BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2757c
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycob... 283 6e-75
gi|308378090|ref|ZP_07668665.1| putative type I restriction-modi... 281 3e-74
gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841... 280 4e-74
gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [... 124 3e-27
gi|345013748|ref|YP_004816102.1| PilT protein domain-containing ... 124 5e-27
gi|284991226|ref|YP_003409780.1| PilT protein domain-containing ... 123 1e-26
gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Stre... 122 2e-26
gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin syste... 121 3e-26
gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin syste... 120 5e-26
gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Stre... 120 7e-26
gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bac... 119 1e-25
gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681... 119 2e-25
gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [... 118 3e-25
gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Stre... 116 1e-24
gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin syste... 115 2e-24
gi|315504329|ref|YP_004083216.1| pilt protein domain-containing ... 115 2e-24
gi|302869194|ref|YP_003837831.1| PilT protein domain-containing ... 115 3e-24
gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [... 111 3e-23
gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kit... 110 9e-23
gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_1235... 107 7e-22
gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosi... 106 1e-21
gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycob... 105 2e-21
gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosi... 103 7e-21
gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_2644... 89.4 1e-16
gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved m... 89.4 2e-16
gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces ... 87.8 4e-16
gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin syste... 87.0 7e-16
gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [... 84.0 7e-15
gi|158318849|ref|YP_001511357.1| PilT domain-containing protein ... 83.2 1e-14
gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_1465... 82.4 2e-14
gi|297163315|gb|ADI13027.1| PilT protein domain protein [Strepto... 81.6 3e-14
gi|284034116|ref|YP_003384047.1| PilT protein domain-containing ... 79.7 1e-13
gi|296128792|ref|YP_003636042.1| PilT protein domain protein [Ce... 79.3 2e-13
gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin syste... 78.6 3e-13
gi|269124363|ref|YP_003297733.1| PilT protein domain-containing ... 78.6 3e-13
gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 ... 78.2 4e-13
gi|306780585|ref|ZP_07418922.1| toxin [Mycobacterium tuberculosi... 78.2 4e-13
gi|167968845|ref|ZP_02551122.1| hypothetical protein MtubH3_1276... 77.8 5e-13
gi|15609683|ref|NP_217062.1| hypothetical protein Rv2546 [Mycoba... 77.8 5e-13
gi|15842082|ref|NP_337119.1| hypothetical protein MT2622 [Mycoba... 77.8 5e-13
gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [... 77.0 7e-13
gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, c... 77.0 8e-13
gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin C... 77.0 8e-13
gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycoba... 77.0 9e-13
gi|145225766|ref|YP_001136444.1| PilT domain-containing protein ... 77.0 9e-13
gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 ... 74.7 5e-12
gi|339295424|gb|AEJ47535.1| hypothetical protein CCDC5079_2345 [... 71.6 3e-11
gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 ... 71.6 4e-11
gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [... 67.8 5e-10
gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, c... 67.0 8e-10
>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=138
Score = 283 bits (724), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
Query 121 IAAITRQPVEWVVAPGTA 138
IAAITRQPVEWVVAPGTA
Sbjct 121 IAAITRQPVEWVVAPGTA 138
>gi|308378090|ref|ZP_07668665.1| putative type I restriction-modification system, M subunit [Mycobacterium
tuberculosis SUMu009]
gi|308353571|gb|EFP42422.1| putative type I restriction-modification system, M subunit [Mycobacterium
tuberculosis SUMu009]
Length=718
Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct 11 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 70
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct 71 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 130
