BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2783c Length=752 Score E Sequences producing significant alignments: (Bits) Value gi|15609920|ref|NP_217299.1| polynucleotide phosphorylase/polyad... 1498 0.0 gi|340627785|ref|YP_004746237.1| bifunctional guanosine pentapho... 1498 0.0 gi|308232239|ref|ZP_07664037.1| bifunctional polyribonucleotide ... 1498 0.0 gi|289575481|ref|ZP_06455708.1| bifunctional polyribonucleotide ... 1495 0.0 gi|289754889|ref|ZP_06514267.1| polyribonucleotide nucleotidyltr... 1494 0.0 gi|308380469|ref|ZP_07669200.1| bifunctional polyribonucleotide ... 1480 0.0 gi|240171316|ref|ZP_04749975.1| polynucleotide phosphorylase/pol... 1367 0.0 gi|2342619|emb|CAB11392.1| guanosine pentaphosphate synthetase/ ... 1353 0.0 gi|15827380|ref|NP_301643.1| polynucleotide phosphorylase/polyad... 1353 0.0 gi|183981938|ref|YP_001850229.1| bifunctional protein polyribonu... 1351 0.0 gi|187610336|sp|A0PQE7.2|PNP_MYCUA RecName: Full=Polyribonucleot... 1343 0.0 gi|41408989|ref|NP_961825.1| polynucleotide phosphorylase/polyad... 1337 0.0 gi|118617705|ref|YP_906037.1| polynucleotide phosphorylase/polya... 1330 0.0 gi|296171645|ref|ZP_06852859.1| polyribonucleotide nucleotidyltr... 1327 0.0 gi|118466887|ref|YP_882853.1| polynucleotide phosphorylase/polya... 1321 0.0 gi|254776111|ref|ZP_05217627.1| polynucleotide phosphorylase/pol... 1319 0.0 gi|333991175|ref|YP_004523789.1| bifunctional protein polyribonu... 1319 0.0 gi|342858347|ref|ZP_08715002.1| polynucleotide phosphorylase/pol... 1318 0.0 gi|254821343|ref|ZP_05226344.1| polynucleotide phosphorylase/pol... 1310 0.0 gi|118471281|ref|YP_886993.1| polynucleotide phosphorylase/polya... 1298 0.0 gi|145224603|ref|YP_001135281.1| polynucleotide phosphorylase/po... 1278 0.0 gi|108799067|ref|YP_639264.1| polynucleotide phosphorylase/polya... 1273 0.0 gi|120403341|ref|YP_953170.1| polynucleotide phosphorylase/polya... 1264 0.0 gi|169630188|ref|YP_001703837.1| polynucleotide phosphorylase/po... 1247 0.0 gi|312139341|ref|YP_004006677.1| polyribonucleotide nucleotidylt... 1221 0.0 gi|325672779|ref|ZP_08152475.1| polyribonucleotide nucleotidyltr... 1218 0.0 gi|262202098|ref|YP_003273306.1| polyribonucleotide nucleotidylt... 1213 0.0 gi|296139452|ref|YP_003646695.1| polyribonucleotide nucleotidylt... 1212 0.0 gi|111023614|ref|YP_706586.1| polynucleotide phosphorylase/polya... 1211 0.0 gi|226366103|ref|YP_002783886.1| polynucleotide phosphorylase/po... 1211 0.0 gi|343927041|ref|ZP_08766529.1| polyribonucleotide nucleotidyltr... 1209 0.0 gi|326382957|ref|ZP_08204647.1| polynucleotide phosphorylase/pol... 1202 0.0 gi|229490937|ref|ZP_04384772.1| polyribonucleotide nucleotidyltr... 1201 0.0 gi|226306131|ref|YP_002766091.1| guanosine pentaphosphate synthe... 1201 0.0 gi|333919307|ref|YP_004492888.1| polyribonucleotide nucleotidylt... 1199 0.0 gi|54025857|ref|YP_120099.1| polynucleotide phosphorylase/polyad... 1192 0.0 gi|331698425|ref|YP_004334664.1| polyribonucleotide nucleotidylt... 1159 0.0 gi|257055504|ref|YP_003133336.1| polynucleotide phosphorylase/po... 1159 0.0 gi|256379820|ref|YP_003103480.1| polynucleotide phosphorylase/po... 1157 0.0 gi|291009326|ref|ZP_06567299.1| polynucleotide phosphorylase/pol... 1157 0.0 gi|302528525|ref|ZP_07280867.1| polyribonucleotide nucleotidyltr... 1157 0.0 gi|134102361|ref|YP_001108022.1| polynucleotide phosphorylase/po... 1157 0.0 gi|300788163|ref|YP_003768454.1| polyribonucleotide nucleotidylt... 1156 0.0 gi|324998720|ref|ZP_08119832.1| polynucleotide phosphorylase/pol... 1155 0.0 gi|319950925|ref|ZP_08024802.1| polynucleotide phosphorylase/pol... 1138 0.0 gi|284992338|ref|YP_003410892.1| polyribonucleotide nucleotidylt... 1112 0.0 gi|258652431|ref|YP_003201587.1| polynucleotide phosphorylase/po... 1105 0.0 gi|329936628|ref|ZP_08286335.1| guanosine pentaphosphate synthet... 1089 0.0 gi|294631766|ref|ZP_06710326.1| polyribonucleotide nucleotidyltr... 1089 0.0 gi|256396976|ref|YP_003118540.1| polynucleotide phosphorylase/po... 1086 0.0 >gi|15609920|ref|NP_217299.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium tuberculosis H37Rv] gi|15842321|ref|NP_337358.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium tuberculosis CDC1551] gi|31793959|ref|NP_856452.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium bovis AF2122/97] 73 more sequence titles Length=752 Score = 1498 bits (3879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 752/752 (100%), Positives = 752/752 (100%), Gaps = 0/752 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK Sbjct 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD Sbjct 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI Sbjct 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ Sbjct 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG Sbjct 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI Sbjct 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP Sbjct 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE Sbjct 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 Query 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 IADIDKRGKISLILVADEDSTAAATDAATVTS Sbjct 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 >gi|340627785|ref|YP_004746237.1| bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase [Mycobacterium canettii CIPT 140010059] gi|340005975|emb|CCC45142.1| bifunctional protein polyribonucleotide nucleotidyltransferase GPSI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPASE) [Mycobacterium canettii CIPT 140010059] Length=752 Score = 1498 bits (3878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 751/752 (99%), Positives = 752/752 (100%), Gaps = 0/752 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK Sbjct 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD Sbjct 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI Sbjct 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ Sbjct 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERALVPVLPS+EEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 421 TGRVGSPKRREIGHGALAERALVPVLPSIEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG Sbjct 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI Sbjct 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP Sbjct 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE Sbjct 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 Query 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 IADIDKRGKISLILVADEDSTAAATDAATVTS Sbjct 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 >gi|308232239|ref|ZP_07664037.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu001] gi|308379315|ref|ZP_07668942.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu010] gi|308214573|gb|EFO73972.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu001] gi|308357442|gb|EFP46293.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu010] Length=831 Score = 1498 bits (3877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 752/752 (100%), Positives = 752/752 (100%), Gaps = 0/752 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK Sbjct 80 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 139 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 140 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 199 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD Sbjct 200 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 259 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI Sbjct 260 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 319 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ Sbjct 320 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 379 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 380 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 439 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 440 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 499 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 500 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 559 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG Sbjct 560 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 619 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI Sbjct 620 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 679 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP Sbjct 680 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 739 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE Sbjct 740 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 799 Query 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 IADIDKRGKISLILVADEDSTAAATDAATVTS Sbjct 800 IADIDKRGKISLILVADEDSTAAATDAATVTS 831 >gi|289575481|ref|ZP_06455708.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis K85] gi|289539912|gb|EFD44490.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis K85] Length=752 Score = 1495 bits (3871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 751/752 (99%), Positives = 751/752 (99%), Gaps = 0/752 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK Sbjct 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD Sbjct 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI Sbjct 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 AALCTAQQELADAAGKSGKPTVDF VFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ Sbjct 241 AALCTAQQELADAAGKSGKPTVDFLVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG Sbjct 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI Sbjct 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP Sbjct 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE Sbjct 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 Query 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 IADIDKRGKISLILVADEDSTAAATDAATVTS Sbjct 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 >gi|289754889|ref|ZP_06514267.1| polyribonucleotide nucleotidyltransferase [Mycobacterium tuberculosis EAS054] gi|289695476|gb|EFD62905.1| polyribonucleotide nucleotidyltransferase [Mycobacterium tuberculosis EAS054] Length=752 Score = 1494 bits (3867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 750/752 (99%), Positives = 751/752 (99%), Gaps = 0/752 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK Sbjct 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEH DFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKEHVDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 +EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD Sbjct 121 DEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI Sbjct 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ Sbjct 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG Sbjct 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI Sbjct 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP Sbjct 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE Sbjct 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 Query 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 IADIDKRGKISLILVADEDSTAAATDAATVTS Sbjct 721 IADIDKRGKISLILVADEDSTAAATDAATVTS 752 >gi|308380469|ref|ZP_07669200.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu011] gi|308361392|gb|EFP50243.1| bifunctional polyribonucleotide nucleotidyltransferase gpsI [Mycobacterium tuberculosis SUMu011] Length=743 Score = 1480 bits (3831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 742/743 (99%), Positives = 743/743 (100%), Gaps = 0/743 (0%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF Sbjct 1 MFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM Sbjct 121 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 180 Query 190 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 249 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE Sbjct 181 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 240 Query 250 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV 309 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV Sbjct 241 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV 300 Query 310 VQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH 369 VQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH Sbjct 301 VQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH 360 Query 370 GSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR 429 GSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR Sbjct 361 GSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR 420 Query 430 REIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLK 489 REIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLK Sbjct 421 REIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLK 480 Query 490 APVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQ 549 APVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQ Sbjct 481 APVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQ 540 Query 550 LDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGE 609 LDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGE Sbjct 541 LDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGE 600 Query 610 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERF 669 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERF Sbjct 601 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERF 660 Query 670 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK 729 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK Sbjct 661 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK 720 Query 730 ISLILVADEDSTAAATDAATVTS 752 ISLILVADEDSTAAATDAATVTS Sbjct 721 ISLILVADEDSTAAATDAATVTS 743 >gi|240171316|ref|ZP_04749975.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium kansasii ATCC 12478] Length=756 Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/741 (93%), Positives = 708/741 (96%), Gaps = 6/741 (0%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLALQAAGAVVAYLD++NMLLSATTASKNPKEHFDFF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDEENMLLSATTASKNPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 LSLDP DLYDVLAINAASASTQLGGLPFSGPIG VRVALIDGTWV FPTV+QI RAVFDM Sbjct 121 LSLDPNDLYDVLAINAASASTQLGGLPFSGPIGAVRVALIDGTWVAFPTVEQIGRAVFDM 180 Query 190 VVAGRIV------EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAAL 243 VVAGRIV + DVAIMMVEAEATENV++L+EGGA APTESVVA GLEAAKPFIAAL Sbjct 181 VVAGRIVGTDDAGKPDVAIMMVEAEATENVIDLLEGGAAAPTESVVAQGLEAAKPFIAAL 240 Query 244 CTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRID 303 CTAQQELADA G S DFPVFPDYG+DVYY+VSSVATDELAAALTI GKAER+QR D Sbjct 241 CTAQQELADACGASAGTAGDFPVFPDYGDDVYYAVSSVATDELAAALTIAGKAERNQRTD 300 Query 304 EIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVA 363 EIKTQV++RLADTY GREKE+GAA RALTKKLVRQRI+TDHFRIDGRGITDIRALSAEVA Sbjct 301 EIKTQVLERLADTYPGREKEIGAAFRALTKKLVRQRIVTDHFRIDGRGITDIRALSAEVA 360 Query 364 VVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGR 423 VVPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFPPFSTGETGR Sbjct 361 VVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPFSTGETGR 420 Query 424 VGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN 483 VGSPKRREIGHGALAERALVPVLP VEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN Sbjct 421 VGSPKRREIGHGALAERALVPVLPGVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN 480 Query 484 AGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKD 543 AGVPLKAPVAGIAMGLVSDDI+VEG ERRFVTLTDILGAEDAFGDMDFKVAGTKD Sbjct 481 AGVPLKAPVAGIAMGLVSDDIEVEGDDGKRTERRFVTLTDILGAEDAFGDMDFKVAGTKD 540 Query 544 FVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP 603 FVTALQLDTKLDGIPSQVLAGALEQA+DARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP Sbjct 541 FVTALQLDTKLDGIPSQVLAGALEQARDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP 600 Query 604 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP 663 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANPQLP Sbjct 601 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLP 660 Query 664 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 723 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD Sbjct 661 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 720 Query 724 IDKRGKISLILVADEDSTAAA 744 IDKRGKISL+LVA+E+S+A A Sbjct 721 IDKRGKISLVLVAEEESSANA 741 >gi|2342619|emb|CAB11392.1| guanosine pentaphosphate synthetase/ polyribonucleotide nucleotidyltransferase [Mycobacterium leprae] Length=777 Score = 1353 bits (3501), Expect = 0.0, Method: Compositional matrix adjust. Identities = 677/747 (91%), Positives = 706/747 (95%), Gaps = 11/747 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AEI+EGVFE T TIDNGSFGTR IRFETGRLALQAAGAVVAYLD DNMLLSATTASK Sbjct 5 MSVAEIEEGVFEATVTIDNGSFGTRAIRFETGRLALQAAGAVVAYLDADNMLLSATTASK 64 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKE FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 65 NPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 124 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILS+DP DLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWV FPTV+ Sbjct 125 NEIQVVVTILSVDPNDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVAFPTVE 184 Query 181 QIERAVFDMVVAGRIV----EG--DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 Q+ERAVFDMV+AGRIV EG DVAIMMVEAEATENV+ELVE GAQAPTES+VA GLE Sbjct 185 QLERAVFDMVIAGRIVGTDDEGKPDVAIMMVEAEATENVIELVECGAQAPTESIVAQGLE 244 Query 235 AAKPFIAALCTAQQELADA-AGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIG 293 AKPFIAALCTAQQELAD + + KP V++P FPDYG+DVYYSV+S+ATDELAAALTIG Sbjct 245 VAKPFIAALCTAQQELADVVSSRQAKPPVEYPTFPDYGDDVYYSVASMATDELAAALTIG 304 Query 294 GKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGIT 353 K ERDQR +EIKTQV++RLA TYEGREKE+GAA R+LTKKLVRQRILT+HFRIDGRGIT Sbjct 305 AKLERDQRTNEIKTQVLERLAGTYEGREKELGAAFRSLTKKLVRQRILTNHFRIDGRGIT 364 Query 354 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNF 413 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNF Sbjct 365 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNF 424 Query 414 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 473 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS Sbjct 425 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 484 Query 474 VCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGD 533 VCASTLALLNAGVPLKAPVAGIAMGLVSDD++ DG ERRFVTLTDILGAEDAFGD Sbjct 485 VCASTLALLNAGVPLKAPVAGIAMGLVSDDVE----FDGGTERRFVTLTDILGAEDAFGD 540 Query 534 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPY 593 MDFK AGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAIDRPDEMSPY Sbjct 541 MDFKCAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDRPDEMSPY 600 Query 594 APRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDK 653 APRV TIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDG SAQAAI+K Sbjct 601 APRVITIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGLSAQAAINK 660 Query 654 INAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 713 INAIANPQLPTVGERFLGTVVK T+FGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV Sbjct 661 INAIANPQLPTVGERFLGTVVKITEFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 720 Query 714 GDKLRVEIADIDKRGKISLILVADEDS 740 GDKLRVEIADI+KRGKISL+LVAD+DS Sbjct 721 GDKLRVEIADIEKRGKISLVLVADDDS 747 >gi|15827380|ref|NP_301643.