BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2792c

Length=193
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609929|ref|NP_217308.1|  resolvase [Mycobacterium tuberculos...   384    3e-105
gi|326904407|gb|EGE51340.1|  resolvase [Mycobacterium tuberculosi...   384    5e-105
gi|289575490|ref|ZP_06455717.1|  resolvase [Mycobacterium tubercu...   384    5e-105
gi|31793968|ref|NP_856461.1|  resolvase [Mycobacterium bovis AF21...   380    5e-104
gi|289444543|ref|ZP_06434287.1|  resolvase [Mycobacterium tubercu...   311    4e-83 
gi|15610116|ref|NP_217495.1|  resolvase [Mycobacterium tuberculos...   308    3e-82 
gi|167969029|ref|ZP_02551306.1|  hypothetical resolvase [Mycobact...   307    6e-82 
gi|15607745|ref|NP_215119.1|  resolvase [Mycobacterium tuberculos...   306    7e-82 
gi|31794155|ref|NP_856648.1|  resolvase [Mycobacterium bovis AF21...   306    1e-81 
gi|306774711|ref|ZP_07413048.1|  resolvase [Mycobacterium tubercu...   304    4e-81 
gi|289446158|ref|ZP_06435902.1|  resolvase [Mycobacterium tubercu...   304    4e-81 
gi|167969943|ref|ZP_02552220.1|  hypothetical resolvase [Mycobact...   292    2e-77 
gi|333921804|ref|YP_004495385.1|  putative resolvase [Amycolicico...   292    2e-77 
gi|15610964|ref|NP_218345.1|  resolvase [Mycobacterium tuberculos...   292    2e-77 
gi|298527303|ref|ZP_07014712.1|  conserved hypothetical protein [...   291    3e-77 
gi|289747670|ref|ZP_06507048.1|  resolvase [Mycobacterium tubercu...   290    1e-76 
gi|340628797|ref|YP_004747249.1|  putative resolvase [Mycobacteri...   288    2e-76 
gi|333920658|ref|YP_004494239.1|  putative resolvase [Amycolicico...   286    8e-76 
gi|294993043|ref|ZP_06798734.1|  resolvase [Mycobacterium tubercu...   283    1e-74 
gi|333921217|ref|YP_004494798.1|  putative resolvase [Amycolicico...   282    1e-74 
gi|86741374|ref|YP_481774.1|  resolvase-like protein [Frankia sp....   258    4e-67 
gi|289749103|ref|ZP_06508481.1|  resolvase [Mycobacterium tubercu...   254    4e-66 
gi|158312541|ref|YP_001505049.1|  resolvase domain-containing pro...   252    2e-65 
gi|314929732|gb|EFS93563.1|  resolvase protein [Propionibacterium...   244    4e-63 
gi|327446282|gb|EGE92936.1|  resolvase protein [Propionibacterium...   244    6e-63 
gi|328905690|gb|EGG25468.1|  resolvase [Propionibacterium humerus...   244    6e-63 
gi|315081078|gb|EFT53054.1|  resolvase protein [Propionibacterium...   243    7e-63 
gi|314973967|gb|EFT18063.1|  resolvase protein [Propionibacterium...   243    8e-63 
gi|86742114|ref|YP_482514.1|  resolvase-like protein [Frankia sp....   241    4e-62 
gi|315092548|gb|EFT64524.1|  resolvase protein [Propionibacterium...   241    4e-62 
gi|288921956|ref|ZP_06416167.1|  Resolvase domain protein [Franki...   233    1e-59 
gi|240171118|ref|ZP_04749777.1|  putative resolvase [Mycobacteriu...   228    5e-58 
gi|340627876|ref|YP_004746328.1|  putative resolvase [Mycobacteri...   225    3e-57 
gi|158313451|ref|YP_001505959.1|  resolvase domain-containing pro...   219    1e-55 
gi|15608061|ref|NP_215436.1|  resolvase [Mycobacterium tuberculos...   218    4e-55 
gi|340625932|ref|YP_004744384.1|  putative resolvase [Mycobacteri...   217    6e-55 
gi|295696699|ref|YP_003589937.1|  Resolvase domain-containing pro...   217    6e-55 
gi|289752977|ref|ZP_06512355.1|  resolvase [Mycobacterium tubercu...   216    1e-54 
gi|15610023|ref|NP_217402.1|  resolvase [Mycobacterium tuberculos...   211    4e-53 
gi|326904500|gb|EGE51433.1|  resolvase [Mycobacterium tuberculosi...   211    4e-53 
gi|167969514|ref|ZP_02551791.1|  IS1539 resolvase [Mycobacterium ...   211    6e-53 
gi|339287910|gb|AEJ42020.1|  Resolvase domain protein [Alicycloba...   210    9e-53 
gi|148824076|ref|YP_001288829.1|  resolvase [Mycobacterium tuberc...   209    1e-52 
gi|258512473|ref|YP_003185907.1|  Resolvase domain-containing pro...   209    2e-52 
gi|339290995|gb|AEJ45105.1|  Resolvase domain protein [Alicycloba...   209    2e-52 
gi|254552945|ref|ZP_05143392.1|  resolvase [Mycobacterium tubercu...   208    3e-52 
gi|339290736|gb|AEJ44846.1|  Resolvase domain protein [Alicycloba...   208    3e-52 
gi|294994020|ref|ZP_06799711.1|  resolvase [Mycobacterium tubercu...   207    4e-52 
gi|218668090|ref|YP_002425577.1|  transposon, resolvase [Acidithi...   207    7e-52 
gi|167629538|ref|YP_001680037.1|  resolvase, n terminal domain [H...   207    9e-52 


>gi|15609929|ref|NP_217308.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842330|ref|NP_337367.1| IS1602 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|121638672|ref|YP_978896.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 74 more sequence titles
 Length=193

 Score =  384 bits (986),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS
Sbjct  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180

Query  181  RALAAAAEESEAA  193
            RALAAAAEESEAA
Sbjct  181  RALAAAAEESEAA  193


>gi|326904407|gb|EGE51340.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457897|gb|AEB03320.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  384 bits (985),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 193/193 (100%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS
Sbjct  9    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  68

