BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2788
Length=228
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609925|ref|NP_217304.1| transcriptional repressor SIRR [Myc... 457 5e-127
gi|340627790|ref|YP_004746242.1| putative transcriptional repres... 456 1e-126
gi|31793964|ref|NP_856457.1| transcriptional repressor SIRR [Myc... 454 3e-126
gi|289448446|ref|ZP_06438190.1| transcriptional repressor sirR [... 454 4e-126
gi|306780971|ref|ZP_07419308.1| transcriptional repressor sirR [... 454 6e-126
gi|183981933|ref|YP_001850224.1| transcriptional repressor SirR ... 416 1e-114
gi|118617700|ref|YP_906032.1| transcriptional repressor SirR [My... 413 1e-113
gi|240171312|ref|ZP_04749971.1| transcriptional repressor SirR [... 407 7e-112
gi|296171642|ref|ZP_06852856.1| iron repressor protein [Mycobact... 402 2e-110
gi|342858344|ref|ZP_08714999.1| iron repressor protein [Mycobact... 400 7e-110
gi|254821338|ref|ZP_05226339.1| iron repressor protein [Mycobact... 398 4e-109
gi|118465260|ref|YP_882856.1| iron repressor protein [Mycobacter... 395 3e-108
gi|145224606|ref|YP_001135284.1| iron dependent repressor [Mycob... 382 3e-104
gi|315444937|ref|YP_004077816.1| Mn-dependent transcriptional re... 380 9e-104
gi|120403338|ref|YP_953167.1| iron dependent repressor [Mycobact... 377 1e-102
gi|108799064|ref|YP_639261.1| DtxR family iron dependent repress... 374 4e-102
gi|333991179|ref|YP_004523793.1| transcriptional repressor SirR ... 372 2e-101
gi|118473748|ref|YP_886989.1| iron repressor protein [Mycobacter... 371 4e-101
gi|169630192|ref|YP_001703841.1| iron dependent transcriptional ... 355 2e-96
gi|289758915|ref|ZP_06518293.1| LOW QUALITY PROTEIN: transcripti... 338 5e-91
gi|312139338|ref|YP_004006674.1| dtxr-like transcriptional regul... 335 3e-90
gi|325672783|ref|ZP_08152479.1| iron repressor protein [Rhodococ... 335 4e-90
gi|54026022|ref|YP_120264.1| putative transcriptional regulator ... 329 2e-88
gi|226366100|ref|YP_002783883.1| DtxR family transcriptional reg... 321 4e-86
gi|111023611|ref|YP_706583.1| Fe(2+)-dependent transcriptional r... 320 7e-86
gi|226306128|ref|YP_002766088.1| DtxR family transcriptional reg... 318 3e-85
gi|229490782|ref|ZP_04384617.1| iron repressor protein [Rhodococ... 318 6e-85
gi|296139446|ref|YP_003646689.1| DtxR family iron (metal) depend... 308 3e-82
gi|333919300|ref|YP_004492881.1| putative Fe(2+)-dependent trans... 305 3e-81
gi|343927045|ref|ZP_08766533.1| putative DtxR family transcripti... 304 8e-81
gi|262202094|ref|YP_003273302.1| iron dependent repressor [Gordo... 299 3e-79
gi|317507387|ref|ZP_07965122.1| iron dependent repressor protein... 296 1e-78
gi|326382953|ref|ZP_08204643.1| iron dependent repressor [Gordon... 293 2e-77
gi|269794641|ref|YP_003314096.1| Mn-dependent transcriptional re... 291 7e-77
gi|296393959|ref|YP_003658843.1| DtxR family iron (metal) depend... 283 1e-74
gi|332670882|ref|YP_004453890.1| DtxR family iron (metal) depend... 276 2e-72
gi|334337483|ref|YP_004542635.1| iron (metal) dependent represso... 275 5e-72
gi|41408993|ref|NP_961829.1| hypothetical protein MAP2895 [Mycob... 266 1e-69
gi|289444336|ref|ZP_06434080.1| transcriptional repressor sirR [... 260 9e-68
gi|152964950|ref|YP_001360734.1| iron dependent repressor [Kineo... 258 4e-67
gi|256832794|ref|YP_003161521.1| iron (metal) dependent represso... 257 9e-67
gi|116662114|ref|YP_829169.1| DtxR family iron dependent repress... 254 5e-66
gi|50954157|ref|YP_061445.1| DtxR family iron dependent represso... 253 2e-65
gi|296130076|ref|YP_003637326.1| iron (metal) dependent represso... 252 3e-65
gi|336320327|ref|YP_004600295.1| DtxR family iron (metal) depend... 251 8e-65
gi|229819886|ref|YP_002881412.1| iron (metal) dependent represso... 248 7e-64
gi|220913136|ref|YP_002488445.1| DtxR family iron (metal) depend... 240 1e-61
gi|119963034|ref|YP_948365.1| Iron dependent repressor [Arthroba... 235 4e-60
gi|325963878|ref|YP_004241784.1| Mn-dependent transcriptional re... 234 6e-60
gi|163840121|ref|YP_001624526.1| iron dependent repressor [Renib... 233 2e-59
>gi|15609925|ref|NP_217304.1| transcriptional repressor SIRR [Mycobacterium tuberculosis H37Rv]
gi|15842326|ref|NP_337363.1| iron repressor protein [Mycobacterium tuberculosis CDC1551]
gi|148662630|ref|YP_001284153.1| iron repressor protein [Mycobacterium tuberculosis H37Ra]
41 more sequence titles
Length=228
Score = 457 bits (1176), Expect = 5e-127, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA
Sbjct 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS
Sbjct 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
>gi|340627790|ref|YP_004746242.1| putative transcriptional repressor SIRR [Mycobacterium canettii
CIPT 140010059]
gi|340005980|emb|CCC45147.1| putative transcriptional repressor SIRR [Mycobacterium canettii
CIPT 140010059]
Length=228
Score = 456 bits (1173), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA
Sbjct 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
SIGISLDSRLRVLARREFAGMISVAIDSA+GATVDLGSPAAQAIWVVS
Sbjct 181 SIGISLDSRLRVLARREFAGMISVAIDSAEGATVDLGSPAAQAIWVVS 228
>gi|31793964|ref|NP_856457.1| transcriptional repressor SIRR [Mycobacterium bovis AF2122/97]
gi|121638668|ref|YP_978892.1| putative transcriptional repressor sirR [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224991160|ref|YP_002645849.1| putative transcriptional repressor [Mycobacterium bovis BCG str.
Tokyo 172]
gi|31619558|emb|CAD94996.1| PROBABLE TRANSCRIPTIONAL REPRESSOR SIRR [Mycobacterium bovis
AF2122/97]
gi|121494316|emb|CAL72794.1| Probable transcriptional repressor sirR [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774275|dbj|BAH27081.1| putative transcriptional repressor [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602706|emb|CCC65382.1| probable transcriptional repressor sirR [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=228
Score = 454 bits (1169), Expect = 3e-126, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHG PIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA
Sbjct 121 ARIDAKLGFPQRDPHGAPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS
Sbjct 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
>gi|289448446|ref|ZP_06438190.1| transcriptional repressor sirR [Mycobacterium tuberculosis CPHL_A]
gi|289421404|gb|EFD18605.1| transcriptional repressor sirR [Mycobacterium tuberculosis CPHL_A]
Length=228
Score = 454 bits (1168), Expect = 4e-126, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEP DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPDDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA
Sbjct 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS
Sbjct 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
>gi|306780971|ref|ZP_07419308.1| transcriptional repressor sirR [Mycobacterium tuberculosis SUMu002]
gi|306785599|ref|ZP_07423921.1| transcriptional repressor sirR [Mycobacterium tuberculosis SUMu003]
gi|306790194|ref|ZP_07428516.1| transcriptional repressor sirR [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=228
Score = 454 bits (1167), Expect = 6e-126, Method: Compositional matrix adjust.
Identities = 226/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHGDPIPGADGQVPT PARQLWACRDGDTGTVARISDADPQMLRYFA
Sbjct 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTLPARQLWACRDGDTGTVARISDADPQMLRYFA 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS
Sbjct 181 SIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
>gi|183981933|ref|YP_001850224.1| transcriptional repressor SirR [Mycobacterium marinum M]
gi|183175259|gb|ACC40369.1| transcriptional repressor SirR [Mycobacterium marinum M]
Length=230
Score = 416 bits (1069), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 205/230 (90%), Positives = 221/230 (97%), Gaps = 2/230 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPG L+ VAQDYLKVIWTAQEWS+++VSTKMLAE+IGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGGLTTVAQDYLKVIWTAQEWSRERVSTKMLAEKIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVSDRL+
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVSDRLV 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFP+RDPHGDPIP +DGQVPTPPARQLWACRDGDT TVARISDADP+MLRYF
Sbjct 121 ARIDAKLGFPRRDPHGDPIPASDGQVPTPPARQLWACRDGDTATVARISDADPEMLRYFD 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGA--TVDLGSPAAQAIWVVS 228
S+GI+LDS+LRVL RREFAGMISVAI+SADGA TVDLGSPAA+AIWVV+
Sbjct 181 SVGINLDSQLRVLTRREFAGMISVAIESADGAANTVDLGSPAARAIWVVA 230
>gi|118617700|ref|YP_906032.1| transcriptional repressor SirR [Mycobacterium ulcerans Agy99]
gi|118569810|gb|ABL04561.1| transcriptional repressor SirR [Mycobacterium ulcerans Agy99]
Length=230
Score = 413 bits (1061), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 203/230 (89%), Positives = 220/230 (96%), Gaps = 2/230 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPG L+ VAQDYLKVIWTAQEWS+++VSTKMLAE+IGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGGLTTVAQDYLKVIWTAQEWSRERVSTKMLAEKIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVSDRL+
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVSDRLV 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
RIDAKLGFP+RDPHGDPIP +DGQVPTPPARQLWACRDGDT TVARISDADP++LRYF
Sbjct 121 TRIDAKLGFPRRDPHGDPIPSSDGQVPTPPARQLWACRDGDTATVARISDADPEILRYFD 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGA--TVDLGSPAAQAIWVVS 228
S+GI+LDS+LRVL RREFAGMISVAI+SADGA TVDLGSPAA+AIWVV+
Sbjct 181 SVGINLDSQLRVLTRREFAGMISVAIESADGAANTVDLGSPAARAIWVVA 230
>gi|240171312|ref|ZP_04749971.1| transcriptional repressor SirR [Mycobacterium kansasii ATCC 12478]
Length=230
Score = 407 bits (1046), Expect = 7e-112, Method: Compositional matrix adjust.