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium leprae TN] gi|221229857|ref|YP_002503273.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium leprae Br4923] gi|81537101|sp|Q9CCF8.1|PNP_MYCLE RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|254782731|sp|B8ZQJ6.1|PNP_MYCLB RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|13092930|emb|CAC31235.1| putative polyribonucleotide phosphorylase / guanosine pentaphosphate synthetase [Mycobacterium leprae] gi|219932964|emb|CAR70949.1| putative polyribonucleotide phosphorylase / guanosine pentaphosphate synthetase [Mycobacterium leprae Br4923] Length=773 Score = 1353 bits (3501), Expect = 0.0, Method: Compositional matrix adjust. Identities = 677/747 (91%), Positives = 706/747 (95%), Gaps = 11/747 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AEI+EGVFE T TIDNGSFGTR IRFETGRLALQAAGAVVAYLD DNMLLSATTASK Sbjct 1 MSVAEIEEGVFEATVTIDNGSFGTRAIRFETGRLALQAAGAVVAYLDADNMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKE FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILS+DP DLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWV FPTV+ Sbjct 121 NEIQVVVTILSVDPNDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIV----EG--DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 Q+ERAVFDMV+AGRIV EG DVAIMMVEAEATENV+ELVE GAQAPTES+VA GLE Sbjct 181 QLERAVFDMVIAGRIVGTDDEGKPDVAIMMVEAEATENVIELVECGAQAPTESIVAQGLE 240 Query 235 AAKPFIAALCTAQQELADA-AGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIG 293 AKPFIAALCTAQQELAD + + KP V++P FPDYG+DVYYSV+S+ATDELAAALTIG Sbjct 241 VAKPFIAALCTAQQELADVVSSRQAKPPVEYPTFPDYGDDVYYSVASMATDELAAALTIG 300 Query 294 GKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGIT 353 K ERDQR +EIKTQV++RLA TYEGREKE+GAA R+LTKKLVRQRILT+HFRIDGRGIT Sbjct 301 AKLERDQRTNEIKTQVLERLAGTYEGREKELGAAFRSLTKKLVRQRILTNHFRIDGRGIT 360 Query 354 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNF 413 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNF Sbjct 361 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNF 420 Query 414 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 473 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS Sbjct 421 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 480 Query 474 VCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGD 533 VCASTLALLNAGVPLKAPVAGIAMGLVSDD++ DG ERRFVTLTDILGAEDAFGD Sbjct 481 VCASTLALLNAGVPLKAPVAGIAMGLVSDDVE----FDGGTERRFVTLTDILGAEDAFGD 536 Query 534 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPY 593 MDFK AGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAIDRPDEMSPY Sbjct 537 MDFKCAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDRPDEMSPY 596 Query 594 APRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDK 653 APRV TIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDG SAQAAI+K Sbjct 597 APRVITIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGLSAQAAINK 656 Query 654 INAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 713 INAIANPQLPTVGERFLGTVVK T+FGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV Sbjct 657 INAIANPQLPTVGERFLGTVVKITEFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 716 Query 714 GDKLRVEIADIDKRGKISLILVADEDS 740 GDKLRVEIADI+KRGKISL+LVAD+DS Sbjct 717 GDKLRVEIADIEKRGKISLVLVADDDS 743 >gi|183981938|ref|YP_001850229.1| bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium marinum M] gi|226702666|sp|B2HKV3.1|PNP_MYCMM RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|183175264|gb|ACC40374.1| bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium marinum M] Length=762 Score = 1351 bits (3497), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/743 (91%), Positives = 706/743 (96%), Gaps = 10/743 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AE +EGVFE TATIDNGSFGTRTIRFETGRLA QAAG+VVAYLDD+NMLLSATTASK Sbjct 1 MSVAETEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVAYLDDENMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV+GLR Sbjct 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILSLDP DLYDV+AINAASASTQL GLPFSGP+GGVRVALIDG WV FP V+ Sbjct 121 NEIQVVVTILSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVE 180 Query 181 QIERAVFDMVVAGRIV------EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 Q+ERAVFDMVVAGRIV DVAIMMVEAEAT+ V+ELVEGGA APTESVVA GLE Sbjct 181 QLERAVFDMVVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLE 240 Query 235 AAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGG 294 AAKPFIAALCTAQQELADA+G + K ++PVFP+YG+DVYY+VSSVATD LAAALTIGG Sbjct 241 AAKPFIAALCTAQQELADASGATAKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGG 300 Query 295 KAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITD 354 KAER+QR +EIK +V++RLADTYEGREKE+GAA R+LTKKLVRQRI+TDHFRIDGRGITD Sbjct 301 KAERNQRTEEIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGITD 360 Query 355 IRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFP 414 IRALSAEVA+VPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFP Sbjct 361 IRALSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFP 420 Query 415 PFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 474 PFSTGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEALGSNGSTSMGSV Sbjct 421 PFSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 480 Query 475 CASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDM 534 CASTLALLNAGVPLKAPVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDM Sbjct 481 CASTLALLNAGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDM 536 Query 535 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYA 594 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYA Sbjct 537 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYA 596 Query 595 PRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 654 PRVTTIKVPVDKIGEVIGPKGKVIN+ITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI Sbjct 597 PRVTTIKVPVDKIGEVIGPKGKVINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 656 Query 655 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 714 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG Sbjct 657 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 716 Query 715 DKLRVEIADIDKRGKISLILVAD 737 DKLRVEIADIDKRGKISL+LVA+ Sbjct 717 DKLRVEIADIDKRGKISLVLVAE 739 >gi|187610336|sp|A0PQE7.2|PNP_MYCUA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase Length=762 Score = 1343 bits (3475), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/743 (90%), Positives = 704/743 (95%), Gaps = 10/743 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AE +EGVFE TATIDNGSFGTRTIRFETGRLA QAAG+VV YLDD+NMLLSATTASK Sbjct 1 MSVAETEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVGYLDDENMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHF+FFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV+GLR Sbjct 61 NPKEHFNFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILSLDP DLYDV+AINAASASTQL GLPFSGP+GGVRVALIDG WV FP V+ Sbjct 121 NEIQVVVTILSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVE 180 Query 181 QIERAVFDMVVAGRIV------EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 Q+ERAVFDMVVAGRIV DVAIMMVEAEAT+ V+ELVEGGA APTESVVA GLE Sbjct 181 QLERAVFDMVVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLE 240 Query 235 AAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGG 294 AAKPFIAALCTAQQELADA+G + K ++PVFP+YG+DVYY+VSSVATD LAAALTIGG Sbjct 241 AAKPFIAALCTAQQELADASGATVKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGG 300 Query 295 KAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITD 354 KAER+QR +EIK +V++RLADTYEGREKE+GAA R+LTKKLVRQRI+TDHFRIDGRG+TD Sbjct 301 KAERNQRTEEIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGVTD 360 Query 355 IRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFP 414 IRALSAEVA+VPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFP Sbjct 361 IRALSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFP 420 Query 415 PFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 474 PFSTGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEALGSNGSTSMGSV Sbjct 421 PFSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 480 Query 475 CASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDM 534 CASTLALLNAGVPLKAPVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDM Sbjct 481 CASTLALLNAGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDM 536 Query 535 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYA 594 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYA Sbjct 537 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYA 596 Query 595 PRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 654 PRVTTIKVPVDKIGEVIGPKGKVIN+ITEET AQISIEDDGTVFVGATDGPSAQAAIDKI Sbjct 597 PRVTTIKVPVDKIGEVIGPKGKVINSITEETRAQISIEDDGTVFVGATDGPSAQAAIDKI 656 Query 655 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 714 NAIANPQLPTVGERFLGTVVKTTDFGAFV+LLPGRDGLVHISKLGKGKRIAKVEDVVNVG Sbjct 657 NAIANPQLPTVGERFLGTVVKTTDFGAFVALLPGRDGLVHISKLGKGKRIAKVEDVVNVG 716 Query 715 DKLRVEIADIDKRGKISLILVAD 737 DKLRVEIADIDKRGKISL+LVA+ Sbjct 717 DKLRVEIADIDKRGKISLVLVAE 739 >gi|41408989|ref|NP_961825.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81413535|sp|Q73VX0.1|PNP_MYCPA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|41397348|gb|AAS05208.1| GpsI [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458954|gb|EGO37908.1| polyribonucleotide nucleotidyltransferase [Mycobacterium avium subsp. paratuberculosis S397] Length=757 Score = 1337 bits (3459), Expect = 0.0, Method: Compositional matrix adjust. Identities = 675/746 (91%), Positives = 711/746 (96%), Gaps = 10/746 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AEI+EGVFE TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK Sbjct 1 MSVAEIEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 +PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 SPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILSLDP DLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWV FPTV+ Sbjct 121 NEIQVVVTILSLDPNDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIVEG----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAA 236 Q+ERAVFDMVVAGR V+G DVAIMMVEAEAT NV+EL++GGAQAPTE+VVA GLEAA Sbjct 181 QLERAVFDMVVAGRKVDGADGPDVAIMMVEAEATSNVIELIDGGAQAPTETVVAQGLEAA 240 Query 237 KPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKA 296 KPFI LCTAQQELAD K+ +PT D+P FPDYG+DVYYSV+SVATDEL+ ALTIGGKA Sbjct 241 KPFIEVLCTAQQELAD---KAARPTSDYPTFPDYGDDVYYSVASVATDELSKALTIGGKA 297 Query 297 ERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIR 356 ERD R DE+K +V+ RLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIR Sbjct 298 ERDARTDELKAEVLARLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIR 357 Query 357 ALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPF 416 ALSAEVAVVPRAHGSALF+RGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFPPF Sbjct 358 ALSAEVAVVPRAHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPF 417 Query 417 STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCA 476 STGETGRVGSPKRREIGHGALAERALVPVLPS+E+FPYAIRQVSEALGSNGSTSMGSVCA Sbjct 418 STGETGRVGSPKRREIGHGALAERALVPVLPSLEDFPYAIRQVSEALGSNGSTSMGSVCA 477 Query 477 STLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGV--VERRFVTLTDILGAEDAFGDM 534 STLALLNAGVPLKAPVAGIAMGLVSDDI+VE A DG +ERRFVTLTDILGAEDAFGDM Sbjct 478 STLALLNAGVPLKAPVAGIAMGLVSDDIEVE-AGDGTKSLERRFVTLTDILGAEDAFGDM 536 Query 535 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYA 594 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYA Sbjct 537 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILEVMAEAIDEPDEMSPYA 596 Query 595 PRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 654 PRVTTI+VPVDKIGEVIGPKGK+INAITEETGAQISIEDDGTVFVGATDGPSAQAAID+I Sbjct 597 PRVTTIRVPVDKIGEVIGPKGKIINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRI 656 Query 655 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 714 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG Sbjct 657 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 716 Query 715 DKLRVEIADIDKRGKISLILVADEDS 740 DKLRVEIADIDKRGKISL+LV +++S Sbjct 717 DKLRVEIADIDKRGKISLVLVEEDNS 742 >gi|118617705|ref|YP_906037.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium ulcerans Agy99] gi|118569815|gb|ABL04566.1| bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium ulcerans Agy99] Length=753 Score = 1330 bits (3441), Expect = 0.0, Method: Compositional matrix adjust. Identities = 659/734 (90%), Positives = 697/734 (95%), Gaps = 10/734 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLA QAAG+VV YLDD+NMLLSATTASKNPKEHF+FF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVGYLDDENMLLSATTASKNPKEHFNFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV+GLRNEIQ+VVTI Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLRNEIQVVVTI 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 LSLDP DLYDV+AINAASASTQL GLPFSGP+GGVRVALIDG WV FP V+Q+ERAVFDM Sbjct 121 LSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVEQLERAVFDM 180 Query 190 VVAGRIV------EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAAL 243 VVAGRIV DVAIMMVEAEAT+ V+ELVEGGA APTESVVA GLEAAKPFIAAL Sbjct 181 VVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLEAAKPFIAAL 240 Query 244 CTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRID 303 CTAQQELADA+G + K ++PVFP+YG+DVYY+VSSVATD LAAALTIGGKAER+QR + Sbjct 241 CTAQQELADASGATVKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGGKAERNQRTE 300 Query 304 EIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVA 363 EIK +V++RLADTYEGREKE+GAA R+LTKKLVRQRI+TDHFRIDGRG+TDIRALSAEVA Sbjct 301 EIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGVTDIRALSAEVA 360 Query 364 VVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGR 423 +VPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFPPFSTGETGR Sbjct 361 LVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPFSTGETGR 420 Query 424 VGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN 483 VGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN Sbjct 421 VGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLN 480 Query 484 AGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKD 543 AGVPLKAPVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDMDFKVAGTKD Sbjct 481 AGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDMDFKVAGTKD 536 Query 544 FVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP 603 FVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAPRVTTIKVP Sbjct 537 FVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYAPRVTTIKVP 596 Query 604 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP 663 VDKIGEVIGPKGKVIN+ITEET AQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP Sbjct 597 VDKIGEVIGPKGKVINSITEETRAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP 656 Query 664 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 723 TVGERFLGTVVKTTDFGAFV+LLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD Sbjct 657 TVGERFLGTVVKTTDFGAFVALLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 716 Query 724 IDKRGKISLILVAD 737 IDKRGKISL+LVA+ Sbjct 717 IDKRGKISLVLVAE 730 >gi|296171645|ref|ZP_06852859.1| polyribonucleotide nucleotidyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894006|gb|EFG73769.1| polyribonucleotide nucleotidyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=751 Score = 1327 bits (3435), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/737 (91%), Positives = 697/737 (95%), Gaps = 7/737 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS AEI+EGVFE TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK Sbjct 1 MSVAEIEEGVFEATAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV GLR Sbjct 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVTILSLDP DLYDVLAINAASASTQ+ GLPFSGPIGGVRVALIDGTWV FPTV+ Sbjct 121 NEIQVVVTILSLDPNDLYDVLAINAASASTQISGLPFSGPIGGVRVALIDGTWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Q+ERAVFDMVVAGR V+ DVAIMMVEAEAT+ V+ELVEGGAQAPTE+VVA GLEAAKPFI Sbjct 181 QLERAVFDMVVAGRKVDDDVAIMMVEAEATDKVIELVEGGAQAPTETVVAEGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 LCTAQQELADAA KP ++P FPDY EDVYYSV++VATDELA ALTIGGKAERD Sbjct 241 NVLCTAQQELADAA---AKPVGEYPTFPDYQEDVYYSVAAVATDELAKALTIGGKAERDA 297 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 R DE+K +V+ RLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIRALSA Sbjct 298 RTDELKAEVLTRLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSA 357 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVAVVPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPPFSTGE Sbjct 358 EVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 417 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERAL+PVLP VEEFPYAIRQVSEALGSNGSTSMGSVCASTLA Sbjct 418 TGRVGSPKRREIGHGALAERALLPVLPGVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 477 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDMDFK AG Sbjct 478 LLNAGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDMDFKCAG 533 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAPRVTTI Sbjct 534 TKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTI 593 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGK+INAITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANP Sbjct 594 KVPVDKIGEVIGPKGKIINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANP 653 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLG+GKRIAKVEDVVNVGDKLRVE Sbjct 654 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVVNVGDKLRVE 713 Query 721 IADIDKRGKISLILVAD 737 IADIDKRGKISL+LV + Sbjct 714 IADIDKRGKISLVLVEE 730 >gi|118466887|ref|YP_882853.