BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2768c Length=394 Score E Sequences producing significant alignments: (Bits) Value gi|57117022|ref|YP_177906.1| PPE family protein [Mycobacterium t... 751 0.0 gi|254232866|ref|ZP_04926193.1| PPE family protein [Mycobacteriu... 751 0.0 gi|340627770|ref|YP_004746222.1| PPE family protein [Mycobacteri... 748 0.0 gi|289553446|ref|ZP_06442656.1| PPE family protein [Mycobacteriu... 748 0.0 gi|31793943|ref|NP_856436.1| PPE family protein [Mycobacterium b... 748 0.0 gi|148823956|ref|YP_001288710.1| PPE family protein [Mycobacteri... 748 0.0 gi|15842306|ref|NP_337343.1| PPE family protein [Mycobacterium t... 747 0.0 gi|344220596|gb|AEN01227.1| PPE family protein [Mycobacterium tu... 746 0.0 gi|167968597|ref|ZP_02550874.1| PPE family protein [Mycobacteriu... 720 0.0 gi|254551827|ref|ZP_05142274.1| PPE family protein [Mycobacteriu... 716 0.0 gi|183981963|ref|YP_001850254.1| PPE family protein, PPE15_1 [My... 432 3e-119 gi|240173194|ref|ZP_04751852.1| PPE family protein, PPE15_1 [Myc... 403 3e-110 gi|118619703|ref|YP_908035.1| PPE family protein [Mycobacterium ... 393 3e-107 gi|183984423|ref|YP_001852714.1| PPE family protein, PPE15 [Myco... 392 4e-107 gi|289753101|ref|ZP_06512479.1| PPE family protein [Mycobacteriu... 349 4e-94 gi|253799929|ref|YP_003032930.1| PPE family protein [Mycobacteri... 348 1e-93 gi|15840468|ref|NP_335505.1| PPE family protein [Mycobacterium t... 347 1e-93 gi|339631101|ref|YP_004722743.1| PPE family protein [Mycobacteri... 346 4e-93 gi|121636969|ref|YP_977192.1| PPE family protein [Mycobacterium ... 345 6e-93 gi|344218866|gb|AEM99496.1| PPE family protein [Mycobacterium tu... 345 6e-93 gi|340626050|ref|YP_004744502.1| PPE family protein [Mycobacteri... 345 9e-93 gi|340627772|ref|YP_004746224.1| PPE family protein [Mycobacteri... 323 5e-86 gi|297730553|ref|ZP_06959671.1| PPE family protein [Mycobacteriu... 319 6e-85 gi|31793945|ref|NP_856438.1| PPE family protein [Mycobacterium b... 318 9e-85 gi|254550024|ref|ZP_05140471.1| PPE family protein [Mycobacteriu... 318 1e-84 gi|289746573|ref|ZP_06505951.1| PPE family protein [Mycobacteriu... 318 1e-84 gi|13377911|gb|AAK20895.1| Rv2770c-like protein [Mycobacterium m... 317 2e-84 gi|57117024|ref|YP_177677.1| PPE family protein [Mycobacterium t... 317 2e-84 gi|15842308|ref|NP_337345.1| PPE family protein [Mycobacterium t... 316 4e-84 gi|289444315|ref|ZP_06434059.1| PPE family protein [Mycobacteriu... 315 9e-84 gi|308374682|ref|ZP_07436980.2| LOW QUALITY PROTEIN: PPE family ... 307 2e-81 gi|183981960|ref|YP_001850251.1| PPE family protein, PPE44 [Myco... 305 1e-80 gi|294994137|ref|ZP_06799828.1| PPE family protein [Mycobacteriu... 290 2e-76 gi|289448425|ref|ZP_06438169.1| PPE family protein [Mycobacteriu... 290 3e-76 gi|167968599|ref|ZP_02550876.1| PPE family protein [Mycobacteriu... 289 7e-76 gi|306777051|ref|ZP_07415388.1| PPE family protein [Mycobacteriu... 288 1e-75 gi|118617719|ref|YP_906051.1| PPE family protein [Mycobacterium ... 287 2e-75 gi|118464457|ref|YP_880591.1| PPE family protein [Mycobacterium ... 261 1e-67 gi|212595937|gb|ACJ35536.1| PPE10 [Mycobacterium avium subsp. av... 260 3e-67 gi|41408673|ref|NP_961509.1| hypothetical protein MAP2575c [Myco... 259 5e-67 gi|240173300|ref|ZP_04751958.1| PPE family protein [Mycobacteriu... 250 3e-64 gi|254774062|ref|ZP_05215578.1| hypothetical protein MaviaA2_052... 248 1e-63 gi|336461476|gb|EGO40346.1| PPE-repeat containing protein [Mycob... 248 2e-63 gi|41407101|ref|NP_959937.1| hypothetical protein MAP1003c [Myco... 246 3e-63 gi|240170332|ref|ZP_04748991.1| PPE family protein, PPE15 [Mycob... 243 4e-62 gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 241 1e-61 gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ... 222 7e-56 gi|342862087|ref|ZP_08718730.1| hypothetical protein MCOL_24471 ... 220 3e-55 gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacteriu... 220 4e-55 gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 216 7e-54 >gi|57117022|ref|YP_177906.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662610|ref|YP_001284133.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|254365419|ref|ZP_04981464.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] 23 more sequence titles Length=394 Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/394 (100%), Positives = 394/394 (100%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM Sbjct 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|254232866|ref|ZP_04926193.1| PPE family protein [Mycobacterium tuberculosis C] gi|289754874|ref|ZP_06514252.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|124601925|gb|EAY60935.1| PPE family protein [Mycobacterium tuberculosis C] gi|289695461|gb|EFD62890.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|323718615|gb|EGB27779.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=462 Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/394 (100%), Positives = 394/394 (100%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 69 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 128 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 129 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 188 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 189 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 248 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 249 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 308 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 309 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 368 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM Sbjct 369 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 428 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 429 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 462 >gi|340627770|ref|YP_004746222.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005960|emb|CCC45127.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=394 Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/394 (99%), Positives = 393/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAA AAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAARAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM Sbjct 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|289553446|ref|ZP_06442656.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289438078|gb|EFD20571.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=411 Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/394 (99%), Positives = 393/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 18 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 77 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 78 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 137 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 138 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 197 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 198 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 257 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 258 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 317 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGS WAVPEEAGPVAAM Sbjct 318 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAVPEEAGPVAAM 377 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 378 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 411 >gi|31793943|ref|NP_856436.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638647|ref|YP_978871.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991139|ref|YP_002645828.