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR
Sbjct  69   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  128

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK
Sbjct  129  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  188

Query  181  RALAAAAEESEAA  193
            RALAAAAEESEAA
Sbjct  189  RALAAAAEESEAA  201


>gi|289575490|ref|ZP_06455717.1| resolvase [Mycobacterium tuberculosis K85]
 gi|289539921|gb|EFD44499.1| resolvase [Mycobacterium tuberculosis K85]
Length=193

 Score =  384 bits (985),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 192/193 (99%), Positives = 193/193 (100%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNG+ARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS
Sbjct  1    MNLAVWAERNGIARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180

Query  181  RALAAAAEESEAA  193
            RALAAAAEESEAA
Sbjct  181  RALAAAAEESEAA  193


>gi|31793968|ref|NP_856461.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|31619562|emb|CAD95000.1| POSSIBLE RESOLVASE [Mycobacterium bovis AF2122/97]
Length=193

 Score =  380 bits (976),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 191/193 (99%), Positives = 191/193 (99%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVARVT YRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS
Sbjct  1    MNLAVWAERNGVARVTVYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQKPDLDRQVARVTAWAT EQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR
Sbjct  61   ADQKPDLDRQVARVTAWATAEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK
Sbjct  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180

Query  181  RALAAAAEESEAA  193
            RALAAAAEESEAA
Sbjct  181  RALAAAAEESEAA  193


>gi|289444543|ref|ZP_06434287.1| resolvase [Mycobacterium tuberculosis T46]
 gi|289448651|ref|ZP_06438395.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289575686|ref|ZP_06455913.1| resolvase [Mycobacterium tuberculosis K85]
 23 more sequence titles
 Length=194

 Score =  311 bits (796),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 160/194 (83%), Positives = 170/194 (88%), Gaps = 1/194 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVAR TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVTAWAT +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAA-EESEAA  193
            RALAAAA E+ EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|15610116|ref|NP_217495.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842533|ref|NP_337570.1| IS1538 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|148662829|ref|YP_001284352.1| IS1538 resolvase [Mycobacterium tuberculosis H37Ra]
 47 more sequence titles
 Length=194

 Score =  308 bits (789),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 159/194 (82%), Positives = 169/194 (88%), Gaps = 1/194 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVA  TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLATWAERNGVAPGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVTAWAT +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWATAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCR GS+YV+AA AAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAA+NR K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAA-EESEAA  193
            RALAAAA E+ EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|167969029|ref|ZP_02551306.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254230942|ref|ZP_04924269.1| hypothetical protein TBCG_00600 [Mycobacterium tuberculosis C]
 gi|254549562|ref|ZP_05140009.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 26 more sequence titles
 Length=194

 Score =  307 bits (786),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 153/177 (87%), Positives = 160/177 (91%), Gaps = 0/177 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVARVTAYRWFHAGLLPVPARK GRLILVD+  ++   + +TAVYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVT+WAT EQI VDKVVTEVGS LNGHRRKF A+LRD SV RIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            DRFCRFGSEYV AALAAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAAQN
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  177


>gi|15607745|ref|NP_215119.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840006|ref|NP_335043.1| IS1536 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31791787|ref|NP_854280.1| resolvase [Mycobacterium bovis AF2122/97]
 39 more sequence titles
 Length=202

 Score =  306 bits (785),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 153/177 (87%), Positives = 160/177 (91%), Gaps = 0/177 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVARVTAYRWFHAGLLPVPARK GRLILVD+  ++   + +TAVYARVSS
Sbjct  9    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  68

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVT+WAT EQI VDKVVTEVGS LNGHRRKF A+LRD SV RIVVEHR
Sbjct  69   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  128

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            DRFCRFGSEYV AALAAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAAQN
Sbjct  129  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  185


>gi|31794155|ref|NP_856648.1| resolvase [Mycobacterium bovis AF2122/97]
 gi|121638860|ref|YP_979084.1| putative resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991352|ref|YP_002646041.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619750|emb|CAD96690.1| PROBABLE RESOLVASE [Mycobacterium bovis AF2122/97]
 gi|121494508|emb|CAL72989.1| Probable resolvase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774467|dbj|BAH27273.1| putative resolvase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602899|emb|CCC65577.1| probable resolvase [Mycobacterium bovis BCG str. Moreau RDJ]
Length=194

 Score =  306 bits (783),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 158/194 (82%), Positives = 168/194 (87%), Gaps = 1/194 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVAR TAYRWF AGLL V AR+ GRLILVD+   D   R+ TAVYARVSS
Sbjct  1    MNLATWAERNGVARGTAYRWFRAGLLSVMARRVGRLILVDEPAGDAGMRSPTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVTAWA  +Q+ VDKVVTEVGSA N HRRKFL+LLRDPSV RIVVEHR
Sbjct  61   ADQKADLDRQVARVTAWAAAQQMPVDKVVTEVGSAFNEHRRKFLSLLRDPSVHRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCR GS+YV+AA AAQGRELVVVDSAEV DDLVRDMTEILTSMCARLYGKRAA+NR K
Sbjct  121  DRFCRLGSKYVQAAFAAQGRELVVVDSAEVGDDLVRDMTEILTSMCARLYGKRAAENRTK  180

Query  181  RALAAAA-EESEAA  193
            RALAAAA E+ EAA
Sbjct  181  RALAAAAGEDHEAA  194


>gi|306774711|ref|ZP_07413048.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|306970815|ref|ZP_07483476.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|307078538|ref|ZP_07487708.1| resolvase [Mycobacterium tuberculosis SUMu011]
 gi|308216606|gb|EFO76005.1| resolvase [Mycobacterium tuberculosis SUMu001]
 gi|308359602|gb|EFP48453.1| resolvase [Mycobacterium tuberculosis SUMu010]
 gi|308363530|gb|EFP52381.1| resolvase [Mycobacterium tuberculosis SUMu011]
Length=194