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium avium 104] gi|187610285|sp|A0QIW5.1|PNP_MYCA1 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|118168174|gb|ABK69071.1| guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase [Mycobacterium avium 104] Length=748 Score = 1321 bits (3420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 667/737 (91%), Positives = 703/737 (96%), Gaps = 10/737 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK+PKEHFDFF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASKSPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ+VVTI Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQVVVTI 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 LSLDP DLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWV FPTV+Q+ERAVFDM Sbjct 121 LSLDPNDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVAFPTVEQLERAVFDM 180 Query 190 VVAGRIVEG----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCT 245 VVAGR V+G DVAIMMVEAEAT NV+EL++GGAQAPTE+VVA GLEAAKPFI LCT Sbjct 181 VVAGRKVDGADGPDVAIMMVEAEATSNVIELIDGGAQAPTETVVAQGLEAAKPFIEVLCT 240 Query 246 AQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEI 305 AQQELAD K+ +PT D+P FPDYG+DVYYSV+SVATDEL+ ALTIGGKAERD R DE+ Sbjct 241 AQQELAD---KAARPTSDYPTFPDYGDDVYYSVASVATDELSKALTIGGKAERDARTDEL 297 Query 306 KTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 365 K +V+ RLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV Sbjct 298 KAEVLARLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 357 Query 366 PRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVG 425 PRAHGSALF+RGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFPPFSTGETGRVG Sbjct 358 PRAHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPFSTGETGRVG 417 Query 426 SPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 485 SPKRREIGHGALAERALVPVLPS+E+FPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG Sbjct 418 SPKRREIGHGALAERALVPVLPSLEDFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 477 Query 486 VPLKAPVAGIAMGLVSDDIQVEGAVDGV--VERRFVTLTDILGAEDAFGDMDFKVAGTKD 543 VPLKAPVAGIAMGLVSDDI+VE A DG +ERRFVTLTDILGAEDAFGDMDFKVAGTKD Sbjct 478 VPLKAPVAGIAMGLVSDDIEVE-AGDGTKSLERRFVTLTDILGAEDAFGDMDFKVAGTKD 536 Query 544 FVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP 603 FVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAPRVTTI+VP Sbjct 537 FVTALQLDTKLDGIPSQVLAGALSQAKDARLTILEVMAEAIDEPDEMSPYAPRVTTIRVP 596 Query 604 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP 663 VDKIGEVIGPKGK+INAITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANPQLP Sbjct 597 VDKIGEVIGPKGKIINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLP 656 Query 664 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 723 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD Sbjct 657 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 716 Query 724 IDKRGKISLILVADEDS 740 IDKRGKISL+LV +++S Sbjct 717 IDKRGKISLVLVEEDNS 733 >gi|254776111|ref|ZP_05217627.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium avium subsp. avium ATCC 25291] Length=748 Score = 1319 bits (3414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/737 (91%), Positives = 702/737 (96%), Gaps = 10/737 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK+PKEHFDFF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASKSPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ+VVTI Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQVVVTI 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 LSLDP DLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWV FPTV+Q+ERAVFDM Sbjct 121 LSLDPNDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVAFPTVEQLERAVFDM 180 Query 190 VVAGRIVEG----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCT 245 VVAGR V+G DVAIMMVEAEAT NV+EL++GGAQAPTE+VVA GLEAAKPFI LCT Sbjct 181 VVAGRKVDGADGPDVAIMMVEAEATSNVIELIDGGAQAPTETVVAQGLEAAKPFIEVLCT 240 Query 246 AQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEI 305 AQQELAD K+ +PT D+P FPDYG+DVYYSV+SVATDEL+ ALTIGGKAERD R DE+ Sbjct 241 AQQELAD---KAARPTSDYPTFPDYGDDVYYSVASVATDELSKALTIGGKAERDARTDEL 297 Query 306 KTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 365 K +V+ RLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV Sbjct 298 KAEVLARLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 357 Query 366 PRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVG 425 PRAHGSALF+RGETQILGVTTLDM+KMAQQIDSLGPET+KRYMHHYNFPPFSTGETGRVG Sbjct 358 PRAHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPFSTGETGRVG 417 Query 426 SPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 485 SPKRREIGHGALAERALVPVLPS+E+FPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG Sbjct 418 SPKRREIGHGALAERALVPVLPSLEDFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 477 Query 486 VPLKAPVAGIAMGLVSDDIQVEGAVDGV--VERRFVTLTDILGAEDAFGDMDFKVAGTKD 543 VPLKAPVAGIAMGLVSDDI+VE A DG +ERRFVTLTDILGAEDAFGDMDFKVAGTKD Sbjct 478 VPLKAPVAGIAMGLVSDDIEVE-AGDGTKSLERRFVTLTDILGAEDAFGDMDFKVAGTKD 536 Query 544 FVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVP 603 FVTALQLDTKLDGIPSQVLAGAL QAKDARL ILEVMAEAID PDEMSPYAPRVTTI+VP Sbjct 537 FVTALQLDTKLDGIPSQVLAGALSQAKDARLIILEVMAEAIDEPDEMSPYAPRVTTIRVP 596 Query 604 VDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP 663 VDKIGEVIGPKGK+INAITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANPQLP Sbjct 597 VDKIGEVIGPKGKIINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLP 656 Query 664 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 723 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD Sbjct 657 TVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIAD 716 Query 724 IDKRGKISLILVADEDS 740 IDKRGKISL+LV +++S Sbjct 717 IDKRGKISLVLVEEDNS 733 >gi|333991175|ref|YP_004523789.1| bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium sp. JDM601] gi|333487143|gb|AEF36535.1| bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium sp. JDM601] Length=757 Score = 1319 bits (3413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/747 (88%), Positives = 695/747 (94%), Gaps = 12/747 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MSA EI+EGVFE+TAT+DNGSFGTRTIRFETGRLA QAAG+VVAYLDD+ MLLSATTASK Sbjct 1 MSAIEIEEGVFESTATLDNGSFGTRTIRFETGRLAQQAAGSVVAYLDDETMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 PK+HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRL DRPLRPSFV+GLR Sbjct 61 APKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLTDRPLRPSFVEGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NE+Q+VVT+LSLDP DLYDV+AINAASASTQL GLPFSGP+G RVALIDG+WV FPT++ Sbjct 121 NEVQVVVTVLSLDPKDLYDVVAINAASASTQLAGLPFSGPVGAARVALIDGSWVAFPTIE 180 Query 181 QIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEA 235 Q+ERA FDMV+AGR VE DVAIMMVEAEAT+NV+EL+E GAQAPTE+VVA GLEA Sbjct 181 QLERATFDMVLAGRAVEATGGGTDVAIMMVEAEATDNVIELIEAGAQAPTEAVVAEGLEA 240 Query 236 AKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGK 295 AKPFIAALC AQQELADAA + PT ++P+FP YG+DVYYSV+SVATDELA ALTI GK Sbjct 241 AKPFIAALCKAQQELADAAAR---PTAEYPLFPPYGDDVYYSVASVATDELAKALTIAGK 297 Query 296 AERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDI 355 AERD+R +EIK +VV RLA+TYEGREKE+ AA R+LTKKLVRQRILTDHFRIDGRGITDI Sbjct 298 AERDERTEEIKAEVVARLAETYEGREKEISAAYRSLTKKLVRQRILTDHFRIDGRGITDI 357 Query 356 RALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPP 415 RALSAEVAV+PRAHGSALFERGETQI+GVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPP Sbjct 358 RALSAEVAVIPRAHGSALFERGETQIMGVTTLDMMKMAQQIDSLGPETSKRYMHHYNFPP 417 Query 416 FSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVC 475 +STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEAL SNGSTSMGSVC Sbjct 418 YSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVC 477 Query 476 ASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMD 535 ASTLALLNAGVPLKAPVAGIAMGLVSDD++ VDG ERRFV LTDILGAEDAFGDMD Sbjct 478 ASTLALLNAGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVALTDILGAEDAFGDMD 533 Query 536 FKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAP 595 FKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAP Sbjct 534 FKVAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDAPDEMSPYAP 593 Query 596 RVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKIN 655 RVTTIKVPVDKIGEVIGPKGK+IN+ITEETGAQISIEDDGTVFVGATDGPSAQAAIDKIN Sbjct 594 RVTTIKVPVDKIGEVIGPKGKMINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKIN 653 Query 656 AIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGD 715 AIANPQLP +GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKR+AKVEDVV VGD Sbjct 654 AIANPQLPKIGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRVAKVEDVVKVGD 713 Query 716 KLRVEIADIDKRGKISLILVADEDSTA 742 KLRVEIADID RGKISL+ V D +A Sbjct 714 KLRVEIADIDNRGKISLVPVEDSAESA 740 >gi|342858347|ref|ZP_08715002.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium colombiense CECT 3035] gi|342134051|gb|EGT87231.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium colombiense CECT 3035] Length=742 Score = 1318 bits (3411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/730 (91%), Positives = 692/730 (95%), Gaps = 7/730 (0%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK+PKEHFDFF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASKSPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV GLRNEIQ+VVT+ Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLRNEIQVVVTV 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 +SLDP DLYDVLAINAASASTQL GLPFSGPIGGVRVALIDG WV FPTV+Q+ERAVFDM Sbjct 121 MSLDPNDLYDVLAINAASASTQLSGLPFSGPIGGVRVALIDGQWVAFPTVEQLERAVFDM 180 Query 190 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 249 VVAGR VEGDVAIMMVEAEATE V+ELVEGGAQAPTE+VVA GLEAAKPFIAALC AQ+E Sbjct 181 VVAGRKVEGDVAIMMVEAEATEKVIELVEGGAQAPTETVVAEGLEAAKPFIAALCAAQEE 240 Query 250 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV 309 LA AA K P +FP FPDY EDVYYSV+SVATDELA ALTIGGKAERD R DE+K +V Sbjct 241 LAGAAAK---PVGEFPTFPDYQEDVYYSVASVATDELAKALTIGGKAERDARTDELKAEV 297 Query 310 VQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH 369 QRLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH Sbjct 298 AQRLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH 357 Query 370 GSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR 429 GSALF+RGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR Sbjct 358 GSALFQRGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR 417 Query 430 REIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLK 489 REIGHGALAERAL+PVLP VEEFPYAIRQVSEALGSNGSTSMGSVCASTL+LLNAGVPLK Sbjct 418 REIGHGALAERALIPVLPGVEEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLK 477 Query 490 APVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQ 549 APVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDMDFK AGTKDFVTALQ Sbjct 478 APVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDMDFKCAGTKDFVTALQ 533 Query 550 LDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGE 609 LDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAPRVTTIKVPVDKIGE Sbjct 534 LDTKLDGIPSQVLAGALGQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKVPVDKIGE 593 Query 610 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERF 669 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANPQLPTVGERF Sbjct 594 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLPTVGERF 653 Query 670 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK 729 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK Sbjct 654 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK 713 Query 730 ISLILVADED 739 ISL+LV +++ Sbjct 714 ISLVLVEEDN 723 >gi|254821343|ref|ZP_05226344.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium intracellulare ATCC 13950] Length=744 Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/736 (90%), Positives = 693/736 (95%), Gaps = 12/736 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+NMLLSATTASK+PKEHFDFF Sbjct 1 MFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASKSPKEHFDFF 60 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV GLRNEIQ+VVT+ Sbjct 61 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLRNEIQVVVTV 120 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 +SLDP DLYDVLAINAASASTQL GLPFSGPIGGVRVALIDG WV FPTV+Q+ERAVFDM Sbjct 121 MSLDPNDLYDVLAINAASASTQLSGLPFSGPIGGVRVALIDGQWVAFPTVEQLERAVFDM 180 Query 190 VVAGRIV-----EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALC 244 VVAGRIV E D+AIMMVEAEATENV+ELVEGGAQAPTE+VVA GLEAAKPFIA LC Sbjct 181 VVAGRIVGGGAAEKDIAIMMVEAEATENVIELVEGGAQAPTETVVAEGLEAAKPFIATLC 240 Query 245 TAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDE 304 TAQ+ELA AA K P +FP FPDY EDVYYSV+SVATDELA ALTIGGKAERD R DE Sbjct 241 TAQEELAGAAAK---PVGEFPTFPDYQEDVYYSVASVATDELAKALTIGGKAERDARTDE 297 Query 305 IKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV 364 +K +V+ RLA+TYEGREKEV AA R+LTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV Sbjct 298 LKAEVLARLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV 357 Query 365 VPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV 424 VPRAHGSALF+RGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV Sbjct 358 VPRAHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV 417 Query 425 GSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNA 484 GSPKRREIGHGALAERAL+PVLP VE+FPYAIRQVSEALGSNGSTSMGSVCASTL+LLNA Sbjct 418 GSPKRREIGHGALAERALIPVLPGVEDFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNA 477 Query 485 GVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDF 544 GVPLKAPVAGIAMGLVSDD++ +DG ERRFVTLTDILGAEDAFGDMDFK AGTKDF Sbjct 478 GVPLKAPVAGIAMGLVSDDVE----IDGRTERRFVTLTDILGAEDAFGDMDFKCAGTKDF 533 Query 545 VTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPV 604 VTALQLDTKLDGIPSQVLAGAL QAKDARLTILEVMAEAID PDEMSPYAPRVTTIKVPV Sbjct 534 VTALQLDTKLDGIPSQVLAGALGQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKVPV 593 Query 605 DKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPT 664 DKIGEVIGPKGKVIN ITEETGAQISIEDDGTVFVGATDGPSAQAAID+INAIANPQLPT Sbjct 594 DKIGEVIGPKGKVINGITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLPT 653 Query 665 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI 724 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI Sbjct 654 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI 713 Query 725 DKRGKISLILVADEDS 740 DKRGKISL+LV D++S Sbjct 714 DKRGKISLVLVEDDNS 729 >gi|118471281|ref|YP_886993.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium smegmatis str. MC2 155] gi|187610287|sp|A0QVQ5.1|PNP_MYCS2 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|118172568|gb|ABK73464.1| guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase [Mycobacterium smegmatis str. MC2 155] Length=763 Score = 1298 bits (3358), Expect = 0.0, Method: Compositional matrix adjust. Identities = 643/739 (88%), Positives = 685/739 (93%), Gaps = 11/739 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS E+++GV+E+TA IDNGSFGTRTIRFETGRLA QAAG+ VAYLDD+ MLLSATTASK Sbjct 1 MSVVELEDGVYESTAVIDNGSFGTRTIRFETGRLAQQAAGSAVAYLDDETMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 NPK+HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR Sbjct 61 NPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVT++SLDP DLYDVLAINAAS STQL GLPFSGP+GG R+ALIDGTWV FPTV+ Sbjct 121 NEIQVVVTVMSLDPKDLYDVLAINAASMSTQLAGLPFSGPVGGARIALIDGTWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIV----EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAA 236 Q+ERAVFDMVVAGRIV DVAIMMVEAEATENVVELV GGAQAPTE+VVA GLEAA Sbjct 181 QLERAVFDMVVAGRIVGDGDSADVAIMMVEAEATENVVELVAGGAQAPTEAVVAEGLEAA 240 Query 237 KPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKA 296 KPFI ALC AQQELAD ++ KP ++PVFPDY DVY +V+SVAT+ LA ALTI GK Sbjct 241 KPFIKALCAAQQELAD---RAAKPAGEYPVFPDYEADVYDAVASVATEALAEALTIAGKT 297 Query 297 ERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIR 356 ER+ R DEIK +V++RLA+ Y GREKE+GAA R+LTKKLVRQRILTDHFRIDGRGITDIR Sbjct 298 ERNDRTDEIKVEVLERLAEPYAGREKEIGAAFRSLTKKLVRQRILTDHFRIDGRGITDIR 357 Query 357 ALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPF 416 ALSAEVAV+PRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPE +KRYMHHYNFPP+ Sbjct 358 ALSAEVAVIPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPENTKRYMHHYNFPPY 417 Query 417 STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCA 476 STGETGRVGSPKRREIGHGALAERALVPVLPS+EEFPYAIRQVSEALGSNGSTSMGSVCA Sbjct 418 STGETGRVGSPKRREIGHGALAERALVPVLPSIEEFPYAIRQVSEALGSNGSTSMGSVCA 477 Query 477 STLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDF 536 STLALLNAGVPLKAPVAGIAMGLVSDD+ VDG VE+R+V LTDILGAEDAFGDMDF Sbjct 478 STLALLNAGVPLKAPVAGIAMGLVSDDVD----VDGKVEKRYVALTDILGAEDAFGDMDF 533 Query 537 KVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPR 596 KVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTIL+VMAEAIDRPDEMSPYAPR Sbjct 534 KVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDRPDEMSPYAPR 593 Query 597 VTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINA 656 +TTIKVPVDKIGEVIGPKGK+IN+ITEETGAQISIEDDGTVFVGA DG SAQAAIDKINA Sbjct 594 ITTIKVPVDKIGEVIGPKGKMINSITEETGAQISIEDDGTVFVGAADGLSAQAAIDKINA 653 Query 657 IANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDK 716 IANPQLP VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVV VGDK Sbjct 654 IANPQLPKVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKVGDK 713 Query 717 LRVEIADIDKRGKISLILV 735 LRVEIADID RGKISL+LV Sbjct 714 LRVEIADIDNRGKISLVLV 732 >gi|145224603|ref|YP_001135281.