Identities = 201/230 (88%), Positives = 215/230 (94%), Gaps = 2/230 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPG L+ VAQDYLKVIW AQEWS +KVSTKMLAE+IGVSASTASESIR+LAEQGL
Sbjct 1 MRADEEPGGLTTVAQDYLKVIWKAQEWSLEKVSTKMLAEKIGVSASTASESIRRLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLT+ GRRAALAMVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVSDRL+
Sbjct 61 VDHEKYGAVTLTEVGRRAALAMVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVSDRLV 120
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
ARIDAKLGFPQRDPHGDPIP +DGQVPTPPARQLW CRDGDTGTVARISDADP+MLRYF
Sbjct 121 ARIDAKLGFPQRDPHGDPIPASDGQVPTPPARQLWECRDGDTGTVARISDADPEMLRYFD 180
Query 181 SIGISLDSRLRVLARREFAGMISVAIDSADGA--TVDLGSPAAQAIWVVS 228
S+GISLDSRLRV+ RREFAGMISV I+S DGA VDLGSPAA+AIWVV+
Sbjct 181 SVGISLDSRLRVVTRREFAGMISVTIESGDGAPTPVDLGSPAARAIWVVA 230
>gi|296171642|ref|ZP_06852856.1| iron repressor protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894003|gb|EFG73766.1| iron repressor protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=237
Score = 402 bits (1033), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 203/233 (88%), Positives = 214/233 (92%), Gaps = 6/233 (2%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQ----DKVSTKMLAERIGVSASTASESIRKLA 56
VRADEE G L+AV QDYLKVIW AQEWS KVSTKMLAE+IGVSASTASESIRKLA
Sbjct 4 VRADEERGGLTAVGQDYLKVIWNAQEWSPKDAPQKVSTKMLAEKIGVSASTASESIRKLA 63
Query 57 EQGLVDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVS 116
EQGLVDHEKYGAVTLT++GRRAALAMVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVS
Sbjct 64 EQGLVDHEKYGAVTLTEAGRRAALAMVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVS 123
Query 117 DRLMARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQML 176
DRL+ARIDAKLGFPQRDPHGDPIP +DGQVPTPPARQLWAC DGD GTVARISDADP+ML
Sbjct 124 DRLVARIDAKLGFPQRDPHGDPIPASDGQVPTPPARQLWACGDGDAGTVARISDADPEML 183
Query 177 RYFASIGISLDSRLRVLARREFAGMISVAIDSADG--ATVDLGSPAAQAIWVV 227
RYFA +GI+LDSRLRVLARREFAGMISVAI+S DG TVDLGSPAA+AIWVV
Sbjct 184 RYFADVGINLDSRLRVLARREFAGMISVAIESGDGVQVTVDLGSPAARAIWVV 236
>gi|342858344|ref|ZP_08714999.1| iron repressor protein [Mycobacterium colombiense CECT 3035]
gi|342134048|gb|EGT87228.1| iron repressor protein [Mycobacterium colombiense CECT 3035]
Length=234
Score = 400 bits (1029), Expect = 7e-110, Method: Compositional matrix adjust.
Identities = 200/234 (86%), Positives = 214/234 (92%), Gaps = 6/234 (2%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQ----DKVSTKMLAERIGVSASTASESIRKLA 56
+RADEE G ++AV QDYLKVIW AQEWS KVSTKMLAE+IGVSASTASESIRKLA
Sbjct 1 MRADEEHGGITAVGQDYLKVIWNAQEWSPKDAPQKVSTKMLAEKIGVSASTASESIRKLA 60
Query 57 EQGLVDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVS 116
EQGLVDHEKYGAVTLT++GRRAALAMVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVS
Sbjct 61 EQGLVDHEKYGAVTLTEAGRRAALAMVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVS 120
Query 117 DRLMARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQML 176
DRL+ARIDAKLGFPQRDPHGDPIP +DGQVPTPPARQLWAC DGDTGTVARISDADP+ML
Sbjct 121 DRLVARIDAKLGFPQRDPHGDPIPASDGQVPTPPARQLWACDDGDTGTVARISDADPEML 180
Query 177 RYFASIGISLDSRLRVLARREFAGMISVAIDSADGA--TVDLGSPAAQAIWVVS 228
RYF +GI+LDSRLRVL RREFAGMISV+IDS DGA TVDLGSPAA+AIWV +
Sbjct 181 RYFTDVGINLDSRLRVLTRREFAGMISVSIDSGDGAETTVDLGSPAARAIWVTA 234
>gi|254821338|ref|ZP_05226339.1| iron repressor protein [Mycobacterium intracellulare ATCC 13950]
Length=230
Score = 398 bits (1022), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 196/228 (86%), Positives = 208/228 (92%), Gaps = 2/228 (0%)
Query 3 ADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVD 62
ADEE G L+AV QDYLK IW AQEWS DKVSTKMLAE+IGVSASTASESIRKLAEQGLVD
Sbjct 3 ADEERGGLTAVGQDYLKAIWNAQEWSPDKVSTKMLAEKIGVSASTASESIRKLAEQGLVD 62
Query 63 HEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMAR 122
HEKYGAVTLT++GRRAAL MVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVSDRL++R
Sbjct 63 HEKYGAVTLTEAGRRAALEMVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVSDRLVSR 122
Query 123 IDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASI 182
IDAKLGFPQRDPHGDPIP DGQVPTPPARQLWAC DGD GTVARISDADP+MLRYF +
Sbjct 123 IDAKLGFPQRDPHGDPIPATDGQVPTPPARQLWACGDGDAGTVARISDADPEMLRYFTDV 182
Query 183 GISLDSRLRVLARREFAGMISVAIDSADG--ATVDLGSPAAQAIWVVS 228
GI+LDSRLRVL RREFAGMISVAI+S DG TVDLGSPAA+AIWV +
Sbjct 183 GINLDSRLRVLTRREFAGMISVAIESGDGDETTVDLGSPAARAIWVTA 230
>gi|118465260|ref|YP_882856.1| iron repressor protein [Mycobacterium avium 104]
gi|254776114|ref|ZP_05217630.1| iron repressor protein [Mycobacterium avium subsp. avium ATCC
25291]
gi|118166547|gb|ABK67444.1| iron repressor protein [Mycobacterium avium 104]
gi|336459011|gb|EGO37963.1| Mn-dependent transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S397]
Length=234
Score = 395 bits (1015), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 198/234 (85%), Positives = 211/234 (91%), Gaps = 6/234 (2%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQD----KVSTKMLAERIGVSASTASESIRKLA 56
+RADEE G L+AV QDYLK IW AQEWS + KVSTKMLAE+IGVSASTASESIRKLA
Sbjct 1 MRADEERGGLTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLA 60
Query 57 EQGLVDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVS 116
EQGLVDHEKYGAVTLT++GRRAAL MVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVS
Sbjct 61 EQGLVDHEKYGAVTLTEAGRRAALEMVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVS 120
Query 117 DRLMARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQML 176
DRL+ARIDAKLGFPQRDPHGDPIP DGQVPTPPARQLWAC DGDTGTVARISDAD +ML
Sbjct 121 DRLVARIDAKLGFPQRDPHGDPIPATDGQVPTPPARQLWACGDGDTGTVARISDADSEML 180
Query 177 RYFASIGISLDSRLRVLARREFAGMISVAIDSADGA--TVDLGSPAAQAIWVVS 228
RYF +GI+LDSRLRVL RREFAGMISVAI+S DGA TVDLGSPAA+AIWV +
Sbjct 181 RYFTDVGINLDSRLRVLTRREFAGMISVAIESGDGAETTVDLGSPAARAIWVTA 234
>gi|145224606|ref|YP_001135284.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
gi|145217092|gb|ABP46496.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