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 8 more sequence titles Length=394 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/394 (99%), Positives = 393/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATI NAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 241 TFVQNAINGAVNTTAWFVMATIRNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM Sbjct 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|148823956|ref|YP_001288710.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253798149|ref|YP_003031150.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289762940|ref|ZP_06522318.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|148722483|gb|ABR07108.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253319652|gb|ACT24255.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289710446|gb|EFD74462.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|328457922|gb|AEB03345.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=394 Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/394 (99%), Positives = 393/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGS WAVPEEAGPVAAM Sbjct 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAVPEEAGPVAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|15842306|ref|NP_337343.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13882601|gb|AAK47157.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=462 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/394 (99%), Positives = 392/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 69 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 128 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 129 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 188 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 189 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 248 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 249 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 308 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 309 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 368 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM Sbjct 369 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 428 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAK GAYAGPRYGFKPIVMPKQVVV Sbjct 429 PGMAGISGAAKXXGAYAGPRYGFKPIVMPKQVVV 462 >gi|344220596|gb|AEN01227.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=394 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/394 (99%), Positives = 392/394 (99%), Gaps = 0/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAA EAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAALEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGS WAVPEEAGPVAAM Sbjct 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAVPEEAGPVAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|167968597|ref|ZP_02550874.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|294994139|ref|ZP_06799830.1| PPE family protein [Mycobacterium tuberculosis 210] gi|306777049|ref|ZP_07415386.1| PPE family protein [Mycobacterium tuberculosis SUMu001] 19 more sequence titles Length=380 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/380 (100%), Positives = 380/380 (100%), Gaps = 0/380 (0%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA Sbjct 1 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM Sbjct 61 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST Sbjct 121 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 254 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT Sbjct 181 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 240 Query 255 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL 314 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL Sbjct 241 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL 300 Query 315 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAKGAG 374 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAKGAG Sbjct 301 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAKGAG 360 Query 375 AYAGPRYGFKPIVMPKQVVV 394 AYAGPRYGFKPIVMPKQVVV Sbjct 361 AYAGPRYGFKPIVMPKQVVV 380 >gi|254551827|ref|ZP_05142274.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297635377|ref|ZP_06953157.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|297732375|ref|ZP_06961493.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313659707|ref|ZP_07816587.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=380 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/380 (99%), Positives = 379/380 (99%), Gaps = 0/380 (0%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA Sbjct 1 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM Sbjct 61 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST Sbjct 121 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 254 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT Sbjct 181 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 240 Query 255 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL 314 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL Sbjct 241 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL 300 Query 315 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAKGAG 374 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGS WAVPEEAGPVAAMPGMAGISGAAKGAG Sbjct 301 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAVPEEAGPVAAMPGMAGISGAAKGAG 360 Query 375 AYAGPRYGFKPIVMPKQVVV 394 AYAGPRYGFKPIVMPKQVVV Sbjct 361 AYAGPRYGFKPIVMPKQVVV 380 >gi|183981963|ref|YP_001850254.1| PPE family protein, PPE15_1 [Mycobacterium marinum M] gi|183175289|gb|ACC40399.1| PPE family protein, PPE15_1 [Mycobacterium marinum M] Length=393 Score = 432 bits (1112), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 294/394 (75%), Positives = 324/394 (83%), Gaps = 1/394 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGA P+MAA A WN LAVEL TTA+S ESV+ QLTTEQW+GP Sbjct 1 MDFGALPPEINSTRMYAGAGATPMMAAAAAWNRLAVELGTTAASFESVVTQLTTEQWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS SM VA QPYLAWLTYTAESAAHA AQA ASAAAFEAAFA TVPPA VAANRA LA L Sbjct 61 ASTSMAVAVQPYLAWLTYTAESAAHAGAQATASAAAFEAAFAATVPPAAVAANRAQLAML 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 V+TN+LGQNTPAI ATEA YGEMWAQDALAMYGYAASSAAAG LNPL TP+Q AN AGLA Sbjct 121 VSTNILGQNTPAIAATEAQYGEMWAQDALAMYGYAASSAAAGTLNPLTTPAQIANPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAVS AAAA+TV+QVGLG+LI+N+P AVMG ASP S DA GL ++QDI +LG Sbjct 181 SQAAAVSQAAAATTVEQVGLGNLITNVPGAVMGLASPAASLVDATGLSTLVQDISSVLGT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 F+QNAINGAVNT AWFVMA IPN+VFLGH A+ A AAD PA A AAGL H V Sbjct 241 PFLQNAINGAVNTAAWFVMAAIPNSVFLGHTLNAIETAGAPVAADLAPALAPAAGLRHAV 300 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 P+ GGA + A LG+A+ VG LSVP GWS+AAPA+TSGTTAL+GSGWAVPEE+GP+AAM Sbjct 301 APLSFGGAGVEAGLGQAAGVGKLSVPVGWSSAAPALTSGTTALDGSGWAVPEESGPIAAM 360 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PG G++ A KG G +AGPRYGFKP VMPKQVVV Sbjct 361 PGGPGMAVAGKG-GGFAGPRYGFKPTVMPKQVVV 393 >gi|240173194|ref|ZP_04751852.1| PPE family protein, PPE15_1 [Mycobacterium kansasii ATCC 12478] Length=384 Score = 403 bits (1035), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 297/394 (76%), Positives = 319/394 (81%), Gaps = 10/394 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGAAP+MAA A W+ LAVELSTTA+SVESVI QLTTEQWLGP Sbjct 1 MDFGALPPEINSARMYAGAGAAPMMAAAAAWHRLAVELSTTAASVESVITQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSM AAQPYLAWLTYTAESAAHA +QA ASAAAFEAAFA TVPPAEVAANRALLAAL Sbjct 61 ASMSMAAAAQPYLAWLTYTAESAAHAGSQATASAAAFEAAFAATVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN+LGQNTPAI ATEAHYGEMWAQDALAMYGYAASSAAAG LNPL TPS+ AN AGLA Sbjct 121 VATNILGQNTPAIAATEAHYGEMWAQDALAMYGYAASSAAAGTLNPLTTPSRIANPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV AAA T QQVGL +LI+N+PN VMG ASP S DA LGGII D LLG Sbjct 181 AQAAAVGQAAATGTAQQVGLANLITNVPNTVMGLASPAASVFDATALGGIIDD---LLGN 237 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 TFVQNAINGAVNT AWFVMATIPNAVFLGHA +AA VP A AA + Sbjct 238 TFVQNAINGAVNTAAWFVMATIPNAVFLGHALDVEG----LSAAQLVPTIAGAAATTNAA 293 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 G S+ A +G+AS+VG L+VPA WS+AAPA+ SGTTALEGSGWAVPEEAGPV AM Sbjct 294 A--PAGAGSVLAGMGQASAVGKLAVPASWSSAAPALPSGTTALEGSGWAVPEEAGPVTAM 351 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 PG G++ A+KG G YAGPRYGF+P VMPKQVVV Sbjct 352 PGGPGMAAASKG-GGYAGPRYGFRPTVMPKQVVV 384 >gi|118619703|ref|YP_908035.