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium gilvum PYR-GCK] gi|315444934|ref|YP_004077813.1| guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [Mycobacterium sp. Spyr1] gi|189037310|sp|A4TCH6.1|PNP_MYCGI RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|145217089|gb|ABP46493.1| Polyribonucleotide nucleotidyltransferase [Mycobacterium gilvum PYR-GCK] gi|315263237|gb|ADT99978.1| guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [Mycobacterium sp. Spyr1] Length=756 Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/743 (86%), Positives = 686/743 (93%), Gaps = 10/743 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS EI+EGVFE+TATIDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSATTASK Sbjct 1 MSVVEIEEGVFESTATIDNGSFGTRTIRFETGRLARQAAGAVVAYLDDETMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 PKEHFDFFPLT+DVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRP+F+ GLR Sbjct 61 QPKEHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFISGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVT+LSLDP DLYDVLAINAASASTQ+ G+PF+GP+GGVRVALIDG WV FPTV+ Sbjct 121 NEIQVVVTVLSLDPKDLYDVLAINAASASTQISGIPFNGPVGGVRVALIDGQWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIV----EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAA 236 Q+E+AVFDMVVAGR V DVAIMMVEAEAT+ V+ELV GGA APTE+VVA GLEAA Sbjct 181 QLEKAVFDMVVAGRKVGDAGNEDVAIMMVEAEATDKVIELVAGGAGAPTEAVVAEGLEAA 240 Query 237 KPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKA 296 KPFIAALC AQ LA AAGK T ++PVFPDY EDVYYSV+SVATD L+ ALTI GK Sbjct 241 KPFIAALCDAQAALAGAAGKE---TAEYPVFPDYAEDVYYSVASVATDALSEALTIAGKE 297 Query 297 ERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIR 356 RD R +EIK +VV+RLA+ Y GREKE+GAA R+LTKKLVRQRILTDHFRIDGRG+TDIR Sbjct 298 ARDDRTNEIKAEVVERLAEQYAGREKEIGAAYRSLTKKLVRQRILTDHFRIDGRGVTDIR 357 Query 357 ALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPF 416 ALSAEVAV+PRAHGSALFERGETQI+GVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPP+ Sbjct 358 ALSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPY 417 Query 417 STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCA 476 STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTSMGSVCA Sbjct 418 STGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCA 477 Query 477 STLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDF 536 STL+LLNAGVPLKAPVAGIAMGLVSDD++VEG G VERRFVTLTDILGAEDAFGDMDF Sbjct 478 STLSLLNAGVPLKAPVAGIAMGLVSDDVEVEG---GGVERRFVTLTDILGAEDAFGDMDF 534 Query 537 KVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPR 596 K AGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDAR+TILEVMAEAID PDEMSPYAPR Sbjct 535 KCAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARITILEVMAEAIDEPDEMSPYAPR 594 Query 597 VTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINA 656 +TTIKVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTVFVGA++G +AQAAIDKINA Sbjct 595 ITTIKVPVDKIGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINA 654 Query 657 IANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDK 716 IANPQLP VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLG+GKRI KVEDV VGDK Sbjct 655 IANPQLPKVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRINKVEDVAKVGDK 714 Query 717 LRVEIADIDKRGKISLILVADED 739 LRVEIADID RGKISL+LVA+E+ Sbjct 715 LRVEIADIDNRGKISLVLVAEEE 737 >gi|108799067|ref|YP_639264.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium sp. MCS] gi|119868182|ref|YP_938134.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium sp. KMS] gi|126434670|ref|YP_001070361.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium sp. JLS] 6 more sequence titles Length=759 Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/735 (86%), Positives = 683/735 (93%), Gaps = 7/735 (0%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS EI++GV+E+TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK Sbjct 1 MSVVEIEDGVYESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATSASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 +PK+HFDFFPLT+DVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRP+FV GLR Sbjct 61 SPKDHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVSGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVT++SLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALIDGTWV FPTV+ Sbjct 121 NEIQVVVTVMSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIDGTWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Q+ERAVFDMVVAGR DVAIMMVEAEAT+ VVELV GGAQAPTE+VVA GLEAAKPFI Sbjct 181 QLERAVFDMVVAGRKTADDVAIMMVEAEATDKVVELVAGGAQAPTEAVVAEGLEAAKPFI 240 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 LC AQQELA G++ KPT D+P+FP+YGEDVYY+V+SVATD L+ ALTI GK ER+ Sbjct 241 KVLCEAQQELA---GRAAKPTADYPLFPEYGEDVYYAVASVATDALSEALTIAGKEERNN 297 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 R DEIK +V+ RLAD + GREKE+G A R+LTKKLVRQRILTDHFRIDGRG+TDIRALSA Sbjct 298 RTDEIKVEVLGRLADQFAGREKEIGGAFRSLTKKLVRQRILTDHFRIDGRGVTDIRALSA 357 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EVA+VPRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPP+STGE Sbjct 358 EVAIVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYSTGE 417 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTSMGSVCASTL+ Sbjct 418 TGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCASTLS 477 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSDD++ VDG ERRFVTLTDILGAEDAFGDMDFK AG Sbjct 478 LLNAGVPLKAPVAGIAMGLVSDDVE----VDGKTERRFVTLTDILGAEDAFGDMDFKCAG 533 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPSQVLAGAL QAKDAR+TILEVMAEAID PDEMSPYAPR+TTI Sbjct 534 TKDFVTALQLDTKLDGIPSQVLAGALAQAKDARITILEVMAEAIDAPDEMSPYAPRITTI 593 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTVFVGA++G +AQAAIDKINAIANP Sbjct 594 KVPVDKIGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAIANP 653 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLP +GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLG+GKRIAKVEDV VGDKLRVE Sbjct 654 QLPKIGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVAKVGDKLRVE 713 Query 721 IADIDKRGKISLILV 735 IADID RGKISL+LV Sbjct 714 IADIDNRGKISLVLV 728 >gi|120403341|ref|YP_953170.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium vanbaalenii PYR-1] gi|187610302|sp|A1T7L4.1|PNP_MYCVP RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|119956159|gb|ABM13164.1| Polyribonucleotide nucleotidyltransferase [Mycobacterium vanbaalenii PYR-1] Length=754 Score = 1264 bits (3270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 642/744 (87%), Positives = 686/744 (93%), Gaps = 10/744 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS EI++GVFE+TATIDNGSFGTRTIRFE GRLA QAAGAVVAYLDD+ MLLSATTASK Sbjct 1 MSVVEIEDGVFESTATIDNGSFGTRTIRFEAGRLAQQAAGAVVAYLDDETMLLSATTASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 +PKEHFDFFPLT+DVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV GLR Sbjct 61 SPKEHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVT+LSLDP DLYDVLAINAASASTQ+ GLPFSGP+GGVRVALIDG WV FPTV+ Sbjct 121 NEIQVVVTVLSLDPKDLYDVLAINAASASTQISGLPFSGPVGGVRVALIDGQWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIV---EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAK 237 Q+ERAVFDMVVAGR V DVAIMMVEAEATENV+ELV GGA APTE+VVA GLEAAK Sbjct 181 QLERAVFDMVVAGRKVGDDHKDVAIMMVEAEATENVIELVAGGAGAPTETVVAEGLEAAK 240 Query 238 PFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAE 297 PFIA LC AQ LA AAGK T ++P+FPDYG+DVYYSV+SVAT+ L+ ALTI GK E Sbjct 241 PFIAVLCDAQAALAGAAGKE---TAEYPLFPDYGDDVYYSVASVATEALSEALTIAGKNE 297 Query 298 RDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRA 357 R+ R DEIK +V+ RLA+ Y GREKE+GAA R+LTKKLVRQRILTDHFRIDGRG+TDIRA Sbjct 298 RNDRTDEIKVEVLNRLAEQYAGREKEIGAAYRSLTKKLVRQRILTDHFRIDGRGVTDIRA 357 Query 358 LSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFS 417 LSAEVAVVPRAHGSALFERGETQI+GVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPP+S Sbjct 358 LSAEVAVVPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYS 417 Query 418 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS 477 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS Sbjct 418 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS 477 Query 478 TLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFK 537 TL+LLNAGVPLKAPVAGIAMGLVSDDI+ +DG ERRFVTLTDILGAEDAFGDMDFK Sbjct 478 TLSLLNAGVPLKAPVAGIAMGLVSDDIE----IDGKTERRFVTLTDILGAEDAFGDMDFK 533 Query 538 VAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRV 597 AGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDAR+TILEVMAEAID PDEMSPYAPR+ Sbjct 534 CAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARITILEVMAEAIDTPDEMSPYAPRI 593 Query 598 TTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAI 657 TTIKVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTVFVGA++G +AQAAIDKINAI Sbjct 594 TTIKVPVDKIGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAI 653 Query 658 ANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKL 717 ANPQLP VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLG+GKRI KVEDV VGDKL Sbjct 654 ANPQLPKVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRINKVEDVAKVGDKL 713 Query 718 RVEIADIDKRGKISLILVADEDST 741 RVEIADID RGKISL+LVA+E T Sbjct 714 RVEIADIDNRGKISLVLVAEESET 737 >gi|169630188|ref|YP_001703837.1| polynucleotide phosphorylase/polyadenylase [Mycobacterium abscessus ATCC 19977] gi|226702665|sp|B1MD62.1|PNP_MYCA9 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|169242155|emb|CAM63183.1| Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI [Mycobacterium abscessus] Length=755 Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/739 (85%), Positives = 681/739 (93%), Gaps = 10/739 (1%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 MS EI+EG+FE+TATIDNGSFGTRTIRFETGRLALQAAG+VVAYLDD+ MLLS T ASK Sbjct 1 MSVTEIEEGIFESTATIDNGSFGTRTIRFETGRLALQAAGSVVAYLDDETMLLSTTAASK 60 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 PK+HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFV GLR Sbjct 61 TPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR 120 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD 180 NEIQ+VVT+LSL+P DLYDVLAINAASASTQL GLPFSGP+GGVRVALI+G WV FPTV+ Sbjct 121 NEIQVVVTVLSLNPADLYDVLAINAASASTQLAGLPFSGPVGGVRVALIEGQWVAFPTVE 180 Query 181 QIERAVFDMVVAGRIV----EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAA 236 Q+E+AVFDMVVAGR V + DVAIMMVEAEAT+NV+ L++GGA APTE+VVA GLEAA Sbjct 181 QLEKAVFDMVVAGRKVGTAGDSDVAIMMVEAEATDNVIALIDGGAGAPTETVVAEGLEAA 240 Query 237 KPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKA 296 KPFIAALCTAQ+ELA G + KPT +FP+FPDY +DVY +V++VAT+ L+ AL+I GKA Sbjct 241 KPFIAALCTAQEELA---GSAAKPTGEFPLFPDYQDDVYAAVAAVATEPLSQALSIAGKA 297 Query 297 ERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIR 356 ERD++ DEIK V+ RL + ++GREKE+GAA R+LTKKLVRQRIL D FRIDGRG+TDIR Sbjct 298 ERDEKTDEIKVDVLGRLQEGFDGREKEIGAAFRSLTKKLVRQRILKDQFRIDGRGVTDIR 357 Query 357 ALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPF 416 ALSAEVAV+PRAHGSALFERGETQI+GVTTLDMIKMAQQ+DSLGPET+KRYMHHYNFPPF Sbjct 358 ALSAEVAVIPRAHGSALFERGETQIMGVTTLDMIKMAQQVDSLGPETTKRYMHHYNFPPF 417 Query 417 STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCA 476 STGETGRVGSPKRREIGHGALAERAL+PVLPS+EEFPYAIRQVSEALGSNGSTSMGSVCA Sbjct 418 STGETGRVGSPKRREIGHGALAERALIPVLPSIEEFPYAIRQVSEALGSNGSTSMGSVCA 477 Query 477 STLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDF 536 STLALLNAGVPLKAPVAGIAMGLVSDDI++ DG ERRFV LTDILGAEDAFGDMDF Sbjct 478 STLALLNAGVPLKAPVAGIAMGLVSDDIEL---ADGTAERRFVALTDILGAEDAFGDMDF 534 Query 537 KVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPR 596 KVAGTKDFVTALQLDTKLDGIPSQVLA AL QAKDAR TILEVMAEAID PDEMSPYAPR Sbjct 535 KVAGTKDFVTALQLDTKLDGIPSQVLAAALSQAKDARTTILEVMAEAIDAPDEMSPYAPR 594 Query 597 VTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINA 656 +TTIKVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTVFVGA DG SAQAAIDKINA Sbjct 595 ITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVFVGAADGASAQAAIDKINA 654 Query 657 IANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDK 716 IANPQLP +GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVV VGDK Sbjct 655 IANPQLPKIGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKVGDK 714 Query 717 LRVEIADIDKRGKISLILV 735 ++VEIADID RGKISL+ V Sbjct 715 IQVEIADIDNRGKISLVPV 733 >gi|312139341|ref|YP_004006677.1| polyribonucleotide nucleotidyltransferase pnp [Rhodococcus equi 103S] gi|311888680|emb|CBH47992.1| polyribonucleotide nucleotidyltransferase Pnp [Rhodococcus equi 103S] Length=752 Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 617/743 (84%), Positives = 671/743 (91%), Gaps = 18/743 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 SA E++EGVFE+TA IDNGS+GTRT+RFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK Sbjct 5 SAVEVEEGVFESTAVIDNGSYGTRTVRFETGRLAQQAAGAVVAYLDDETMLLSATSASKQ 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALI------DGTWVG 175 EIQ+VVT+LSLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVLSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSEENKKGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 FPTV+Q+E AVFDMVVAGR+VE GDVAIMMVEAEATENV+ L++GGAQAPTE++VA GLE Sbjct 185 FPTVEQLESAVFDMVVAGRVVESGDVAIMMVEAEATENVISLIDGGAQAPTEAIVAEGLE 244 Query 235 AAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGG 294 AAKPFIA+LC AQQ LA+ K+ KPT ++P+FP Y +DVY +V A L+ AL+I G Sbjct 245 AAKPFIASLCGAQQALAE---KAAKPTGEYPLFPAYQDDVYAAVEKAAAAPLSEALSIAG 301 Query 295 KAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITD 354 K ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGRGITD Sbjct 302 KQERDDKTDEVKAEVLEQVAPQFEGREKEIGAAFRSLTKKLVRQRILRDQFRIDGRGITD 361 Query 355 IRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFP 414 IR+LSAEVAV+PRAHGSALFERGETQI+GVTTLDM+KMAQQ+DSLGPETSKRYMHHYNFP Sbjct 362 IRSLSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQVDSLGPETSKRYMHHYNFP 421 Query 415 PFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 474 P+STGETGRVGSPKRREIGHGALAERALVPVLPS EEFPYAIRQVSEAL SNGSTSMGSV Sbjct 422 PYSTGETGRVGSPKRREIGHGALAERALVPVLPSQEEFPYAIRQVSEALSSNGSTSMGSV 481 Query 475 CASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDM 534 CASTL+LLNAGVPLKAPVAGIAMGLVSD+ VDG E R+V LTDILGAEDAFGDM Sbjct 482 CASTLSLLNAGVPLKAPVAGIAMGLVSDE------VDG--ETRYVALTDILGAEDAFGDM 533 Query 535 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYA 594 DFKVAGTK+FVTALQLDTKLDGIPSQVLAGAL QA DAR TILEVMAEAID PDEMSPYA Sbjct 534 DFKVAGTKNFVTALQLDTKLDGIPSQVLAGALSQAHDARTTILEVMAEAIDAPDEMSPYA 593 Query 595 PRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 654 PR+TTIKVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTV+VGA DGPSAQAAIDKI Sbjct 594 PRITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAAIDKI 653 Query 655 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 714 NAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDVVNVG Sbjct 654 NAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDVVNVG 713 Query 715 DKLRVEIADIDKRGKISLILVAD 737 KLRVEIADID RGKISLI V D Sbjct 714 SKLRVEIADIDNRGKISLIPVED 736 >gi|325672779|ref|ZP_08152475.1| polyribonucleotide nucleotidyltransferase [Rhodococcus equi ATCC 33707] gi|325556656|gb|EGD26322.1| polyribonucleotide nucleotidyltransferase [Rhodococcus equi ATCC 33707] Length=752 Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/743 (83%), Positives = 670/743 (91%), Gaps = 18/743 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 SA E++EGVFE+TA IDNGS+GTRT+RFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK Sbjct 5 SAVEVEEGVFESTAVIDNGSYGTRTVRFETGRLAQQAAGAVVAYLDDETMLLSATSASKQ 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALI------DGTWVG 175 EIQ+VVT+LSLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVLSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSEENKKGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLE 234 FPTV+Q+E AVFDMVVAGR+VE GDVAIMMVEAEATENV+ L++GGAQAPTE++VA GLE Sbjct 185 FPTVEQLESAVFDMVVAGRVVESGDVAIMMVEAEATENVISLIDGGAQAPTEAIVAEGLE 244 Query 235 AAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGG 294 AAKPFIA+LC AQQ LA+ K+ KP ++P+FP Y +DVY +V A L+ AL+I G Sbjct 245 AAKPFIASLCGAQQALAE---KAAKPAGEYPLFPAYQDDVYAAVEKAAAAPLSEALSIAG 301 Query 295 KAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITD 354 K ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGRGITD Sbjct 302 KQERDDKTDEVKAEVLEQVAPQFEGREKEIGAAFRSLTKKLVRQRILRDQFRIDGRGITD 361 Query 355 IRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFP 414 IR+LSAEVAV+PRAHGSALFERGETQI+GVTTLDM+KMAQQ+DSLGPETSKRYMHHYNFP Sbjct 362 IRSLSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQVDSLGPETSKRYMHHYNFP 421 Query 415 PFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV 474 P+STGETGRVGSPKRREIGHGALAERALVPVLPS EEFPYAIRQVSEAL SNGSTSMGSV Sbjct 422 PYSTGETGRVGSPKRREIGHGALAERALVPVLPSQEEFPYAIRQVSEALSSNGSTSMGSV 481 Query 475 CASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDM 534 CASTL+LLNAGVPLKAPVAGIAMGLVSD+ VDG E R+V LTDILGAEDAFGDM Sbjct 482 CASTLSLLNAGVPLKAPVAGIAMGLVSDE------VDG--ETRYVALTDILGAEDAFGDM 533 Query 535 DFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYA 594 DFKVAGTK+FVTALQLDTKLDGIPSQVLAGAL QA DAR TILEVMAEAID PDEMSPYA Sbjct 534 DFKVAGTKNFVTALQLDTKLDGIPSQVLAGALSQAHDARTTILEVMAEAIDAPDEMSPYA 593 Query 595 PRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKI 654 PR+TTIKVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGTV+VGA DGPSAQAAIDKI Sbjct 594 PRITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAAIDKI 653 Query 655 NAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVG 714 NAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDVVNVG Sbjct 654 NAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDVVNVG 713 Query 715 DKLRVEIADIDKRGKISLILVAD 737 KLRVEIADID RGKISLI V D Sbjct 714 SKLRVEIADIDNRGKISLIPVED 736 >gi|262202098|ref|YP_003273306.1| polyribonucleotide nucleotidyltransferase [Gordonia bronchialis DSM 43247] gi|262085445|gb|ACY21413.1| polyribonucleotide nucleotidyltransferase [Gordonia bronchialis DSM 43247] Length=759 Score = 1213 bits (3138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/742 (82%), Positives = 660/742 (89%), Gaps = 22/742 (2%) Query 5 EIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKE 64 + DE + E TA IDNGSFGTRTIRFETGRLALQAAG+V AYLDD+NMLLS T ASK+PKE Sbjct 12 DYDEAITEATAVIDNGSFGTRTIRFETGRLALQAAGSVTAYLDDENMLLSTTAASKHPKE 71 Query 65 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 124 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ Sbjct 72 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 131 Query 125 IVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWVGFPT 178 +VVT++SL+P DLYDV+AINAASASTQL GLPFSGP+GGVRVALI G WV FPT Sbjct 132 VVVTVMSLNPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIPTEENKAGQWVAFPT 191 Query 179 VDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGL 233 V+Q+E AVFDMVVAGRIV G DVAIMMVEAEAT+ V+E++ GGAQAPTE++VA GL Sbjct 192 VEQLEGAVFDMVVAGRIVSGEGDAADVAIMMVEAEATDKVLEIIAGGAQAPTEAIVAEGL 251 Query 234 EAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIG 293 EAAKPFIA LC AQ+ LA AA K T +FP+FP Y D Y +V + A D L+ LTI Sbjct 252 EAAKPFIARLCEAQKSLAAAAAKE---TGEFPLFPPYASDAYDAVEAAAKDRLSEILTIP 308 Query 294 GKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGIT 353 GK ERD++ DE+K ++ +L + +EGREKE+GAA R++TKKLVRQRILTDHFRIDGRGIT Sbjct 309 GKQERDEKTDELKDDILAQLGEQFEGREKEIGAAYRSVTKKLVRQRILTDHFRIDGRGIT 368 Query 354 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNF 413 DIR+LSAEVAV+PRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPETSKRYMHHYNF Sbjct 369 DIRSLSAEVAVIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNF 428 Query 414 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 473 PP+STGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEAL SNGSTSMGS Sbjct 429 PPYSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGSTSMGS 488 Query 474 VCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGD 533 VCAST++LLNAGVPLKAPVAGIAMGLVSD VDG E R+V LTDILGAEDAFGD Sbjct 489 VCASTMSLLNAGVPLKAPVAGIAMGLVSD------TVDG--ETRYVALTDILGAEDAFGD 540 Query 534 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPY 593 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTIL+VMAEAID PDEMSPY Sbjct 541 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDEPDEMSPY 600 Query 594 APRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDK 653 APR+TT+K+P+DKIGE+IGPKGK IN ITE+TGA ISIEDDGTVFVGATDGPSAQAAID+ Sbjct 601 APRITTVKIPMDKIGELIGPKGKTINGITEDTGANISIEDDGTVFVGATDGPSAQAAIDR 660 Query 654 INAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 713 INAIANPQLP VGERFLGT+VKTT FGAFVSLLPGRDGLVHISKLGKGKRI KVEDVVNV Sbjct 661 INAIANPQLPKVGERFLGTIVKTTAFGAFVSLLPGRDGLVHISKLGKGKRINKVEDVVNV 720 Query 714 GDKLRVEIADIDKRGKISLILV 735 G KLRVEIADID RGKISL+ V Sbjct 721 GSKLRVEIADIDDRGKISLVPV 742 >gi|296139452|ref|YP_003646695.1| polyribonucleotide nucleotidyltransferase [Tsukamurella paurometabola DSM 20162] gi|296027586|gb|ADG78356.1| polyribonucleotide nucleotidyltransferase [Tsukamurella paurometabola DSM 20162] Length=750 Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 604/740 (82%), Positives = 658/740 (89%), Gaps = 16/740 (2%) Query 5 EIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKE 64 E D+ + E A IDNGSFGTRTIRFETGR A QAAG+V AYLDD+ MLLSAT+ SK+PKE Sbjct 8 EFDDDITEAVAVIDNGSFGTRTIRFETGRFAQQAAGSVAAYLDDETMLLSATSHSKHPKE 67 Query 65 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 124 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ Sbjct 68 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 127 Query 125 IVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIER 184 +VVT++SLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALIDG WV FPTV+Q+ER Sbjct 128 VVVTVMSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIDGQWVAFPTVEQLER 187 Query 185 AVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPF 239 AVFDMVVAGRIV G DVAIMMVEAEATENV+EL+ GGA APTE+VVA GLEAAKPF Sbjct 188 AVFDMVVAGRIVSGSGKDADVAIMMVEAEATENVIELIAGGATAPTEAVVAEGLEAAKPF 247 Query 240 IAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERD 299 IA LC AQ++LA A K PT +FP+FP Y +DV+ +V + +L AL+I GK ERD Sbjct 248 IAVLCEAQKQLAAGAAK---PTGEFPLFPAYQDDVFAAVEAAGAAKLNDALSIAGKQERD 304 Query 300 QRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALS 359 D +K +V++ + +EGRE E+GAA R+LTKKLVRQRILTDHFRIDGRGITDIR+LS Sbjct 305 NATDVVKAEVLEAVGPQFEGREGEIGAAFRSLTKKLVRQRILTDHFRIDGRGITDIRSLS 364 Query 360 AEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTG 419 AE+AV+PRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPE SKRYMHHYNFPP+STG Sbjct 365 AEIAVIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPEKSKRYMHHYNFPPYSTG 424 Query 420 ETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTL 479 ETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEAL SNGSTSMGSVCAST+ Sbjct 425 ETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCASTM 484 Query 480 ALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVA 539 +LLNAGVPLKAPVAGIAMGLVSD+ VDG + R+V LTDILGAEDAFGDMDFKVA Sbjct 485 SLLNAGVPLKAPVAGIAMGLVSDE------VDG--QARYVALTDILGAEDAFGDMDFKVA 536 Query 540 GTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTT 599 GT DFVTALQLDTKLDGIPSQVLAGAL QAKDAR TILEVMAEAID PDEMSPYAPR+TT Sbjct 537 GTSDFVTALQLDTKLDGIPSQVLAGALGQAKDARTTILEVMAEAIDAPDEMSPYAPRITT 596 Query 600 IKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIAN 659 IKVPVDKIGEVIGPKGK IN+ITEETGA ISIEDDGTVFVGA DGPSAQAAID+INAIAN Sbjct 597 IKVPVDKIGEVIGPKGKTINSITEETGANISIEDDGTVFVGAADGPSAQAAIDRINAIAN 656 Query 660 PQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRV 719 PQLP VGERFLGTVVKTT FGAFVSL+PGRDGLVHISKLG GKR+ KVEDVVNVG KL+V Sbjct 657 PQLPKVGERFLGTVVKTTAFGAFVSLVPGRDGLVHISKLGNGKRVNKVEDVVNVGSKLQV 716 Query 720 EIADIDKRGKISLILVADED 739 EIADID+RGKISLI V ++D Sbjct 717 EIADIDERGKISLIPVVEDD 736 >gi|111023614|ref|YP_706586.1| polynucleotide phosphorylase/polyadenylase [Rhodococcus jostii RHA1] gi|123339641|sp|Q0S208.1|PNP_RHOSR RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|110823144|gb|ABG98428.1| polyribonucleotide nucleotidyltransferase [Rhodococcus jostii RHA1] Length=757 Score = 1211 bits (3134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/748 (84%), Positives = 677/748 (91%), Gaps = 22/748 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 SA E+DEGVFE+TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK+ Sbjct 5 SAVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATSASKH 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWVG 175 EIQ+VVT++SL+P DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSDENKAGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVA 230 FPTV+Q+E AVFDMVVAGRIV G DVAIMMVEAEAT+NV+ L++GGAQAPTE++VA Sbjct 185 FPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIDGGAQAPTEAIVA 244 Query 231 AGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAAL 290 GLEAAKPFIA LCTAQQ+LA K+ KPT DFPVFP Y +DV+ +V + A ++L+AAL Sbjct 245 EGLEAAKPFIARLCTAQQQLA---AKASKPTGDFPVFPAYQDDVFAAVEAAAAEKLSAAL 301 Query 291 TIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGR 350 TI GK ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGR Sbjct 302 TIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDGR 361 Query 351 GITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHH 410 GITDIR+LSAEVA+VPRAHGSALFERGETQILGVTTLDM+KMAQQ+DSLGPET+KRYMHH Sbjct 362 GITDIRSLSAEVAIVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMHH 421 Query 411 YNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS 470 YNFPP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTS Sbjct 422 YNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTS 481 Query 471 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDA 530 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSD QV+G E R+V LTDILGAEDA Sbjct 482 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSD--QVDG------ETRYVALTDILGAEDA 533 Query 531 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEM 590 FGDMDFKVAGTKDFVTALQLDTKLDGIPS+VLAGAL QAKDAR TILEVMAEAID PDEM Sbjct 534 FGDMDFKVAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILEVMAEAIDTPDEM 593 Query 591 SPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAA 650 SP+APRVT IKVPVDKIGEVIGPKGK+IN+ITE+TGA ISIEDDGTVFVGATDGPSAQAA Sbjct 594 SPFAPRVTAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAA 653 Query 651 IDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDV 710 ID INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDV Sbjct 654 IDMINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDV 713 Query 711 VNVGDKLRVEIADIDKRGKISLILVADE 738 V+VG KLRVEIADID RGKISLI V ++ Sbjct 714 VSVGSKLRVEIADIDNRGKISLIPVEED 741 >gi|226366103|ref|YP_002783886.1| polynucleotide phosphorylase/polyadenylase [Rhodococcus opacus B4] gi|257096705|sp|C1B324.1|PNP_RHOOB RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|226244593|dbj|BAH54941.1| guanosine pentaphosphate synthetase/polynucleotide phosphorylase [Rhodococcus opacus B4] Length=757 Score = 1211 bits (3132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/748 (84%), Positives = 677/748 (91%), Gaps = 22/748 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 SA E+DEGVFE+TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK+ Sbjct 5 SAVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATSASKH 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWVG 175 EIQ+VVT++SL+P DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSDENKAGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVA 230 FPTV+Q+E AVFDMVVAGRIV G DVAIMMVEAEAT+NV+ L++GGAQAPTE++VA Sbjct 185 FPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIDGGAQAPTETIVA 244 Query 231 AGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAAL 290 GLEAAKPFIA LCTAQQ+LA K+ KPT DFPVFP Y +DV+ +V + A ++L+AAL Sbjct 245 EGLEAAKPFIARLCTAQQQLA---VKAAKPTGDFPVFPAYQDDVFAAVEAAAAEKLSAAL 301 Query 291 TIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGR 350 TI GK ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGR Sbjct 302 TIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDGR 361 Query 351 GITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHH 410 GITDIR+LSAEVA+VPRAHGSALFERGETQILGVTTLDM+KMAQQ+DSLGPET+KRYMHH Sbjct 362 GITDIRSLSAEVAIVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMHH 421 Query 411 YNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS 470 YNFPP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTS Sbjct 422 YNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTS 481 Query 471 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDA 530 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSD QV+G E R+V LTDILGAEDA Sbjct 482 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSD--QVDG------ETRYVALTDILGAEDA 533 Query 531 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEM 590 FGDMDFKVAGTKDFVTALQLDTKLDGIPS+VLAGAL QAKDAR TILEVMAEAID PDEM Sbjct 534 FGDMDFKVAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILEVMAEAIDTPDEM 593 Query 591 SPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAA 650 SP+APRVT IKVPVDKIGEVIGPKGK+IN+ITE+TGA ISIEDDGTVFVGATDGPSAQAA Sbjct 594 SPFAPRVTAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAA 653 Query 651 IDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDV 710 ID INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDV Sbjct 654 IDMINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDV 713 Query 711 VNVGDKLRVEIADIDKRGKISLILVADE 738 V+VG KLRVEIADID RGKISLI V ++ Sbjct 714 VSVGSKLRVEIADIDNRGKISLIPVEED 741 >gi|343927041|ref|ZP_08766529.1| polyribonucleotide nucleotidyltransferase [Gordonia alkanivorans NBRC 16433] gi|343763099|dbj|GAA13455.1| polyribonucleotide nucleotidyltransferase [Gordonia alkanivorans NBRC 16433] Length=753 Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 605/742 (82%), Positives = 663/742 (90%), Gaps = 22/742 (2%) Query 5 EIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKE 64 E D+ + E TA IDNGSFGTRTIRFETGRLALQAAG+V AYLDD+NMLLS TTASK+PKE Sbjct 10 EYDDAITEATAIIDNGSFGTRTIRFETGRLALQAAGSVTAYLDDENMLLSTTTASKHPKE 69 Query 65 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 124 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ Sbjct 70 HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ 129 Query 125 IVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWVGFPT 178 +VVT+LSLDP DLYDV+AINAASASTQL GLPFSGP+GGVRVALI G WV FPT Sbjct 130 VVVTVLSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIPTEENKAGQWVAFPT 189 Query 179 VDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGL 233 V+Q+E AVFDMVVAGRIV G DVAIMMVEAEAT+NV++L+ GGAQAPTE++VA GL Sbjct 190 VEQLEGAVFDMVVAGRIVSGEGDSADVAIMMVEAEATDNVIDLIAGGAQAPTEAIVAEGL 249 Query 234 EAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIG 293 EAAKPFIA LC AQ+ LA AA K T +FP++P Y +DVY +V++ AT+ L+ LTI Sbjct 250 EAAKPFIARLCEAQKSLAAAAAKD---TGEFPLYPPYQDDVYEAVAAAATERLSEILTIP 306 Query 294 GKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGIT 353 GK ERD + DE+K ++ +L + +EGREKE+G A R+LTKKLVRQRILTDHFRIDGRGIT Sbjct 307 GKQERDDKTDELKADILAQLGEQFEGREKEIGGAYRSLTKKLVRQRILTDHFRIDGRGIT 366 Query 354 DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNF 413 DIRALSAEV V+PRAHGSALFERGETQI+G+TTLDM+KMAQQIDSLGPETSKRYMHHYNF Sbjct 367 DIRALSAEVGVIPRAHGSALFERGETQIMGITTLDMVKMAQQIDSLGPETSKRYMHHYNF 426 Query 414 PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS 473 PP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVE+FPYAIRQVSEALGSNGSTSMGS Sbjct 427 PPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEDFPYAIRQVSEALGSNGSTSMGS 486 Query 474 VCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGD 533 VCAST++LLNAGVPL+APVAGIAMGLVSD VDG E R+V LTDILGAEDAFGD Sbjct 487 VCASTMSLLNAGVPLRAPVAGIAMGLVSD------TVDG--ETRYVALTDILGAEDAFGD 538 Query 534 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPY 593 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDARLTIL+VMAEAID PDEMSP+ Sbjct 539 MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDEPDEMSPF 598 Query 594 APRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDK 653 APR+TTIK+P+DKIGE+IGPKGK IN ITEETGA ISIEDDGTVFVGA+DG AQAAID+ Sbjct 599 APRITTIKIPMDKIGELIGPKGKTINGITEETGANISIEDDGTVFVGASDGVKAQAAIDR 658 Query 654 INAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNV 713 INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLGKGKR+ KVEDVVNV Sbjct 659 INAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGKGKRVNKVEDVVNV 718 Query 714 GDKLRVEIADIDKRGKISLILV 735 G KLRVEIADID+RGKISL+ V Sbjct 719 GSKLRVEIADIDERGKISLVPV 740 >gi|326382957|ref|ZP_08204647.1| polynucleotide phosphorylase/polyadenylase [Gordonia neofelifaecis NRRL B-59395] gi|326198547|gb|EGD55731.1| polynucleotide phosphorylase/polyadenylase [Gordonia neofelifaecis NRRL B-59395] Length=750 Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/741 (81%), Positives = 656/741 (89%), Gaps = 13/741 (1%) Query 4 AEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPK 63 A+ D+ V E +A IDNGSFGTRTI FETGRLALQAAG+VVAYLD+ M+LS TTASKNPK Sbjct 6 ADFDDSVTEVSAVIDNGSFGTRTITFETGRLALQAAGSVVAYLDEGTMILSTTTASKNPK 65 Query 64 EHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEI 123 EHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEI Sbjct 66 EHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEI 125 Query 124 QIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWVGFP 177 QIV T+LSLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV FP Sbjct 126 QIVETVLSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIPTEENKAGQWVAFP 185 Query 178 TVDQIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAK 237 TV+Q+E AVFDMVVAGR+V+GDVAIMMVEAEAT+NV+ L+ GA AP+E+VVA GLEAAK Sbjct 186 TVEQLEGAVFDMVVAGRLVDGDVAIMMVEAEATDNVLALIADGATAPSEAVVAEGLEAAK 245 Query 238 PFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAE 297 PFIA LC AQ++LA AA K T DFP+FP Y +D Y +V+ AT L A++I K E Sbjct 246 PFIATLCEAQKQLAAAASKE---TRDFPLFPPYKDDAYEAVAEFATARLGEAMSIADKQE 302 Query 298 RDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRA 357 RD D +K V++ L + +EGRE E+GAA R+LTKKLVRQRILTDHFRIDGRGITDIR+ Sbjct 303 RDGATDALKGDVLEALGERFEGREGELGAAYRSLTKKLVRQRILTDHFRIDGRGITDIRS 362 Query 358 LSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFS 417 LSAEV ++PRAHGSALFERGETQI+GVTTLDM+KMAQQIDSLGPETSKRYMHHYNFPP+S Sbjct 363 LSAEVGIIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYS 422 Query 418 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS 477 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS Sbjct 423 TGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS 482 Query 478 TLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFK 537 T++LLNAGVPLKAPVAGIAMGLVSD++ +DG E R+V LTDILGAEDAFGDMDFK Sbjct 483 TISLLNAGVPLKAPVAGIAMGLVSDEV----TIDGKTETRYVALTDILGAEDAFGDMDFK 538 Query 538 VAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRV 597 VAGTKDFVTALQLDTKLDGIPS+VLAGAL QAK ARLTIL+V+AEAID PDEMSPYAPR+ Sbjct 539 VAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKQARLTILDVLAEAIDEPDEMSPYAPRI 598 Query 598 TTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAI 657 TTIK+P+DKIGE+IGPKGK IN ITEETGA ISIEDDGTVF+GA DGPSAQAAIDK+NAI Sbjct 599 TTIKIPMDKIGELIGPKGKTINGITEETGANISIEDDGTVFIGAADGPSAQAAIDKVNAI 658 Query 658 ANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKL 717 ANPQLP VGERFLGTVVKT FGAFVSLLPGRDGLVHISKLG GKRI KVEDVV VGDKL