Length=242
Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 188/234 (81%), Positives = 211/234 (91%), Gaps = 11/234 (4%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
P DLS VAQDYLKVIWTAQEWS +KVSTK+LA+RIGVSASTASESIRKLA+QGLVDHEK
Sbjct 9 NPTDLSTVAQDYLKVIWTAQEWSHEKVSTKLLADRIGVSASTASESIRKLADQGLVDHEK 68
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YGAVTLTD+GRRAALAMVRRHRL+ETFLVNELGY WDEVHDEAE+LEHAVSDR++ RIDA
Sbjct 69 YGAVTLTDAGRRAALAMVRRHRLMETFLVNELGYGWDEVHDEAEILEHAVSDRMLDRIDA 128
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLG+P RDPHGDPIP ADG+VPTPPARQL AC+DG+ GTVARISDADP+MLRYF ++GIS
Sbjct 129 KLGYPTRDPHGDPIPAADGKVPTPPARQLSACQDGEAGTVARISDADPEMLRYFDTVGIS 188
Query 186 LDSRLRVLARREFAGMISVAIDS----------ADG-ATVDLGSPAAQAIWVVS 228
LDSRLRV+ARR+FAGMISVA+++ +DG TVDLGSPAAQAIWVV+
Sbjct 189 LDSRLRVVARRDFAGMISVAVENPGSSGGSKAASDGETTVDLGSPAAQAIWVVA 242
>gi|315444937|ref|YP_004077816.1| Mn-dependent transcriptional regulator [Mycobacterium sp. Spyr1]
gi|315263240|gb|ADT99981.1| Mn-dependent transcriptional regulator [Mycobacterium sp. Spyr1]
Length=242
Score = 380 bits (976), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 187/234 (80%), Positives = 211/234 (91%), Gaps = 11/234 (4%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
P DLS VAQDYLKVIWTAQEWS +KVSTK+LA+RIGVSASTASESIRKLA+QGLVDHEK
Sbjct 9 NPTDLSTVAQDYLKVIWTAQEWSHEKVSTKLLADRIGVSASTASESIRKLADQGLVDHEK 68
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YGAVTLTD+GRRAALAMVRRHRL+ETFLVNELGY WDEVHDEAE+LEHAVSDR++ RIDA
Sbjct 69 YGAVTLTDAGRRAALAMVRRHRLMETFLVNELGYGWDEVHDEAEILEHAVSDRMLDRIDA 128
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLG+P RDPHGDPIP ADG+VPTPPARQL AC+DG+ GTVARISDADP+MLRYF ++GIS
Sbjct 129 KLGYPTRDPHGDPIPAADGKVPTPPARQLSACQDGEAGTVARISDADPEMLRYFDTVGIS 188
Query 186 LDSRLRVLARREFAGMISVAIDS----------ADG-ATVDLGSPAAQAIWVVS 228
LDSRLRV+ARR+FAGMISVA+++ +DG TVDLGSPAA+AIWVV+
Sbjct 189 LDSRLRVVARRDFAGMISVAVENPGSSGGSTAASDGETTVDLGSPAAEAIWVVA 242
>gi|120403338|ref|YP_953167.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
gi|119956156|gb|ABM13161.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
Length=248
Score = 377 bits (967), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 188/240 (79%), Positives = 210/240 (88%), Gaps = 17/240 (7%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
P DLS VAQDYLKVIWTAQEWS++KVSTK+LAERIGVSASTASESIRKLA+QGLVDHEK
Sbjct 9 NPTDLSTVAQDYLKVIWTAQEWSREKVSTKLLAERIGVSASTASESIRKLADQGLVDHEK 68
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YGAVTLT++GRRAALAMVRRHRL+ETFLVNELGY WDEVHDEAEVLEHAVSDR++ RIDA
Sbjct 69 YGAVTLTEAGRRAALAMVRRHRLMETFLVNELGYSWDEVHDEAEVLEHAVSDRMLDRIDA 128
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLG+P RDPHGDPIP ADG+VPTPPARQL C+DG+ GTVARISDADP+MLRYF ++GI+
Sbjct 129 KLGYPTRDPHGDPIPAADGRVPTPPARQLSDCQDGEAGTVARISDADPEMLRYFDAVGIN 188
Query 186 LDSRLRVLARREFAGMISVAID---------SADGA--------TVDLGSPAAQAIWVVS 228
LDSRLRV+ARR+FAGMISVAI+ + DGA TVDLGSPAAQAIWV +
Sbjct 189 LDSRLRVVARRDFAGMISVAIENPERPENPSNPDGATSGHDNETTVDLGSPAAQAIWVTA 248
>gi|108799064|ref|YP_639261.1| DtxR family iron dependent repressor [Mycobacterium sp. MCS]
gi|119868179|ref|YP_938131.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126434667|ref|YP_001070358.1| iron dependent repressor [Mycobacterium sp. JLS]
gi|108769483|gb|ABG08205.1| iron (metal) dependent repressor, DtxR family [Mycobacterium
sp. MCS]
gi|119694268|gb|ABL91341.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126234467|gb|ABN97867.1| iron dependent repressor [Mycobacterium sp. JLS]
Length=240
Score = 374 bits (961), Expect = 4e-102, Method: Compositional matrix adjust.
Identities = 187/237 (79%), Positives = 205/237 (87%), Gaps = 9/237 (3%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
V D DL+ VAQDYLK IWTAQEWS +KVSTK+LAERIGVSASTASESIRKLA+QGL
Sbjct 3 VSPDSNSRDLTTVAQDYLKTIWTAQEWSHEKVSTKLLAERIGVSASTASESIRKLADQGL 62
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
V+HEKYGAVTLTD+GR AAL MVRRHRL+ETFLVNELGY WDEVHDEAEVLEHAVSD ++
Sbjct 63 VNHEKYGAVTLTDAGRHAALQMVRRHRLMETFLVNELGYSWDEVHDEAEVLEHAVSDLML 122
Query 121 ARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFA 180
RIDAKLG P RDPHGDPIP ADG+VPTPPARQL C DGD GTVARISDADP+MLRYF
Sbjct 123 TRIDAKLGHPTRDPHGDPIPAADGRVPTPPARQLSECEDGDAGTVARISDADPEMLRYFD 182
Query 181 SIGISLDSRLRVLARREFAGMISVAID---SADGA------TVDLGSPAAQAIWVVS 228
S+GISLDSRLRVLARR+FAG+I+VA+D SADG TVDLGSPAA+AIWVV+
Sbjct 183 SVGISLDSRLRVLARRDFAGLITVAVDSPESADGGATDTETTVDLGSPAAEAIWVVA 239
>gi|333991179|ref|YP_004523793.1| transcriptional repressor SirR [Mycobacterium sp. JDM601]
gi|333487147|gb|AEF36539.1| transcriptional repressor SirR [Mycobacterium sp. JDM601]
Length=229
Score = 372 bits (956), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 183/225 (82%), Positives = 204/225 (91%), Gaps = 2/225 (0%)
Query 5 EEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHE 64
E+ L+ VAQDYLKVIWTAQEWS DKVSTKMLAE+IGVSASTASESIRKLA+ GLVDHE
Sbjct 5 EQSDGLTTVAQDYLKVIWTAQEWSPDKVSTKMLAEKIGVSASTASESIRKLADAGLVDHE 64
Query 65 KYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARID 124
KYGAV+LT+ GRRAALAMVRRHRL+ETFLV ELGY WDEVHDEAEVLEHAVSD ++ARID
Sbjct 65 KYGAVSLTEDGRRAALAMVRRHRLIETFLVRELGYSWDEVHDEAEVLEHAVSDLMIARID 124
Query 125 AKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGI 184
AKLGFPQRDPHGDPIP ADG+VPTPPARQLW C DGD+GTVARISD DP+MLRYF +GI
Sbjct 125 AKLGFPQRDPHGDPIPAADGKVPTPPARQLWECADGDSGTVARISDDDPEMLRYFDGVGI 184
Query 185 SLDSRLRVLARREFAGMISVAIDSADG--ATVDLGSPAAQAIWVV 227
SLD+R++VL RREFAG+ISVA++ +G AT+DLGSPAAQAIWVV
Sbjct 185 SLDARVQVLTRREFAGIISVALELPEGELATIDLGSPAAQAIWVV 229
>gi|118473748|ref|YP_886989.1| iron repressor protein [Mycobacterium smegmatis str. MC2 155]
gi|118175035|gb|ABK75931.1| iron repressor protein [Mycobacterium smegmatis str. MC2 155]
Length=236
Score = 371 bits (953), Expect = 4e-101, Method: Compositional matrix adjust.