 Score =  304 bits (779),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 152/177 (86%), Positives = 159/177 (90%), Gaps = 0/177 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVARVTAYRWFHAGLLPVPARK GRLILVD+  ++   + +TAVYARVSS
Sbjct  1    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVT+WAT E I VDKVVTEVGS LNGHRRKF A+LRD SV RIVVEHR
Sbjct  61   ADQKSDLDRQVARVTSWATAEPIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            DRFCRFGSEYV AALAAQGRELVVVDSAEVDDDLV DMTEILTSMCARLYGKRAAQN
Sbjct  121  DRFCRFGSEYVHAALAAQGRELVVVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  177


>gi|289446158|ref|ZP_06435902.1| resolvase [Mycobacterium tuberculosis CPHL_A]
 gi|289419116|gb|EFD16317.1| resolvase [Mycobacterium tuberculosis CPHL_A]
Length=202

 Score =  304 bits (778),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 152/177 (86%), Positives = 159/177 (90%), Gaps = 0/177 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAERNGVARVTAYRWFHAGLLPVPARK GRLILVD+  ++   + +TAVYARVSS
Sbjct  9    MNLAAWAERNGVARVTAYRWFHAGLLPVPARKVGRLILVDELASEAGAQPKTAVYARVSS  68

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVARVT+WAT EQI VDKVVTEVGS LNGHRRKF A+LRD SV RIVVEHR
Sbjct  69   ADQKSDLDRQVARVTSWATAEQIPVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHR  128

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            DRFCRFGSEYV AALAAQGRELVVVDSAE DDDLV DMTEILTSMCARLYGKRAAQN
Sbjct  129  DRFCRFGSEYVHAALAAQGRELVVVDSAEGDDDLVWDMTEILTSMCARLYGKRAAQN  185


>gi|167969943|ref|ZP_02552220.1| hypothetical resolvase [Mycobacterium tuberculosis H37Ra]
 gi|297636511|ref|ZP_06954291.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|297733506|ref|ZP_06962624.1| resolvase [Mycobacterium tuberculosis KZN R506]
 26 more sequence titles
 Length=193

 Score =  292 bits (747),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 147/183 (81%), Positives = 158/183 (87%), Gaps = 0/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  1    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  61   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN AK
Sbjct  121  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  180

Query  181  RAL  183
            RAL
Sbjct  181  RAL  183


>gi|333921804|ref|YP_004495385.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333484025|gb|AEF42585.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=195

 Score =  292 bits (747),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 144/170 (85%), Positives = 152/170 (90%), Gaps = 0/170 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WA+RNGVARVTAYRWF +GLLPVPARK GRLILVDD  A+      TAVYARVSS
Sbjct  1    MNLATWAQRNGVARVTAYRWFRSGLLPVPARKVGRLILVDDPAAEMQSSGCTAVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DL RQVARVTAWAT  +I VDKVVTEVGSALNGHRRKFLALLRDPS+ RIVVEHR
Sbjct  61   ADQKADLHRQVARVTAWATDRRIPVDKVVTEVGSALNGHRRKFLALLRDPSIARIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLY  170
            DRFCRFGSEYV+AALAA GRELVV+DS+EVDDDLVRDMTEILTSMCARLY
Sbjct  121  DRFCRFGSEYVQAALAAHGRELVVIDSSEVDDDLVRDMTEILTSMCARLY  170


>gi|15610964|ref|NP_218345.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15843452|ref|NP_338489.1| IS1537 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31795002|ref|NP_857495.1| resolvase [Mycobacterium bovis AF2122/97]
 40 more sequence titles
 Length=203

 Score =  292 bits (747),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 147/183 (81%), Positives = 158/183 (87%), Gaps = 0/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN AK
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|298527303|ref|ZP_07014712.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497097|gb|EFI32391.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|328460604|gb|AEB06027.1| resolvase [Mycobacterium tuberculosis KZN 4207]
Length=201

 Score =  291 bits (746),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 147/183 (81%), Positives = 158/183 (87%), Gaps = 0/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  9    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  68

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  69   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  128

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN AK
Sbjct  129  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  188

Query  181  RAL  183
            RAL
Sbjct  189  RAL  191


>gi|289747670|ref|ZP_06507048.1| resolvase [Mycobacterium tuberculosis 02_1987]
 gi|289688198|gb|EFD55686.1| resolvase [Mycobacterium tuberculosis 02_1987]
Length=203

 Score =  290 bits (741),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 146/183 (80%), Positives = 157/183 (86%), Gaps = 0/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  70

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  130

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFC FGSEYVEAAL AQGRELVVVD  EVDDDLV DMTEILTSMCARLYG+RAAQN AK
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLPEVDDDLVGDMTEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|340628797|ref|YP_004747249.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006987|emb|CCC46178.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=203

 Score =  288 bits (738),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 145/183 (80%), Positives = 156/183 (86%), Gaps = 0/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  11   MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTVVYARVSS  70

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIV EHR
Sbjct  71   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVAEHR  130

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFC FGSEYVEAAL AQGRELVVVD AEVDDDLV DM EILTSMCARLYG+RAAQN AK
Sbjct  131  DRFCWFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMIEILTSMCARLYGERAAQNGAK  190

Query  181  RAL  183
            RAL
Sbjct  191  RAL  193


>gi|333920658|ref|YP_004494239.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482879|gb|AEF41439.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  286 bits (733),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 151/192 (79%), Positives = 162/192 (85%), Gaps = 0/192 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WA+RNGVARVTAYRWF +G LPVPARKAG LILV D   +     RTAVYA VSS
Sbjct  21   MNLATWAQRNGVARVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHGRTAVYAGVSS  80

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK  LDRQVARVTAWA +E+I V KVVTEVGSALNGHR KFLALLRDP V RIVVEHR
Sbjct  81   ADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDPIVTRIVVEHR  140

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSEYV+AALAA G  LVVVDS EVDDDLVRDMTEILTSMCARLYGKRAA +RAK
Sbjct  141  DRFCRFGSEYVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLYGKRAAVHRAK  200

Query  181  RALAAAAEESEA  192
            RA+AA A+++  
Sbjct  201  RAVAATADDTSG  212