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118571813|gb|ABL06564.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=390 Score = 393 bits (1009), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 274/396 (70%), Positives = 307/396 (78%), Gaps = 8/396 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAA A WNGLAVEL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAASAAWNGLAVELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+M+ AAQPYLAWLTYT+E+A HA AQA ASAAA+EAAFAMTVPP VAANR+LLAAL Sbjct 61 ASMAMIAAAQPYLAWLTYTSEAAMHAGAQAAASAAAYEAAFAMTVPPPVVAANRSLLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG NTPAIMATEA Y EMWAQDA AMYGYAA+S+ +G L PL TP QT N GLA Sbjct 121 VATNFLGINTPAIMATEALYAEMWAQDAGAMYGYAAASSTSGSLQPLSTPQQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAVS AAA++ G SL+SNLPN +MG ASP+TSA DA GLGGIIQDIE+ LGI Sbjct 181 AQSAAVSQAAASAAATD-GTTSLLSNLPNTIMGLASPITSAIDATGLGGIIQDIEDFLGI 239 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNP--ATVTAAADAVPAAAAAAGLAH 298 FV N INGAVNT AW+ ATIP A+FL +A P A A A AAAA AGLA+ Sbjct 240 PFVANVINGAVNTAAWYTTATIPTAIFLANALNTGAPVIAAEGAIEAAEGAAAATAGLAN 299 Query 299 TVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVA 358 TVTP GVG A+LGEA+ VG L+VP WS A P + T AL GSGW VPEEA PV+ Sbjct 300 TVTPTGVG-----AALGEATLVGKLAVPTSWSNALPKTAATTGALGGSGWTVPEEAAPVS 354 Query 359 AMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 + G+ G++ AAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 355 GVAGVPGMAAAAKGAGAYAGPRYGFKPIVMPKQVVV 390 >gi|183984423|ref|YP_001852714.1| PPE family protein, PPE15 [Mycobacterium marinum M] gi|183177749|gb|ACC42859.1| PPE family protein, PPE15 [Mycobacterium marinum M] Length=390 Score = 392 bits (1008), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 272/396 (69%), Positives = 307/396 (78%), Gaps = 8/396 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAA A WNGLAVEL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAASAAWNGLAVELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+M+ AAQPYLAWLTYT+E+A HA AQA ASAAA+EAAFAMTVPP VAANR+LLAAL Sbjct 61 ASMAMIAAAQPYLAWLTYTSEAAMHAGAQAAASAAAYEAAFAMTVPPPVVAANRSLLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG NTPAIMATEA Y EMWAQDA AMYGYAA+S+ +G L PL TP QT N GLA Sbjct 121 VATNFLGINTPAIMATEALYAEMWAQDAGAMYGYAAASSTSGSLQPLSTPQQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAVS AAA++ G+ SL+SNLPN +MG ASP+TSA DA GLGGIIQDIE+ LGI Sbjct 181 AQSAAVSQAAASAAATD-GITSLLSNLPNTIMGLASPITSAIDATGLGGIIQDIEDFLGI 239 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPAT--VTAAADAVPAAAAAAGLAH 298 FV N ING VNT AW+ ATIP A+FL +A P A A AAAA AGLA+ Sbjct 240 GFVANVINGGVNTAAWYTTATIPTAIFLANALDTGAPVVAAEGAIEAAEGAAAATAGLAN 299 Query 299 TVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVA 358 TVTP GVG A+LGEA+ VG L+VP WS+A P + T AL GSGW VPEEA PV+ Sbjct 300 TVTPTGVG-----AALGEATLVGKLAVPTSWSSALPETAATTGALGGSGWTVPEEAAPVS 354 Query 359 AMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 + G+ G++ AAKGAGAYAGPRYGFKPIVMPKQVVV Sbjct 355 GVAGVPGMAAAAKGAGAYAGPRYGFKPIVMPKQVVV 390 >gi|289753101|ref|ZP_06512479.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289693688|gb|EFD61117.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=391 Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 280/398 (71%), Positives = 308/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 SQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|253799929|ref|YP_003032930.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289555178|ref|ZP_06444388.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|297633568|ref|ZP_06951348.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|253321432|gb|ACT26035.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289439810|gb|EFD22303.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|328459673|gb|AEB05096.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=391 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 280/398 (71%), Positives = 308/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVTAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|15840468|ref|NP_335505.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31792231|ref|NP_854724.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116813|ref|YP_177778.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 50 more sequence titles Length=391 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 280/398 (71%), Positives = 308/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|339631101|ref|YP_004722743.1| PPE family protein [Mycobacterium africanum GM041182] gi|339330457|emb|CCC26122.1| PPE family protein [Mycobacterium africanum GM041182] Length=391 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 279/398 (71%), Positives = 307/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFG LPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGTLPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|121636969|ref|YP_977192.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989441|ref|YP_002644128.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492616|emb|CAL71084.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772554|dbj|BAH25360.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600985|emb|CCC63656.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=391 Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 279/398 (71%), Positives = 307/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTKPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|344218866|gb|AEM99496.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=391 Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 279/398 (71%), Positives = 307/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVTAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN A NT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSADNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|340626050|ref|YP_004744502.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004240|emb|CCC43381.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=391 Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 279/398 (71%), Positives = 307/398 (78%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLA 297 FV N IN AVNT AW+V A IP A+FL +A A + A A A+AAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 Query 357 VAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 V M M G++ AAK GAYAGPRYGFKP VMPKQVVV Sbjct 356 VTGM--MPGMASAAKSTGAYAGPRYGFKPTVMPKQVVV 391 >gi|340627772|ref|YP_004746224.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005962|emb|CCC45129.