Sbjct 659 ANPQLPKVGERFLGTVVKTAAFGAFVSLLPGRDGLVHISKLGNGKRIGKVEDVVKVGDKL 718 Query 718 RVEIADIDKRGKISLILVADE 738 +VEIADID+RGKISL+ V ++ Sbjct 719 QVEIADIDERGKISLVPVRED 739 >gi|229490937|ref|ZP_04384772.1| polyribonucleotide nucleotidyltransferase [Rhodococcus erythropolis SK121] gi|229322327|gb|EEN88113.1| polyribonucleotide nucleotidyltransferase [Rhodococcus erythropolis SK121] Length=756 Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust. Identities = 612/745 (83%), Positives = 667/745 (90%), Gaps = 22/745 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 S E+DEGVFE+TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK+ Sbjct 5 SVVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATSASKH 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALI------DGTWVG 175 EIQ+VVT++SL+P DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIVSDENKTGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVA 230 FPTVDQ+E AVFDMVVAGR+V G DVAIMMVEAEAT+NV+ + GAQAPTE++VA Sbjct 185 FPTVDQLENAVFDMVVAGRVVSGSGDNADVAIMMVEAEATDNVIAKIADGAQAPTEAIVA 244 Query 231 AGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAAL 290 GLEAAKPFIA LC AQ A K+ KPT D+PVFP Y +DV+ +V + A+++L AAL Sbjct 245 EGLEAAKPFIARLCAAQAA---LASKAAKPTGDYPVFPAYQDDVFAAVEAAASEKLNAAL 301 Query 291 TIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGR 350 TI GK ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGR Sbjct 302 TIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDGR 361 Query 351 GITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHH 410 G+TDIR+LSAEVA++PRAHGSALFERGETQILGVTTLDM+KMAQQ+DSLGPET+KRYMHH Sbjct 362 GVTDIRSLSAEVAIIPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMHH 421 Query 411 YNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS 470 YNFPP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTS Sbjct 422 YNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTS 481 Query 471 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDA 530 MGSVCASTLALLNAGVPL+APVAGIAMGLVSD QV+G E R+V LTDILGAEDA Sbjct 482 MGSVCASTLALLNAGVPLRAPVAGIAMGLVSD--QVDG------ETRYVALTDILGAEDA 533 Query 531 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEM 590 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDAR TILEVMAEAID PDEM Sbjct 534 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARTTILEVMAEAIDTPDEM 593 Query 591 SPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAA 650 SP+APRVT IKVPVDKIGEVIGPKGK+IN+ITE+TGA ISIEDDGTVFVGATDGPSAQAA Sbjct 594 SPFAPRVTAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAA 653 Query 651 IDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDV 710 ID INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDV Sbjct 654 IDMINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDV 713 Query 711 VNVGDKLRVEIADIDKRGKISLILV 735 VNVG K+RVEIADID RGKISLI V Sbjct 714 VNVGSKIRVEIADIDARGKISLIPV 738 >gi|226306131|ref|YP_002766091.1| guanosine pentaphosphate synthetase/polynucleotide phosphorylase [Rhodococcus erythropolis PR4] gi|257096704|sp|C0ZYB7.1|PNP_RHOE4 RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|226185248|dbj|BAH33352.1| guanosine pentaphosphate synthetase/polynucleotide phosphorylase [Rhodococcus erythropolis PR4] Length=756 Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 612/745 (83%), Positives = 667/745 (90%), Gaps = 22/745 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 S E+DEGVFE+TA IDNGSFGTRTIRFETGRLA QAAGAVVAYLDD+ MLLSAT+ASK+ Sbjct 5 SVVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATSASKH 64 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 65 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 124 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALI------DGTWVG 175 EIQ+VVT++SL+P DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G WV Sbjct 125 EIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIVSEDNKAGQWVA 184 Query 176 FPTVDQIERAVFDMVVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVA 230 FPTVDQ+E AVFDMVVAGR+V G DVAIMMVEAEAT+NV+ + GAQAPTE++VA Sbjct 185 FPTVDQLENAVFDMVVAGRVVSGSGDNADVAIMMVEAEATDNVIAKIADGAQAPTEAIVA 244 Query 231 AGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAAL 290 GLEAAKPFIA LC AQ A K+ KPT D+PVFP Y +DV+ +V + A+++L AAL Sbjct 245 EGLEAAKPFIARLCAAQAA---LASKAAKPTGDYPVFPAYQDDVFAAVEAAASEKLNAAL 301 Query 291 TIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGR 350 TI GK ERD + DE+K +V++++A +EGREKE+GAA R+LTKKLVRQRIL D FRIDGR Sbjct 302 TIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDGR 361 Query 351 GITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHH 410 G+TDIR+LSAEVA++PRAHGSALFERGETQILGVTTLDM+KMAQQ+DSLGPET+KRYMHH Sbjct 362 GVTDIRSLSAEVAIIPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMHH 421 Query 411 YNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS 470 YNFPP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEAL SNGSTS Sbjct 422 YNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGSTS 481 Query 471 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDA 530 MGSVCASTLALLNAGVPL+APVAGIAMGLVSD QV+G E R+V LTDILGAEDA Sbjct 482 MGSVCASTLALLNAGVPLRAPVAGIAMGLVSD--QVDG------ETRYVALTDILGAEDA 533 Query 531 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEM 590 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGAL QAKDAR TILEVMAEAID PDEM Sbjct 534 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARTTILEVMAEAIDTPDEM 593 Query 591 SPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAA 650 SP+APRVT IKVPVDKIGEVIGPKGK+IN+ITE+TGA ISIEDDGTVFVGATDGPSAQAA Sbjct 594 SPFAPRVTAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAA 653 Query 651 IDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDV 710 ID INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDV Sbjct 654 IDMINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDV 713 Query 711 VNVGDKLRVEIADIDKRGKISLILV 735 VNVG K+RVEIADID RGKISLI V Sbjct 714 VNVGSKIRVEIADIDARGKISLIPV 738 >gi|333919307|ref|YP_004492888.1| polyribonucleotide nucleotidyltransferase [Amycolicicoccus subflavus DQS3-9A1] gi|333481528|gb|AEF40088.1| Polyribonucleotide nucleotidyltransferase [Amycolicicoccus subflavus DQS3-9A1] Length=764 Score = 1199 bits (3101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/745 (81%), Positives = 664/745 (90%), Gaps = 11/745 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 +FE++ +DNG FG RTIRFETG LA QAAGAVVAYLD++ MLLSATT SK PKEHFDFF Sbjct 11 IFESSVVLDNGRFGKRTIRFETGHLAQQAAGAVVAYLDEETMLLSATTVSKQPKEHFDFF 70 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRP+FV+G+RNE+Q+V+T+ Sbjct 71 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVEGVRNEVQVVITV 130 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 +SLDP +YDV+AINAASASTQL GLPFSGPIGGVRVALI+G WV FPTV Q+E AVFDM Sbjct 131 MSLDPEHMYDVVAINAASASTQLSGLPFSGPIGGVRVALIEGQWVAFPTVKQLEDAVFDM 190 Query 190 VVAGRIVEG-----DVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALC 244 VVAGRIV G DVAIMMVEAEAT++V++L+E GAQAPTE VVA GLEAAKPFIA LC Sbjct 191 VVAGRIVSGSGDNADVAIMMVEAEATDDVIKLIEAGAQAPTEDVVAEGLEAAKPFIAKLC 250 Query 245 TAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDE 304 AQQ LA A K T DFP+FP Y EDVY +V+ +AT+ L ALTI GK ER++R+DE Sbjct 251 EAQQALARGAAKE---TADFPLFPPYQEDVYTAVADIATEPLVQALTIAGKHEREERLDE 307 Query 305 IKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV 364 IK +V+ +LA +EGREKE+GAA R+LTKK VR+RI+TDHFRIDGRGITDIR+L+AEVA+ Sbjct 308 IKAEVLDQLAGKFEGREKELGAAFRSLTKKQVRRRIITDHFRIDGRGITDIRSLAAEVAI 367 Query 365 VPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV 424 +PRAHGSALFERGETQILGVTTLDM+KMAQQIDSLGPE SKRYMHHYNFPP+STGETGRV Sbjct 368 IPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPEKSKRYMHHYNFPPYSTGETGRV 427 Query 425 GSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNA 484 G+PKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCA+TL++LNA Sbjct 428 GTPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAATLSMLNA 487 Query 485 GVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDF 544 GVPLKAPVAGIAMGLVS+D + DG ERR+V LTDILGAEDAFGDMDFKVAGTKDF Sbjct 488 GVPLKAPVAGIAMGLVSEDAET---ADGKTERRYVALTDILGAEDAFGDMDFKVAGTKDF 544 Query 545 VTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPV 604 VTALQLDTKLDGIPS VLAGAL QA+DARLTIL+VMAEAIDRPD+MSPYAPR+TTIKVPV Sbjct 545 VTALQLDTKLDGIPSSVLAGALSQARDARLTILDVMAEAIDRPDDMSPYAPRITTIKVPV 604 Query 605 DKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPT 664 DKIGEVIGPKGKVIN ITEETGA ISIEDDGT+FVGATDGPSAQAAID+IN IANPQ P Sbjct 605 DKIGEVIGPKGKVINQITEETGASISIEDDGTIFVGATDGPSAQAAIDRINQIANPQQPQ 664 Query 665 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI 724 VG+RFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDVV+VG KLRVEI DI Sbjct 665 VGDRFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGGGKRIAKVEDVVSVGSKLRVEITDI 724 Query 725 DKRGKISLILVADEDSTAAATDAAT 749 D RGKISL+ + +E T +++T Sbjct 725 DNRGKISLVPLDEESETGETAESST 749 >gi|54025857|ref|YP_120099.1| polynucleotide phosphorylase/polyadenylase [Nocardia farcinica IFM 10152] gi|81374135|sp|Q5YSV6.1|PNP_NOCFA RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|54017365|dbj|BAD58735.1| putative guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase [Nocardia farcinica IFM 10152] Length=764 Score = 1192 bits (3083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/756 (82%), Positives = 670/756 (89%), Gaps = 17/756 (2%) Query 2 SAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKN 61 SA E++ GVFE+ A IDNGS+GTRT+RFETGRLA QAAG+VVAYLDD+ MLLSATTA K Sbjct 10 SAVEVEPGVFESVALIDNGSYGTRTVRFETGRLARQAAGSVVAYLDDETMLLSATTAGKT 69 Query 62 PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 121 PK+ FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN Sbjct 70 PKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRN 129 Query 122 EIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID---------GT 172 E+Q+VVT+LSLDP DLYDV+AINAASASTQ+ GLPFSGP+GGVRVALI G Sbjct 130 EVQVVVTVLSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIPDQGANSAGGGQ 189 Query 173 WVGFPTVDQIERAVFDMVVAGRIVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAA 231 WV FPTV+Q+E AVFDMVVAGR+VE GDVAIMMVEAEATE V+ELVEGGAQAPTE+VVA Sbjct 190 WVAFPTVEQLEGAVFDMVVAGRVVESGDVAIMMVEAEATEKVIELVEGGAQAPTEAVVAE 249 Query 232 GLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALT 291 GLEAAKPFIA LC AQQ+LA+ A K PT +FP+FP YG DVY +V A EL AL+ Sbjct 250 GLEAAKPFIARLCRAQQDLAELAAK---PTEEFPLFPPYGPDVYEAVEGAAEAELGEALS 306 Query 292 IGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRG 351 I GK ER+++IDEIK V+ RLA+ + GREKE+GAA R++TKKLVRQRILTD FRIDGRG Sbjct 307 IAGKQEREEKIDEIKLAVLDRLAEQFAGREKELGAAFRSVTKKLVRQRILTDGFRIDGRG 366 Query 352 ITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHY 411 + DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDM+KMAQQ+DSLGPETSKRYMHHY Sbjct 367 LADIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETSKRYMHHY 426 Query 412 NFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSM 471 NFPPFSTGETGRVGSPKRREIGHGALAERAL+PVLPS E+FPYAIRQVSEALGSNGSTSM Sbjct 427 NFPPFSTGETGRVGSPKRREIGHGALAERALIPVLPSQEDFPYAIRQVSEALGSNGSTSM 486 Query 472 GSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAF 531 GSVCASTL+LLNAGVPLKAPVAGIAMGLVSD + + G E R+V LTDILGAEDAF Sbjct 487 GSVCASTLSLLNAGVPLKAPVAGIAMGLVSDTVTND---KGEQEVRYVALTDILGAEDAF 543 Query 532 GDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMS 591 GDMDFKVAGT++FVTALQLDTKLDGIPSQVLAGAL QA DAR TIL+VMAEAI PDEMS Sbjct 544 GDMDFKVAGTREFVTALQLDTKLDGIPSQVLAGALSQAHDARTTILDVMAEAIATPDEMS 603 Query 592 PYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAI 651 PYAPRVT IK+PVDKIGEVIGPKGKVIN ITE+TGA ISIEDDGTVFVGATDGPSAQAAI Sbjct 604 PYAPRVTAIKIPVDKIGEVIGPKGKVINQITEDTGANISIEDDGTVFVGATDGPSAQAAI 663 Query 652 DKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVV 711 D INAIANPQLP VGERFLGTVVKTT FGAFVSLLPGRDGLVHISKLG GKR+AKVEDVV Sbjct 664 DAINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRVAKVEDVV 723 Query 712 NVGDKLRVEIADIDKRGKISLILVADEDSTAAATDA 747 NVGDKLRVEIADID RGKISL+ V DE++ A DA Sbjct 724 NVGDKLRVEIADIDNRGKISLVPV-DENADEPAADA 758 >gi|331698425|ref|YP_004334664.1| polyribonucleotide nucleotidyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326953114|gb|AEA26811.1| Polyribonucleotide nucleotidyltransferase [Pseudonocardia dioxanivorans CB1190] Length=750 Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/743 (80%), Positives = 643/743 (87%), Gaps = 11/743 (1%) Query 6 IDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEH 65 I + V ETTA IDNGSFGTRTIRFETGRLA QAAG+VVAYLDD+ MLLSATTASK PKE Sbjct 5 ITDDVHETTAVIDNGSFGTRTIRFETGRLARQAAGSVVAYLDDETMLLSATTASKQPKEQ 64 Query 66 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQI 125 FDFFPLTVDVEERMYA G+IPGSFFRREGRP TDAILTCRLIDRPLRPSFVDGLRNEIQI Sbjct 65 FDFFPLTVDVEERMYAIGKIPGSFFRREGRPGTDAILTCRLIDRPLRPSFVDGLRNEIQI 124 Query 126 VVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERA 185 VVT+LSLDP D YD LAINAASASTQL GLPFSGPIGGVRVALIDG WV FP + ++RA Sbjct 125 VVTVLSLDPRDPYDALAINAASASTQLAGLPFSGPIGGVRVALIDGQWVAFPQYEDLQRA 184 Query 186 VFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCT 245 VFDMVVAGRIV DVAIMMVEAEAT VELV GGAQAPTE VVA GLEAAKPFI +LC Sbjct 185 VFDMVVAGRIVGDDVAIMMVEAEATTETVELVAGGAQAPTEQVVAQGLEAAKPFIRSLCV 244 Query 246 AQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEI 305 AQQ+LAD A KPT FP +P Y D + +V + A+D+LAAALTI GK ER+ RIDE+ Sbjct 245 AQQQLADVA---AKPTGSFPTYPAYQPDAFEAVEAAASDDLAAALTIAGKQEREARIDEV 301 Query 306 KTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 365 K V+ L + +EGREKE+GAA R+L KKLVR+RILTD RIDGRG+TDIR LSAEV VV Sbjct 302 KAGVLASLGEKFEGREKELGAAFRSLNKKLVRRRILTDQVRIDGRGLTDIRPLSAEVEVV 361 Query 366 PRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVG 425 PRAHGSALFERGETQI+GVTTL+M++M QQIDSLGPET KRY+HHYNFPP+STGETGRVG Sbjct 362 PRAHGSALFERGETQIMGVTTLNMLRMEQQIDSLGPETHKRYLHHYNFPPYSTGETGRVG 421 Query 426 SPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 485 SPKRREIGHGALAERAL+PVLP+ EEFPYAIRQVSEALGSNGSTSMGSVCAST++LLNAG Sbjct 422 SPKRREIGHGALAERALLPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAG 481 Query 486 VPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFV 545 VPLKAPVAGIAMGLVSD+ VDG + +V LTDILGAEDAFGDMDFKVAGT DFV Sbjct 482 VPLKAPVAGIAMGLVSDE------VDG--KATYVALTDILGAEDAFGDMDFKVAGTSDFV 533 Query 546 TALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVD 605 TALQLDTKLDGIPS+VLA AL QAKDARLTILEV+ EAID PDEMS YAPRVT IKVPVD Sbjct 534 TALQLDTKLDGIPSEVLAAALNQAKDARLTILEVLGEAIDGPDEMSTYAPRVTAIKVPVD 593 Query 606 KIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTV 665 KIGEVIGPKGK+IN+ITE+TGA ISIEDDGT++VGA DGPSA+AAI INAIANPQLP + Sbjct 594 KIGEVIGPKGKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGMINAIANPQLPKI 653 Query 666 GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADID 725 GERFLGTVVKT FGAFVSL+PG+DGLVHISKLG GKRI KVEDVV VGDKLRVE+ DID Sbjct 654 GERFLGTVVKTAAFGAFVSLVPGKDGLVHISKLGNGKRIGKVEDVVKVGDKLRVEVTDID 713 Query 726 KRGKISLILVADEDSTAAATDAA 748 RGKISL+ V +E + A D A Sbjct 714 NRGKISLVPVQEESAAAGGDDTA 736 >gi|257055504|ref|YP_003133336.1| polynucleotide phosphorylase/polyadenylase [Saccharomonospora viridis DSM 43017] gi|256585376|gb|ACU96509.1| guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [Saccharomonospora viridis DSM 43017] Length=823 Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 572/735 (78%), Positives = 642/735 (88%), Gaps = 13/735 (1%) Query 8 EGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFD 67 + V ET A IDNG FG RT+RFETGRLA QAAG+VVAYLDD+ M+LSATTASK PKE FD Sbjct 10 QAVHETEAVIDNGRFGQRTVRFETGRLARQAAGSVVAYLDDETMVLSATTASKQPKEQFD 69 Query 68 FFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVV 127 FFPLTVDVEERMYAAGRIPG+FFRREGRPSTDAILTCRLIDRPLRPSF +GLRNEIQIVV Sbjct 70 FFPLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTCRLIDRPLRPSFAEGLRNEIQIVV 129 Query 128 TILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVF 187 T+ SL P D YDVLAINAASASTQ+ GLPFSGPIGGVR+ LIDG WV FPT Q+ERA F Sbjct 130 TVQSLHPDDPYDVLAINAASASTQIAGLPFSGPIGGVRLGLIDGEWVAFPTWSQLERATF 189 Query 188 DMVVAGRIV---EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALC 244 +MVVAGRIV DVAIMMVEAE TEN ++L+ GA APTE VA GL+AAKPFI LC Sbjct 190 NMVVAGRIVGDRPEDVAIMMVEAEGTENTLDLIANGATAPTEKTVAEGLDAAKPFIRVLC 249 Query 245 TAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDE 304 AQQ LAD A K P +FP+FPDY +D Y +V+++ATD LA ALTI GK ER+ IDE Sbjct 250 EAQQRLADVAAK---PVGEFPLFPDYEQDAYDAVAAIATDGLAKALTIAGKQERENAIDE 306 Query 305 IKTQVVQRLA----DTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 +K V++R+ + +EGREKE+GAA RALTKKL+RQRIL D RIDGRG+TDIR L+A Sbjct 307 VKNAVLERVGIGEGEAFEGREKEIGAAFRALTKKLIRQRILRDKVRIDGRGVTDIRQLAA 366 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EV+VVPRAHGSALFERGETQILGVTTL+M++M QQ+D+L PET+KR++HHYNFPP+STGE Sbjct 367 EVSVVPRAHGSALFERGETQILGVTTLNMLRMEQQLDTLSPETTKRFLHHYNFPPYSTGE 426 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVG+PKRREIGHG LAERALVPV+P EEFPYAIRQVSEALGSNGSTSMGSVCAST++ Sbjct 427 TGRVGTPKRREIGHGMLAERALVPVVPKREEFPYAIRQVSEALGSNGSTSMGSVCASTMS 486 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSD+++ E +G E R+V LTDILGAEDAFGDMDFKVAG Sbjct 487 LLNAGVPLKAPVAGIAMGLVSDEVENE---NGETEVRYVALTDILGAEDAFGDMDFKVAG 543 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 T++ +TALQLDTKLDGIPS VLA ALEQA+DARLTIL+VMAEAID PDEMSPYAPRVT++ Sbjct 544 TREIITALQLDTKLDGIPSDVLAAALEQARDARLTILDVMAEAIDGPDEMSPYAPRVTSL 603 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGK+IN+ITEETGA ISIEDDGT++VGA DGPSA AAI+KINAIANP Sbjct 604 KVPVDKIGEVIGPKGKMINSITEETGADISIEDDGTIYVGAADGPSADAAIEKINAIANP 663 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLP VGER+LGTVVKT FGAFVSLLPGRDGLVHISKLG GKR+AKVEDVV+VGDKL+VE Sbjct 664 QLPKVGERYLGTVVKTAAFGAFVSLLPGRDGLVHISKLGNGKRVAKVEDVVHVGDKLQVE 723 Query 721 IADIDKRGKISLILV 735 IADID RGKISL+LV Sbjct 724 IADIDSRGKISLVLV 738 >gi|256379820|ref|YP_003103480.1| polynucleotide phosphorylase/polyadenylase [Actinosynnema mirum DSM 43827] gi|255924123|gb|ACU39634.1| guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase [Actinosynnema mirum DSM 43827] Length=747 Score = 1157 bits (2994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/730 (79%), Positives = 640/730 (88%), Gaps = 11/730 (1%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 V ET+A IDNG FGTRTIRFETG LA QAAG+VVAYLDD+ MLLSATTASK PKEHFDFF Sbjct 6 VHETSAVIDNGRFGTRTIRFETGHLARQAAGSVVAYLDDETMLLSATTASKAPKEHFDFF 65 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ+V+T+ Sbjct 66 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQVVITV 125 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 +SL+P DLYDV+AINAASASTQL GLPFSGPIGGVRVALI+G WV FPT +Q+E AVFDM Sbjct 126 MSLNPADLYDVVAINAASASTQLAGLPFSGPIGGVRVALIEGQWVAFPTHEQLENAVFDM 185 Query 190 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 249 VVAGR+V DVAIMMVEAEATE V++L+ GAQAPTE VVAAGLEA+KPFI LC + Sbjct 186 VVAGRVVGDDVAIMMVEAEATEKVIDLIGEGAQAPTEEVVAAGLEASKPFIKVLC---EA 242 Query 250 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV 309 A A + K T +FP FP Y D + +V + +LA ALTI GK ER+ RIDE+K V Sbjct 243 QAQLAQVAAKATGEFPTFPAYQADAFEAVEAAGASDLAQALTIAGKQEREGRIDEVKASV 302 Query 310 VQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAH 369 +++LA +EGREKEVGAA R+LTKKLVRQRIL D RIDGRG+TDIR+L AEVA++PR H Sbjct 303 LEKLAAQFEGREKEVGAAFRSLTKKLVRQRILRDKVRIDGRGLTDIRSLGAEVAIIPRTH 362 Query 370 GSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKR 429 GSALFERGETQILGVTTL+M++M QQIDSL PET KRY+HHYNFPP+STGETGRVGSPKR Sbjct 363 GSALFERGETQILGVTTLNMLRMEQQIDSLSPETHKRYLHHYNFPPYSTGETGRVGSPKR 422 Query 430 REIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLK 489 REIGHGALAERAL+PVLP +EFPYAIRQVSEALGSNGSTSMGSVCAST++LLNAGVPLK Sbjct 423 REIGHGALAERALMPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLK 482 Query 490 APVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQ 549 APV+GIAMGLVSD+ VDG E +V LTDILGAEDAFGDMDFKVAGTK FVTALQ Sbjct 483 APVSGIAMGLVSDE------VDGKTE--YVALTDILGAEDAFGDMDFKVAGTKQFVTALQ 534 Query 550 LDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGE 609 LDTKLDGIPS+VLA AL QA+DARL ILEVMAEAID PDEMSP+APRVT++K+P DKIGE Sbjct 535 LDTKLDGIPSEVLASALSQARDARLAILEVMAEAIDVPDEMSPFAPRVTSVKIPTDKIGE 594 Query 610 VIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERF 669 VIGPKGK+IN+ITE+TGA ISIEDDGT++VGA DGPSA+AAI INAIANPQLP VGERF Sbjct 595 VIGPKGKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGLINAIANPQLPKVGERF 654 Query 670 LGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGK 729 LGTVVKT FGAFVSLLPG+DGL+HISKLG GKRI KVEDVV VGDKLRVEIADID+RGK Sbjct 655 LGTVVKTAAFGAFVSLLPGKDGLIHISKLGNGKRIGKVEDVVKVGDKLRVEIADIDQRGK 714 Query 730 ISLILVADED 739 ISL+LV++E+ Sbjct 715 ISLVLVSEEE 724 >gi|291009326|ref|ZP_06567299.1| polynucleotide phosphorylase/polyadenylase [Saccharopolyspora erythraea NRRL 2338] Length=747 Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/741 (80%), Positives = 653/741 (89%), Gaps = 15/741 (2%) Query 6 IDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEH 65 +DEGV+E TA +DNG+FGTRT+RFETGRLA QAAG+VVAYLDDD MLLSATTASK PKEH Sbjct 4 LDEGVYEATAVLDNGAFGTRTVRFETGRLAKQAAGSVVAYLDDDTMLLSATTASKQPKEH 63 Query 66 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQI 125 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNE+Q+ Sbjct 64 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEVQV 123 Query 126 VVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERA 185 VVT++SLDP D YDVLAIN ASASTQL GLPFSGP+GG R+ALIDG WV FPT +Q+ERA Sbjct 124 VVTVMSLDPQDPYDVLAINGASASTQLSGLPFSGPVGGTRMALIDGQWVAFPTYEQLERA 183 Query 186 VFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCT 245 VFDMVVAGRIV DVAIMMVEAEATE LV GAQAPTE VVAAGLEAAKPFI LC Sbjct 184 VFDMVVAGRIVGDDVAIMMVEAEATEKTAGLVSAGAQAPTEEVVAAGLEAAKPFIRTLCQ 243 Query 246 AQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEI 305 AQQ+LA AAGK+ T +FPVFP Y +D + +V A+ ELA AL I K ER+ R+DEI Sbjct 244 AQQQLAQAAGKA---TEEFPVFPAYADDAFTAVEQAASAELAEALKIASKQERENRLDEI 300 Query 306 KTQVVQRL----ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAE 361 K V++++ + +EGREKEVGAA R+LTKKLVRQRI+ D RIDGRG+TDIR+LSAE Sbjct 301 KAAVLEKVGTGEGEQFEGREKEVGAAFRSLTKKLVRQRIIRDQVRIDGRGLTDIRSLSAE 360 Query 362 VAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGET 421 V V+PRAHGSALFERGETQILGV+TL+M+++ Q IDSL PET+KRYMHHYNFPP+STGET Sbjct 361 VGVIPRAHGSALFERGETQILGVSTLNMLRLEQTIDSLSPETTKRYMHHYNFPPYSTGET 420 Query 422 GRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLAL 481 GRVGSPKRREIGHGALAERAL+PVLP+ EEFPYA+RQVSEALGSNGSTSMGSVCASTL+L Sbjct 421 GRVGSPKRREIGHGALAERALIPVLPTREEFPYALRQVSEALGSNGSTSMGSVCASTLSL 480 Query 482 LNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGT 541 LNAGVPLKAPVAGIAMGLVSD+I DG + +V LTDILGAEDAFGDMDFKVAGT Sbjct 481 LNAGVPLKAPVAGIAMGLVSDEI------DG--KTHYVALTDILGAEDAFGDMDFKVAGT 532 Query 542 KDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIK 601 K+FVTALQLDTKLDGIPS+VLA AL QA+DAR TILEVMAEAI +PDEMSP+APRVT+I Sbjct 533 KEFVTALQLDTKLDGIPSEVLAQALGQARDARFTILEVMAEAIGKPDEMSPHAPRVTSIS 592 Query 602 VPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQ 661 +PVDKIGEVIGPKGK+IN+ITEETGA+I+IEDDGT++VGA DGPSA+AAIDKINAIANPQ Sbjct 593 IPVDKIGEVIGPKGKMINSITEETGAEITIEDDGTIYVGAADGPSAEAAIDKINAIANPQ 652 Query 662 LPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEI 721 LP VGERFLGTVVKT FGAFVSLLPG+DGLVHISKLG GKRI KVEDVVNVGDKLRVEI Sbjct 653 LPKVGERFLGTVVKTAAFGAFVSLLPGKDGLVHISKLGNGKRIGKVEDVVNVGDKLRVEI 712 Query 722 ADIDKRGKISLILVADEDSTA 742 ADID RGKISL++V DE A Sbjct 713 ADIDSRGKISLVVVDDEAENA 733 >gi|302528525|ref|ZP_07280867.1| polyribonucleotide nucleotidyltransferase [Streptomyces sp. AA4] gi|302437420|gb|EFL09236.1| polyribonucleotide nucleotidyltransferase [Streptomyces sp. AA4] Length=749 Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/740 (78%), Positives = 646/740 (88%), Gaps = 17/740 (2%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 VFET A +DNG FGTRT+RFETGRLA QAAGAVVAYLD++ MLLSATTASK+PKEHFDFF Sbjct 9 VFETEAVLDNGRFGTRTVRFETGRLAKQAAGAVVAYLDEETMLLSATTASKHPKEHFDFF 68 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPG+FFRREGRPSTDAILT RLIDRPLRPSF DGLRNEIQ+V+T+ Sbjct 69 PLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTARLIDRPLRPSFADGLRNEIQVVITV 128 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 SL+P D YDVLAINAASASTQ+ GLPFSGP+GGVRVALI+ WV FPT Q+E+A F+M Sbjct 129 QSLNPDDPYDVLAINAASASTQIAGLPFSGPVGGVRVALIEDQWVAFPTWPQLEKATFNM 188 Query 190 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 249 VVAGRIV DVAIMMVEAE TE+ ++L+ G +AP E+ VA GLEAAKPFI LC AQQ Sbjct 189 VVAGRIVGDDVAIMMVEAEGTEHTLDLIAAGGKAPDEAAVAEGLEAAKPFIRVLCEAQQR 248 Query 250 LA-DAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQ 308 LA DAA KPT +FPV+P Y D+Y +V+++A+DELA AL I GK ERD DE+K Sbjct 249 LAADAA----KPTGEFPVYPAYQPDIYEAVAAIASDELAKALQIAGKQERDAATDEVKAT 304 Query 309 VVQRLA----DTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV 364 V+++L + +EGR+KEVG A +ALTKK++R R+LT+ R+DGRG+TDIR LSAEVAV Sbjct 305 VLEKLGLGEGEAFEGRDKEVGGAFKALTKKIMRNRVLTEKIRMDGRGLTDIRQLSAEVAV 364 Query 365 VPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV 424 VPRAHGSALFERGETQILG+TTL+M++M QQIDSL PET+KRY+HHYNFPPFSTGETGRV Sbjct 365 VPRAHGSALFERGETQILGITTLNMLRMEQQIDSLSPETTKRYLHHYNFPPFSTGETGRV 424 Query 425 GSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNA 484 GSPKRREIGHG LAERALVPVLP +EFPYAIRQVSEALGSNGSTSMGSVCAST+ LLNA Sbjct 425 GSPKRREIGHGMLAERALVPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMGLLNA 484 Query 485 GVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDF 544 GVPLKAPVAGIAMGLVSD+ VDG E R+V LTDILGAEDA GDMDFKVAGTKD Sbjct 485 GVPLKAPVAGIAMGLVSDE------VDG--ETRYVALTDILGAEDALGDMDFKVAGTKDI 536 Query 545 VTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPV 604 +TALQLDTKLDGIPS+VLA AL+QAKDARLTIL+V+AEAID PDEMSPYAPRVT++K+PV Sbjct 537 ITALQLDTKLDGIPSEVLAAALKQAKDARLTILDVIAEAIDGPDEMSPYAPRVTSVKIPV 596 Query 605 DKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPT 664 DKIGEVIGPKGK+IN+ITEETGA ISIEDDGT++VGA DGPSA+AAI KINAIANPQLP Sbjct 597 DKIGEVIGPKGKMINSITEETGADISIEDDGTIYVGAADGPSAEAAIGKINAIANPQLPK 656 Query 665 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI 724 VGERFLGTVVKT FGAFVSLLPG+DGLVHISKLG GKRIAKVEDVVNVGDK+RVEIADI Sbjct 657 VGERFLGTVVKTAAFGAFVSLLPGKDGLVHISKLGNGKRIAKVEDVVNVGDKIRVEIADI 716 Query 725 DKRGKISLILVADEDSTAAA 744 D RGKISLI+V +ED+ A Sbjct 717 DNRGKISLIVVKEEDAAKPA 736 >gi|134102361|ref|YP_001108022.1| polynucleotide phosphorylase/polyadenylase [Saccharopolyspora erythraea NRRL 2338] gi|187611285|sp|A4FM22.1|PNP_SACEN RecName: Full=Polyribonucleotide nucleotidyltransferase; AltName: Full=Polynucleotide phosphorylase; Short=PNPase gi|133914984|emb|CAM05097.1| putative guanosine pentaphosphate synthetase and polyribonucleotide nucleotidyltransferase [Saccharopolyspora erythraea NRRL 2338] Length=750 Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/741 (80%), Positives = 653/741 (89%), Gaps = 15/741 (2%) Query 6 IDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEH 65 +DEGV+E TA +DNG+FGTRT+RFETGRLA QAAG+VVAYLDDD MLLSATTASK PKEH Sbjct 7 LDEGVYEATAVLDNGAFGTRTVRFETGRLAKQAAGSVVAYLDDDTMLLSATTASKQPKEH 66 Query 66 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQI 125 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNE+Q+ Sbjct 67 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEVQV 126 Query 126 VVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERA 185 VVT++SLDP D YDVLAIN ASASTQL GLPFSGP+GG R+ALIDG WV FPT +Q+ERA Sbjct 127 VVTVMSLDPQDPYDVLAINGASASTQLSGLPFSGPVGGTRMALIDGQWVAFPTYEQLERA 186 Query 186 VFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCT 245 VFDMVVAGRIV DVAIMMVEAEATE LV GAQAPTE VVAAGLEAAKPFI LC Sbjct 187 VFDMVVAGRIVGDDVAIMMVEAEATEKTAGLVSAGAQAPTEEVVAAGLEAAKPFIRTLCQ 246 Query 246 AQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEI 305 AQQ+LA AAGK+ T +FPVFP Y +D + +V A+ ELA AL I K ER+ R+DEI Sbjct 247 AQQQLAQAAGKA---TEEFPVFPAYADDAFTAVEQAASAELAEALKIASKQERENRLDEI 303 Query 306 KTQVVQRL----ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAE 361 K V++++ + +EGREKEVGAA R+LTKKLVRQRI+ D RIDGRG+TDIR+LSAE Sbjct 304 KAAVLEKVGTGEGEQFEGREKEVGAAFRSLTKKLVRQRIIRDQVRIDGRGLTDIRSLSAE 363 Query 362 VAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGET 421 V V+PRAHGSALFERGETQILGV+TL+M+++ Q IDSL PET+KRYMHHYNFPP+STGET Sbjct 364 VGVIPRAHGSALFERGETQILGVSTLNMLRLEQTIDSLSPETTKRYMHHYNFPPYSTGET 423 Query 422 GRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLAL 481 GRVGSPKRREIGHGALAERAL+PVLP+ EEFPYA+RQVSEALGSNGSTSMGSVCASTL+L Sbjct 424 GRVGSPKRREIGHGALAERALIPVLPTREEFPYALRQVSEALGSNGSTSMGSVCASTLSL 483 Query 482 LNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGT 541 LNAGVPLKAPVAGIAMGLVSD+I DG + +V LTDILGAEDAFGDMDFKVAGT Sbjct 484 LNAGVPLKAPVAGIAMGLVSDEI------DG--KTHYVALTDILGAEDAFGDMDFKVAGT 535 Query 542 KDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIK 601 K+FVTALQLDTKLDGIPS+VLA AL QA+DAR TILEVMAEAI +PDEMSP+APRVT+I Sbjct 536 KEFVTALQLDTKLDGIPSEVLAQALGQARDARFTILEVMAEAIGKPDEMSPHAPRVTSIS 595 Query 602 VPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQ 661 +PVDKIGEVIGPKGK+IN+ITEETGA+I+IEDDGT++VGA DGPSA+AAIDKINAIANPQ Sbjct 596 IPVDKIGEVIGPKGKMINSITEETGAEITIEDDGTIYVGAADGPSAEAAIDKINAIANPQ 655 Query 662 LPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEI 721 LP VGERFLGTVVKT FGAFVSLLPG+DGLVHISKLG GKRI KVEDVVNVGDKLRVEI Sbjct 656 LPKVGERFLGTVVKTAAFGAFVSLLPGKDGLVHISKLGNGKRIGKVEDVVNVGDKLRVEI 715 Query 722 ADIDKRGKISLILVADEDSTA 742 ADID RGKISL++V DE A Sbjct 716 ADIDSRGKISLVVVDDEAENA 736 >gi|300788163|ref|YP_003768454.1| polyribonucleotide nucleotidyltransferase [Amycolatopsis mediterranei U32] gi|299797677|gb|ADJ48052.1| polyribonucleotide nucleotidyltransferase [Amycolatopsis mediterranei U32] gi|340529748|gb|AEK44953.1| polynucleotide phosphorylase/polyadenylase [Amycolatopsis mediterranei S699] Length=753 Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 569/734 (78%), Positives = 646/734 (89%), Gaps = 15/734 (2%) Query 10 VFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFF 69 V ET A IDNG FGTRT+RFETGRLA QAAGAVVAYLD++ MLLSATTASK+PK+HFDFF Sbjct 9 VHETEAVIDNGRFGTRTVRFETGRLAKQAAGAVVAYLDEETMLLSATTASKHPKDHFDFF 68 Query 70 PLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTI 129 PLTVDVEERMYAAGRIPG+FFRREGRPSTDAILTCRLIDRPLRPSF DGLRNEIQ+V+T+ Sbjct 69 PLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTCRLIDRPLRPSFTDGLRNEIQVVITV 128 Query 130 LSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDM 189 SL+P D YDVLAINAASASTQ+ GLPFSGP+GGVRVAL++ WV FPT Q+E+A F+M Sbjct 129 QSLNPDDPYDVLAINAASASTQIAGLPFSGPVGGVRVALVEDQWVAFPTWSQLEKATFNM 188 Query 190 VVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQE 249 VVAGRIV DVAIMMVEAE TE+ ++L+ G +AP E+ VAAGLEA+KPFI LC AQQ+ Sbjct 189 VVAGRIVGDDVAIMMVEAEGTEHTLDLIAAGGKAPDEAAVAAGLEASKPFIKVLCEAQQQ 248 Query 250 LADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQV 309 LAD A KPT +FPVF Y +DVY +V+++ATD+LA AL I GK +RD DE+K V Sbjct 249 LADVA---AKPTGEFPVFLAYEQDVYDAVAAIATDDLARALQIPGKQDRDAATDEVKAAV 305 Query 310 VQRL----ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVV 365 ++++ + +EGR+KE+G A +ALTKK++RQR+LT+ R+DGRG+TDIR+LSAEVAV+ Sbjct 306 LEKIGLGEGEAFEGRDKEIGGAFKALTKKIMRQRVLTEKIRMDGRGLTDIRSLSAEVAVI 365 Query 366 PRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVG 425 PRAHGSALFERGETQILGVTTL+M+++ QQIDSL PET KRYMHHYNFPPFSTGETGRVG Sbjct 366 PRAHGSALFERGETQILGVTTLNMLRLEQQIDSLSPETHKRYMHHYNFPPFSTGETGRVG 425 Query 426 SPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAG 485 SPKRREIGHG LAERALVPVLP +EFPYAIRQVSEALGSNGSTSMGSVCAST+AL NAG Sbjct 426 SPKRREIGHGMLAERALVPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMALYNAG 485 Query 486 VPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFV 545 VPLKAPVAGIAMGLVSD+ VDG E R+V LTDILGAEDA GDMDFKVAGTKD + Sbjct 486 VPLKAPVAGIAMGLVSDE------VDG--ETRYVALTDILGAEDALGDMDFKVAGTKDII 537 Query 546 TALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVD 605 TALQLDTKLDGIPS+VLA AL+QAKDARLTILEV+AEAID PDEMSPY+PRVT++K+PVD Sbjct 538 TALQLDTKLDGIPSEVLAAALKQAKDARLTILEVIAEAIDSPDEMSPYSPRVTSVKIPVD 597 Query 606 KIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTV 665 KIGEVIGPKGK+IN+ITE+TGA ISIEDDGT++VGA DGPSA+AAID INAIANPQLP V Sbjct 598 KIGEVIGPKGKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIDLINAIANPQLPKV 657 Query 666 GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADID 725 GERFLGTVVKT FGAFVSLLPG+DGLVHISKLG GKRIAKVEDVVNVGDKLRVEIADID Sbjct 658 GERFLGTVVKTAAFGAFVSLLPGKDGLVHISKLGNGKRIAKVEDVVNVGDKLRVEIADID 717 Query 726 KRGKISLILVADED 739 RGKISLI+V D++ Sbjct 718 NRGKISLIVVKDDE 731 >gi|324998720|ref|ZP_08119832.1| polynucleotide phosphorylase/polyadenylase [Pseudonocardia sp. P1] Length=759 Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/737 (78%), Positives = 634/737 (87%), Gaps = 17/737 (2%) Query 7 DEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHF 66 ++GV E+TA IDNG++GTRT+RFE GRLA QAAG+VVAYLDD+ MLLSATTASK PK+ F Sbjct 7 EDGVHESTAVIDNGAYGTRTVRFEAGRLARQAAGSVVAYLDDETMLLSATTASKRPKDQF 66 Query 67 DFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIV 126 DFFPLTVDVEERMYAAGRIPGSFFRREGRP TDAILTCRLIDRPLRPSFVDGLRNEIQ+V Sbjct 67 DFFPLTVDVEERMYAAGRIPGSFFRREGRPGTDAILTCRLIDRPLRPSFVDGLRNEIQVV 126 Query 127 VTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALI------DGTWVGFPTVD 180 VT++SLDP D YDV+AINAASASTQL GLPFSGP+GGVRVALI D WV FPT D Sbjct 127 VTVMSLDPKDPYDVVAINAASASTQLAGLPFSGPVGGVRVALIANETGTDTQWVAFPTHD 186 Query 181 QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI 240 Q+ERA FDMVVAGR+V DVAIMMVEAEATE +ELV+GGA APTE VVA GLEAAKPFI Sbjct 187 QLERAAFDMVVAGRVVGDDVAIMMVEAEATEKTIELVDGGANAPTEDVVADGLEAAKPFI 246 Query 241 AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ 300 +LC AQQ+LAD A K PT D+PVFP Y D +V+ ELA ALTI GK ER+ Sbjct 247 RSLCVAQQQLADVAAK---PTADYPVFPAYQPDALEAVTEAVEQELAQALTIAGKQERET 303 Query 301 RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA 360 R DEIK V+++L + + GRE E+G A RAL KKL+R+RILTD RIDGRG+TDIR LSA Sbjct 304 RTDEIKASVLEKLGERFTGRESELGNAFRALNKKLIRRRILTDQVRIDGRGLTDIRPLSA 363 Query 361 EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE 420 EV V+PRAHGSALFERGETQILGVTTL+M++M Q IDSLGPETSKRY+HHYNFPPFSTGE Sbjct 364 EVEVIPRAHGSALFERGETQILGVTTLNMLRMEQTIDSLGPETSKRYLHHYNFPPFSTGE 423 Query 421 TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA 480 TGRVGSPKRREIGHGALAERAL+PVLP EEFPYAIRQVSEALGSNGSTSMGSVCAST++ Sbjct 424 TGRVGSPKRREIGHGALAERALLPVLPDREEFPYAIRQVSEALGSNGSTSMGSVCASTMS 483 Query 481 LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG 540 LLNAGVPLKAPVAGIAMGLVSD+ VDG + R+V LTDILGAEDAFGDMDFKVAG Sbjct 484 LLNAGVPLKAPVAGIAMGLVSDE------VDG--QTRYVALTDILGAEDAFGDMDFKVAG 535 Query 541 TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI 600 TKDFVTALQLDTKLDGIPS+VLA AL QAKDARLTILEV+ EAID PDEMS YAPRVT + Sbjct 536 TKDFVTALQLDTKLDGIPSEVLAAALSQAKDARLTILEVIGEAIDGPDEMSKYAPRVTAV 595 Query 601 KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP 660 KVPVDKIGEVIGPKGK+IN+ITE+TGA ISIEDDGT++VGA DGPSA+ AI INAIANP Sbjct 596 KVPVDKIGEVIGPKGKMINSITEKTGADISIEDDGTIYVGANDGPSAEEAIGMINAIANP 655 Query 661 QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE 720 QLP VGERFLGTVVK FGAFVSL+PG+DGL+HISKLG GKRI KVEDV VGDK+RVE Sbjct 656 QLPKVGERFLGTVVKAAAFGAFVSLVPGKDGLIHISKLGNGKRIGKVEDVCKVGDKIRVE 715 Query 721 IADIDKRGKISLILVAD 737 + DID RGKISL+ V + Sbjct 716 VTDIDNRGKISLVPVQE 732 >gi|319950925|ref|ZP_08024802.1| polynucleotide phosphorylase/polyadenylase [Dietzia cinnamea P4] gi|319435418|gb|EFV90661.1| polynucleotide phosphorylase/polyadenylase [Dietzia cinnamea P4] Length=753 Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/757 (78%), Positives = 656/757 (87%), Gaps = 21/757 (2%) Query 1 MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK 60 ++A EI++GVFE+ ATIDNG FG R +RFETGRLA QAAG+VVAYLDDD MLLSATTA K Sbjct 4 ITAVEIEDGVFESVATIDNGDFGRREVRFETGRLAKQAAGSVVAYLDDDTMLLSATTAGK 63 Query 61 NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR 120 +PK+HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRP+F DG+R Sbjct 64 HPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFADGVR 123 Query 121 NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALID------GTWV 174 NE+Q+VVT++SLDP DLYDV+AINAASASTQL GLPFSGP+GGVRVALI G WV Sbjct 124 NEVQVVVTVMSLDPKDLYDVVAINAASASTQLSGLPFSGPVGGVRVALIPTAADPAGQWV 183 Query 175 GFPTVDQIERAVFDMVVAGRIV----EGDVAIMMVEAEATENVVELVEGGAQAPTESVVA 230 FPT +Q+E AVFDMVVAGR+V + DVAIMMVEAEAT+NV+E + GGAQAPTE VVA Sbjct 184 AFPTSEQLEGAVFDMVVAGRVVGSGDDADVAIMMVEAEATDNVIEKIAGGAQAPTEEVVA 243 Query 231 AGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAAL 290 GLEAAKPFIA LC AQQ LA AA G P +FP+FP Y +D Y +V+ VA +LA + Sbjct 244 QGLEAAKPFIAELCAAQQALATAA--PGTPR-EFPLFPPYADDAYAAVAEVAETKLAEIM 300 Query 291 TIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGR 350 I K ER+ DE+K V+ LAD + R E+GAA ++LTKK+VRQRILTDHFRIDGR Sbjct 301 RIADKQEREVATDELKASVLDELADRFADRLGEIGAAFKSLTKKIVRQRILTDHFRIDGR 360 Query 351 GITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHH 410 G+ DIRALSAEV V+PRAHGSALFERGETQI+GVTTLDM+KMAQQIDSLGPETSKRYMHH Sbjct 361 GVRDIRALSAEVEVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHH 420 Query 411 YNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS 470 YNFPP+STGETGRVGSPKRREIGHGALAERAL+PVLPSVEEFPYAIRQVSEALGSNGSTS Sbjct 421 YNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTS 480 Query 471 MGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDA 530 MGSVCASTL+LLNAGVPLKAPVAGIAMGLVSD+ VDG E R+V LTDILGAEDA Sbjct 481 MGSVCASTLSLLNAGVPLKAPVAGIAMGLVSDE------VDG--ETRYVALTDILGAEDA 532 Query 531 FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEM 590 FGDMDFKVAGT FVTALQLDTKLDGIPS+VLAGAL QA++ARLTIL+VMAEAID PDE+ Sbjct 533 FGDMDFKVAGTGMFVTALQLDTKLDGIPSEVLAGALTQAREARLTILDVMAEAIDEPDEL 592 Query 591 SPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAA 650 SP+APR+ IKVPVDKIGEVIGPKGK+IN+ITEETGA +SIEDDGTV++GATDG SAQAA Sbjct 593 SPFAPRIIAIKVPVDKIGEVIGPKGKMINSITEETGASVSIEDDGTVYIGATDGESAQAA 652 Query 651 IDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDV 710 IDKINAIANPQLP VGERFLGTVVKT FGAF+SLLPGRDGLVHISKLG GKR+ KVEDV Sbjct 653 IDKINAIANPQLPKVGERFLGTVVKTAPFGAFLSLLPGRDGLVHISKLGGGKRVGKVEDV 712 Query 711 VNVGDKLRVEIADIDKRGKISLILVADEDSTAAATDA 747 VNVGDK++VEIADID RGKISL+ V ++ + DA Sbjct 713 VNVGDKMQVEIADIDNRGKISLVPVGEDSDNGSDADA 749 >gi|284992338|ref|YP_003410892.1| polyribonucleotide nucleotidyltransferase [Geodermatophilus obscurus DSM 43160] gi|284065583|gb|ADB76521.1| polyribonucleotide nucleotidyltransferase [Geodermatophilus obscurus DSM 43160] Length=762 Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 564/737 (77%), Positives = 624/737 (85%), Gaps = 15/737 (2%) Query 2 SAAEID--EGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTAS 59 +AAE D +GV TA IDNGSFG+RTI FETGRLA QAAG+VV + D MLLSATTA Sbjct 11 AAAEFDPEDGVTTATAVIDNGSFGSRTITFETGRLAKQAAGSVVVTMGD-TMLLSATTAG 69 Query 60 KNPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGL 119 + PKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPS DAILTCRLIDRPLRP+F GL Sbjct 70 RQPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPTFAKGL 129 Query 120 RNEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTV 179 RNE+Q+V+T+LSLDP LYDVLAIN ASASTQL GLPFSGP+GG RVAL++G WVGFPT Sbjct 130 RNEVQVVITVLSLDPDHLYDVLAINGASASTQLSGLPFSGPVGGTRVALVNGQWVGFPTH 189 Query 180 DQIERAVFDMVVAGRIV-EGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKP 238 ++E AVFDMVVAGR++ +GDVAIMMVEAEATE +ELV GGA APTE VVA GLEAAKP Sbjct 190 AELEDAVFDMVVAGRVLPDGDVAIMMVEAEATEKTIELVAGGATAPTEEVVAQGLEAAKP 249 Query 239 FIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAER 298 FI ALC AQ LA+ K+ KP DFP F DY +DVY +V S A LA I GK ER Sbjct 250 FIKALCEAQSALAE---KAAKPVADFPRFLDYQDDVYAAVESHAGARLAEVQAIAGKQER 306 Query 299 DQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRAL 358 + DE+K V LA +EGREKEV AA RALTKK+VRQRIL D RIDGRG+TDIR L Sbjct 307 NDATDELKDGTVAALAGRFEGREKEVSAAFRALTKKVVRQRILRDKVRIDGRGLTDIRPL 366 Query 359 SAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFST 418 SAEV V+PR HGSALFERGETQILGVTTL+M++M QQ+D+L P KRYMH+YNFPP+ST Sbjct 367 SAEVEVLPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVNRKRYMHNYNFPPYST 426 Query 419 GETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAST 478 GETGRVGSPKRREIGHGALAERAL+PVLP EEFPYAIRQVSEALGSNGSTSMGSVCAST Sbjct 427 GETGRVGSPKRREIGHGALAERALLPVLPDREEFPYAIRQVSEALGSNGSTSMGSVCAST 486 Query 479 LALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKV 538 LALLNAGVPL+APVAGIAMGLVSD+ VDG E +V LTDILGAEDAFGDMDFKV Sbjct 487 LALLNAGVPLRAPVAGIAMGLVSDE------VDGKTE--YVALTDILGAEDAFGDMDFKV 538 Query 539 AGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVT 598 AGT+DFVTALQLDTKLDGIPS VLA AL QA+ ARL IL+VM EAID PDEMSPYAPRVT Sbjct 539 AGTRDFVTALQLDTKLDGIPSDVLAQALTQARAARLHILDVMNEAIDAPDEMSPYAPRVT 598 Query 599 TIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIA 658 T+++PVDKIG VIGPKG++INAI +ETGA I+IEDDGT++VGA+DGPSAQAA+D+INAIA Sbjct 599 TVRIPVDKIGAVIGPKGQMINAIQDETGADITIEDDGTIYVGASDGPSAQAAVDRINAIA 658 Query 659 NPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLR 718 NPQ+P VGERFLGTVVKTT FGAFVSLLPG+DGLVHISKLG GKRI KVEDVVNVGDKL+ Sbjct 659 NPQMPKVGERFLGTVVKTTPFGAFVSLLPGKDGLVHISKLGGGKRIGKVEDVVNVGDKLQ 718 Query 719 VEIADIDKRGKISLILV 735 VEI DID RGKISL+ V Sbjct 719 VEITDIDARGKISLVPV 735 >gi|258652431|ref|YP_003201587.1| polynucleotide phosphorylase/polyadenylase [Nakamurella multipartita DSM 44233] gi|258555656|gb|ACV78598.1| guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase [Nakamurella multipartita DSM 44233] Length=750 Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/722 (77%), Positives = 619/722 (86%), Gaps = 6/722 (0%) Query 14 TATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFFPLTV 73 TA +DNGSFGTRT+RFETGRLA QAAGAV AYLDDD MLLSAT+ K+PKE FDFFPLT+ Sbjct 10 TAVLDNGSFGTRTVRFETGRLAQQAAGAVAAYLDDDTMLLSATSVGKHPKEQFDFFPLTI 69 Query 74 DVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTILSLD 133 DVEERMYAAGRIPGSFFRREGRPS DAILTCRLIDRPLRP+F +GLRNE+Q+V+T+++L+ Sbjct 70 DVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPTFTNGLRNEVQVVITVMALN 129 Query 134 PGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDMVVAG 193 P DLYDVLAINAASASTQ+ GLPFSGP+ GVRVALIDG WV FP ++ERAVFDMVVAG Sbjct 130 PDDLYDVLAINAASASTQISGLPFSGPVAGVRVALIDGQWVAFPRHSELERAVFDMVVAG 189 Query 194 RIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQELADA 253 R+ DVAIMMVEAEAT V LV GGA APTE VVA GLEAAKPF+ LC AQ EL Sbjct 190 RLAGDDVAIMMVEAEATTATVGLVAGGAVAPTEEVVAEGLEAAKPFLRVLCQAQNEL--- 246 Query 254 AGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQVVQRL 313 AGKS KP +FP+FP Y ED + +V +VA+DELA ALTI GK +RD +D +K +V ++L Sbjct 247 AGKSAKPVAEFPLFPAYQEDAFAAVENVASDELAQALTIAGKQDRDAAVDAVKARVYEQL 306 Query 314 ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAHGSAL 373 + T+ GRE E+G A R++TKKLVRQR+L D RIDGRG+TDIR L AEV +PR HGSAL Sbjct 307 SATFAGRESELGNAFRSVTKKLVRQRVLKDKVRIDGRGLTDIRTLGAEVGYLPRVHGSAL 366 Query 374 FERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKRREIG 433 FERGETQILGVTTL+M++M QQ+D+L PE KRYMH+YNFPP+STGETGRVGSPKRREIG Sbjct 367 FERGETQILGVTTLNMLRMEQQLDTLAPENRKRYMHNYNFPPYSTGETGRVGSPKRREIG 426 Query 434 HGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLKAPVA 493 HGALAERALVPVLP+ EEFPYAIRQVSEALGSNGSTSMGSVCASTL+LLNAGVPLKA VA Sbjct 427 HGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLKAAVA 486 Query 494 GIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTK 553 GIAMGLVSD + E DG ++V LTDILGAEDAFGDMDFKVAGT+ FVTALQLDTK Sbjct 487 GIAMGLVSDTVTAE---DGTSSVQYVALTDILGAEDAFGDMDFKVAGTRQFVTALQLDTK 543 Query 554 LDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGEVIGP 613 LDGIPS+VL GAL QA+DAR TIL+VM EAID PD MS APR+TTIKVPVDKIGEVIGP Sbjct 544 LDGIPSEVLRGALVQARDARFTILDVMHEAIDAPDPMSENAPRITTIKVPVDKIGEVIGP 603 Query 614 KGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLGTV 673 KGK+IN+ITE+TGA I+IEDDGT+FV DG + QAAID IN+IANPQLP VGERFLGTV Sbjct 604 KGKMINSITEQTGADIAIEDDGTIFVSGPDGGAVQAAIDIINSIANPQLPKVGERFLGTV 663 Query 674 VKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGKISLI 733 VKTT FGAFVSLLPGRDGLVHISKLG GKRIAKVEDVVNVGDKL+VEI +ID RGKISL+ Sbjct 664 VKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVNVGDKLQVEIVEIDARGKISLV 723 Query 734 LV 735 V Sbjct 724 PV 725 >gi|329936628|ref|ZP_08286335.1| guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase [Streptomyces griseoaurantiacus M045] gi|329303858|gb|EGG47741.1| guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase [Streptomyces griseoaurantiacus M045] Length=740 Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/731 (74%), Positives = 620/731 (85%), Gaps = 15/731 (2%) Query 15 ATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFFPLTVD 74 A IDNGSFGTRTIRFETGRLA QAAG+ VAYLDDD M+LSATTASKNPK+ DFFPLTVD Sbjct 10 AVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQLDFFPLTVD 69 Query 75 VEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTILSLDP 134 VEERMYAAG+IPGSFFRREGRPS DAILTCRLIDRPLRPSF GLRNEIQ+V TI++L+P Sbjct 70 VEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFAKGLRNEIQVVETIMALNP 129 Query 135 GDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDMVVAGR 194 LYDV+AINAASASTQL GLPFSGPIGG RVALI+G WV FPT ++E AVFDMVVAGR Sbjct 130 DHLYDVVAINAASASTQLAGLPFSGPIGGTRVALINGQWVAFPTHTELEDAVFDMVVAGR 189 Query 195 IVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQELADA 253 ++E GDVAIMMVEAEATE ++L++GGA+APTE VVAAGLEAAKPFI LC AQ +D Sbjct 190 VLEDGDVAIMMVEAEATEKTIQLIKGGAEAPTEEVVAAGLEAAKPFIKVLCKAQ---SDL 246 Query 254 AGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQVVQRL 313 A K+ KPT +FP+F DY +DV +++ ELA ALTI GK ER+ +D +K ++L Sbjct 247 AAKAAKPTGEFPIFLDYQDDVLEALTGAVRPELAQALTIAGKQEREAELDRVKGLAAEKL 306 Query 314 ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAHGSAL 373 +EGREKE+ AA RALTK LVR+R++ + RIDGRG+TDIR L+AEV +PR HGSAL Sbjct 307 LPEFEGREKEISAAYRALTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPRVHGSAL 366 Query 374 FERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKRREIG 433 FERGETQILGVTTL+M++M QQ+D+L P T KRYMH+YNFPPFS GETGRVGSPKRREIG Sbjct 367 FERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPFSVGETGRVGSPKRREIG 426 Query 434 HGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLKAPVA 493 HGALAERALVPVLP+ EEFPYAIRQVSEALGSNGSTSMGSVCAST++LLNAGVPLKAPVA Sbjct 427 HGALAERALVPVLPAREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLKAPVA 486 Query 494 GIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTK 553 GIAMGL+S +I EG E +VTLTDILGAEDAFGDMDFKVAGTK+FVTALQLDTK Sbjct 487 GIAMGLISQEI--EG------ETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTK 538 Query 554 LDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGEVIGP 613 L+GIP+ VLA AL+QA+DARL IL+VM EAIDRPDEMSP APR+ T+K+PVDKIGEVIGP Sbjct 539 LNGIPASVLAAALKQARDARLHILDVMMEAIDRPDEMSPNAPRIITVKIPVDKIGEVIGP 598 Query 614 KGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLGTV 673 KGK+IN I E+TGA+I+IEDDGT+++GA DGPSA+AA IN IANP +P VGER+LGTV Sbjct 599 KGKMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTV 658 Query 674 VKTTDFGAFVSLLPGRDGLVHIS---KLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGKI 730 VKTT FGAFVSLLPG+DGL+HIS KL GKR+ VEDV+ VG K++VEIA+ID RGK+ Sbjct 659 VKTTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKL 718 Query 731 SLILVADEDST 741 SLI V +E+ + Sbjct 719 SLIPVLEEEES 729 >gi|294631766|ref|ZP_06710326.1| polyribonucleotide nucleotidyltransferase [Streptomyces sp. e14] gi|292835099|gb|EFF93448.1| polyribonucleotide nucleotidyltransferase [Streptomyces sp. e14] Length=740 Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/725 (74%), Positives = 620/725 (86%), Gaps = 15/725 (2%) Query 15 ATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFFPLTVD 74 A IDNGSFGTRTIRFETGRLA QAAG+ VAYLDDD M+LSATTASKNPK+ DFFPLTVD Sbjct 11 AVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQLDFFPLTVD 70 Query 75 VEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTILSLDP 134 VEERMYAAG+IPGSFFRREGRPS DAILTCRLIDRPLRPSF GLRNEIQ+V T+++L+P Sbjct 71 VEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQVVCTVMALNP 130 Query 135 GDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDMVVAGR 194 LYDV+AINAASASTQL GLPFSGPIGGVRVALI+G WV FPT ++E AVFDMVVAGR Sbjct 131 DHLYDVVAINAASASTQLAGLPFSGPIGGVRVALINGQWVAFPTHTELEDAVFDMVVAGR 190 Query 195 IVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQELADA 253 ++E GDVAIMMVEAEATE ++LV+GGA+APTE VVAAGLEAAKPFI LC AQ +D Sbjct 191 VLEDGDVAIMMVEAEATEKTIQLVKGGAEAPTEEVVAAGLEAAKPFIKVLCKAQ---SDL 247 Query 254 AGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQVVQRL 313 A K+ KPT +FP+F DY +DV ++++ ELA ALTI GK ER+ +D +K ++L Sbjct 248 AAKAAKPTGEFPIFLDYQDDVLEALTAAVRPELAQALTIAGKQEREAELDRVKGLAAEKL 307 Query 314 ADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAHGSAL 373 +EGREKE+ AA RALTK+LVR+R++ + RIDGRG+TDIR L+AEV +PR HGSAL Sbjct 308 LPEFEGREKEISAAYRALTKQLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPRVHGSAL 367 Query 374 FERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKRREIG 433 FERGETQILGVTTL+M++M QQ+D+L P T KRYMH+YNFPP+STGETGRVGSPKRREIG Sbjct 368 FERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSPKRREIG 427 Query 434 HGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLKAPVA 493 HGALAERALVPVLP+ EEFPYAIRQVSEALGSNGSTSMGSVCAST++LLNAGVPLKAPVA Sbjct 428 HGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLKAPVA 487 Query 494 GIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTK 553 GIAMGL+S +I EG E +VTLTDILGAEDAFGDMDFKVAGTK+FVTALQLDTK Sbjct 488 GIAMGLISQEI--EG------ETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTK 539 Query 554 LDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGEVIGP 613 LDGIP+ VLA AL+QA+DARL IL+VM EAID PDEMSP APR+ T+K+PVDKIGEVIGP Sbjct 540 LDGIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGP 599 Query 614 KGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLGTV 673 KGK+IN I E+TGA+I+IEDDGT+++GA DGPSA+AA IN+IANP +P VGER+LGTV Sbjct 600 KGKMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINSIANPTMPEVGERYLGTV 659 Query 674 VKTTDFGAFVSLLPGRDGLVHIS---KLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGKI 730 VKTT FGAFVSLLPG+DGL+HIS KL GKR+ VEDV+ VG K++VEIA+ID RGK+ Sbjct 660 VKTTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKL 719 Query 731 SLILV 735 SL+ V Sbjct 720 SLVPV 724 >gi|256396976|ref|YP_003118540.1| polynucleotide phosphorylase/polyadenylase [Catenulispora acidiphila DSM 44928] gi|256363202|gb|ACU76699.1| guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase [Catenulispora acidiphila DSM 44928] Length=737 Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 546/747 (74%), Positives = 628/747 (85%), Gaps = 16/747 (2%) Query 6 IDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEH 65 + EGVF T A IDNG FG RT+RFETGRLA QAAG+VVAYLD++ M+LSATTASK+PK+ Sbjct 1 MSEGVFTTEAVIDNGPFGQRTVRFETGRLARQAAGSVVAYLDEETMVLSATTASKSPKDS 60 Query 66 FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQI 125 DFFPLTVDVEERMYA GRIPGSFFRREGRPS DAILTCRLIDRPLRPSF GLRNE+Q+ Sbjct 61 LDFFPLTVDVEERMYAVGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFAKGLRNEVQV 120 Query 126 VVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERA 185 V TI++L+P LYDV+AINAASASTQL GLPFSGPIGGVRVALI WV FPT ++ A Sbjct 121 VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIQDRWVAFPTHTELADA 180 Query 186 VFDMVVAGRIVE-GDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALC 244 VFDMVVAGR +E GDVAIMMVEAEAT V LV GG+ APTE VVA GLEAAKPFI ALC Sbjct 181 VFDMVVAGRTLEDGDVAIMMVEAEATSQTVSLVAGGSTAPTEEVVADGLEAAKPFIKALC 240 Query 245 TAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDE 304 AQQELA A K+ T +FP F DY +DV +VS+ A +EL+ ALTI GK ER++ +D Sbjct 241 VAQQELASQAAKA---TAEFPRFLDYQDDVLEAVSATAKNELSNALTIAGKHEREEELDR 297 Query 305 IKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAV 364 +K VV++LA +EGREKE+G A RALTKKLVR+RI+ D RIDGRG+ DIR LSAEV V Sbjct 298 VKALVVEKLAQQFEGREKEIGGAFRALTKKLVRERIIRDQVRIDGRGVRDIRPLSAEVEV 357 Query 365 VPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRV 424 VPR HGSALFERGETQILG+TTL+M++M QQ+D+L PET KRYMH+YNFPP+STGETGRV Sbjct 358 VPRVHGSALFERGETQILGITTLNMLRMEQQLDTLNPETRKRYMHNYNFPPYSTGETGRV 417 Query 425 GSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNA 484 GSPKRREIGHGALAERALVPVLP+ EEFPYAIRQVSEAL SNGSTSMGSVCAST++LLNA Sbjct 418 GSPKRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNA 477 Query 485 GVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDF 544 GVPLKAPVAGIAMGLVS +I DG E +V LTDILGAEDAFGDMDFKVAGTK+F Sbjct 478 GVPLKAPVAGIAMGLVSAEI------DGKTE--YVALTDILGAEDAFGDMDFKVAGTKEF 529 Query 545 VTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPV 604 VTALQLDTKLDGIP+ VLA AL+QAKDARL IL+VM EAID PDEMS +APR+ ++K+PV Sbjct 530 VTALQLDTKLDGIPASVLAAALKQAKDARLHILDVMMEAIDVPDEMSEFAPRIISVKIPV 589 Query 605 DKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPT 664 DKIGEVIGPKGK+IN I E+TGA+I+IEDDGT+++GA++G +A+AA IN IANP +P Sbjct 590 DKIGEVIGPKGKMINQIQEDTGAEITIEDDGTIYIGASNGAAAEAARVTINQIANPTMPE 649 Query 665 VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGK---GKRIAKVEDVVNVGDKLRVEI 721 VGER+LGTVVKTT FGAFVSL+PGRDGL+H+S+L K GKR+ VEDVV VGDKL+VEI Sbjct 650 VGERYLGTVVKTTTFGAFVSLMPGRDGLLHVSQLKKLAGGKRVENVEDVVKVGDKLQVEI 709 Query 722 ADIDKRGKISLI-LVADEDSTAAATDA 747 A+ID RGK+SLI ++ DE+S A A Sbjct 710 AEIDSRGKLSLIPVLPDEESKPAEAKA 736 Lambda K H 0.317 0.135 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1791397755696 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40