>gi|294993043|ref|ZP_06798734.1| resolvase [Mycobacterium tuberculosis 210]
 gi|339296637|gb|AEJ48748.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339300234|gb|AEJ52344.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=189

 Score =  283 bits (724),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 142/179 (80%), Positives = 154/179 (87%), Gaps = 0/179 (0%)

Query  5    VWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSSADQK  64
            +WAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSSADQ+
Sbjct  1    MWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSSADQR  60

Query  65   PDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHRDRFC  124
             DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHRDRFC
Sbjct  61   SDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHRDRFC  120

Query  125  RFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAKRAL  183
             FGSEYVEAAL AQGRELVVVD AEVDDDLV DMTEILTSMCARLYG+RAAQN AKRAL
Sbjct  121  WFGSEYVEAALVAQGRELVVVDLAEVDDDLVGDMTEILTSMCARLYGERAAQNGAKRAL  179


>gi|333921217|ref|YP_004494798.1| putative resolvase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333483438|gb|AEF41998.1| Possible resolvase [Amycolicicoccus subflavus DQS3-9A1]
Length=215

 Score =  282 bits (722),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 149/192 (78%), Positives = 160/192 (84%), Gaps = 0/192 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WA+RNGV RVTAYRWF +G LPVPARKAG LILV D   +     RTAVYA VSS
Sbjct  21   MNLATWAQRNGVGRVTAYRWFRSGSLPVPARKAGGLILVGDPTTNTQSHGRTAVYAGVSS  80

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK  LDRQVARVTAWA +E+I V KVVTEVGSALNGHR KFLALLRDP V RIVVEHR
Sbjct  81   ADQKAGLDRQVARVTAWAASERIGVGKVVTEVGSALNGHRGKFLALLRDPIVTRIVVEHR  140

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DRFCRFGSE V+AALAA G  LVVVDS EVDDDLVRDMTEILTSMCARLYGKRAA +RAK
Sbjct  141  DRFCRFGSECVQAALAANGGALVVVDSCEVDDDLVRDMTEILTSMCARLYGKRAAVHRAK  200

Query  181  RALAAAAEESEA  192
            RA+AA A+++  
Sbjct  201  RAVAATADDTSG  212


>gi|86741374|ref|YP_481774.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568236|gb|ABD12045.1| Resolvase-like [Frankia sp. CcI3]
Length=190

 Score =  258 bits (658),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 132/177 (75%), Positives = 146/177 (83%), Gaps = 1/177 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL  WAE  GVA VTA RW+ AG LPVPAR+ G LILV  +P   +    TAVYARVSS
Sbjct  1    MNLKEWAESQGVAYVTARRWYAAGKLPVPARRVGGLILVG-EPDQPTGDGLTAVYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+PDLDRQVARVTAWAT + + VDKVVTEVGSALNGHRRKFLALLRDP V  IVVE+R
Sbjct  60   ADQRPDLDRQVARVTAWATGQNLPVDKVVTEVGSALNGHRRKFLALLRDPDVATIVVEYR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            DRF RFG+EYVEAAL+AQGR L+VVD  EVDDDLV D+TEILTS+CARLYG+RAA N
Sbjct  120  DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYGRRAAVN  176


>gi|289749103|ref|ZP_06508481.1| resolvase [Mycobacterium tuberculosis T92]
 gi|289689690|gb|EFD57119.1| resolvase [Mycobacterium tuberculosis T92]
Length=172

 Score =  254 bits (649),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 129/154 (84%), Positives = 136/154 (89%), Gaps = 0/154 (0%)

Query  24   GLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSSADQKPDLDRQVARVTAWATTEQI  83
            G  PVPARK GRLILVD+  ++   + +TAVYARVSSADQK DLDRQVARVT+WAT EQI
Sbjct  2    GSCPVPARKVGRLILVDELASEAGAQPKTAVYARVSSADQKSDLDRQVARVTSWATAEQI  61

Query  84   AVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHRDRFCRFGSEYVEAALAAQGRELV  143
             VDKVVTEVGS LNGHRRKF A+LRD SV RIVVEHRDRFCRFGSEYV AALAAQGRELV
Sbjct  62   PVDKVVTEVGSVLNGHRRKFPAVLRDLSVTRIVVEHRDRFCRFGSEYVHAALAAQGRELV  121

Query  144  VVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQN  177
            VVDSAEVDDDLV DMTEILTSMCARLYGKRAAQN
Sbjct  122  VVDSAEVDDDLVWDMTEILTSMCARLYGKRAAQN  155


>gi|158312541|ref|YP_001505049.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158317424|ref|YP_001509932.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158107946|gb|ABW10143.1| Resolvase domain [Frankia sp. EAN1pec]
 gi|158112829|gb|ABW15026.1| Resolvase domain [Frankia sp. EAN1pec]
Length=190

 Score =  252 bits (643),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 129/171 (76%), Positives = 138/171 (81%), Gaps = 1/171 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL  WAE  GVA VTA RWFHAG LPVPARK G LILV  +P   +      VYARVSS
Sbjct  1    MNLKEWAESQGVAYVTAQRWFHAGKLPVPARKVGGLILVG-EPDRPATSGTVVVYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQVA VT WAT + + VD+VVTEVGSALNGHRRKFLALLRDP+   IVVEHR
Sbjct  60   ADQKSDLDRQVACVTGWATGQGLPVDRVVTEVGSALNGHRRKFLALLRDPAATTIVVEHR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            DRF RFG+EYVEAALAA GR L+VVD AEVDDDLVRD+TEILTSMCARLYG
Sbjct  120  DRFARFGAEYVEAALAANGRRLLVVDPAEVDDDLVRDITEILTSMCARLYG  170


>gi|314929732|gb|EFS93563.1| resolvase protein [Propionibacterium acnes HL044PA1]
Length=206

 Score =  244 bits (624),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 117/192 (61%), Positives = 152/192 (80%), Gaps = 6/192 (3%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRS--RRARTAV  54
            MNL  WA   G++  TA RW+H GL+PVP  + GRL+LVD D+   P + S     +T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARV SADQKPDLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LL+D SV+ 
Sbjct  61   YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRALAAA  186
            A++RA++A+  A
Sbjct  181  AKHRARKAMETA  192