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=382 Score = 323 bits (827), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 233/394 (60%), Positives = 271/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A+++ +QVGL LIS++ +AVM FASP+ SAAD ++ + + L + Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVMSFASPVMSAADTG-----LEAVRQFLNL 235 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A ++ A A A A A A Sbjct 236 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVDGAAPGGGAPAAVAHAVAPAGV 294 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 295 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 345 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 346 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|297730553|ref|ZP_06959671.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313657882|ref|ZP_07814762.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=377 Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 267/384 (70%), Positives = 295/384 (77%), Gaps = 11/384 (2%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GPASM+MV AAQPYLA Sbjct 1 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVTAAQPYLA 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAALVATNVLG NTPAIM Sbjct 61 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Q+AAV AAA + Sbjct 121 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 254 V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL FV N IN AVNT Sbjct 181 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 240 Query 255 AWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLT 311 AW+V A IP A+FL +A A + A A A+AAAAGLA +VTP G+G Sbjct 241 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLG----- 295 Query 312 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGPVAAMPGMAGISGAA 370 ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGPV M M G++ AA Sbjct 296 ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAA 353 Query 371 KGAGAYAGPRYGFKPIVMPKQVVV 394 KG GAYAGPRYGFKP VMPKQVVV Sbjct 354 KGTGAYAGPRYGFKPTVMPKQVVV 377 >gi|31793945|ref|NP_856438.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638649|ref|YP_978873.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991141|ref|YP_002645830.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 15 more sequence titles Length=382 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 232/394 (59%), Positives = 270/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A+++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 235 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 236 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 294 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 295 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 345 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 346 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|254550024|ref|ZP_05140471.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289744777|ref|ZP_06504155.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|294995228|ref|ZP_06800919.1| PPE family protein [Mycobacterium tuberculosis 210] gi|298524536|ref|ZP_07011945.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|289685305|gb|EFD52793.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|298494330|gb|EFI29624.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=377 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 267/384 (70%), Positives = 295/384 (77%), Gaps = 11/384 (2%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GPASM+MV AAQPYLA Sbjct 1 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAALVATNVLG NTPAIM Sbjct 61 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Q+AAV AAA + Sbjct 121 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 254 V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL FV N IN AVNT Sbjct 181 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 240 Query 255 AWFVMATIPNAVFLGHAF---AALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLT 311 AW+V A IP A+FL +A A + A A A+AAAAGLA +VTP G+G Sbjct 241 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLG----- 295 Query 312 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGPVAAMPGMAGISGAA 370 ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGPV M M G++ AA Sbjct 296 ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAA 353 Query 371 KGAGAYAGPRYGFKPIVMPKQVVV 394 KG GAYAGPRYGFKP VMPKQVVV Sbjct 354 KGTGAYAGPRYGFKPTVMPKQVVV 377 >gi|289746573|ref|ZP_06505951.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687101|gb|EFD54589.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=402 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 231/394 (59%), Positives = 270/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 21 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 80 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 81 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 140 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 141 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 200 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A+++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 201 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 255 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 256 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 314 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 315 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 365 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 366 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 399 >gi|13377911|gb|AAK20895.1| Rv2770c-like protein [Mycobacterium microti] gi|13936234|gb|AAK40252.1| 2770c [Mycobacterium microti] Length=397 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 231/394 (59%), Positives = 270/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 16 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 75 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 76 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 135 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 136 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 195 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A+++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 196 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 250 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 251 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 309 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 310 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 360 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 361 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 394 >gi|57117024|ref|YP_177677.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662612|ref|YP_001284135.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148823958|ref|YP_001288712.1| PPE family protein [Mycobacterium tuberculosis F11] 8 more sequence titles Length=382 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 232/394 (59%), Positives = 269/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 181 HQAAAVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 235 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 236 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 294 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 295 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 345 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 346 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|15842308|ref|NP_337345.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253798147|ref|YP_003031148.