Identities = 187/225 (84%), Positives = 205/225 (92%), Gaps = 6/225 (2%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
DLS+VAQDYLKVIWTAQEWS++KVSTK+LAERIGVSASTASESIRKLA+QGLV HEKYGA
Sbjct 9 DLSSVAQDYLKVIWTAQEWSREKVSTKLLAERIGVSASTASESIRKLADQGLVHHEKYGA 68
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
VTLTD+GRRAALAMVRRHRL+ETFLV ELGY WDEVHDEAE+LEHAVSDR++ RIDAKLG
Sbjct 69 VTLTDAGRRAALAMVRRHRLMETFLVQELGYGWDEVHDEAEILEHAVSDRMLDRIDAKLG 128
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
P RDPHGDPIP ADGQVPTPPARQL C+DGD GTVARISDADP+MLRYF S+GISLDS
Sbjct 129 HPTRDPHGDPIPAADGQVPTPPARQLSVCQDGDAGTVARISDADPEMLRYFDSVGISLDS 188
Query 189 RLRVLARREFAGMISVAIDS---ADG---ATVDLGSPAAQAIWVV 227
RLRV+ARR+FAG ISVAI+ +G ATVDLGSPAA+AIWVV
Sbjct 189 RLRVVARRDFAGTISVAIEDPAVPEGDPEATVDLGSPAAEAIWVV 233
>gi|169630192|ref|YP_001703841.1| iron dependent transcriptional repressor FeoA [Mycobacterium
abscessus ATCC 19977]
gi|169242159|emb|CAM63187.1| Probable iron dependent transcriptional repressor FeoA [Mycobacterium
abscessus]
Length=240
Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/223 (79%), Positives = 198/223 (89%), Gaps = 4/223 (1%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
DL+ VAQDYLKVIWTAQEWS +KVSTKMLAER+GVSASTASESIRKLA+QGLVDHEKYGA
Sbjct 16 DLTTVAQDYLKVIWTAQEWSHEKVSTKMLAERMGVSASTASESIRKLADQGLVDHEKYGA 75
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
VTLTD GR+AA+ MVRRHRLLET+LVNELGY WDEVHDEAEVLEHAVSD L+A+IDAKLG
Sbjct 76 VTLTDHGRKAAVLMVRRHRLLETYLVNELGYGWDEVHDEAEVLEHAVSDLLLAKIDAKLG 135
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
PQRDPHGDPIPG DGQVPTPPARQL C +GDTG VARISD+DP+MLRYF ++G++LD+
Sbjct 136 HPQRDPHGDPIPGPDGQVPTPPARQLSDCANGDTGVVARISDSDPEMLRYFDTVGVALDA 195
Query 189 RLRVLARREFAGMISVAIDS----ADGATVDLGSPAAQAIWVV 227
R+ V RR+FAG ISV+IDS D ++LG+PAAQ+IWVV
Sbjct 196 RVTVDERRDFAGTISVSIDSDEPGRDERKLELGNPAAQSIWVV 238
>gi|289758915|ref|ZP_06518293.1| LOW QUALITY PROTEIN: transcriptional repressor SIRR [Mycobacterium
tuberculosis T85]
gi|289714479|gb|EFD78491.1| LOW QUALITY PROTEIN: transcriptional repressor SIRR [Mycobacterium
tuberculosis T85]
Length=218
Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 63 HEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMAR 122
HEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMAR
Sbjct 53 HEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMAR 112
Query 123 IDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASI 182
IDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASI
Sbjct 113 IDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASI 172
Query 183 GISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
GISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS
Sbjct 173 GISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 218
>gi|312139338|ref|YP_004006674.1| dtxr-like transcriptional regulator [Rhodococcus equi 103S]
gi|311888677|emb|CBH47989.1| putative DtxR-like transcriptional regulator [Rhodococcus equi
103S]
Length=244
Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/224 (73%), Positives = 195/224 (88%), Gaps = 3/224 (1%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
P LS+VAQDYLKVIWT QEWS+++VSTK+L+ERIGVSAST SE+IRKL++QGLVDH +
Sbjct 22 HPETLSSVAQDYLKVIWTVQEWSRERVSTKLLSERIGVSASTVSEAIRKLSDQGLVDHAR 81
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YG++ LTD+GR AA++MVRRHRL+ETFLVNELGY WDEVHDEAEVLEHAVSDR++ RIDA
Sbjct 82 YGSIALTDAGRSAAVSMVRRHRLIETFLVNELGYGWDEVHDEAEVLEHAVSDRMIDRIDA 141
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLGFP+RDPHGDPIP ADG VPTPPARQL +DG++G VARISDADP MLRYF S+GI+
Sbjct 142 KLGFPERDPHGDPIPSADGSVPTPPARQLSDYQDGESGRVARISDADPAMLRYFDSVGIA 201
Query 186 LDSRLRVLARREFAGMISVAI--DSADGATVDLGSPAAQAIWVV 227
LD+ + V+ RR+FAG +S+ + D A G VDLG+PAAQAIW+V
Sbjct 202 LDTDITVIERRDFAGTVSIRLGTDPATG-NVDLGNPAAQAIWLV 244
>gi|325672783|ref|ZP_08152479.1| iron repressor protein [Rhodococcus equi ATCC 33707]
gi|325556660|gb|EGD26326.1| iron repressor protein [Rhodococcus equi ATCC 33707]
Length=225
Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/224 (73%), Positives = 195/224 (88%), Gaps = 3/224 (1%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
P LS+VAQDYLKVIWT QEWS+++VSTK+L+ERIGVSAST SE+IRKL++QGLVDH +
Sbjct 3 HPETLSSVAQDYLKVIWTVQEWSRERVSTKLLSERIGVSASTVSEAIRKLSDQGLVDHAR 62
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YG++ LTD+GR AA++MVRRHRL+ETFLVNELGY WDEVHDEAEVLEHAVSDR++ RIDA
Sbjct 63 YGSIALTDAGRSAAVSMVRRHRLIETFLVNELGYGWDEVHDEAEVLEHAVSDRMIDRIDA 122
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLGFP+RDPHGDPIP ADG VPTPPARQL +DG++G VARISDADP MLRYF S+GI+
Sbjct 123 KLGFPERDPHGDPIPSADGSVPTPPARQLSDYQDGESGRVARISDADPAMLRYFDSVGIA 182
Query 186 LDSRLRVLARREFAGMISVAI--DSADGATVDLGSPAAQAIWVV 227
LD+ + V+ RR+FAG +S+ + D A G VDLG+PAAQAIW+V
Sbjct 183 LDTDITVIERRDFAGTVSIRLGTDPATG-NVDLGNPAAQAIWLV 225
>gi|54026022|ref|YP_120264.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54017530|dbj|BAD58900.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=255
Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/218 (73%), Positives = 190/218 (88%), Gaps = 1/218 (0%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
+L++VAQDYLKVIWTAQEWSQ+KVSTK+LAERIGVSAST SE++RKLA+QGLV+H +YG+
Sbjct 37 ELTSVAQDYLKVIWTAQEWSQEKVSTKLLAERIGVSASTVSEAVRKLADQGLVEHARYGS 96
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
+ LTD GRRAA+AMVRRHRL+ETFLVNELGY WDEVHDEAEVLEHAVS+ LMARIDAKLG
Sbjct 97 IALTDHGRRAAVAMVRRHRLIETFLVNELGYGWDEVHDEAEVLEHAVSELLMARIDAKLG 156
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
+P RDPHGDPIP DG VPTPPARQL G +G VARISD+DP MLRYF ++G++LD+
Sbjct 157 YPDRDPHGDPIPSVDGDVPTPPARQLSDFEAGQSGRVARISDSDPDMLRYFDAVGVALDT 216
Query 189 RLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
+ V+ RR+FAG I+V I ++GA VDLG PAA+AIW+
Sbjct 217 VIEVVERRDFAGTIAVRIGGSEGA-VDLGRPAAEAIWL 253
>gi|226366100|ref|YP_002783883.1| DtxR family transcriptional regulator [Rhodococcus opacus B4]
gi|226244590|dbj|BAH54938.1| putative DtxR family transcriptional regulator [Rhodococcus opacus
B4]
Length=235
Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/222 (69%), Positives = 190/222 (86%), Gaps = 1/222 (0%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
E G LSAVAQDYLKVIWT QEWSQ++VSTK+L+E+IGVSAST SE+IRKL++QGLVDH +
Sbjct 15 ETGALSAVAQDYLKVIWTVQEWSQERVSTKLLSEKIGVSASTVSEAIRKLSDQGLVDHAR 74
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YG++ LT++GR AA+ MVRRHRL+ET+LV+ELGY WDEVHDEAEVLEHAVSD +++R+DA
Sbjct 75 YGSIALTEAGRVAAVGMVRRHRLIETYLVHELGYGWDEVHDEAEVLEHAVSDLMISRMDA 134
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLG P+RDPHGDPIP DG VPTPPARQL DG++G +ARISD+DP MLRYF S+G++
Sbjct 135 KLGHPERDPHGDPIPAVDGSVPTPPARQLSDFVDGESGRIARISDSDPAMLRYFDSVGVA 194
Query 186 LDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
LD + VL RR++AG +SV I + TV+LG+PAAQAIW+V
Sbjct 195 LDVTVTVLERRDYAGTVSVRIGVQED-TVELGNPAAQAIWMV 235
>gi|111023611|ref|YP_706583.1| Fe(2+)-dependent transcriptional regulator [Rhodococcus jostii
RHA1]