>gi|327446282|gb|EGE92936.1| resolvase protein [Propionibacterium acnes HL043PA1]
 gi|327451294|gb|EGE97948.1| resolvase protein [Propionibacterium acnes HL043PA2]
Length=206

 Score =  244 bits (622),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 121/200 (61%), Positives = 155/200 (78%), Gaps = 10/200 (5%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRS--RRARTAV  54
            MNL  WA   G++  TA RW+H GL+PVP R+ GRL+LVD D+   P + S     +T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARVSSADQK DLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LLRD SV+ 
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRA----LAAAAEES  190
            A++RA++A    +    EES
Sbjct  181  AKHRARKAVENVMTTDGEES  200


>gi|328905690|gb|EGG25468.1| resolvase [Propionibacterium humerusii P08]
Length=206

 Score =  244 bits (622),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 117/192 (61%), Positives = 152/192 (80%), Gaps = 6/192 (3%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRS--RRARTAV  54
            MNL  WA   G++  TA RW+H GL+PVP  + GRL+LVD D+   P + S     +T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTPEPTKTII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARV SADQKPDLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LL+D SV+ 
Sbjct  61   YARVCSADQKPDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRALAAA  186
            A++RA++A+  A
Sbjct  181  AKHRARKAVETA  192


>gi|315081078|gb|EFT53054.1| resolvase protein [Propionibacterium acnes HL078PA1]
Length=206

 Score =  243 bits (621),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 123/200 (62%), Positives = 154/200 (77%), Gaps = 10/200 (5%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRSRRARTAV--  54
            MNL  WA   G++  TA RW+H GL+PVP R+ GRL+LVD D+   P + S    T V  
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFGPTKVII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARVSSADQK DLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LLRD SV+ 
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R LVVVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRA----LAAAAEES  190
            A++RA++A    +    EES
Sbjct  181  AKHRARKAVETVMTTDGEES  200


>gi|314973967|gb|EFT18063.1| resolvase protein [Propionibacterium acnes HL053PA1]
Length=206

 Score =  243 bits (621),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 121/200 (61%), Positives = 155/200 (78%), Gaps = 10/200 (5%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRS--RRARTAV  54
            MNL  WA   G++  TA RW+H GL+PVP R+ GRL+LVD D+   P + S     +T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVRRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARVSSADQK DLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LLRD SV+ 
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLRDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R LVVVD  E+++DLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLVVVDDKEIENDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRA----LAAAAEES  190
            A++RA++A    +    EES
Sbjct  181  AKHRARKAVETVMTTDGEES  200


>gi|86742114|ref|YP_482514.1| resolvase-like protein [Frankia sp. CcI3]
 gi|86568976|gb|ABD12785.1| Resolvase-like [Frankia sp. CcI3]
Length=197

 Score =  241 bits (615),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 120/171 (71%), Positives = 135/171 (79%), Gaps = 1/171 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            +NL  WA  NGV   TA RW+  GLLPVPARK G L+LVD+      R     VYARVSS
Sbjct  8    VNLKEWAAANGVGYTTARRWYRDGLLPVPARKVGGLVLVDESTVPAGRPV-AVVYARVSS  66

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQKPDLDRQVAR+  WA ++ +AV +VVTEVGSALNGHRRKFL LLRDP+V  IVVEHR
Sbjct  67   ADQKPDLDRQVARIVTWAASQNLAVGRVVTEVGSALNGHRRKFLGLLRDPAVATIVVEHR  126

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            DRF RFG+EYVEAAL+AQGR L+VVD  EVDDDLV D+TEILTS+CARLYG
Sbjct  127  DRFARFGAEYVEAALSAQGRRLLVVDPGEVDDDLVGDVTEILTSLCARLYG  177


>gi|315092548|gb|EFT64524.1| resolvase protein [Propionibacterium acnes HL110PA4]
Length=206

 Score =  241 bits (615),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 116/189 (62%), Positives = 151/189 (80%), Gaps = 6/189 (3%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVD-DQ---PADRS--RRARTAV  54
            MNL  WA   G++  TA RW+H GL+PVP  + GRL+LVD D+   P + S     +T +
Sbjct  1    MNLKEWAGVRGISYQTALRWYHRGLMPVPVHRVGRLVLVDCDEHGLPFEGSTFEPTKTII  60

Query  55   YARVSSADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKR  114
            YARVSSADQK DLDRQ+ARV  WA+ ++++VD VVTEVGS L+GHR+KF  LL+D SV+ 
Sbjct  61   YARVSSADQKSDLDRQIARVMTWASAKELSVDGVVTEVGSGLDGHRKKFEKLLKDGSVRT  120

Query  115  IVVEHRDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRA  174
            I+VEHRDRFCRFGSEY+EAAL+AQ R L+VVD  E++DDLV+DMT++LTSMCARLYGKR+
Sbjct  121  ILVEHRDRFCRFGSEYIEAALSAQNRRLLVVDDKEIEDDLVQDMTDVLTSMCARLYGKRS  180

Query  175  AQNRAKRAL  183
            A++RA++A+
Sbjct  181  AKHRARKAV  189


>gi|288921956|ref|ZP_06416167.1| Resolvase domain protein [Frankia sp. EUN1f]
 gi|288346714|gb|EFC81032.1| Resolvase domain protein [Frankia sp. EUN1f]
Length=179

 Score =  233 bits (594),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 119/157 (76%), Positives = 129/157 (83%), Gaps = 1/157 (0%)

Query  15   VTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSSADQKPDLDRQVARV  74
            VTAYRWF  G LPVPAR+ GRLILV+    +R     T VYARVSSADQK DLDRQVARV
Sbjct  4    VTAYRWFREGKLPVPARRVGRLILVEPDAVERPA-GLTVVYARVSSADQKSDLDRQVARV  62