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254232868|ref|ZP_04926195.1| PPE family protein [Mycobacterium tuberculosis C] 10 more sequence titles Length=402 Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 231/394 (59%), Positives = 269/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GP Sbjct 21 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 80 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 81 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 140 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 141 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 200 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 201 HQAAAVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 255 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 256 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 314 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 315 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 365 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 366 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 399 >gi|289444315|ref|ZP_06434059.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289570949|ref|ZP_06451176.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289751427|ref|ZP_06510805.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289754876|ref|ZP_06514254.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289417234|gb|EFD14474.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289544703|gb|EFD48351.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289692014|gb|EFD59443.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289695463|gb|EFD62892.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=382 Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 231/394 (59%), Positives = 269/394 (69%), Gaps = 18/394 (4%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+ P Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMVP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 ATN+LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAV A A+++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNL 235 Query 241 T---FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLA 297 FV++A +G + A F A I N L A + A A A A A A Sbjct 236 DVPLFVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV 294 Query 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPV 357 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+ Sbjct 295 --------GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPI 345 Query 358 AAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 A MP G+ AA GA +GPRYG KPIVMPK Sbjct 346 AVMPPAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|308374682|ref|ZP_07436980.2| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308341059|gb|EFP29910.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis SUMu006] Length=378 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 228/390 (59%), Positives = 265/390 (68%), Gaps = 18/390 (4%) Query 5 ALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMS 64 ALPPE+NS RMY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GPAS+S Sbjct 1 ALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLS 60 Query 65 MVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATN 124 M A QPYL WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L ATN Sbjct 61 MAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATN 120 Query 125 VLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAA 184 +LGQN AI ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA QAA Sbjct 121 ILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAA 180 Query 185 AVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGIT--- 241 AV A A++ +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + Sbjct 181 AVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNLDVPL 235 Query 242 FVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVT 301 FV++A +G + A F A I N L A + A A A A A A Sbjct 236 FVESAFHG-LGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV---- 290 Query 302 PVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMP 361 GG +LTA LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+A MP Sbjct 291 ----GGTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPIAVMP 345 Query 362 GMAGISGAAKGAGAYAGPRYGFKPIVMPKQ 391 G+ AA GA +GPRYG KPIVMPK Sbjct 346 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 375 >gi|183981960|ref|YP_001850251.1| PPE family protein, PPE44 [Mycobacterium marinum M] gi|183175286|gb|ACC40396.1| PPE family protein, PPE44 [Mycobacterium marinum M] Length=377 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 233/394 (60%), Positives = 277/394 (71%), Gaps = 21/394 (5%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DFGALPPEINS RMY GAGAAPL+ A A WN +AVELST AS++ESVI +L+++QWLG Sbjct 5 VDFGALPPEINSARMYFGAGAAPLLGAAAAWNDIAVELSTAASAIESVITRLSSDQWLGT 64 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM AAQP LAWL+YTAES+A AAAQA AS AAFE AFAMTVPPAEVAANRA LA L Sbjct 65 ASLSMAAAAQPLLAWLSYTAESSALAAAQAAASVAAFETAFAMTVPPAEVAANRARLAEL 124 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +ATN+ GQN PAI ATEA YGEMWAQDA AMYGYAAS A A RLNPL PS+T N G+A Sbjct 125 MATNIFGQNVPAIAATEARYGEMWAQDASAMYGYAASCAGAVRLNPLTRPSETTNPGGIA 184 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAVSHAAA+ +VQQ G +LIS + +AVM ++P+TS+ LG I+DI L Sbjct 185 RQAAAVSHAAASVSVQQAGFENLISTVSDAVMSLSAPVTSSPHVTSLGAFIEDIIFLDIP 244 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 FV++A +G T + AT+ A L +A T T+A PAAAA + LA TV Sbjct 245 RFVESAFHGLGATADY---ATMIAANLLTLQTSA---NTATSAGGVAPAAAAGSALAQTV 298 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 T GV G+ASSVG LSVP GW+TAAPA T G + +G+GWAVP+E + Sbjct 299 TSAGV---------GDASSVGALSVPVGWTTAAPAATGGAAS-DGTGWAVPDE-----DV 343 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 P AG+ GAGA GPRYG KP VMPK+V+V Sbjct 344 PSPAGMVAGTNGAGARPGPRYGVKPRVMPKKVLV 377 >gi|294994137|ref|ZP_06799828.1| PPE family protein [Mycobacterium tuberculosis 210] gi|339295620|gb|AEJ47731.1| Rv2770c-like protein [Mycobacterium tuberculosis CCDC5079] gi|339299237|gb|AEJ51347.1| Rv2770c-like protein [Mycobacterium tuberculosis CCDC5180] Length=368 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/380 (58%), Positives = 257/380 (68%), Gaps = 18/380 (4%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GPAS+SM A QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLV 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L ATN+LGQN AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA QAAAV A A+++ Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAS 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGIT---FVQNAINGAV 251 +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + FV++A +G + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNLDVPLFVESAFHG-L 234 Query 252 NTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLT 311 A F A I N L A + A A A A A A GG +LT Sbjct 235 GGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV--------GGTALT 286 Query 312 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAK 371 A LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+A MP G+ AA Sbjct 287 ADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPIAVMPPAPGMVVAAN 345 Query 372 GAGAYAGPRYGFKPIVMPKQ 391 GA +GPRYG KPIVMPK Sbjct 346 SVGADSGPRYGVKPIVMPKH 365 >gi|289448425|ref|ZP_06438169.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289421383|gb|EFD18584.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=232 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDAL 149 VATNVLGQNTPAIMATEAHYGEMWAQDAL Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDAL 149 >gi|167968599|ref|ZP_02550876.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|254551829|ref|ZP_05142276.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297635379|ref|ZP_06953159.