gi|110823141|gb|ABG98425.1| probable Fe(2+)-dependent transcriptional regulator [Rhodococcus
jostii RHA1]
Length=243
Score = 320 bits (821), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 151/222 (69%), Positives = 191/222 (87%), Gaps = 1/222 (0%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
E G LSAVAQDYLKVIWT QEWSQ++VSTK+L+E+IGVSAST SE+IRKL++QGLVDH +
Sbjct 23 ETGALSAVAQDYLKVIWTVQEWSQERVSTKLLSEKIGVSASTVSEAIRKLSDQGLVDHAR 82
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YG++ LT++GR AA+ MVRRHRL+ET+LV+ELGY WDEVHDEAEVLEHAVSD +++R+DA
Sbjct 83 YGSIALTEAGRVAAVGMVRRHRLIETYLVHELGYGWDEVHDEAEVLEHAVSDLMISRMDA 142
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
KLG P+RDPHGDPIP DG VPTPPARQL +G++G +ARISD+DP MLRYF S+G++
Sbjct 143 KLGHPERDPHGDPIPAVDGSVPTPPARQLSDFVNGESGRIARISDSDPAMLRYFDSVGVA 202
Query 186 LDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
LD + VL RR++AG +S+ + S D +V+LG+PAAQAIW+V
Sbjct 203 LDVTITVLERRDYAGTVSIRLGSHDD-SVELGNPAAQAIWLV 243
>gi|226306128|ref|YP_002766088.1| DtxR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226185245|dbj|BAH33349.1| putative DtxR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=248
Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/219 (70%), Positives = 187/219 (86%), Gaps = 3/219 (1%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
LS+VAQDYLKVIWT QEWS ++VSTK+L+E++ VSAST SE+IRKL++QGLVDH +YG++
Sbjct 32 LSSVAQDYLKVIWTIQEWSHERVSTKLLSEKMNVSASTVSEAIRKLSDQGLVDHARYGSI 91
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LTDSGR AA++MVRRHRL+ET+LV ELGY WDEVHDEAEVLEHAVSD +++R+DAKLGF
Sbjct 92 ALTDSGRAAAVSMVRRHRLIETYLVQELGYGWDEVHDEAEVLEHAVSDLMISRMDAKLGF 151
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P+RDPHGDPIP DG VPTPPARQL +G+ G VARISD+DP+MLRYF S+G+SLD
Sbjct 152 PERDPHGDPIPATDGSVPTPPARQLSDFANGERGRVARISDSDPEMLRYFDSVGVSLDVD 211
Query 190 LRVLARREFAGMISVAI-DSADGATVDLGSPAAQAIWVV 227
+ V RR+FAG +SV + DS D T+DLGSP AQAIW+V
Sbjct 212 ITVEERRDFAGTVSVRLGDSPD--TIDLGSPVAQAIWLV 248
>gi|229490782|ref|ZP_04384617.1| iron repressor protein [Rhodococcus erythropolis SK121]
gi|229322172|gb|EEN87958.1| iron repressor protein [Rhodococcus erythropolis SK121]
Length=248
Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/219 (70%), Positives = 187/219 (86%), Gaps = 3/219 (1%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
LS+VAQDYLKVIWT QEWS ++VSTK+L+E++ VSAST SE+IRKL++QGLVDH +YG++
Sbjct 32 LSSVAQDYLKVIWTIQEWSHERVSTKLLSEKMSVSASTVSEAIRKLSDQGLVDHARYGSI 91
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LTDSGR AA++MVRRHRL+ET+LV ELGY WDEVHDEAEVLEHAVSD +++R+DAKLGF
Sbjct 92 ALTDSGRAAAVSMVRRHRLIETYLVQELGYGWDEVHDEAEVLEHAVSDLMISRMDAKLGF 151
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P+RDPHGDPIP DG VPTPPARQL +G+ G VARISD+DP+MLRYF S+G+SLD
Sbjct 152 PERDPHGDPIPATDGSVPTPPARQLSDFANGERGRVARISDSDPEMLRYFDSVGVSLDVE 211
Query 190 LRVLARREFAGMISVAI-DSADGATVDLGSPAAQAIWVV 227
+ V RR+FAG +SV + DS + T+DLGSP AQAIW+V
Sbjct 212 ITVEERRDFAGTVSVRLGDSPN--TIDLGSPVAQAIWLV 248
>gi|296139446|ref|YP_003646689.1| DtxR family iron (metal) dependent repressor [Tsukamurella paurometabola
DSM 20162]
gi|296027580|gb|ADG78350.1| iron (metal) dependent repressor, DtxR family [Tsukamurella paurometabola
DSM 20162]
Length=232
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/219 (71%), Positives = 180/219 (83%), Gaps = 2/219 (0%)
Query 8 GDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYG 67
G+LSAV QDYLK IWTAQEW+ KVSTK LA+ +GVSASTASE+IRKLA+QGLV+H KYG
Sbjct 14 GELSAVTQDYLKQIWTAQEWADVKVSTKSLADALGVSASTASEAIRKLADQGLVNHAKYG 73
Query 68 AVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKL 127
AVTLTD GR AA AMVRRHRLLETFLV+ELGY WDEVHDEAEVLEHAVS+R +AR+D +L
Sbjct 74 AVTLTDEGRAAATAMVRRHRLLETFLVSELGYGWDEVHDEAEVLEHAVSERFLARLDERL 133
Query 128 GFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLD 187
GFP+RDPHGDPIP DG VPTP AR L G T TVARISDADP+MLRYF +GIS D
Sbjct 134 GFPERDPHGDPIPQPDGTVPTPDARLLSELDAGATCTVARISDADPEMLRYFQDVGISPD 193
Query 188 SRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
+R+ V+ R+F G ++V ++ DGA +DLG AAQ+IWV
Sbjct 194 ARIEVVELRKFLGTVAVTVN--DGAPLDLGDVAAQSIWV 230
>gi|333919300|ref|YP_004492881.1| putative Fe(2+)-dependent transcriptional regulator [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481521|gb|AEF40081.1| putative Fe(2+)-dependent transcriptional regulator [Amycolicicoccus
subflavus DQS3-9A1]
Length=262
Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/218 (68%), Positives = 180/218 (83%), Gaps = 1/218 (0%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
L+ VAQDYLK IW+ EWS ++VSTKMLAE+IGVSAST SE+I+KL EQGLVDH +YG++
Sbjct 31 LTPVAQDYLKTIWSFCEWSDERVSTKMLAEKIGVSASTVSEAIKKLGEQGLVDHARYGSI 90
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LT+ G+ AAL+MVRRHRL+ET+LV ELGY WDEVHDEAEVLEHAVS+RL+ARIDAKLG
Sbjct 91 ALTEEGKAAALSMVRRHRLIETYLVRELGYSWDEVHDEAEVLEHAVSERLIARIDAKLGH 150
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P+RDPHGDPIP ADG VP P AR L +G++G VARISD DPQMLRYF S+GI+LDS
Sbjct 151 PKRDPHGDPIPTADGSVPAPDARPLSDYDNGESGRVARISDDDPQMLRYFDSVGINLDSH 210
Query 190 LRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
+ ++ RR++AG ++V ID AD T++LGS A AIW+
Sbjct 211 IEIVERRDYAGTVAVRIDRAD-TTLELGSLATNAIWLT 247
>gi|343927045|ref|ZP_08766533.1| putative DtxR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343763103|dbj|GAA13459.1| putative DtxR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=221
Score = 304 bits (778), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/219 (69%), Positives = 176/219 (81%), Gaps = 2/219 (0%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
+LS V QDYLKVIWT+QEW KV+TK+LA+ +GVS STASE+IRKLA+QGLV HE YGA
Sbjct 3 ELSQVTQDYLKVIWTSQEWEDVKVTTKLLAQSLGVSPSTASEAIRKLADQGLVSHEPYGA 62
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
VTLTD GR AA+ MVRRHRL+ETFLV ELGYRWDEVHDEAE+LEHAVSDRLMAR+DAKLG
Sbjct 63 VTLTDHGREAAILMVRRHRLIETFLVRELGYRWDEVHDEAEILEHAVSDRLMARLDAKLG 122
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
FP RDPHGDPIP DG +PTP A L G +G +ARISD DP+MLRYF +G++LD
Sbjct 123 FPDRDPHGDPIPALDGSIPTPAAALLADLEVGASGCIARISDTDPEMLRYFDEVGVALDR 182
Query 189 RLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
+ V +R FAG ISV++D D A +DLG AA+AI+VV
Sbjct 183 VVTVAEKRPFAGTISVSLD--DAAPIDLGDIAARAIFVV 219
>gi|262202094|ref|YP_003273302.1| iron dependent repressor [Gordonia bronchialis DSM 43247]
gi|262085441|gb|ACY21409.1| iron dependent repressor [Gordonia bronchialis DSM 43247]
Length=240
Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/218 (67%), Positives = 176/218 (81%), Gaps = 2/218 (0%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
+L++V QDYLKVIWT QEW+ KV+TKMLAE++ VS STASE+IRKLA+QGLV HEKYGA
Sbjct 21 ELTSVTQDYLKVIWTTQEWADVKVTTKMLAEKLAVSPSTASEAIRKLADQGLVSHEKYGA 80
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
V+LT+ GR AA+ MVRRHRLLETFLV ELGY WDEVHDEAE+LEHAVSDRLMAR+DAKLG
Sbjct 81 VSLTEEGRTAAILMVRRHRLLETFLVRELGYGWDEVHDEAEILEHAVSDRLMARLDAKLG 140
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