Query  75   TAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHRDRFCRFGSEYVEAA  134
            T WAT +  AVD+VVTEVGSALNGHRRKFLALLRDP V  IVVEHR +F RFG+E VEAA
Sbjct  63   TGWATGQGRAVDRVVTEVGSALNGHRRKFLALLRDPDVSTIVVEHRGKFARFGAENVEAA  122

Query  135  LAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            LAA GREL+VVD AEVDDDLVRDMTEILTS+C R+YG
Sbjct  123  LAANGRELLVVDPAEVDDDLVRDMTEILTSLCVRMYG  159


>gi|240171118|ref|ZP_04749777.1| putative resolvase [Mycobacterium kansasii ATCC 12478]
 gi|296165344|ref|ZP_06847885.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899235|gb|EFG78700.1| resolvase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=193

 Score =  228 bits (580),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 120/193 (63%), Positives = 135/193 (70%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAE  GV R TAYRWF  G LPVPA + GRLILV    +     A   VYARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKAAASVSGAAATVVVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             DQ+ DLDRQVARVTAWAT   + V +VV EVGS LNG R K   +L DP  + IVVEHR
Sbjct  61   HDQRSDLDRQVARVTAWATERDLEVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG E++EAAL+AQGR +VV D  E  DDLVRDM E+LTSMCARLYG+R A+NRA 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVRDMIEVLTSMCARLYGRRGARNRAM  180

Query  181  RALAAAAEESEAA  193
            RA+ A   E  AA
Sbjct  181  RAVTATKREPGAA  193


>gi|340627876|ref|YP_004746328.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340006066|emb|CCC45238.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=295

 Score =  225 bits (573),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 123/172 (72%), Positives = 135/172 (79%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RTAV AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  160

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA GRELVVVDSA+ DDD+V D+TEILTSMCARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADGDDDVVGDITEILTSMCARLYGK  272


>gi|158313451|ref|YP_001505959.1| resolvase domain-containing protein [Frankia sp. EAN1pec]
 gi|158108856|gb|ABW11053.1| Resolvase domain [Frankia sp. EAN1pec]
Length=182

 Score =  219 bits (559),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 114/162 (71%), Positives = 126/162 (78%), Gaps = 1/162 (0%)

Query  10   NGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSSADQKPDLDR  69
            NGV   TA +WF  G LPVPAR+ G LILVD +PA         VYA VSSADQ+ DLDR
Sbjct  2    NGVGYSTARQWFLDGRLPVPARRVGGLILVD-EPARSVPSGTVVVYACVSSADQESDLDR  60

Query  70   QVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHRDRFCRFGSE  129
            QVAR+  W   E +AV KVVTEVGSAL+GHRR+FLALLRDP V  IVVEHRDRF  FG+E
Sbjct  61   QVARIVRWTAGENLAVGKVVTEVGSALDGHRREFLALLRDPEVTTIVVEHRDRFAWFGAE  120

Query  130  YVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYG  171
            YVEAALAA GR L+VVD +EVDDDLVRD+TEILTSMCARLYG
Sbjct  121  YVEAALAASGRRLLVVDPSEVDDDLVRDITEILTSMCARLYG  162


>gi|15608061|ref|NP_215436.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15840344|ref|NP_335381.1| IS1535 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31792109|ref|NP_854602.1| resolvase [Mycobacterium bovis AF2122/97]
 74 more sequence titles
 Length=193

 Score =  218 bits (554),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 114/193 (60%), Positives = 133/193 (69%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAE  GV R TAYRWF  G LPVPA + GRLILV    +  +  A   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             D++ DLDRQVAR+TAWAT   + V +VV EVGS LNG R K   +L DP  + IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG E++EAAL+AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A+NRA 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAEESEAA  193
            RA+  A  E  A 
Sbjct  181  RAVTEAKREPGAG  193


>gi|340625932|ref|YP_004744384.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
 gi|340004122|emb|CCC43259.1| putative resolvase [Mycobacterium canettii CIPT 140010059]
Length=193

 Score =  217 bits (553),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 114/193 (60%), Positives = 133/193 (69%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAE  GV R TAYRWF  G LPVPA + GRLILV    +  +  A   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             D++ DLDRQVAR+TAWAT   + V +VV EVGS LNG R K   +L DP  + IVVEHR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVREVGSGLNGKRPKLRRILSDPDARVIVVEHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG E++EAAL+AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A+NRA 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAEESEAA  193
            RA+  A  E  A 
Sbjct  181  RAVTEAKREPGAG  193


>gi|295696699|ref|YP_003589937.1| Resolvase domain-containing protein [Bacillus tusciae DSM 2912]
 gi|295412301|gb|ADG06793.1| Resolvase domain protein [Bacillus tusciae DSM 2912]
Length=192

 Score =  217 bits (553),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 109/193 (57%), Positives = 139/193 (73%), Gaps = 1/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA + G++ +TA+RW+  G LPVPAR+     ++ D P  R +  RT VYARVSS
Sbjct  1    MKLSDWARQQGISYMTAWRWWKDGKLPVPARQTESGTILVDVPPSR-KDGRTVVYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             DQ+ DLDRQV+R+T WAT   + VD+VVTEVGS +NG R K   +L D  V  I+VEHR
Sbjct  60   HDQRSDLDRQVSRITQWATERDLVVDEVVTEVGSGMNGKRPKLRRILADARVTTIIVEHR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG EY+E+ALAAQGR +VVVDS E  DDLVRDM E+LTS CARLYG+R A+NRA 
Sbjct  120  DRLARFGVEYLESALAAQGRHIVVVDSGETRDDLVRDMIEVLTSFCARLYGRRGARNRAL  179

Query  181  RALAAAAEESEAA  193
            RA+ AA ++ + +
Sbjct  180  RAVTAAKKDGKES  192


>gi|289752977|ref|ZP_06512355.1| resolvase [Mycobacterium tuberculosis EAS054]
 gi|289693564|gb|EFD60993.1| resolvase [Mycobacterium tuberculosis EAS054]
Length=193