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] 14 more sequence titles Length=368 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 220/380 (58%), Positives = 256/380 (68%), Gaps = 18/380 (4%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GPAS+SM A QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLV 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L ATN+LGQN AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA QAAAV A A++ Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAF 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGIT---FVQNAINGAV 251 +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + FV++A +G + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNLDVPLFVESAFHG-L 234 Query 252 NTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLT 311 A F A I N L A + A A A A A A GG +LT Sbjct 235 GGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV--------GGTALT 286 Query 312 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAK 371 A LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+A MP G+ AA Sbjct 287 ADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPIAVMPPAPGMVVAAN 345 Query 372 GAGAYAGPRYGFKPIVMPKQ 391 GA +GPRYG KPIVMPK Sbjct 346 SVGADSGPRYGVKPIVMPKH 365 >gi|306777051|ref|ZP_07415388.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|306973166|ref|ZP_07485827.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|307080875|ref|ZP_07490045.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308214561|gb|EFO73960.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308357429|gb|EFP46280.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308361380|gb|EFP50231.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=368 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 219/380 (58%), Positives = 255/380 (68%), Gaps = 18/380 (4%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MY GAGAA L+AA A WNG+AVE+ST ASSV SVI +L+TE W+GPAS+SM QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAATVQPYLV 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLT TAES+A AAAQAMASAAAFE AFA+TVPPAEV ANRALLA L ATN+LGQN AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 ATEA YGEMWAQDA AMYGYAA+SA A RLNPL PS N AGLA QAAAV A A++ Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAF 180 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGIT---FVQNAINGAV 251 +QVGL LIS++ +AV+ FASP+ SAAD ++ + + L + FV++A +G + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAADTG-----LEAVRQFLNLDVPLFVESAFHG-L 234 Query 252 NTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLT 311 A F A I N L A + A A A A A A GG +LT Sbjct 235 GGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGV--------GGTALT 286 Query 312 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAK 371 A LG AS VG LSVPA WSTAA T+ AL+G+GWAVPEE GP+A MP G+ AA Sbjct 287 ADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAVPEEDGPIAVMPPAPGMVVAAN 345 Query 372 GAGAYAGPRYGFKPIVMPKQ 391 GA +GPRYG KPIVMPK Sbjct 346 SVGADSGPRYGVKPIVMPKH 365 >gi|118617719|ref|YP_906051.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569829|gb|ABL04580.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=373 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 231/394 (59%), Positives = 274/394 (70%), Gaps = 21/394 (5%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDFGALPPEINS RMY GAGAAPL+ A A WN +AVELST AS++ESVI +L+++QWLG Sbjct 1 MDFGALPPEINSARMYFGAGAAPLLGAAAAWNDIAVELSTAASAIESVITRLSSDQWLGT 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM AAQP LAWL+YTAES+A AAAQA AS AAFE AFAMTVPPAEVAANRA LAAL Sbjct 61 ASLSMAAAAQPLLAWLSYTAESSALAAAQAAASVAAFETAFAMTVPPAEVAANRARLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +ATN+ GQN PAI ATEA YGEMWAQDA AMYGYAAS A A RLNPL PS+T N G+A Sbjct 121 MATNIFGQNVPAIAATEARYGEMWAQDASAMYGYAASCAGAVRLNPLTRPSETTNPGGIA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QA AVSHAAA+ +VQQ G +LIS + +AV + P+TS+ LG I+DI L Sbjct 181 SQAVAVSHAAASVSVQQAGFENLISTVSDAVTSLSGPVTSSPHVTSLGAFIEDIIFLDIP 240 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 FV++A +G + TA + N + L + T T+A PAAAA + LA TV Sbjct 241 RFVESAFHG-LGATADYATMIAANLLTL-----QTSANTATSAGGVAPAAAAGSALAQTV 294 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 T GV G+ASSVG LSVP GW+TAAPA T G + +G+GWAVP+E + Sbjct 295 TSAGV---------GDASSVGALSVPVGWTTAAPAATGGAAS-DGTGWAVPDE-----DV 339 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 P AG+ GAGA GPRYG KP VMPK+V+V Sbjct 340 PSPAGMVAGTNGAGARPGPRYGVKPRVMPKKVLV 373 >gi|118464457|ref|YP_880591.1| PPE family protein [Mycobacterium avium 104] gi|118165744|gb|ABK66641.1| ppe family protein [Mycobacterium avium 104] Length=383 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 200/394 (51%), Positives = 243/394 (62%), Gaps = 13/394 (3%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 DFGALPPE+NSTRMY GAGAAP+MAA A ++ LA ELSTTA++ +S I LT E+W+GP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ++ +MV A QPY+ W+ TA AAAQAMASAAA+E AFAMTVPPA VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +A+NVLGQN AI ATEA YGEMWAQDA AMYGYAASSA AG+L+PL +P+ T GL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAVS A A++ Q GL ++N+PN V A+P AD GL ++ LLG Sbjct 183 AQAAAVS-GATATSAQTSGLQGTVANVPNVVRTLAAP----ADPPGLSA----LDNLLGN 233 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 V N N N +W V TI + + H A V A G A Sbjct 234 PVVNNVGNAGFNVVSWNVFNTIVSNILYNHTLDTAAAAGVAGEVGGAVGGGALVGAAAPA 293 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 T GVG A + AS+G A++VG LS PA WS AP T + + WA P E A Sbjct 294 T-AGVGAAPVLASMGSAATVGELSTPATWS--APTPEPAATTVGATEWASPAEEPHTAWA 350 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 GM ++ A +G G GPRYG KP VMP ++ V Sbjct 351 TGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|212595937|gb|ACJ35536.1| PPE10 [Mycobacterium avium subsp. avium] Length=383 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 199/394 (51%), Positives = 243/394 (62%), Gaps = 13/394 (3%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 DFGALPPE+NSTRMY GAGAAP+MAA A ++ LA ELSTTA++ +S I LT E+W+GP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ++ +MV A QPY+ W+ TA AAAQAMASAAA+E AFAMTVPPA VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +A+NVLGQN AI ATEA YGEMWAQDA AMYGYAASSA AG+L+PL +P+ T GL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAVS A A++ Q GL ++N+PN V A+P AD GL ++ LLG Sbjct 183 AQAAAVS-GATATSAQTSGLQGTVANVPNVVRTLAAP----ADPPGLSA----LDNLLGN 233 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 V N N + +W V TI + + H A V A G A Sbjct 234 PVVNNVGNAGFDVVSWNVFNTIVSNILYNHTLDTAAAAGVAGEVGGAVGGGALVGAAAPA 293 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 T GVG A + AS+G A++VG LS PA WS AP T + + WA P E A Sbjct 294 T-AGVGAAPVLASMGSAATVGELSTPATWS--APTPEPAATTVGATEWASPAEEPHTAWA 350 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 GM ++ A +G G GPRYG KP VMP ++ V Sbjct 351 TGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|41408673|ref|NP_961509.1| hypothetical protein MAP2575c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397031|gb|AAS04892.1| hypothetical protein MAP_2575c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458621|gb|EGO37586.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=383 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 199/394 (51%), Positives = 243/394 (62%), Gaps = 13/394 (3%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 DFGALPPE+NSTRMY GAGAAP+MAA A ++ LA ELSTTA++ +S I LT E+W+GP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 ++ +MV A QPY+ W+ TA AAAQAMASAAA+E AFAMTVPPA VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +A+NVLGQN AI ATEA YGEMWAQDA AMYGYAASSA AG+L+PL +P+ T GL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 QAAAVS A A++ Q GL ++N+PN V A+P AD GL ++ LLG Sbjct 183 AQAAAVS-GATATSAQTSGLQGTVANVPNVVRTLAAP----ADPPGLTA----LDNLLGN 233 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 V N N + +W V TI + + H A V A G A Sbjct 234 PVVNNVGNAGFDVVSWNVFNTIVSNILYNHTLDTAAAAGVAGEVGGAVGGGALVGAAAPA 293 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 T GVG A + AS+G A++VG LS PA WS AP T + + WA P E A Sbjct 294 T-AGVGAAPVLASMGSAATVGELSTPATWS--APTPEPAATTVGATEWASPAEEPHTAWA 350 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 GM ++ A +G G GPRYG KP VMP ++ V Sbjct 351 TGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|240173300|ref|ZP_04751958.