Query 121 IAAITRQPVEWVVAP 135
IAAITRQPVEWVVAP
Sbjct 131 IAAITRQPVEWVVAP 145
>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT
140010059]
gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138
Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR
Sbjct 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
RDALEYVNTPDTVW RAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER
Sbjct 61 RDALEYVNTPDTVWDRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
Query 121 IAAITRQPVEWVVAPGTA 138
IAAITRQPVEWVVAPGTA
Sbjct 121 IAAITRQPVEWVVAPGTA 138
>gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194342731|gb|EDX23697.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=138
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 89/138 (65%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M+ R+L+DKSA R PAV ++PL GLLA CG +LE SARS+ D R +
Sbjct 1 MSERFLIDKSALARYPKPAVHAVIDPLHNAGLLAVCGAVELEVMYSARSKADARRV-REG 59
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A +++ TPD W RA E+Q+AL +G ++V +PDLIIAA AE HG V+HYD D++
Sbjct 60 MAAFDWLPTPDEAWDRALEVQDALIGEGNWKAVSLPDLIIAATAERHGATVLHYDGDYDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IAA+T QP+ WVV G A
Sbjct 120 IAAVTGQPMRWVVPRGAA 137
>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger
Tu 4113]
gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/138 (47%), Positives = 87/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M+ R+L+D SA R P V L+PL E G+LA CG ++E SAR+ D + L +
Sbjct 1 MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEMEVMYSARNDNDAKRLHWFL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
+Y+ PD VW RA +IQ KG HR++ +PDL+IAA AE H + V+HYDQD++
Sbjct 61 S-GFDYLPMPDEVWDRAKDIQRQAITKGNHRALSMPDLLIAAAAERHAVTVLHYDQDYDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IAAIT QP++WV GTA
Sbjct 120 IAAITGQPMKWVTEAGTA 137
>gi|284991226|ref|YP_003409780.1| PilT protein domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284064471|gb|ADB75409.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=141
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/137 (49%), Positives = 85/137 (63%), Gaps = 0/137 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
+ RYLLD SAA R P V R+ PL+ GLLA C DLE SARS ++R + R
Sbjct 3 VVARYLLDTSAAARVPAPQVADRVVPLLSAGLLATCAALDLEALYSARSPREYREVRADR 62
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
R A EY+ T D W RA ++Q AL D G R V + DL+I+AVAE H + V+HYD DF+
Sbjct 63 RLAYEYLPTEDGDWQRALQVQAALADAGRWRGVGLADLVISAVAERHRVTVLHYDGDFDG 122
Query 121 IAAITRQPVEWVVAPGT 137
+AA+T Q EWVV G+
Sbjct 123 VAAVTGQRTEWVVPAGS 139
>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/136 (50%), Positives = 86/136 (64%), Gaps = 3/136 (2%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDH-RTLGTYRRD 62
RYL+D S RA P VR LEP + RGL+ GI DLE SAR+ +D+ R LG RR
Sbjct 5 RYLVDMSVWARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYERMLG--RRQ 62
Query 63 ALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
A E+ T D + RA E+Q KG HR++ IPDL++AA AE HG+ ++HYD DF+ IA
Sbjct 63 AFEWFPTTDEIVARAIEVQGFCARKGNHRALSIPDLLVAATAERHGLTLLHYDGDFDLIA 122
Query 123 AITRQPVEWVVAPGTA 138
+T Q EW+V GTA
Sbjct 123 EVTGQLTEWIVPRGTA 138
>gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302476943|gb|EFL40036.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=139
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 88/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M YL+DKSA R P+V+ L+PL ER LLA C T+ E SAR + + T+
Sbjct 1 MQDHYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEYEMIHSARDSSEATRISTWL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A +Y+ T D V+ RA EIQ + GFHR++ +PDL+IAA AE H V+HYD DF+
Sbjct 61 H-AFDYLRTDDDVFTRALEIQRHALNAGFHRALSLPDLLIAATAELHRRTVLHYDGDFDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IA++T QP EWVVAPG+A
Sbjct 120 IASLTGQPAEWVVAPGSA 137
>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=138
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/138 (48%), Positives = 84/138 (61%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M+ RYL+DKSA R+ PAVR L PL ERGLL G ++E SAR+ + LG +
Sbjct 1 MSHRYLIDKSALARSARPAVRETLNPLHERGLLCVTGAVEVEILYSARNANEADRLGRWL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
+Y+ PD VW A +IQ KG HR+ + DL+IAA A+ HG V+HYD D+++
Sbjct 61 T-GFDYLPCPDEVWDAALDIQRQAIAKGNHRAFSMADLLIAATAQRHGATVLHYDGDYDQ 119
Query 121 IAAITRQPVEWVVAPGTA 138
IAAIT P WV PGTA
Sbjct 120 IAAITGYPSRWVAEPGTA 137
>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis
BCW-1]
Length=139