 Score =  216 bits (550),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 113/193 (59%), Positives = 133/193 (69%), Gaps = 0/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLA WAE  GV R TAYRWF  G LPVPA + GRLILV    +  +  A   +YARVSS
Sbjct  1    MNLADWAESVGVNRHTAYRWFREGTLPVPAERVGRLILVKTAASASAAAAGVVLYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             D++ DLDRQVAR+TAWAT   + V +VV EVGS LNG R K   +L DP  + IVV+HR
Sbjct  61   HDRRSDLDRQVARLTAWATERDLGVGQVVCEVGSGLNGKRPKLRRILSDPDARVIVVKHR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG E++EAAL+AQGR +VV D  E  DDLV DM E+LT MCARLYG+R A+NRA 
Sbjct  121  DRLARFGVEHLEAALSAQGRRIVVADPGETTDDLVCDMIEVLTGMCARLYGRRGARNRAM  180

Query  181  RALAAAAEESEAA  193
            RA+  A  E  A 
Sbjct  181  RAVTEAKREPGAG  193


>gi|15610023|ref|NP_217402.1| resolvase [Mycobacterium tuberculosis H37Rv]
 gi|15842428|ref|NP_337465.1| IS1539 resolvase [Mycobacterium tuberculosis CDC1551]
 gi|31794062|ref|NP_856555.1| resolvase [Mycobacterium bovis AF2122/97]
 43 more sequence titles
 Length=295

 Score =  211 bits (537),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 123/172 (72%), Positives = 136/172 (80%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RTAV AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  160

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  272


>gi|326904500|gb|EGE51433.1| resolvase [Mycobacterium tuberculosis W-148]
 gi|328457800|gb|AEB03223.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 gi|339295724|gb|AEJ47835.1| resolvase [Mycobacterium tuberculosis CCDC5079]
 gi|339299340|gb|AEJ51450.1| resolvase [Mycobacterium tuberculosis CCDC5180]
Length=223

 Score =  211 bits (537),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 123/172 (72%), Positives = 136/172 (80%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RTAV AR+SS
Sbjct  29   MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  88

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  89   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  148

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  149  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  200


>gi|167969514|ref|ZP_02551791.1| IS1539 resolvase [Mycobacterium tuberculosis H37Ra]
 gi|254551957|ref|ZP_05142404.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|297635503|ref|ZP_06953283.1| resolvase [Mycobacterium tuberculosis KZN 4207]
 25 more sequence titles
 Length=195

 Score =  211 bits (536),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 123/172 (72%), Positives = 136/172 (80%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RTAV AR+SS
Sbjct  1    MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  61   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  121  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  172


>gi|339287910|gb|AEJ42020.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=208

 Score =  210 bits (534),  Expect = 9e-53, Method: Compositional matrix adjust.
 Identities = 104/193 (54%), Positives = 134/193 (70%), Gaps = 1/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA +NG+   TA+RW   G +PVP  +     ++  +P   +  A  A+YARVSS
Sbjct  14   MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVHEPESSTENA-VALYARVSS  72

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQ+AR+  +AT +++ V K VTE+GS LNGHR K + LL +P    IVVEHR
Sbjct  73   ADQKADLDRQIARLMEFATEQKLVVVKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEHR  132

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG EYVEAALAAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A++RAK
Sbjct  133  DRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRAK  192

Query  181  RALAAAAEESEAA  193
            RAL     E  + 
Sbjct  193  RALEVFKREDSSG  205


>gi|148824076|ref|YP_001288829.1| resolvase [Mycobacterium tuberculosis F11]
 gi|148722603|gb|ABR07228.1| hypothetical resolvase [Mycobacterium tuberculosis F11]
Length=295

 Score =  209 bits (533),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 122/172 (71%), Positives = 135/172 (79%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RT V AR+SS
Sbjct  101  MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTVVCARLSS  160

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  161  ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  220

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA GRELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  221  DRLGRFGFECVQAVLAADGRELVVVDSADVDDDVVGDITEILTSICARLYGK  272


>gi|258512473|ref|YP_003185907.1| Resolvase domain-containing protein [Alicyclobacillus acidocaldarius 
subsp. acidocaldarius DSM 446]
 gi|257479199|gb|ACV59518.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius DSM 446]
Length=195

 Score =  209 bits (532),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 102/183 (56%), Positives = 133/183 (73%), Gaps = 1/183 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA +NG++  TA+RW   G +PVP  +     ++  +P   +  A  A+YARVSS
Sbjct  1    MKLSDWARKNGISYKTAWRWVKEGRMPVPFEQTPSGTILVHEPEPSTTNA-VALYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQ+AR+  +A  +++ V K VTE+GS LNGHR K + +L DP+   IVVEHR
Sbjct  60   ADQKADLDRQIARLMEFAMAQKLVVVKAVTEIGSGLNGHRPKLMKMLSDPNAHTIVVEHR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG EYVEAALAAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A++RAK
Sbjct  120  DRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMVEVLTSFCARLYGRRSARHRAK  179

Query  181  RAL  183
            RAL
Sbjct  180  RAL  182


>gi|339290995|gb|AEJ45105.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  209 bits (531),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 104/193 (54%), Positives = 135/193 (70%), Gaps = 1/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA +NG+   TA+RW   G +PVP  +     ++  +P   +  A  A+YARVSS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREPESSTANA-VALYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQ+AR+  +AT +++ V K VTE+GS LNGHR K + LL +P+   IVVEHR
Sbjct  60   ADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPNAHTIVVEHR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG EYVEAALAAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A++RAK
Sbjct  120  DRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRAK  179

Query  181  RALAAAAEESEAA  193
            RAL     E  + 
Sbjct  180  RALEVFKREDSSG  192


>gi|254552945|ref|ZP_05143392.1| resolvase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=158

 Score =  208 bits (529),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 102/135 (76%), Positives = 112/135 (83%), Gaps = 0/135 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNLAVWAERNGVA V AYRWF AGLLPVPA++ GRLILV+D   + S R RT VYARVSS
Sbjct  1    MNLAVWAERNGVAWVIAYRWFRAGLLPVPAQRVGRLILVNDPAVEESGRGRTLVYARVSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQ+ DLDR+VARVTAWAT++ ++VDKVV E G ALNGHRRKF ALL DP V RIVVEHR
Sbjct  61   ADQRSDLDRRVARVTAWATSQHLSVDKVVAEGGWALNGHRRKFFALLGDPVVTRIVVEHR  120

