP  +  RA E+Q  L D+G HR+  IPDL++AA AE  G+ V+  D+ F+ 
Sbjct  64   SLMPVEHLTPG-IEARALEVQTLLADRGEHRAASIPDLLVAATAEKLGMTVLAVDKGFDL  122

Query  121  IAAITRQPVE  130
            IA +T QPVE
Sbjct  123  IAHVTGQPVE  132


>gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
 gi|292832546|gb|EFF90895.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
sp. e14]
Length=135

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 45/134 (34%), Positives = 67/134 (50%), Gaps = 0/134 (0%)

Query  1    MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            M   +L+D SA  R +      + + L+  GL+  C     EF  +   R  +    T  
Sbjct  1    MNETFLIDTSALIRFYRGQAGTQWDQLVCSGLVGLCEPVRQEFLRAVGGRPSYYEADTLL  60

Query  61   RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER  120
            R+   Y    D  W  A E+Q+AL D+G+H+     DL++A  A HH + V+H D DFE 
Sbjct  61   RETFPYCPMRDFAWEDAAELQQALADRGWHQCASPVDLLVAVTAGHHKMTVLHEDADFET  120

Query  121  IAAITRQPVEWVVA  134
            IA +T QPV  ++A
Sbjct  121  IARVTGQPVRRILA  134


>gi|269124363|ref|YP_003297733.1| PilT protein domain-containing protein [Thermomonospora curvata 
DSM 43183]
 gi|268309321|gb|ACY95695.1| PilT protein domain protein [Thermomonospora curvata DSM 43183]
Length=136

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 50/130 (39%), Positives = 79/130 (61%), Gaps = 1/130 (0%)

Query  5    YLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            +L D SA +R   +PA+    E  +  GL++ C +T++E   SARS  D+  +    R+ 
Sbjct  6    FLADTSAFHRLDGIPAIARNWEDQLRAGLVSVCPVTEIEIFYSARSSRDYERVSARLREV  65

Query  64   LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA  123
              +V  P+  + RA E+QEA+  +G HRS  + DL++AA AE + + V+H D+DF+ IAA
Sbjct  66   FGWVPVPERAFQRALEVQEAMLAQGTHRSAGLADLLLAATAEEYRLTVLHDDKDFDCIAA  125

Query  124  ITRQPVEWVV  133
            +T QPV  V+
Sbjct  126  VTGQPVRRVL  135


>gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
 gi|334687787|dbj|BAK37372.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 56/134 (42%), Positives = 75/134 (56%), Gaps = 9/134 (6%)

Query  3    TRYLLDKSAAYRAHLPAV--RHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR  60
            T +LLDKSA     L  V      +  ++RGL+    IT LE G SAR+  D R    +R
Sbjct  4    TSWLLDKSAFVGLQLDQVVDAEVWKTRIDRGLVRISPITRLELGYSARTGVDGRE--GFR  61

Query  61   RDALEYVN----TPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQ  116
            R  +  +     TP  +  RA E+Q  L D+G HR+  IPDL+IAA AE  G+ V+  D+
Sbjct  62   RPPVSLMPVERITP-AIEDRAEEVQMLLADRGQHRAPSIPDLLIAATAEKAGLTVLAVDK  120

Query  117  DFERIAAITRQPVE  130
            DF+ IA +T QPVE
Sbjct  121  DFDLIAEVTGQPVE  134


>gi|306780585|ref|ZP_07418922.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306785348|ref|ZP_07423670.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306789947|ref|ZP_07428269.1| toxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=137

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  61

Query  65   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  62   ARIPVGAKTFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121

Query  123  AITRQPVEWVVAPGT  137
            AIT QP EW+V  GT
Sbjct  122  AITGQPTEWIVPRGT  136


>gi|167968845|ref|ZP_02551122.1| hypothetical protein MtubH3_12760 [Mycobacterium tuberculosis 
H37Ra]
Length=136

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  2    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  60

Query  65   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  61   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  120

Query  123  AITRQPVEWVVAPGT  137
            AIT QP EW+V  GT
Sbjct  121  AITGQPTEWIVPRGT  135


>gi|15609683|ref|NP_217062.1| hypothetical protein Rv2546 [Mycobacterium tuberculosis H37Rv]
 gi|31793729|ref|NP_856222.1| hypothetical protein Mb2576 [Mycobacterium bovis AF2122/97]
 gi|121638431|ref|YP_978655.1| hypothetical protein BCG_2569 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 55 more sequence titles
 Length=137