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 87/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M+ R+L+D SA R P V L+PL E G+LA CG ++E SAR+ D + L +
Sbjct 1 MSERFLIDNSALQRWRKPKVAEVLDPLHEDGVLAVCGPVEIEVMYSARNENDAKRLHWFL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
+Y+ D VW RA ++Q KG HR++ +PDL+IAA AE H + V+HYDQD++
Sbjct 61 A-GFDYLPMTDEVWDRAKDVQRQAIAKGNHRALSMPDLLIAAAAERHVVTVLHYDQDYDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IAAIT QP++WVV GTA
Sbjct 120 IAAITGQPMKWVVEAGTA 137
>gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bacterium]
Length=139
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/138 (48%), Positives = 88/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M RYL+DKSA R P+V+ L+PL ER LLA C T+ E SAR + + T+
Sbjct 1 MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDGSEATRISTWL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A +Y+ T D ++RA EIQ + GFHR++ +PDL+IAA AE + V+HYD DF+
Sbjct 61 H-AFDYLRTDDDTFIRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IA++T QP EWVV PG+A
Sbjct 120 IASLTGQPTEWVVPPGSA 137
>gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681 [Streptomyces scabiei 87.22]
gi|260648035|emb|CBG71143.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/138 (48%), Positives = 87/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M RYL+DKSA R P+V+ L+PL ER LLA C T+ E SAR + + T+
Sbjct 1 MQDRYLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDSSEATRISTWL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A +Y+ T D + RA EIQ + GFHR++ +PDL+IAA AE + V+HYD DF+
Sbjct 61 H-AFDYLRTDDDTFTRALEIQRHALNAGFHRALSLPDLLIAATAELNRRTVLHYDGDFDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IA++T QP EWVV PG+A
Sbjct 120 IASLTGQPTEWVVPPGSA 137
>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/138 (47%), Positives = 87/138 (64%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
MT R+L+DKSA R PAVR ++PL G+L CG +LE SARS+ D +
Sbjct 1 MTGRFLIDKSALARYPKPAVRAVIDPLHVAGVLGVCGAVELEVLYSARSKGDADRV-RAG 59
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A +++TPD VW RA ++Q+ L G ++V +PDL+IAA AE HG V+HYD D++
Sbjct 60 LGAFAWLSTPDEVWDRALDVQKQLIVAGNWKAVSLPDLVIAATAERHGATVLHYDGDYDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IA +T QP+ WVV GTA
Sbjct 120 IAEVTGQPMRWVVPRGTA 137
>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis
BCW-1]
Length=138
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/138 (47%), Positives = 83/138 (61%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
MT RYL+DKSA R PA R +EPL GLLA CG +LE SARS+ D +
Sbjct 1 MTDRYLIDKSALARYPKPAARAVIEPLHNAGLLAVCGAVELEVLHSARSKGDAERIRDEM 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
R +++ TPD W RA E+Q L G +++ + DL+IAA AE H + V+HYD D++
Sbjct 61 R-GFDWLPTPDEAWDRALEVQTQLIAAGNWKALSVSDLVIAATAERHSVIVLHYDGDYDM 119
Query 121 IAAITRQPVEWVVAPGTA 138
IAA+T Q WVV GTA
Sbjct 120 IAAVTGQSTRWVVPSGTA 137
>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
griseoflavus Tu4000]
Length=136
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/135 (47%), Positives = 85/135 (63%), Gaps = 1/135 (0%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
RYL+DKSA R PAVR L+PL++RGLLA G ++E SAR+ + L Y
Sbjct 2 RYLIDKSALARRAKPAVRGVLDPLIQRGLLAVTGAVEMEILYSARNPAEAGKL-RYWLAG 60
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+Y+ PD W RA ++Q T G HR++ + DL+IAA AE HG+ V+HYD+D+E+IA
Sbjct 61 FDYLPCPDECWDRAKDVQAQATRTGNHRALSMADLLIAATAERHGVRVLHYDEDYEQIAE 120
Query 124 ITRQPVEWVVAPGTA 138
+T Q EWV GTA
Sbjct 121 LTGQAHEWVAPAGTA 135
>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/135 (49%), Positives = 83/135 (62%), Gaps = 1/135 (0%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
RYLLDKSA R PAV L+ L +RGLLA CG ++E SARS +D + R
Sbjct 5 RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVVHSARSAKDAKRARWLLR-G 63
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+++ PD +W RA +IQ KG HR++ + DL+IAA AE HG+ V+HYD DF+ I A
Sbjct 64 FDWLAMPDDIWDRAIDIQVQALHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITA 123
Query 124 ITRQPVEWVVAPGTA 138
IT QP WVV G A
Sbjct 124 ITGQPTTWVVPAGKA 138
>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/135 (49%), Positives = 83/135 (62%), Gaps = 1/135 (0%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
RYLLDKSA R PAV L+ L +RGLLA CG ++E SARS +D + R
Sbjct 5 RYLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVIHSARSAKDAKRARWLLR-G 63
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+++ PD +W RA +IQ KG HR++ + DL+IAA AE HG+ V+HYD DF+ I A
Sbjct 64 FDWLAMPDDIWDRAIDIQVQTLHKGNHRALSMADLLIAATAERHGVTVLHYDGDFDLITA 123