Query  121  DRFCRFGSEYVEAAL  135
            DRFC FGSEYVE  L
Sbjct  121  DRFCWFGSEYVERPL  135


>gi|339290736|gb|AEJ44846.1| Resolvase domain protein [Alicyclobacillus acidocaldarius subsp. 
acidocaldarius Tc-4-1]
Length=195

 Score =  208 bits (529),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 104/193 (54%), Positives = 134/193 (70%), Gaps = 1/193 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA +NG+   TA+RW   G +PVP  +     ++  +P   +  A  A+YARVSS
Sbjct  1    MKLSDWARKNGITYKTAWRWVKEGRMPVPFEQTPSGTILVREPESSTANA-VALYARVSS  59

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQ+AR+  +AT +++ V K VTE+GS LNGHR K + LL +P    IVVEHR
Sbjct  60   ADQKDDLDRQIARLMEFATEQKLVVFKAVTEIGSGLNGHRPKLMKLLSNPDAHTIVVEHR  119

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG EYVEAALAAQGR ++VV+  EV DDLV+DM E+LTS CARLYG+R+A++RAK
Sbjct  120  DRLMRFGFEYVEAALAAQGRRILVVEPGEVKDDLVQDMIEVLTSFCARLYGRRSARHRAK  179

Query  181  RALAAAAEESEAA  193
            RAL     E  + 
Sbjct  180  RALEVFKREDSSG  192


>gi|294994020|ref|ZP_06799711.1| resolvase [Mycobacterium tuberculosis 210]
Length=195

 Score =  207 bits (528),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 122/172 (71%), Positives = 135/172 (79%), Gaps = 0/172 (0%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            MNL VWAE NGVARV AYRW   G LPVPAR+ GR+ILVD+      R  RTAV AR+SS
Sbjct  1    MNLVVWAEGNGVARVIAYRWLRVGRLPVPARRVGRVILVDEPAGQPGRWGRTAVCARLSS  60

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
            ADQK DLDRQV  VTAWAT EQI V KVVTEVGSAL G RR FL LL DP+V+RIV++ R
Sbjct  61   ADQKVDLDRQVVGVTAWATAEQIPVGKVVTEVGSALYGRRRTFLTLLGDPTVRRIVMKRR  120

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGK  172
            DR  RFG E V+A LAA  RELVVVDSA+VDDD+V D+TEILTS+CARLYGK
Sbjct  121  DRLGRFGFECVQAVLAADARELVVVDSADVDDDVVGDITEILTSICARLYGK  172


>gi|218668090|ref|YP_002425577.1| transposon, resolvase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218520303|gb|ACK80889.1| transposon, resolvase [Acidithiobacillus ferrooxidans ATCC 23270]
Length=196

 Score =  207 bits (527),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 103/190 (55%), Positives = 135/190 (72%), Gaps = 2/190 (1%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPARKAGRLILVDDQPADRSRRARTAVYARVSS  60
            M L+ WA+  GV   TA+ WF  G +PVP R+     ++ D P   +   RT VYARVSS
Sbjct  1    MRLSAWAKTQGVTYRTAWEWFKNGTMPVPVRQLSTGTILVDVP--ETPAGRTVVYARVSS  58

Query  61   ADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEHR  120
             DQKP+LD QVAR  A+A    +AV + +TEVGS +NGHR+K L LL D SV+ IVVEHR
Sbjct  59   HDQKPNLDGQVARCVAFANGRGLAVSETITEVGSGMNGHRKKLLRLLGDRSVEHIVVEHR  118

Query  121  DRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRAK  180
            DR  RFG+EYVEAALA +G +L+VVD +E+ DDLV+DM  +LTS CARLYG+R+A++RA+
Sbjct  119  DRLMRFGAEYVEAALAGRGGKLLVVDESELKDDLVQDMISVLTSFCARLYGRRSAKHRAE  178

Query  181  RALAAAAEES  190
            +A+A  A + 
Sbjct  179  KAIAVMAADG  188


>gi|167629538|ref|YP_001680037.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
 gi|167592278|gb|ABZ84026.1| resolvase, n terminal domain [Heliobacterium modesticaldum Ice1]
Length=188

 Score =  207 bits (526),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 104/186 (56%), Positives = 133/186 (72%), Gaps = 4/186 (2%)

Query  1    MNLAVWAERNGVARVTAYRWFHAGLLPVPA-RKAGRLILVDDQPADRSRRARTAVYARVS  59
            M L+ WA++NG+   TA++WF AG LPVPA +     IL+ +         + A+YARVS
Sbjct  1    MKLSEWAKKNGITYRTAWQWFKAGKLPVPAVQMPTGTILIQE---GGKHEGKVALYARVS  57

Query  60   SADQKPDLDRQVARVTAWATTEQIAVDKVVTEVGSALNGHRRKFLALLRDPSVKRIVVEH  119
            SADQK DLDRQV+R+  +A  +   V + VTE+GS LNG R K + LL DP VK IVVEH
Sbjct  58   SADQKSDLDRQVSRLLTYANEQGWDVGEAVTEIGSGLNGRRPKLMKLLADPKVKVIVVEH  117

Query  120  RDRFCRFGSEYVEAALAAQGRELVVVDSAEVDDDLVRDMTEILTSMCARLYGKRAAQNRA  179
            RDR  RFG EYVE+AL AQGR +VVVD +E+ DDLV+DM E+LTS CARLYG+R+A N+A
Sbjct  118  RDRLMRFGFEYVESALVAQGRRIVVVDQSELKDDLVQDMIEVLTSFCARLYGRRSAANKA  177

Query  180  KRALAA  185
            K+A+ A
Sbjct  178  KKAMEA  183



Lambda     K      H
   0.321    0.131    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 195783124132


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40