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=369 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 221/378 (59%), Positives = 255/378 (68%), Gaps = 11/378 (2%) Query 15 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 74 MYAGAGAA L+AA A WNG+AVELST AS ES++ +L TE WLGPAS+SM AAQP +A Sbjct 1 MYAGAGAAELVAAAAAWNGIAVELSTAASCFESIVTRLRTEPWLGPASLSMAAAAQPLVA 60 Query 75 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 134 WLT TAES+A AAAQAMASAAAFEA AMTV P EVAANRA LA LVATN+LGQN PAI Sbjct 61 WLTDTAESSALAAAQAMASAAAFEAGRAMTVAPGEVAANRAQLAELVATNILGQNMPAIA 120 Query 135 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 194 A EA YGEMWAQDA AMYGYAA+SA AGRLNPL PS N AG+A A + AA + Sbjct 121 AVEARYGEMWAQDAAAMYGYAAASAVAGRLNPLTGPSAVTNPAGIA--GQAAAVGQAAGS 178 Query 195 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 254 V Q GL +LISNLPNAVM ASP S A +GL ++ + + FV +A +G Sbjct 179 VPQTGLNNLISNLPNAVMSLASPAPSEAQVSGLNAVLSFLTNPNPL-FVDHAWHGVSGVL 237 Query 255 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASL 314 A F MA L + + AT A+ A P AA A A TVTP GVG + A L Sbjct 238 ADFDMA-------LTTSSDGADVATGVTASGAGPVAATTAASARTVTPAGVGATPIVAGL 290 Query 315 GEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAMPGMAGISGAAKGAG 374 G ASSVG LSVPA WSTAAPA+T+ ++ G+GWAVPEE +AA P G+ AA GAG Sbjct 291 GTASSVGRLSVPASWSTAAPAVTADIASV-GTGWAVPEEDAAIAAAPFAPGMVVAADGAG 349 Query 375 AYAGPRYGFKPIVMPKQV 392 A GPRYG +P VMP+ V Sbjct 350 AGVGPRYGVRPTVMPRHV 367 >gi|254774062|ref|ZP_05215578.1| hypothetical protein MaviaA2_05233 [Mycobacterium avium subsp. avium ATCC 25291] gi|212595906|gb|ACJ35532.1| PPE6 [Mycobacterium avium subsp. avium] gi|212595970|gb|ACJ35540.1| PPE15 [Mycobacterium avium subsp. avium] Length=382 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 220/408 (54%), Positives = 263/408 (65%), Gaps = 42/408 (10%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DF A+PPEI S MYAGAG+ PLMAA + L+ E+S+TAS ES+I LTTEQW G Sbjct 3 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 62 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 S + AAQP +++LT TA + A+AQA ASAAA+EAAFA TVPP +AANR+LLA L Sbjct 63 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 122 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG N+ AI ATEA Y EMW QDA M Y A+SAAAG L P+ + T N Sbjct 123 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTN----P 178 Query 181 GQAAAVSHAAAA-----STVQQVGLG--SLISNLPNAVMGFASPLTSAADAAGLGGIIQD 233 G AAAV + A A ST Q GL SLI++ P G++Q Sbjct 179 GAAAAVDNGAVAFDATNSTAQTAGLDLSSLITSPPT------------------DGLLQS 220 Query 234 IEELLGITFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAA 293 I++LLG NA NGA+NT AW+V ATIPNAV LG + PA + D+V AA A Sbjct 221 IDDLLGTPSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTV-PAIPFSLTDSVAPAAGA 279 Query 294 AGLAHTVTP---VG-VGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTA--LEGSG 347 A +TP VG V GA +A++GEAS+VGGLSVPA WS AAPA + ++A LEGSG Sbjct 280 A-----ITPGMMVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSG 334 Query 348 WAVPEEAGPVAAMPGMAGISGAAKGAGAY-AGPRYGFKPIVMPKQVVV 394 W V EA PV AMPGM G + AAKGAGAY +GPRYGFKPIVMPKQVVV Sbjct 335 WTVASEAEPVTAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 382 >gi|336461476|gb|EGO40346.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=690 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 220/408 (54%), Positives = 263/408 (65%), Gaps = 42/408 (10%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DF A+PPEI S MYAGAG+ PLMAA + L+ E+S+TAS ES+I LTTEQW G Sbjct 311 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 370 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 S + AAQP +++LT TA + A+AQA ASAAA+EAAFA TVPP +AANR+LLA L Sbjct 371 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 430 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG N+ AI ATEA Y EMW QDA M Y A+SAAAG L P+ + T N Sbjct 431 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTN----P 486 Query 181 GQAAAVSHAAAA-----STVQQVGLG--SLISNLPNAVMGFASPLTSAADAAGLGGIIQD 233 G AAAV + A A ST Q GL SLI++ P G++Q Sbjct 487 GAAAAVDNGAVAFDATNSTAQTAGLDLSSLITSPPT------------------DGLLQS 528 Query 234 IEELLGITFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAA 293 I++LLG NA NGA+NT AW+V ATIPNAV LG + PA + D+V AA A Sbjct 529 IDDLLGTPSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTV-PAIPFSLTDSVAPAAGA 587 Query 294 AGLAHTVTP---VG-VGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTA--LEGSG 347 A +TP VG V GA +A++GEAS+VGGLSVPA WS AAPA + ++A LEGSG Sbjct 588 A-----ITPGMMVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSG 642 Query 348 WAVPEEAGPVAAMPGMAGISGAAKGAGAY-AGPRYGFKPIVMPKQVVV 394 W V EA PV AMPGM G + AAKGAGAY +GPRYGFKPIVMPKQVVV Sbjct 643 WTVASEAEPVTAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 690 >gi|41407101|ref|NP_959937.1| hypothetical protein MAP1003c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395452|gb|AAS03320.1| PE [Mycobacterium avium subsp. paratuberculosis K-10] Length=696 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 220/408 (54%), Positives = 263/408 (65%), Gaps = 42/408 (10%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DF A+PPEI S MYAGAG+ PLMAA + L+ E+S+TAS ES+I LTTEQW G Sbjct 317 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 376 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 S + AAQP +++LT TA + A+AQA ASAAA+EAAFA TVPP +AANR+LLA L Sbjct 377 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 436 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG N+ AI ATEA Y EMW QDA M Y A+SAAAG L P+ + T N Sbjct 437 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTN----P 492 Query 181 GQAAAVSHAAAA-----STVQQVGLG--SLISNLPNAVMGFASPLTSAADAAGLGGIIQD 233 G AAAV + A A ST Q GL SLI++ P G++Q Sbjct 493 GAAAAVDNGAVAFDATNSTAQTAGLDLSSLITSPPT------------------DGLLQS 534 Query 234 IEELLGITFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAA 293 I++LLG NA NGA+NT AW+V ATIPNAV LG + PA + D+V AA A Sbjct 535 IDDLLGTPSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTV-PAIPFSLTDSVAPAAGA 593 Query 294 AGLAHTVTP---VG-VGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTA--LEGSG 347 A +TP VG V GA +A++GEAS+VGGLSVPA WS AAPA + ++A LEGSG Sbjct 594 A-----ITPGMMVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSG 648 Query 348 WAVPEEAGPVAAMPGMAGISGAAKGAGAY-AGPRYGFKPIVMPKQVVV 394 W V EA PV AMPGM G + AAKGAGAY +GPRYGFKPIVMPKQVVV Sbjct 649 WTVASEAEPVTAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 696 >gi|240170332|ref|ZP_04748991.1| PPE family protein, PPE15 [Mycobacterium kansasii ATCC 12478] Length=261 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 191/260 (74%), Positives = 215/260 (83%), Gaps = 0/260 (0%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDF ALPPEINS RMYAGAGA PL+AA A WNGLA+EL+TTA+S+ES++ LT EQWLGP Sbjct 1 MDFAALPPEINSGRMYAGAGAGPLLAAAAAWNGLALELNTTAASIESIVTLLTGEQWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS+SM AAQPY+AWLTYT SA HA AQAMASAAA+EAAFA TVPP +AANRALLAAL Sbjct 61 ASLSMAAAAQPYIAWLTYTGASAEHAGAQAMASAAAYEAAFAATVPPPIIAANRALLAAL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN LG NTPAIMATEAHY EMWAQDA+AMY YAASSA +G LNPL TPSQ+ N GLA Sbjct 121 VATNFLGINTPAIMATEAHYMEMWAQDAMAMYAYAASSANSGTLNPLTTPSQSTNPGGLA 