Query 124 ITRQPVEWVVAPGTA 138
IT QP WVV G A
Sbjct 124 ITGQPTTWVVPAGKA 138
>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/135 (43%), Positives = 80/135 (60%), Gaps = 0/135 (0%)
Query 3 TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRD 62
T YL+D SA R R R E +E GL++RC +T++EF SAR+ ED L
Sbjct 4 TAYLIDTSALVRILKHPARPRWEKPLEEGLISRCPMTEVEFLYSARNAEDRSELVQDLDA 63
Query 63 ALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
+ D RAW++Q LT+KG HRS DL++AA AE G+ ++HYD DFE IA
Sbjct 64 LFGWTPLDDRAVSRAWDVQRELTEKGQHRSAGAVDLLVAATAELQGLTMLHYDNDFETIA 123
Query 123 AITRQPVEWVVAPGT 137
++T QP +W+ APG+
Sbjct 124 SVTGQPTQWLAAPGS 138
>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/135 (46%), Positives = 84/135 (63%), Gaps = 1/135 (0%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
R+L+DKSA R PAVR L+ L +R LLA ++E SAR+ + L R
Sbjct 5 RFLIDKSALARWGKPAVRPVLDDLSQRALLAISPTVEMEVLYSARTLAEAERLRHLLR-G 63
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+Y++ PD VW RA ++Q+ +G HR++ + DL+IAA AE HG+ V+HYD D++ IAA
Sbjct 64 FDYLSCPDEVWDRAKQVQQQALFRGNHRALSMADLLIAATAERHGVTVLHYDGDYDMIAA 123
Query 124 ITRQPVEWVVAPGTA 138
IT QP WVV GTA
Sbjct 124 ITGQPARWVVPAGTA 138
>gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_12355 [Mycobacterium tuberculosis
H37Ra]
gi|253797151|ref|YP_003030152.1| toxin [Mycobacterium tuberculosis KZN 1435]
gi|308231499|ref|ZP_07412656.2| toxin [Mycobacterium tuberculosis SUMu001]
27 more sequence titles
Length=137
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M +YLLD S R PAVR +EPL E G +AR ITDLE G SAR+ + + L
Sbjct 1 MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA 59
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A + + + + RA IQ L + R KIPDL+IAA E HG+ V+HYD DF+
Sbjct 60 LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL 118
Query 121 IAAITRQPVEWVVAPGT 137
IAA+T QP +W+V GT
Sbjct 119 IAAVTGQPCQWIVPAGT 135
>gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosis K85]
gi|289537239|gb|EFD41817.1| toxin [Mycobacterium tuberculosis K85]
Length=547
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M +YLLD S R PAVR +EPL E G +AR ITDLE G SAR+ + + L
Sbjct 411 MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA 469
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A + + + + RA IQ L + R KIPDL+IAA E HG+ V+HYD DF+
Sbjct 470 LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL 528
Query 121 IAAITRQPVEWVVAPGT 137
IAA+T QP +W+V GT
Sbjct 529 IAAVTGQPCQWIVPAGT 545
>gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycobacterium tuberculosis H37Rv]
gi|15839609|ref|NP_334646.1| hypothetical protein MT0239 [Mycobacterium tuberculosis CDC1551]
gi|31791406|ref|NP_853899.1| hypothetical protein Mb0234c [Mycobacterium bovis AF2122/97]
42 more sequence titles
Length=226
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/137 (46%), Positives = 80/137 (59%), Gaps = 2/137 (1%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M +YLLD S R PAVR +EPL E G +AR ITDLE G SAR+ + + L
Sbjct 90 MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVA 148
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A + + + + RA IQ L + R KIPDL+IAA E HG+ V+HYD DF+
Sbjct 149 LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL 207
Query 121 IAAITRQPVEWVVAPGT 137
IAA+T QP +W+V GT
Sbjct 208 IAAVTGQPCQWIVPAGT 224
>gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosis CPHL_A]
gi|289418719|gb|EFD15920.1| toxin [Mycobacterium tuberculosis CPHL_A]
Length=226
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/137 (45%), Positives = 79/137 (58%), Gaps = 2/137 (1%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M +YLLD S R PAVR +EPL E G +AR ITDLE G AR+ + + L
Sbjct 90 MALKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYPARNETEWQRL-MVA 148
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
A + + + + RA IQ L + R KIPDL+IAA E HG+ V+HYD DF+
Sbjct 149 LSAFDLIESTASHHRRALGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDL 207
Query 121 IAAITRQPVEWVVAPGT 137
IAA+T QP +W+V GT
Sbjct 208 IAAVTGQPCQWIVPAGT 224
>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC
12478]
Length=140
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/133 (41%), Positives = 73/133 (55%), Gaps = 0/133 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
+ R+L+D SAA R P V RL PL+E GL+A D E SAR+ D+ L + R
Sbjct 3 LIARHLIDTSAAARMTHPEVAARLAPLIEAGLVATTAQLDAEALYSARNPADYEQLWSDR 62
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
R A EY+ T D W A Q L G HR+V + DL+IA +A H + ++HYD DFE
Sbjct 63 RAAYEYLPTNDEHWQTALGAQRKLASTGRHRAVGMADLLIATLAAAHDMTLIHYDADFEI 122