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  61

Query  65   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121

Query  123  AITRQPVEWVVAPGT  137
            AIT QP EW+V  GT
Sbjct  122  AITGQPTEWIVPRGT  136


>gi|15842082|ref|NP_337119.1| hypothetical protein MT2622 [Mycobacterium tuberculosis CDC1551]
 gi|254551596|ref|ZP_05142043.1| hypothetical protein Mtube_14247 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289746329|ref|ZP_06505707.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 7 more sequence titles
 Length=138

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  4    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  62

Query  65   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  63   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  122

Query  123  AITRQPVEWVVAPGT  137
            AIT QP EW+V  GT
Sbjct  123  AITGQPTEWIVPRGT  137


>gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308369360|ref|ZP_07417480.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308372857|ref|ZP_07430154.2| toxin [Mycobacterium tuberculosis SUMu005]
 11 more sequence titles
 Length=143

 Score = 77.0 bits (188),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            R+L+DKSA  R             +ERGL+   G+T LE G SA   E  R    +R   
Sbjct  7    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP  64

Query  64   L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
            L     EY+ TP  +  RA E+Q  L D+G HR   IPDL+IAA AE  G+ V+H D+DF
Sbjct  65   LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF  122

Query  119  ERIAAITRQPVE  130
            + IAA+T Q  E
Sbjct  123  DAIAALTGQKTE  134


>gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
 gi|315264427|gb|ADU01169.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
Length=137

 Score = 77.0 bits (188),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 58/132 (44%), Positives = 75/132 (57%), Gaps = 11/132 (8%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMER---GLLARCGITDLEFGVSARSREDHRT---LGT  58
            +L+DKSA  R    AV   +E  MER   GL+    +T LE G S R+    R+      
Sbjct  6    WLIDKSAYTRL---AVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAAQARSEVASPP  62

Query  59   YRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
                 +EY+ TP TV  RA EIQ  L D+G HR+  IPDL++AA AE  G+ V+H  +DF
Sbjct  63   LTLMPIEYM-TP-TVEDRAREIQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDF  120

Query  119  ERIAAITRQPVE  130
            + IA IT QPVE
Sbjct  121  DLIAGITGQPVE  132


>gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
 gi|229598011|pdb|3H87|B Chain B, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
Length=156

 Score = 77.0 bits (188),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            R+L+DKSA  R             +ERGL+   G+T LE G SA   E  R    +R   
Sbjct  20   RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP  77

Query  64   L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
            L     EY+ TP  +  RA E+Q  L D+G HR   IPDL+IAA AE  G+ V+H D+DF
Sbjct  78   LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF  135

Query  119  ERIAAITRQPVE  130
            + IAA+T Q  E
Sbjct  136  DAIAALTGQKTE  147


>gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycobacterium tuberculosis H37Rv]
 gi|15839686|ref|NP_334723.1| hypothetical protein MT0314 [Mycobacterium tuberculosis CDC1551]
 gi|31791480|ref|NP_853973.1| hypothetical protein Mb0309 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 Length=141

 Score = 77.0 bits (188),  Expect = 9e-13, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            R+L+DKSA  R             +ERGL+   G+T LE G SA   E  R    +R   
Sbjct  5    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP  62

Query  64   L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
            L     EY+ TP  +  RA E+Q  L D+G HR   IPDL+IAA AE  G+ V+H D+DF
Sbjct  63   LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF  120

Query  119  ERIAAITRQPVE  130
            + IAA+T Q  E
Sbjct  121  DAIAALTGQKTE  132


>gi|145225766|ref|YP_001136444.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145218252|gb|ABP47656.1| PilT protein domain protein [Mycobacterium gilvum PYR-GCK]
Length=137

 Score = 77.0 bits (188),  Expect = 9e-13, Method: Compositional matrix adjust.
 Identities = 57/132 (44%), Positives = 75/132 (57%), Gaps = 11/132 (8%)

Query  5    YLLDKSAAYRAHLPAVRHRLEPLMER---GLLARCGITDLEFGVSARSREDHRT---LGT  58
            +L+DKSA  R    AV   +E  MER   GL+    +T LE G S R+ E  R+      
Sbjct  6    WLIDKSAYTRL---AVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAEQARSEVASPP  62

Query  59   YRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
                 +EY+ TP TV  RA E+Q  L D+G HR+  IPDL++AA AE  G+ V+H  +DF
Sbjct  63   LTLMPIEYM-TP-TVEDRAREVQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDF  120

