BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2767c

Length=117
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609904|ref|NP_217283.1|  hypothetical protein Rv2767c [Mycob...   233    9e-60
gi|121638646|ref|YP_978870.1|  hypothetical protein BCG_2784c [My...   230    5e-59
gi|340627769|ref|YP_004746221.1|  hypothetical protein MCAN_27951...   203    7e-51
gi|322703130|gb|EFY94744.1|  nonribosomal peptide synthase [Metar...  35.0    3.6  
gi|333382852|ref|ZP_08474517.1|  hypothetical protein HMPREF9455_...  34.7    4.5  


>gi|15609904|ref|NP_217283.1| hypothetical protein Rv2767c [Mycobacterium tuberculosis H37Rv]
 gi|31793942|ref|NP_856435.1| hypothetical protein Mb2789c [Mycobacterium bovis AF2122/97]
 gi|148662609|ref|YP_001284132.1| hypothetical protein MRA_2792 [Mycobacterium tuberculosis H37Ra]
 33 more sequence titles
 Length=117

 Score =  233 bits (593),  Expect = 9e-60, Method: Compositional matrix adjust.
 Identities = 117/117 (100%), Positives = 117/117 (100%), Gaps = 0/117 (0%)

Query  1    MVGYEGARGRAGREMSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA  60
            MVGYEGARGRAGREMSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA
Sbjct  1    MVGYEGARGRAGREMSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA  60

Query  61   QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  117
            QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK
Sbjct  61   QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  117


>gi|121638646|ref|YP_978870.1| hypothetical protein BCG_2784c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224991138|ref|YP_002645827.1| hypothetical protein JTY_2778 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121494294|emb|CAL72772.1| Possible membrane protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224774253|dbj|BAH27059.1| hypothetical protein JTY_2778 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602684|emb|CCC65360.1| possible membrane protein [Mycobacterium bovis BCG str. Moreau 
RDJ]
Length=117

 Score =  230 bits (587),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 116/117 (99%), Positives = 116/117 (99%), Gaps = 0/117 (0%)

Query  1    MVGYEGARGRAGREMSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA  60
            MVGYEGARGRAGREMSESATAGAR SRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA
Sbjct  1    MVGYEGARGRAGREMSESATAGARLSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVA  60

Query  61   QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  117
            QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK
Sbjct  61   QVWREVVQATAIAIAPPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  117


>gi|340627769|ref|YP_004746221.1| hypothetical protein MCAN_27951 [Mycobacterium canettii CIPT 
140010059]
 gi|340005959|emb|CCC45126.1| putative membrane protein [Mycobacterium canettii CIPT 140010059]
Length=103

 Score =  203 bits (516),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 102/103 (99%), Positives = 102/103 (99%), Gaps = 0/103 (0%)

Query  15   MSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVAQVWREVVQATAIAI  74
            MSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVAQVWREVVQA AIAI
Sbjct  1    MSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVAQVWREVVQAKAIAI  60

Query  75   APPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  117
            APPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK
Sbjct  61   APPLPVVSWGLISLAFLSHTVRGRYRRSPPAESGHHSNRRQAK  103


>gi|322703130|gb|EFY94744.1| nonribosomal peptide synthase [Metarhizium anisopliae ARSEF 23]
Length=10277

 Score = 35.0 bits (79),  Expect = 3.6, Method: Compositional matrix adjust.
 Identities = 26/93 (28%), Positives = 38/93 (41%), Gaps = 10/93 (10%)

Query  4     YEGARGRAGREMSESATAGARSSRIPFGIIRNHEAVRPRRSRHLNHARDTPQMVAVAQVW  63
             Y+G          E A +    S +PF          P     +NH  D  Q + VA  W
Sbjct  1956  YDGWSISLMLNKLEDAYSLNEGSALPFS---------PPLQTFVNHIMDIDQSI-VATYW  2005

Query  64    REVVQATAIAIAPPLPVVSWGLISLAFLSHTVR  96
              E  Q +   I P LP V++  +S AF+ H ++
Sbjct  2006  GEQFQGSEAQIFPSLPSVTYQPMSNAFIKHRIQ  2038


>gi|333382852|ref|ZP_08474517.1| hypothetical protein HMPREF9455_02683 [Dysgonomonas gadei ATCC 
BAA-286]
 gi|332828182|gb|EGK00894.1| hypothetical protein HMPREF9455_02683 [Dysgonomonas gadei ATCC 
BAA-286]
Length=551

 Score = 34.7 bits (78),  Expect = 4.5, Method: Composition-based stats.
 Identities = 19/65 (30%), Positives = 30/65 (47%), Gaps = 0/65 (0%)

Query  33   IRNHEAVRPRRSRHLNHARDTPQMVAVAQVWREVVQATAIAIAPPLPVVSWGLISLAFLS  92
            + N+E     + R LN  R+T   + VA +       +AI +   +P  +WG+  L FL 
Sbjct  470  VNNNELEITHKLRGLNDIRNTISHLVVAMIISASTIGSAILVLADMPPTAWGVSILGFLG  529

Query  93   HTVRG  97
              V G
Sbjct  530  FVVSG  534



Lambda     K      H
   0.320    0.131    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130038700308


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40