P RDPHGDPIP DG VP+P R L G++G VARISD DP+MLRYF +G++LD
Sbjct 141 HPDRDPHGDPIPALDGSVPSPDLRLLSDLDSGESGRVARISDDDPEMLRYFDEVGVALDC 200
Query 189 RLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
+RV +R FAG IS+++D ++DLG AA+AI++
Sbjct 201 EVRVAEKRPFAGTISISVDG--NPSIDLGDIAARAIYL 236
>gi|317507387|ref|ZP_07965122.1| iron dependent repressor protein [Segniliparus rugosus ATCC BAA-974]
gi|316254335|gb|EFV13670.1| iron dependent repressor protein [Segniliparus rugosus ATCC BAA-974]
Length=233
Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/225 (62%), Positives = 177/225 (79%), Gaps = 0/225 (0%)
Query 3 ADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVD 62
A+ LS V QDYLKV+W QEWS D V+TK+L+E++GVSASTASE +RKL +QGLV+
Sbjct 6 ANTSSAQLSPVTQDYLKVLWNLQEWSDDPVTTKLLSEKLGVSASTASEGVRKLVDQGLVE 65
Query 63 HEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMAR 122
HE+YGAV+LT +GR A+ +VRRHRL+ETFLV EL Y WDEVHDEAE+LEHA+SDR + R
Sbjct 66 HERYGAVSLTPTGRAEAVGVVRRHRLIETFLVEELHYGWDEVHDEAEILEHAISDRFVER 125
Query 123 IDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASI 182
+DAKLG P RDPHGDPIP DG VPTP A +L +G G +ARISD DP+MLRYF S+
Sbjct 126 LDAKLGHPARDPHGDPIPRPDGSVPTPDASKLADAPEGTNGLIARISDHDPEMLRYFDSV 185
Query 183 GISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
G++LD+++ VL RR+FAG I++A+D ++LG PAA+A+W+V
Sbjct 186 GLALDAKIAVLRRRDFAGTITIALDQTGEDPIELGKPAAEAVWIV 230
>gi|326382953|ref|ZP_08204643.1| iron dependent repressor [Gordonia neofelifaecis NRRL B-59395]
gi|326198543|gb|EGD55727.1| iron dependent repressor [Gordonia neofelifaecis NRRL B-59395]
Length=226
Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/219 (66%), Positives = 176/219 (81%), Gaps = 2/219 (0%)
Query 8 GDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYG 67
+L++V QDYLKVIWT+QEWS KV+TK+LAE++GVS STASE IRKLA+QGLVDH YG
Sbjct 8 NELTSVTQDYLKVIWTSQEWSDAKVTTKLLAEKLGVSPSTASEGIRKLADQGLVDHAPYG 67
Query 68 AVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKL 127
AVTLTD+GR AA+ MVRRHRLLETFLV ELGYRWDEVH EAE+LEHAVS++L+ IDAKL
Sbjct 68 AVTLTDTGRVAAVGMVRRHRLLETFLVRELGYRWDEVHAEAEILEHAVSEQLLTHIDAKL 127
Query 128 GFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLD 187
G P+RDPHGDPIP ADG VP ++QL ++G + RISDADP+MLRYF IG++LD
Sbjct 128 GHPKRDPHGDPIPAADGTVPEAGSQQLADLDVDESGVITRISDADPEMLRYFEEIGVNLD 187
Query 188 SRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
R++V +R FAG I+V ID +D + LG AA+AI++
Sbjct 188 CRVQVTEKRPFAGTITVCIDGSD--PIHLGDIAARAIFL 224
>gi|269794641|ref|YP_003314096.1| Mn-dependent transcriptional regulator [Sanguibacter keddieii
DSM 10542]
gi|269096826|gb|ACZ21262.1| Mn-dependent transcriptional regulator [Sanguibacter keddieii
DSM 10542]
Length=230
Score = 291 bits (744), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/224 (65%), Positives = 179/224 (80%), Gaps = 4/224 (1%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
+L++VAQDYLKV+W+AQEWS + V+TK+LAERIGV AST SE++R+L+ QGL++H +YG+
Sbjct 6 ELTSVAQDYLKVVWSAQEWSDEPVTTKLLAERIGVGASTVSETVRRLSAQGLLEHPRYGS 65
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
V LTD GR AL +VRRHRL+ETFLV+ELGY WDEVHDEAEVLEHAVSD ++ RIDA+LG
Sbjct 66 VELTDLGRAHALQIVRRHRLIETFLVSELGYTWDEVHDEAEVLEHAVSDLMVDRIDARLG 125
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
P RDPHGDPIP DG VPTPPA L G TG+VARISDAD ++LRYFA +G LD+
Sbjct 126 HPVRDPHGDPIPAPDGSVPTPPAVTLAVLDAGTTGSVARISDADGEVLRYFADLGFGLDA 185
Query 189 RLRVLARREFAGMISVAIDSADG----ATVDLGSPAAQAIWVVS 228
RLRV+ RR+FAG++ + AD +TVDLG AA A+WVV+
Sbjct 186 RLRVVERRDFAGVLCIEWAPADAPGSTSTVDLGLRAADAVWVVT 229
>gi|296393959|ref|YP_003658843.1| DtxR family iron (metal) dependent repressor [Segniliparus rotundus
DSM 44985]
gi|296181106|gb|ADG98012.1| iron (metal) dependent repressor, DtxR family [Segniliparus rotundus
DSM 44985]
Length=233
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/220 (61%), Positives = 172/220 (79%), Gaps = 0/220 (0%)
Query 8 GDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYG 67
G LS V QDYLKV+W EWS+ V+TK+LAE++GVSASTASE +RKL +QGLV+HE+YG
Sbjct 11 GQLSPVTQDYLKVLWNLGEWSEAPVTTKLLAEKLGVSASTASEGVRKLVDQGLVEHERYG 70
Query 68 AVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKL 127
+V+LT GR AA+++VRRHRL+ETFLV EL Y WDEVHDEAE+LEHA+SDR + R+DAKL
Sbjct 71 SVSLTQDGRAAAVSVVRRHRLIETFLVEELHYGWDEVHDEAEILEHAISDRFVERLDAKL 130
Query 128 GFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLD 187
G P RDPHGDPIP DG VP A +L +G +ARISD DP+MLRYF S+G++LD
Sbjct 131 GRPARDPHGDPIPRQDGSVPAQDASKLADAPEGTDALIARISDHDPEMLRYFESVGLALD 190
Query 188 SRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
+++ VL RR+FAG I++ +D ++LG PAA+A+W+V
Sbjct 191 AQVSVLRRRDFAGTITIRLDDQGSNAIELGKPAAEAVWIV 230
>gi|332670882|ref|YP_004453890.1| DtxR family iron (metal) dependent repressor [Cellulomonas fimi
ATCC 484]
gi|332339920|gb|AEE46503.1| iron (metal) dependent repressor, DtxR family [Cellulomonas fimi
ATCC 484]
Length=229
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/219 (64%), Positives = 169/219 (78%), Gaps = 2/219 (0%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
L+AV QDYLKV+W+AQEWS V+TK+LA R+GV AST SE++R+LA+ GLV H+ YGAV
Sbjct 9 LTAVTQDYLKVVWSAQEWSTQPVTTKLLAARLGVGASTVSETVRRLADAGLVTHQPYGAV 68
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LT GRR ALAMVRRHRL+ETFLV LGY WDEVHDEAEVLEHAVSD + RIDA+LG
Sbjct 69 ELTAEGRRHALAMVRRHRLVETFLVEVLGYGWDEVHDEAEVLEHAVSDLFVERIDAQLGR 128
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P+RDPHGDPIPG DG PPA +LW G +VARISDADP++LRY S+G+ LD+
Sbjct 129 PRRDPHGDPIPGPDGSFDPPPAHELWEAATG-PWSVARISDADPELLRYVESVGLVLDAH 187
Query 190 LRVLARREFAGMISVAIDSADG-ATVDLGSPAAQAIWVV 227
+ V+ RR AG++SV + G ATVDLG AA+AIW+V
Sbjct 188 VDVVERRAVAGVVSVRVGEGPGAATVDLGEVAARAIWLV 226
>gi|334337483|ref|YP_004542635.1| iron (metal) dependent repressor, DtxR family [Isoptericola variabilis
225]
gi|334107851|gb|AEG44741.1| iron (metal) dependent repressor, DtxR family [Isoptericola variabilis
225]
Length=249
Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/224 (63%), Positives = 170/224 (76%), Gaps = 1/224 (0%)
Query 6 EPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEK 65
+P +L+ VAQDYLK +W+AQEWS ++V+T +LA+R+GV ST SE++R+L QGL+ HE
Sbjct 25 DPAELTPVAQDYLKAVWSAQEWSSERVTTGLLADRLGVGPSTVSETVRRLTTQGLLGHEP 84
Query 66 YGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDA 125
YG V LTD GRR ALAMVRRHRLLET+LV+ELGY WDEVHDEAEVLEHAVSD L+ R+DA
Sbjct 85 YGGVWLTDLGRRYALAMVRRHRLLETYLVSELGYGWDEVHDEAEVLEHAVSDLLVERLDA 144
Query 126 KLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGIS 185
+LG P RDPHGDPIP ADG+V P A L DG +G VARISDADP+ LRY A +G+
Sbjct 145 RLGRPLRDPHGDPIPTADGRVVRPEAVPLVDLADGTSGVVARISDADPEALRYLADLGLD 204
Query 186 LDSRLRVLARREFAGMISVA-IDSADGATVDLGSPAAQAIWVVS 228
LD +RV RRE+AG + VA + + VDLG AA IWVV+
Sbjct 205 LDVEVRVTQRREYAGTLGVAFVRDGEQVAVDLGMLAASRIWVVT 248
>gi|41408993|ref|NP_961829.1| hypothetical protein MAP2895 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397352|gb|AAS05212.1| hypothetical protein MAP_2895 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=149
Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/149 (88%), Positives = 137/149 (92%), Gaps = 2/149 (1%)
Query 82 MVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFPQRDPHGDPIPG 141
MVRRHRLLETFLVNELGY WDEVHDEAEVLEHAVSDRL+ARIDAKLGFPQRDPHGDPIP
Sbjct 1 MVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVSDRLVARIDAKLGFPQRDPHGDPIPA 60
Query 142 ADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRLRVLARREFAGM 201
DGQVPTPPARQLWAC DGDTGTVARISDAD +MLRYF +GI+LDSRLRVL RREFAGM
Sbjct 61 TDGQVPTPPARQLWACGDGDTGTVARISDADSEMLRYFTDVGINLDSRLRVLTRREFAGM 120
Query 202 ISVAIDSADGA--TVDLGSPAAQAIWVVS 228
ISVAI+S DGA TVDLGSPAA+AIWV +
Sbjct 121 ISVAIESGDGAETTVDLGSPAARAIWVTA 149
>gi|289444336|ref|ZP_06434080.1| transcriptional repressor sirR [Mycobacterium tuberculosis T46]
gi|289570967|ref|ZP_06451194.1| transcriptional repressor sirR [Mycobacterium tuberculosis T17]
gi|289751445|ref|ZP_06510823.1| transcriptional repressor sirR [Mycobacterium tuberculosis T92]
gi|289754894|ref|ZP_06514272.1| transcriptional repressor sirR [Mycobacterium tuberculosis EAS054]
gi|289417255|gb|EFD14495.1| transcriptional repressor sirR [Mycobacterium tuberculosis T46]
gi|289544721|gb|EFD48369.1| transcriptional repressor sirR [Mycobacterium tuberculosis T17]
gi|289692032|gb|EFD59461.1| transcriptional repressor sirR [Mycobacterium tuberculosis T92]
gi|289695481|gb|EFD62910.1| transcriptional repressor sirR [Mycobacterium tuberculosis EAS054]
Length=130
Score = 260 bits (665), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%)
Query 1 VRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
+RADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL
Sbjct 1 MRADEEPGDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGL 60
Query 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM
Sbjct 61 VDHEKYGAVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLM 120
Query 121 ARIDAKLGFP 130
ARIDAKLGFP
Sbjct 121 ARIDAKLGFP 130
>gi|152964950|ref|YP_001360734.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
gi|151359467|gb|ABS02470.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
Length=251
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/213 (62%), Positives = 158/213 (75%), Gaps = 2/213 (0%)
Query 15 QDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVTLTDS 74
+D LK ++ A EWS K++ MLA+ +GVSASTASE++RKL + GL+ HE+YG V LT+
Sbjct 38 EDCLKTVYAAGEWSDAKITLSMLAQTMGVSASTASEAVRKLTDAGLLRHERYGGVELTEE 97
Query 75 GRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFPQRDP 134
GR ALA+VRRHRLLETFLV +LGY WDEVH+EAEVLEH VSDR++ R+DA+LG P+RDP
Sbjct 98 GRTRALAVVRRHRLLETFLVADLGYSWDEVHEEAEVLEHVVSDRMLDRLDARLGHPERDP 157
Query 135 HGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRLRVLA 194
HGDPIP DG VP P A L +G TG VARISDADP +LRYFA +GI LD + VL
Sbjct 158 HGDPIPRPDGTVPRPGAHNLSDVPEGGTGVVARISDADPDVLRYFAELGIGLDLTVEVLQ 217
Query 195 RREFAGMISVAIDSADGATVDLGSPAAQAIWVV 227
RR FAG V + + G VDLG PA AIWV+
Sbjct 218 RRGFAGTTVVRLGT--GREVDLGDPAVAAIWVL 248
>gi|256832794|ref|YP_003161521.1| iron (metal) dependent repressor, DtxR family [Jonesia denitrificans
DSM 20603]
gi|256686325|gb|ACV09218.1| iron (metal) dependent repressor, DtxR family [Jonesia denitrificans
DSM 20603]
Length=229
Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 130/223 (59%), Positives = 159/223 (72%), Gaps = 4/223 (1%)
Query 8 GDLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYG 67
G L++VAQDY+KV+W QEWS V+TK LAER+GV ST SE++R+L QGL+DHE+YG
Sbjct 4 GTLTSVAQDYIKVVWGLQEWSDAPVTTKDLAERLGVGPSTVSETVRRLVSQGLLDHERYG 63
Query 68 AVTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKL 127
A+ LT+ GRR AL MVRRHRL+ETFLV LGY WDEVHDEAEVLEHAVSD ++ RID L
Sbjct 64 AIHLTEQGRRHALDMVRRHRLIETFLVQHLGYTWDEVHDEAEVLEHAVSDLMVHRIDEAL 123
Query 128 GFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLD 187
G P RDPHGDPIP A+ + P A L +G TGTVARISD DP +LRYFA +G LD
Sbjct 124 GHPTRDPHGDPIPSANLALTQPAALTLTVLPEGATGTVARISDDDPDVLRYFADLGFGLD 183
Query 188 SRLRVLARREFAGMISVAIDSADGAT----VDLGSPAAQAIWV 226
+ +RV ARR+ G+I V + + LG AA A+W+
Sbjct 184 AHVRVHARRDAIGVIDVLWAPTNNPNHLTELTLGLRAADAVWI 226
>gi|116662114|ref|YP_829169.1| DtxR family iron dependent repressor [Arthrobacter sp. FB24]
gi|116612866|gb|ABK05588.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
Length=224
Score = 254 bits (650), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/220 (57%), Positives = 160/220 (73%), Gaps = 1/220 (0%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
DLS+ AQDYLK+IW+A EWS ++ +AER+GV STAS+ I+KL +QGLV H YG+
Sbjct 5 DLSSTAQDYLKLIWSATEWSATPMTVSSIAERLGVRPSTASDGIKKLVKQGLVTHAPYGS 64
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
+ LTD+GR A+AMVRRHRLLETFLV LGY WDEVHDEAE+LEHAVS++L+ RID KLG
Sbjct 65 IELTDAGREHAVAMVRRHRLLETFLVQMLGYGWDEVHDEAEILEHAVSEKLIERIDQKLG 124
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
P RDPHGDPIP +G P A QL A G + RISDADPQMLRYF +G++ D+
Sbjct 125 HPTRDPHGDPIPTPEGHPHLPAATQLSAADTGRAVEITRISDADPQMLRYFTELGLAPDT 184
Query 189 RLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
RL V R +A + ++ + D +DLG+ A++AIWV++
Sbjct 185 RLFVREHRPYADVTTIRLQGRD-RDIDLGASASEAIWVIA 223
>gi|50954157|ref|YP_061445.1| DtxR family iron dependent repressor [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50950639|gb|AAT88340.1| iron-dependant repressor, DtxR metalloregulatory family [Leifsonia
xyli subsp. xyli str. CTCB07]
Length=222
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/219 (60%), Positives = 157/219 (72%), Gaps = 3/219 (1%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
LS+VAQDYLKVIW A EW D ++ K LAER+GV A+T S+ IR+LA+QGL+ HE YG +
Sbjct 6 LSSVAQDYLKVIWCATEWEGDPITVKQLAERMGVRAATVSDGIRRLADQGLLAHEPYGGI 65
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LTD+GR A+AMVRRHRL+ETFLV ELGY WDEVHDEAEVLEHAVSD L+ RID +LG+
Sbjct 66 ELTDAGRHGAVAMVRRHRLIETFLVEELGYGWDEVHDEAEVLEHAVSDELIDRIDRRLGY 125
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P RDPHGDPIP ADG A L + G TV RISDADP +LRY GI LD+
Sbjct 126 PARDPHGDPIPTADGTPRRADAAPLLTAQTGVALTVVRISDADPAILRYLGERGIGLDAE 185
Query 190 LRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
+ V REFAG ++V + G + LGS AA A+WV +
Sbjct 186 VTVDEHREFAGDVTVRL---HGEPMVLGSTAAGAVWVAT 221
>gi|296130076|ref|YP_003637326.1| iron (metal) dependent repressor, DtxR family [Cellulomonas flavigena
DSM 20109]
gi|296021891|gb|ADG75127.1| iron (metal) dependent repressor, DtxR family [Cellulomonas flavigena
DSM 20109]
Length=226
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/217 (59%), Positives = 159/217 (74%), Gaps = 2/217 (0%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
LSAV+QDYLKVIW AQEWS V+TK+LA R+GV ST SE++++LA+ GLV H YGAV
Sbjct 8 LSAVSQDYLKVIWGAQEWSDVPVTTKLLASRLGVGPSTVSETVKRLADAGLVSHRPYGAV 67
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LT SGR A+AMVRRHRLLET+LV +LGY WDEVHDEAEVLEHAVSDR + R+ LG
Sbjct 68 ELTASGRAHAVAMVRRHRLLETYLVEKLGYGWDEVHDEAEVLEHAVSDRFVERVADLLGH 127
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P RDPHGDPIP ADG V P A +W G+ VARISDADP++LRY +G+ LD+