Query 121 IAAITRQPVEWVV 133
A + +WV+
Sbjct 123 AAEVLPFRHQWVL 135
>gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis T92]
gi|289689292|gb|EFD56721.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium
tuberculosis T92]
Length=126
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/120 (44%), Positives = 69/120 (58%), Gaps = 2/120 (1%)
Query 18 PAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRA 77
P +EPL E G +AR ITDLE G SAR+ + + L A + + + + RA
Sbjct 7 PPCGGAVEPLAEAGAVARTQITDLEVGYSARNETEWQRL-MVALSAFDLIESTASHHRRA 65
Query 78 WEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPGT 137
IQ L + R KIPDL+IAA E HG+ V+HYD DF+ IAA+T QP +W+V GT
Sbjct 66 LGIQRLLAARS-QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGT 124
>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 72/135 (54%), Gaps = 1/135 (0%)
Query 5 YLLDKSAAYRAHLPA-VRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
YL+D SA R VR + G++ C +T+LE SA+S D +
Sbjct 6 YLIDTSAVVRVLTNEDVRKAWRDHLAEGVIGICEVTELEILFSAKSLADRLEKEALLGEL 65
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+ P++V+VRA +Q LT +G HRS DL++AA AE G+ ++HYD+DF+ IA
Sbjct 66 FNWTPVPESVYVRARAVQRLLTGRGEHRSAGPVDLLVAATAELTGLTLLHYDKDFDAIAR 125
Query 124 ITRQPVEWVVAPGTA 138
T QP WV PG A
Sbjct 126 ATGQPTRWVARPGEA 140
>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
hygroscopicus ATCC 53653]
gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
himastatinicus ATCC 53653]
Length=140
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/138 (36%), Positives = 73/138 (53%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY 59
M+ YL+D SA R PAV +++ G +A C IT+LE + R++ L Y
Sbjct 1 MSESYLIDTSACNRLFRSPAVERHWAGILDEGRVAVCEITELELVRATGGRDERAVLERY 60
Query 60 RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE 119
DA + PD RA ++Q+ L +H+ DL+ AA AE G+ ++HYD DFE
Sbjct 61 LHDAFGWTPVPDRALTRARQVQDLLVATSWHQGPGAVDLMTAATAELCGLTLLHYDADFE 120
Query 120 RIAAITRQPVEWVVAPGT 137
IA +T QP +W+ G+
Sbjct 121 TIAKVTGQPHQWIAPRGS 138
>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/128 (40%), Positives = 70/128 (55%), Gaps = 1/128 (0%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
YL+D SA R V E + GL++ C +T+LE SARS D + R
Sbjct 6 YLIDTSALVRVLQRRVPREWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRD-RLSLF 64
Query 65 EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAI 124
+ PD V+ RA +Q LTDKG HRS DL++AA AE G+ ++H+D+DFE +A
Sbjct 65 TWCPMPDGVFRRARTVQALLTDKGEHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVARA 124
Query 125 TRQPVEWV 132
T QPV +
Sbjct 125 TGQPVRMI 132
>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/109 (46%), Positives = 64/109 (59%), Gaps = 1/109 (0%)
Query 28 MERGLLARCGITDLEFGVSARSREDHRT-LGTYRRDALEYVNTPDTVWVRAWEIQEALTD 86
++ GL+ +T LE G SARS +D R L A+ NT + RA EIQE L
Sbjct 51 IQHGLIRITTVTILEVGFSARSAQDLRVRLRRSLVSAMPVENTTPRIEARAVEIQELLAS 110
Query 87 KGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAP 135
G HR+ +PDLIIAA AE G+ V+H D+DFE IAA+T QP E + P
Sbjct 111 TGHHRAPSVPDLIIAATAELAGLVVLHVDKDFELIAALTGQPTERLRLP 159
>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL
11379]
gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus
NRRL 15998]
Length=135
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/126 (43%), Positives = 70/126 (56%), Gaps = 3/126 (2%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
YL+D SA R L + GL+A C +T+LE SARS ED + R AL
Sbjct 6 YLIDTSALARILLRQSTEDWTRRISAGLVALCDLTELELLYSARSTEDREKV--RERLAL 63
Query 65 -EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+ PD V+ RA +Q+ LT KG HR+ DL++AA AE G+ ++HYD+DFE IA
Sbjct 64 YTWCPMPDGVFRRARTVQDQLTAKGEHRNAGPVDLLLAATAEQSGLTLLHYDRDFETIAR 123
Query 124 ITRQPV 129
T QP
Sbjct 124 TTGQPT 129
>gi|297163315|gb|ADI13027.1| PilT protein domain protein [Streptomyces bingchenggensis BCW-1]
Length=140
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/138 (35%), Positives = 71/138 (52%), Gaps = 1/138 (0%)
Query 1 MTTRYLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY 59
M+ +L+D SA R PAV +++ G + C IT+LE + R + L Y
Sbjct 1 MSESFLIDTSACNRLFRTPAVERHWATVLDEGRVTVCEITELELVRATGGRGEWAVLERY 60
Query 60 RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE 119
DA + PD RA +Q+ L +H+ + DL+ AA AE G+ ++HYD DFE
Sbjct 61 LHDAFGWPPVPDRALTRARHVQDLLVATSWHQGPRAVDLMTAATAELCGLTLLHYDADFE 120
Query 120 RIAAITRQPVEWVVAPGT 137
IA +T QP +W+ G+
Sbjct 121 TIAKVTGQPHQWIAPRGS 138
>gi|284034116|ref|YP_003384047.1| PilT protein domain-containing protein [Kribbella flavida DSM
17836]