180 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q+AAV AAAA+TV QVGL SLI++LPNAVM ASP+TS ADA GL GI+Q I++LL I Sbjct 181 AQSAAVGQAAAAATVNQVGLSSLITDLPNAVMSLASPITSVADATGLTGIMQSIDDLLAI 240 Query 241 TFVQNAINGAVNTTAWFVMA 260 V N +NG +NT AWFVMA Sbjct 241 PMVANILNGGINTAAWFVMA 260 >gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] Length=422 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 189/422 (45%), Positives = 236/422 (56%), Gaps = 41/422 (9%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDF ALPPEINS RMY+G G+AP++AA W+GLA EL +TA++ E+VI LT + WLGP Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS SM A PYLAW+ T A A QA A+A AFEAAFAMTVPPA+VAANR L L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN+LGQNTPAI ATEA YGEMWAQDA AMYGYA SAAA L P+QT + +GLA Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 181 GQAAAVSHAAAAS--TVQQVGLGSLISNLPNAVMGFASP-LTSAADAAGLGGIIQDIEEL 237 Q+AAV+ A ++ + Q L L+S +P ++ G ASP S DA G++ + Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240 Query 238 L--------GITFVQNAING----------AVNTTAWFVMATIPNAVFLGHAFAAL---- 275 L G+ + +NG V W MA I NAV LG +A Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMADI-NAVALGAQESAAVPPM 299 Query 276 -----NPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASLGEASSVGGLSVPAGWS 330 NP+ + AA+ A P + G T +G GG ++A + +A VG +SVP W Sbjct 300 GSGEGNPSWIPAASPASPESLPVLG-EETAATLGTGG--ISAGMNQAELVGRMSVPQSWG 356 Query 331 TAAPAMTSGTTALEGSGW----AVPEEAGPVAAMPGMAGISGAAKGAGAYAGPRYGFKPI 386 A A G GW VPE A MPG+ G+ G PRYGF+P Sbjct 357 VATAVANHAGAAAPGGGWTSTAVVPEAA---VGMPGIPGMPAGIYGHNLGNAPRYGFRPT 413 Query 387 VM 388 +M Sbjct 414 IM 415 >gi|118618459|ref|YP_906791.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570569|gb|ABL05320.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=450 Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 167/359 (47%), Positives = 210/359 (59%), Gaps = 34/359 (9%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 MDF ALPPEIN RMY+G G+AP++AA W+GLA EL +TA++ E+VI LT + WLGP Sbjct 1 MDFAALPPEINPIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS SM A PYLAW+ T A A QA A+A AFEAAFAMTVPPA+VAANR L L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN+LGQNTPAI ATEA YGEMWAQDA AMYGYA SAAA L P+QT + +GLA Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 181 GQAAAVSHAAAAS--TVQQVGLGSLISNLPNAVMGFASP-LTSAADAAGLGGIIQDIEEL 237 Q+AAV+ A ++ + Q L L+S +P ++ G ASP S DA G++ + Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240 Query 238 L--------GITFVQNAING----------AVNTTAWFVMATIPNAVFLGHAFAAL---- 275 L G+ + +NG V W MA I NAV LG +A Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMADI-NAVALGAQESAAVPPM 299 Query 276 -----NPATVTAAADAVPAAAAAAGLAHTVTPVGVGGASLTASLGEASSVGGLSVPAGW 329 NP+ + AA+ A P + G T +G GG ++A + +A VG +SVP W Sbjct 300 GSGEGNPSWIPAASPASPESLPVLG-EETAATLGTGG--ISAGMNQAELVGRMSVPQSW 355 >gi|342862087|ref|ZP_08718730.1| hypothetical protein MCOL_24471 [Mycobacterium colombiense CECT 3035] gi|342130391|gb|EGT83706.1| hypothetical protein MCOL_24471 [Mycobacterium colombiense CECT 3035] Length=386 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 194/394 (50%), Positives = 239/394 (61%), Gaps = 10/394 (2%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 DFGALPPE+NS RMY GAGA P+MAA A ++ LA ELSTTA++ +S I LT E+W+GP Sbjct 3 FDFGALPPEVNSLRMYTGAGAGPMMAAAAAFSALADELSTTAAASQSAIANLTGEEWMGP 62 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 +S++M AAQPY+ W+ TA AA+QAMASAAA+EAAFAMTVPP VAANRA LA+L Sbjct 63 SSVAMATAAQPYVTWMHTTAAQLQQAASQAMASAAAYEAAFAMTVPPPLVAANRAQLASL 122 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATNVLGQNT AI ATEA YGEMWAQDA AMYGYAA+SAAA RL+PL P+ T GL Sbjct 123 VATNVLGQNTAAIAATEAQYGEMWAQDAAAMYGYAAASAAAARLSPLTDPAPTNGPGGLG 182 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Q AA + Q GL ++S++PNAV FA+P + A A ++ +LG Sbjct 183 VQTAATA-------AQTSGLRGVVSSVPNAVQSFAAPAAAPAAAPAATTAASALDSVLGD 235 Query 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGLAHTV 300 V N N + +W V TI + + H A V A G A Sbjct 236 PLVSNIGNAGFDAVSWNVFNTIVSNILYNHTLDTAAAAGVAGDVTGGIGGGALVGAAAPA 295 Query 301 TPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAVPEEAGPVAAM 360 VG A + AS+G AS VGGLS PA WS A P + + T A G+GW P E Sbjct 296 AAANVGAAPVLASVGSASPVGGLSTPAAWSAATPRVPAATVA--GTGWTAPTEEAHTTWA 353 Query 361 PGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 GM ++ A +G G GPRYG KP VMP +++V Sbjct 354 SGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLLV 386 >gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035] gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035] Length=395 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 178/407 (44%), Positives = 237/407 (59%), Gaps = 35/407 (8%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DF ALPPEINS RMY+G G+ P++AA A WN +A E+ A+S SV+ +L++E WLGP Sbjct 2 LDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLGP 61 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 +SMSM+ AA PYLAWL TA A +QA A+A A+E+AFAMTVPPA VAANRA LA L Sbjct 62 SSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANRAQLAML 121 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 VATN+ GQNTPAI ATEA Y EMWAQDA AM GYA +S+AA + PL TP N G+A Sbjct 122 VATNIFGQNTPAIAATEAQYAEMWAQDAGAMNGYATASSAAAQFTPLATPQSNTNADGVA 181 Query 181 GQAAAVSHAAAASTVQQVGLGSLISNL-----------PNAVMGFASPLTSAADAAGLGG 229 GQ AV+ V Q G++ SNL P +V + + L S +D + G Sbjct 182 GQTNAVAQ------VAQTPAGAVQSNLSSAASGSSSSSPGSVSSYLAGLLSGSDNSAFGT 235 Query 230 IIQDIEELLGITFVQNAINGAVNTTAW---FVMATIPNAVFLGHAFAALNPATVTAAADA 286 G F +NGA+ + F+++++ + HA A + A Sbjct 236 FTN------GNFFSTAVVNGALAGGPFNPQFIISSLQGVLAAQHATAL---GGLGDFAAD 286 Query 287 VPAAAAAAGLAHTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGS 346 AAA ++TV G+GGAS A +G A VG +SVP W++AA + G TA++ + Sbjct 287 ADGVAAADLASNTVGSAGLGGAS--AGVGNAHLVGSMSVPQSWASAA-NINPGQTAVQAT 343 Query 347 GWAVPEEAGPVAAMPGMAGISGAAKGAG---AYAGPRYGFKPIVMPK 390 G +AG A G G++G G G A P+YGF+P+VMP+ Sbjct 344 GVTGLTDAGAAPAAGGPGGVAGPMGGTGRRLRRAIPKYGFRPVVMPR 390 >gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478] Length=401 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 183/402 (46%), Positives = 234/402 (59%), Gaps = 22/402 (5%) Query 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 +DF LPPEINS RMY+G G+ P++AA + W LA EL TA S SV+ LT E+W GP Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64 Query 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 AS SM AA PY+AWL TA A A QA A+A A+EAAF TVPP +AANRA L AL Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124 Query 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 +ATN+LGQNTPAI ATEA Y EMWAQDA+AMYGYA SSAAA +L+P + P Q N +GLA Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184 Query 181 GQAAAVSHAAAASTVQQVG-LGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELL- 238 QAAAV+ A+A S Q L LIS +P+A+ G + P +++ +Q I +LL Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLISMVPSALQGLSGPNSTS--------WLQVIWDLLT 236 Query 239 --GITFVQNAIN-GAVNTTAWFVMAT----IPNAVFLGHAFAALNPATVTAAADAVPAAA 291 G + Q N N W + + +P + F + L A AA AAA Sbjct 237 GSGPAWWQTLWNVWGPNANVWNTITSTGLFVPGSTFAPFMASVLAGAVAADAAQDASAAA 296 Query 292 AAAGLAHTVTPV---GVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGW 348 A G P+ G G++++A LG A VG LSVP W+ AAP + +AL G+ Sbjct 297 AGVGSGLAAGPLASTGSVGSAVSAGLGNAGIVGKLSVPPAWTAAAPLHSPLGSALGGTPM 356 Query 349 AVPEEAGPVAAMPGMAGISGAAKGAGAYAGPRYGFKPIVMPK 390 P A A MPGM + A + G A P+YGF+P + + Sbjct 357 VAPPPAV-AAGMPGMPFGNMAGQPFG-RAVPQYGFRPTFVAR 396 Lambda K H 0.314 0.124 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 770431090464 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40