Query  119  ERIAAITRQPVE  130
            + IA  T QPVE
Sbjct  121  DLIAGTTGQPVE  132


>gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 [Mycobacterium africanum GM041182]
 gi|339329732|emb|CCC25375.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=141

 Score = 74.7 bits (182),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 55/132 (42%), Positives = 71/132 (54%), Gaps = 9/132 (6%)

Query  4    RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA  63
            R+L+DKSA  R             +ERGL+   G+T LE G SA   E  R    +R   
Sbjct  5    RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP  62

Query  64   L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
            L     EY+ TP  +  RA E+Q  L D+G H    IPDL+IAA AE  G+ V+H D+DF
Sbjct  63   LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHHGPSIPDLLIAATAELSGLTVLHVDKDF  120

Query  119  ERIAAITRQPVE  130
            + IAA+T Q  E
Sbjct  121  DAIAALTGQKTE  132


>gi|339295424|gb|AEJ47535.1| hypothetical protein CCDC5079_2345 [Mycobacterium tuberculosis 
CCDC5079]
Length=112

 Score = 71.6 bits (174),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 46/108 (43%), Positives = 59/108 (55%), Gaps = 6/108 (5%)

Query  35   RCGITD---LEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDKG--F  89
            + GI D   LE   SA S  D+  L     D L  +      + RA ++Q  L       
Sbjct  5    QIGICDHVRLEILYSANSATDYDALAD-ELDGLARIPVGAETFTRACQVQRELAHVAGLH  63

Query  90   HRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPGT  137
            HRSVKI DL+IAA AE  G  V HYD++++R+AAIT QP EW+V  GT
Sbjct  64   HRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGT  111


>gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
 gi|334685626|dbj|BAK35211.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 71.6 bits (174),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 51/132 (39%), Positives = 71/132 (54%), Gaps = 5/132 (3%)

Query  2    TTRYLLDKSAAYRAHLPAVRHRLEPL--MERGLLARCGITDLEFGVSARSREDHRTLGTY  59
            T  +L+DKSA  R  LPA   +   L  ++RGL+    +T  E G S  S +D   L   
Sbjct  4    TRAWLIDKSALVR--LPASPDQATWLNRIQRGLVTVTPLTMAELGFSTMSADDWTRLQHG  61

Query  60   RRDAL-EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
               AL   +        RA E+Q  L  +G HR+V + DL IAAVAE  G+ ++H D+DF
Sbjct  62   PPLALMPLIGISPRAESRALEVQGLLAGRGRHRAVGVADLFIAAVAEDSGLTLLHVDKDF  121

Query  119  ERIAAITRQPVE  130
            + I+ +T QPVE
Sbjct  122  DLISEVTNQPVE  133


>gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197721228|gb|EDY65136.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
Length=140

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 44/123 (36%), Positives = 55/123 (45%), Gaps = 1/123 (0%)

Query  1    MTTRYLLDKSAAYRA-HLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY  59
            M  R+L+D SA +    +P  R    P +E GL+  C  T  EF  SA        L T 
Sbjct  1    MNHRFLIDTSALWELLRIPEARAAWAPFVESGLVLICEPTKAEFLHSATGPAHRDDLETR  60

Query  60   RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE  119
              D       P   W      Q  LT KG HRS    DL++ A A HHG+ V+H D DF 
Sbjct  61   LHDMFPAARVPGGAWSWVDTAQYKLTQKGQHRSAGPLDLLLCATAVHHGLVVLHRDNDFV  120

Query  120  RIA  122
             +A
Sbjct  121  SVA  123


>gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
 gi|315265298|gb|ADU02039.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium 
sp. Spyr1]
Length=134

 Score = 67.0 bits (162),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 52/132 (40%), Positives = 73/132 (56%), Gaps = 7/132 (5%)

Query  3    TRYLLDKSAAYR-AHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRR  61
            T +L+DKSA  +    P  +  +E + ERGL+    +T L+ G S R+    R+      
Sbjct  2    TNWLIDKSAYTQLVASPDAQAWVERI-ERGLVRMSTVTRLQIGYSFRNGSQARSESGAPP  60

Query  62   DAL---EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF  118
             AL   EY+ TP     RA  +Q  L D+G HR+  IPDL++AAVAE  G+ V+  D DF
Sbjct  61   LALMPLEYL-TP-AAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDF  118

Query  119  ERIAAITRQPVE  130
            + IA +T Q VE
Sbjct  119  DLIAQVTGQAVE  130



Lambda     K      H
   0.323    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127792337190


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40