gi|283813409|gb|ADB35248.1| PilT protein domain protein [Kribbella flavida DSM 17836]
Length=137
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/129 (42%), Positives = 73/129 (57%), Gaps = 1/129 (0%)
Query 3 TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHR-TLGTYRR 61
T +L+DKSA R + ++RGL+ +T LE G S RS E+HR TL
Sbjct 4 TTWLIDKSALVRLGDGPQIDQWANRIDRGLVHITPVTLLEVGFSTRSAEEHRMTLQFPPL 63
Query 62 DALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERI 121
++ VN+ + RA +Q L G HR+ +PDL+IAA AE G+ V+H D+DFE I
Sbjct 64 SSMPVVNSTPAIESRAVAVQALLAATGQHRAPSVPDLLIAATAELAGLTVLHLDEDFELI 123
Query 122 AAITRQPVE 130
A IT QPVE
Sbjct 124 AGITGQPVE 132
>gi|296128792|ref|YP_003636042.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
gi|296020607|gb|ADG73843.1| PilT protein domain protein [Cellulomonas flavigena DSM 20109]
Length=137
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/130 (41%), Positives = 71/130 (55%), Gaps = 3/130 (2%)
Query 3 TRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRD 62
T +L+DKSA R R + +ERGLL +T LE G SA S R +
Sbjct 4 TTWLVDKSALVRLPYAVERDLWQARLERGLLRLAHVTRLEVGFSALSGRSAREAASAPPV 63
Query 63 ALEYVN--TPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
+L V TP + RA E+Q L D+G HR+ IPDL++AA AE G+ V+ D+ F+
Sbjct 64 SLMPVEHLTPG-IEARALEVQTLLADRGEHRAASIPDLLVAATAEKLGMTVLAVDKGFDL 122
Query 121 IAAITRQPVE 130
IA +T QPVE
Sbjct 123 IAHVTGQPVE 132
>gi|294629213|ref|ZP_06707773.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
gi|292832546|gb|EFF90895.1| PIN family toxin-antitoxin system, toxin component [Streptomyces
sp. e14]
Length=135
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/134 (34%), Positives = 67/134 (50%), Gaps = 0/134 (0%)
Query 1 MTTRYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
M +L+D SA R + + + L+ GL+ C EF + R + T
Sbjct 1 MNETFLIDTSALIRFYRGQAGTQWDQLVCSGLVGLCEPVRQEFLRAVGGRPSYYEADTLL 60
Query 61 RDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFER 120
R+ Y D W A E+Q+AL D+G+H+ DL++A A HH + V+H D DFE
Sbjct 61 RETFPYCPMRDFAWEDAAELQQALADRGWHQCASPVDLLVAVTAGHHKMTVLHEDADFET 120
Query 121 IAAITRQPVEWVVA 134
IA +T QPV ++A
Sbjct 121 IARVTGQPVRRILA 134
>gi|269124363|ref|YP_003297733.1| PilT protein domain-containing protein [Thermomonospora curvata
DSM 43183]
gi|268309321|gb|ACY95695.1| PilT protein domain protein [Thermomonospora curvata DSM 43183]
Length=136
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/130 (39%), Positives = 79/130 (61%), Gaps = 1/130 (0%)
Query 5 YLLDKSAAYRAH-LPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
+L D SA +R +PA+ E + GL++ C +T++E SARS D+ + R+
Sbjct 6 FLADTSAFHRLDGIPAIARNWEDQLRAGLVSVCPVTEIEIFYSARSSRDYERVSARLREV 65
Query 64 LEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAA 123
+V P+ + RA E+QEA+ +G HRS + DL++AA AE + + V+H D+DF+ IAA
Sbjct 66 FGWVPVPERAFQRALEVQEAMLAQGTHRSAGLADLLLAATAEEYRLTVLHDDKDFDCIAA 125
Query 124 ITRQPVEWVV 133
+T QPV V+
Sbjct 126 VTGQPVRRVL 135
>gi|336119997|ref|YP_004574775.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
gi|334687787|dbj|BAK37372.1| hypothetical protein MLP_43580 [Microlunatus phosphovorus NM-1]
Length=139
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/134 (42%), Positives = 75/134 (56%), Gaps = 9/134 (6%)
Query 3 TRYLLDKSAAYRAHLPAV--RHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYR 60
T +LLDKSA L V + ++RGL+ IT LE G SAR+ D R +R
Sbjct 4 TSWLLDKSAFVGLQLDQVVDAEVWKTRIDRGLVRISPITRLELGYSARTGVDGRE--GFR 61
Query 61 RDALEYVN----TPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQ 116
R + + TP + RA E+Q L D+G HR+ IPDL+IAA AE G+ V+ D+
Sbjct 62 RPPVSLMPVERITP-AIEDRAEEVQMLLADRGQHRAPSIPDLLIAATAEKAGLTVLAVDK 120
Query 117 DFERIAAITRQPVE 130
DF+ IA +T QPVE
Sbjct 121 DFDLIAEVTGQPVE 134
>gi|306780585|ref|ZP_07418922.1| toxin [Mycobacterium tuberculosis SUMu002]
gi|306785348|ref|ZP_07423670.1| toxin [Mycobacterium tuberculosis SUMu003]
gi|306789947|ref|ZP_07428269.1| toxin [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=137
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
+ +D SA + A P V R + + C LE SA S D+ L D L
Sbjct 3 FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL 61
Query 65 EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
+ + RA ++Q L HRSVKI DL+IAA AE G V HYD++++R+A
Sbjct 62 ARIPVGAKTFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA 121
Query 123 AITRQPVEWVVAPGT 137
AIT QP EW+V GT
Sbjct 122 AITGQPTEWIVPRGT 136
>gi|167968845|ref|ZP_02551122.1| hypothetical protein MtubH3_12760 [Mycobacterium tuberculosis
H37Ra]
Length=136