Sbjct 128 PDRDPHGDPIPAADGTVHLPDAHVMWRVATGEY-RVARISDADPELLRYLEGVGLVLDAH 186
Query 190 LRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
+ ++ RR G++SV + + +V+LG AA AIW+
Sbjct 187 VTLVERRAVTGVVSVQV-AGRADSVELGEVAASAIWL 222
>gi|336320327|ref|YP_004600295.1| DtxR family iron (metal) dependent repressor [Cellvibrio gilvus
ATCC 13127]
gi|336103908|gb|AEI11727.1| iron (metal) dependent repressor, DtxR family [Cellvibrio gilvus
ATCC 13127]
Length=233
Score = 251 bits (640), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/219 (59%), Positives = 158/219 (73%), Gaps = 4/219 (1%)
Query 10 LSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAV 69
L+AVAQDYLKV+W+A EW+ V+TKMLA R+GV AST SE +R+LA+ GL+ HE YGAV
Sbjct 17 LTAVAQDYLKVVWSATEWADVPVTTKMLAARLGVGASTVSEQVRRLADAGLLTHEPYGAV 76
Query 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGF 129
LTD GR ALAMVRRHRL+ETFLV LGY WDEVHDEAEVLEHAVSD + R+ LG
Sbjct 77 GLTDEGRTHALAMVRRHRLVETFLVEVLGYGWDEVHDEAEVLEHAVSDVFVERVAGLLGH 136
Query 130 PQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSR 189
P RDPHGDPIPG DG + P A ++WA G +ARISDADP +LR+ +G+ LD+
Sbjct 137 PVRDPHGDPIPGPDGSLQVPDATEMWAVAPG-AWRIARISDADPDLLRWLEEVGLVLDAE 195
Query 190 LRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWVVS 228
+ V+ RRE G ++V + VDLG AA+AIW+ S
Sbjct 196 VTVVERREAVGTVAVRLGD---RPVDLGEVAARAIWLTS 231
>gi|229819886|ref|YP_002881412.1| iron (metal) dependent repressor, DtxR family [Beutenbergia cavernae
DSM 12333]
gi|229565799|gb|ACQ79650.1| iron (metal) dependent repressor, DtxR family [Beutenbergia cavernae
DSM 12333]
Length=238
Score = 248 bits (632), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/228 (55%), Positives = 160/228 (71%), Gaps = 9/228 (3%)
Query 9 DLSAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGA 68
D+SAVAQDYLK++W AQEWS ++TK LAER+GV+A T SE +RKL+E GL+DH +YG
Sbjct 9 DVSAVAQDYLKLVWNAQEWSDAPLTTKRLAERLGVTAGTVSEGVRKLSEAGLIDHPRYGQ 68
Query 69 VTLTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLG 128
+ LTD+GR ALA+VRRHRL+ET LV GY WDEVHDEAEVLEHAVSD + RI A LG
Sbjct 69 IALTDAGREVALAVVRRHRLIETLLVETFGYSWDEVHDEAEVLEHAVSDAFVERIAAHLG 128
Query 129 FPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDS 188
P+RDPHGDPIP ADG++ P AR + G+ G V R+SDA +L+YFA +G+ D+
Sbjct 129 HPERDPHGDPIPTADGEIRIPAARPVSDLAVGEGGVVTRVSDAAGDLLQYFAEVGLVPDA 188
Query 189 RLRVLARREFAGMISVAIDSA-----DGA----TVDLGSPAAQAIWVV 227
+ V+ R + A ++ + + DGA +V L PAA AIWVV
Sbjct 189 HVSVVERNDGAALLGLRVRGGEASGDDGAASETSVPLALPAAHAIWVV 236
>gi|220913136|ref|YP_002488445.1| DtxR family iron (metal) dependent repressor [Arthrobacter chlorophenolicus
A6]
gi|219860014|gb|ACL40356.1| iron (metal) dependent repressor, DtxR family [Arthrobacter chlorophenolicus
A6]
Length=237
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/218 (54%), Positives = 156/218 (72%), Gaps = 3/218 (1%)
Query 11 SAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVT 70
S+ +DY+KV+++ EW +++ LA+R+GV+ S+ SE +RKL +QGLVDH+ Y A+T
Sbjct 7 SSSIEDYVKVVYSFTEWQDKPITSSQLAQRLGVANSSVSEMVRKLKDQGLVDHKPYSAIT 66
Query 71 LTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFP 130
LTD+G R AL+MVRRHRL+ET+LV +LGY WDEVHDEAE+LEHAVSD + R+ A+LG P
Sbjct 67 LTDAGLRLALSMVRRHRLIETYLVQQLGYSWDEVHDEAELLEHAVSDTFIERVSAQLGHP 126
Query 131 QRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRL 190
RDPHGDPIP ADG+V P AR L +G TG + RISD +P++LRY A+ I LDS +
Sbjct 127 DRDPHGDPIPTADGKVHMPVARLLGELDEGHTGRITRISDDNPELLRYLAAEEIDLDSEV 186
Query 191 RVLARREFAGMISVAIDSADGAT--VDLGSPAAQAIWV 226
++L RR F G + V I +A G T DL A+WV
Sbjct 187 QILGRRPFGGALIVRISNA-GRTREFDLADEVTSALWV 223
>gi|119963034|ref|YP_948365.1| Iron dependent repressor [Arthrobacter aurescens TC1]
gi|119949893|gb|ABM08804.1| putative Iron dependent repressor [Arthrobacter aurescens TC1]
Length=237
Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/219 (53%), Positives = 150/219 (69%), Gaps = 1/219 (0%)
Query 11 SAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVT 70
S+ +DY+KVI++ EW +++ LA+R+GV+ S+ SE +RKL +QGLVDH+ Y A+
Sbjct 7 SSSIEDYVKVIYSYTEWQDKPITSSQLAQRLGVANSSVSEMVRKLKDQGLVDHQPYSAIR 66
Query 71 LTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFP 130
LT G R AL+MVRRHRL+ET+LV ELGY WDEVHDEAE+LEHAVSD + R+ AKLG P
Sbjct 67 LTPQGMRLALSMVRRHRLIETYLVEELGYSWDEVHDEAEMLEHAVSDTFIERMSAKLGHP 126
Query 131 QRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRL 190
RDPHGDPIP ADG V P A ++ G +G + RISD +P +LRY AS ISLD+ +
Sbjct 127 VRDPHGDPIPSADGSVELPHAYRMIELDQGHSGRITRISDENPDLLRYLASEEISLDAPV 186
Query 191 RVLARREFAGMISVAIDS-ADGATVDLGSPAAQAIWVVS 228
V+ R+ F G + V I S A G DL A+WV S
Sbjct 187 EVVGRKPFGGALVVRIGSGAKGREFDLADEVTSALWVQS 225
>gi|325963878|ref|YP_004241784.1| Mn-dependent transcriptional regulator [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469965|gb|ADX73650.1| Mn-dependent transcriptional regulator [Arthrobacter phenanthrenivorans
Sphe3]
Length=242
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/219 (53%), Positives = 152/219 (70%), Gaps = 1/219 (0%)
Query 11 SAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVT 70
S+ +DY+KVI++ EW +++ LA+R+GV+ S+ SE +RKL +QGLVDH+ Y A+
Sbjct 7 SSSIEDYVKVIYSFTEWQDKPITSSQLAQRLGVANSSVSEMVRKLKDQGLVDHKPYSAIR 66
Query 71 LTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFP 130
LTD+G R AL+MVRRHRL+ET+LV +LGY WDEVHDEAE+LEHAVSD + R+ AKLG P
Sbjct 67 LTDTGLRLALSMVRRHRLIETYLVQQLGYSWDEVHDEAELLEHAVSDTFVERVAAKLGNP 126
Query 131 QRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRL 190
QRDPHGDPIP ADGQV P A + +G TG + RISD +P +LRY A+ I LD+ +
Sbjct 127 QRDPHGDPIPTADGQVLMPRAHLMGELDEGHTGRITRISDDNPDLLRYLAAEEIDLDAEV 186
Query 191 RVLARREFAGMISVAI-DSADGATVDLGSPAAQAIWVVS 228
V+ RR F G + V I +S DL A+WV S
Sbjct 187 EVVGRRPFGGALVVRIRNSGRTRDYDLADEVTSALWVHS 225
>gi|163840121|ref|YP_001624526.1| iron dependent repressor [Renibacterium salmoninarum ATCC 33209]
gi|162953597|gb|ABY23112.1| iron dependent repressor [Renibacterium salmoninarum ATCC 33209]
Length=235
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/218 (51%), Positives = 145/218 (67%), Gaps = 1/218 (0%)
Query 11 SAVAQDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVT 70
S+ +DY+K I+ EW +++ LA R+GV+ S+ SE +RKL + GLVDH+ YG+VT
Sbjct 7 SSSVEDYVKTIYAYTEWQDKPINSSQLATRLGVANSSVSEMVRKLKDAGLVDHQPYGSVT 66
Query 71 LTDSGRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFP 130
LT +G + AL+MVRRHRLLET+L ELGYRWD+VHDEAE LEHAVSD + R+ KLG P
Sbjct 67 LTSNGLKLALSMVRRHRLLETYLAQELGYRWDQVHDEAETLEHAVSDTFIERLSEKLGHP 126
Query 131 QRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRL 190
RDPHGDPIPG DG + PPA QL G G + RISD +P++LRY I LD+ +
Sbjct 127 ARDPHGDPIPGPDGTIELPPAHQLAVLDSGHRGQIIRISDENPKLLRYLDDENIQLDAAV 186
Query 191 RVLARREFAGMISVAI-DSADGATVDLGSPAAQAIWVV 227
V+ R+ F G + V + D + +DL A+WVV
Sbjct 187 EVIDRKPFGGALVVRLGDGSQSREIDLSEEVGSALWVV 224
Lambda K H
0.318 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 294240045594
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40