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
+ +D SA + A P V R + + C LE SA S D+ L D L
Sbjct 2 FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL 60
Query 65 EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
+ + RA ++Q L HRSVKI DL+IAA AE G V HYD++++R+A
Sbjct 61 ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA 120
Query 123 AITRQPVEWVVAPGT 137
AIT QP EW+V GT
Sbjct 121 AITGQPTEWIVPRGT 135
>gi|15609683|ref|NP_217062.1| hypothetical protein Rv2546 [Mycobacterium tuberculosis H37Rv]
gi|31793729|ref|NP_856222.1| hypothetical protein Mb2576 [Mycobacterium bovis AF2122/97]
gi|121638431|ref|YP_978655.1| hypothetical protein BCG_2569 [Mycobacterium bovis BCG str. Pasteur
1173P2]
55 more sequence titles
Length=137
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
+ +D SA + A P V R + + C LE SA S D+ L D L
Sbjct 3 FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL 61
Query 65 EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
+ + RA ++Q L HRSVKI DL+IAA AE G V HYD++++R+A
Sbjct 62 ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA 121
Query 123 AITRQPVEWVVAPGT 137
AIT QP EW+V GT
Sbjct 122 AITGQPTEWIVPRGT 136
>gi|15842082|ref|NP_337119.1| hypothetical protein MT2622 [Mycobacterium tuberculosis CDC1551]
gi|254551596|ref|ZP_05142043.1| hypothetical protein Mtube_14247 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289746329|ref|ZP_06505707.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
7 more sequence titles
Length=138
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL 64
+ +D SA + A P V R + + C LE SA S D+ L D L
Sbjct 4 FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL 62
Query 65 EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA 122
+ + RA ++Q L HRSVKI DL+IAA AE G V HYD++++R+A
Sbjct 63 ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA 122
Query 123 AITRQPVEWVVAPGT 137
AIT QP EW+V GT
Sbjct 123 AITGQPTEWIVPRGT 137
>gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|308369360|ref|ZP_07417480.2| toxin [Mycobacterium tuberculosis SUMu002]
gi|308372857|ref|ZP_07430154.2| toxin [Mycobacterium tuberculosis SUMu005]
11 more sequence titles
Length=143
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 7 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 64
Query 64 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
L EY+ TP + RA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 65 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 122
Query 119 ERIAAITRQPVE 130
+ IAA+T Q E
Sbjct 123 DAIAALTGQKTE 134
>gi|315446124|ref|YP_004079003.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
gi|315264427|gb|ADU01169.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
Length=137
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/132 (44%), Positives = 75/132 (57%), Gaps = 11/132 (8%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMER---GLLARCGITDLEFGVSARSREDHRT---LGT 58
+L+DKSA R AV +E MER GL+ +T LE G S R+ R+
Sbjct 6 WLIDKSAYTRL---AVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAAQARSEVASPP 62
Query 59 YRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
+EY+ TP TV RA EIQ L D+G HR+ IPDL++AA AE G+ V+H +DF
Sbjct 63 LTLMPIEYM-TP-TVEDRAREIQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDF 120
Query 119 ERIAAITRQPVE 130
+ IA IT QPVE
Sbjct 121 DLIAGITGQPVE 132
>gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium
Tuberculosis
gi|229598011|pdb|3H87|B Chain B, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium
Tuberculosis
Length=156
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 20 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 77
Query 64 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
L EY+ TP + RA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 78 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 135
Query 119 ERIAAITRQPVE 130
+ IAA+T Q E
Sbjct 136 DAIAALTGQKTE 147
>gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycobacterium tuberculosis H37Rv]
gi|15839686|ref|NP_334723.1| hypothetical protein MT0314 [Mycobacterium tuberculosis CDC1551]
gi|31791480|ref|NP_853973.1| hypothetical protein Mb0309 [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=141
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/132 (43%), Positives = 72/132 (55%), Gaps = 9/132 (6%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 62
Query 64 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
L EY+ TP + RA E+Q L D+G HR IPDL+IAA AE G+ V+H D+DF
Sbjct 63 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDF 120
Query 119 ERIAAITRQPVE 130
+ IAA+T Q E
Sbjct 121 DAIAALTGQKTE 132
>gi|145225766|ref|YP_001136444.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|145218252|gb|ABP47656.1| PilT protein domain protein [Mycobacterium gilvum PYR-GCK]
Length=137
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/132 (44%), Positives = 75/132 (57%), Gaps = 11/132 (8%)
Query 5 YLLDKSAAYRAHLPAVRHRLEPLMER---GLLARCGITDLEFGVSARSREDHRT---LGT 58
+L+DKSA R AV +E MER GL+ +T LE G S R+ E R+
Sbjct 6 WLIDKSAYTRL---AVSPDVELWMERIDRGLVRISTVTRLEIGYSFRTAEQARSEVASPP 62
Query 59 YRRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
+EY+ TP TV RA E+Q L D+G HR+ IPDL++AA AE G+ V+H +DF
Sbjct 63 LTLMPIEYM-TP-TVEDRAREVQLTLADRGMHRAPSIPDLLVAATAEQAGLTVLHLHKDF 120
Query 119 ERIAAITRQPVE 130
+ IA T QPVE
Sbjct 121 DLIAGTTGQPVE 132
>gi|339630376|ref|YP_004722018.1| hypothetical protein MAF_03030 [Mycobacterium africanum GM041182]
gi|339329732|emb|CCC25375.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=141
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/132 (42%), Positives = 71/132 (54%), Gaps = 9/132 (6%)
Query 4 RYLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDA 63
R+L+DKSA R +ERGL+ G+T LE G SA E R +R
Sbjct 5 RWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEIARR--EFREPP 62
Query 64 L-----EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
L EY+ TP + RA E+Q L D+G H IPDL+IAA AE G+ V+H D+DF
Sbjct 63 LSAMPVEYL-TP-RIEDRALEVQTLLADRGHHHGPSIPDLLIAATAELSGLTVLHVDKDF 120
Query 119 ERIAAITRQPVE 130
+ IAA+T Q E
Sbjct 121 DAIAALTGQKTE 132
>gi|339295424|gb|AEJ47535.1| hypothetical protein CCDC5079_2345 [Mycobacterium tuberculosis
CCDC5079]
Length=112
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/108 (43%), Positives = 59/108 (55%), Gaps = 6/108 (5%)
Query 35 RCGITD---LEFGVSARSREDHRTLGTYRRDALEYVNTPDTVWVRAWEIQEALTDKG--F 89
+ GI D LE SA S D+ L D L + + RA ++Q L
Sbjct 5 QIGICDHVRLEILYSANSATDYDALAD-ELDGLARIPVGAETFTRACQVQRELAHVAGLH 63
Query 90 HRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVAPGT 137
HRSVKI DL+IAA AE G V HYD++++R+AAIT QP EW+V GT
Sbjct 64 HRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGT 111
>gi|336117846|ref|YP_004572614.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
gi|334685626|dbj|BAK35211.1| hypothetical protein MLP_21970 [Microlunatus phosphovorus NM-1]
Length=139
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/132 (39%), Positives = 71/132 (54%), Gaps = 5/132 (3%)
Query 2 TTRYLLDKSAAYRAHLPAVRHRLEPL--MERGLLARCGITDLEFGVSARSREDHRTLGTY 59
T +L+DKSA R LPA + L ++RGL+ +T E G S S +D L
Sbjct 4 TRAWLIDKSALVR--LPASPDQATWLNRIQRGLVTVTPLTMAELGFSTMSADDWTRLQHG 61
Query 60 RRDAL-EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
AL + RA E+Q L +G HR+V + DL IAAVAE G+ ++H D+DF
Sbjct 62 PPLALMPLIGISPRAESRALEVQGLLAGRGRHRAVGVADLFIAAVAEDSGLTLLHVDKDF 121
Query 119 ERIAAITRQPVE 130
+ I+ +T QPVE
Sbjct 122 DLISEVTNQPVE 133
>gi|297193814|ref|ZP_06911212.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721228|gb|EDY65136.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=140
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (36%), Positives = 55/123 (45%), Gaps = 1/123 (0%)
Query 1 MTTRYLLDKSAAYRA-HLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTY 59
M R+L+D SA + +P R P +E GL+ C T EF SA L T
Sbjct 1 MNHRFLIDTSALWELLRIPEARAAWAPFVESGLVLICEPTKAEFLHSATGPAHRDDLETR 60
Query 60 RRDALEYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFE 119
D P W Q LT KG HRS DL++ A A HHG+ V+H D DF
Sbjct 61 LHDMFPAARVPGGAWSWVDTAQYKLTQKGQHRSAGPLDLLLCATAVHHGLVVLHRDNDFV 120
Query 120 RIA 122
+A
Sbjct 121 SVA 123
>gi|315441643|ref|YP_004074520.1| nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
gi|315265298|gb|ADU02039.1| predicted nucleic acid-binding protein, contains PIN domain [Mycobacterium
sp. Spyr1]
Length=134
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/132 (40%), Positives = 73/132 (56%), Gaps = 7/132 (5%)
Query 3 TRYLLDKSAAYR-AHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRR 61
T +L+DKSA + P + +E + ERGL+ +T L+ G S R+ R+
Sbjct 2 TNWLIDKSAYTQLVASPDAQAWVERI-ERGLVRMSTVTRLQIGYSFRNGSQARSESGAPP 60
Query 62 DAL---EYVNTPDTVWVRAWEIQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDF 118
AL EY+ TP RA +Q L D+G HR+ IPDL++AAVAE G+ V+ D DF
Sbjct 61 LALMPLEYL-TP-AAEDRAVGVQLQLADRGLHRAPAIPDLLVAAVAEMAGLTVLALDTDF 118
Query 119 ERIAAITRQPVE 130
+ IA +T Q VE
Sbjct 119 DLIAQVTGQAVE 130
Lambda K H
0.323 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127792337190
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40