BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2799
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609936|ref|NP_217315.1| hypothetical protein Rv2799 [Mycoba... 429 1e-118
gi|148823987|ref|YP_001288741.1| hypothetical protein TBFG_12812... 427 3e-118
gi|339632810|ref|YP_004724452.1| hypothetical protein MAF_28040 ... 427 6e-118
gi|289448458|ref|ZP_06438202.1| membrane protein [Mycobacterium ... 426 8e-118
gi|31793975|ref|NP_856468.1| hypothetical protein Mb2822 [Mycoba... 402 2e-110
gi|308374688|ref|ZP_07437009.2| membrane protein [Mycobacterium ... 402 2e-110
gi|308232244|ref|ZP_07415417.2| membrane protein [Mycobacterium ... 394 5e-108
gi|289444347|ref|ZP_06434091.1| membrane protein [Mycobacterium ... 370 1e-100
gi|240171300|ref|ZP_04749959.1| hypothetical protein MkanA1_1845... 342 2e-92
gi|340627799|ref|YP_004746251.1| hypothetical protein MCAN_28261... 338 2e-91
gi|183981924|ref|YP_001850215.1| hypothetical protein MMAR_1911 ... 317 6e-85
gi|118617691|ref|YP_906023.1| hypothetical protein MUL_2135 [Myc... 306 2e-81
gi|342858338|ref|ZP_08714993.1| hypothetical protein MCOL_05671 ... 298 4e-79
gi|254821332|ref|ZP_05226333.1| hypothetical protein MintA_15448... 293 7e-78
gi|118466108|ref|YP_882862.1| hypothetical protein MAV_3685 [Myc... 290 8e-77
gi|41408999|ref|NP_961835.1| hypothetical protein MAP2901 [Mycob... 290 1e-76
gi|336459005|gb|EGO37957.1| Protein of unknown function (DUF3558... 288 5e-76
gi|296171637|ref|ZP_06852851.1| conserved hypothetical protein [... 287 8e-76
gi|118468975|ref|YP_886982.1| hypothetical protein MSMEG_2645 [M... 246 1e-63
gi|108799059|ref|YP_639256.1| hypothetical protein Mmcs_2092 [My... 240 7e-62
gi|120403317|ref|YP_953146.1| hypothetical protein Mvan_2326 [My... 232 2e-59
gi|145224611|ref|YP_001135289.1| hypothetical protein Mflv_4031 ... 226 2e-57
gi|333991192|ref|YP_004523806.1| hypothetical protein JDM601_255... 223 1e-56
gi|289751457|ref|ZP_06510835.1| membrane protein [Mycobacterium ... 198 4e-49
gi|169630202|ref|YP_001703851.1| hypothetical protein MAB_3120 [... 186 2e-45
gi|120609878|ref|YP_969556.1| anti sigma-E protein RseA [Acidovo... 36.2 3.2
gi|259150351|emb|CAY87154.1| Opt2p [Saccharomyces cerevisiae EC1... 36.2 3.4
gi|323335238|gb|EGA76528.1| Opt2p [Saccharomyces cerevisiae Vin13] 35.8 3.7
gi|151942964|gb|EDN61310.1| peptide transporter [Saccharomyces c... 35.8 4.1
gi|67083611|gb|AAY66741.1| putative salivary protein [Ixodes sca... 35.0 6.5
>gi|15609936|ref|NP_217315.1| hypothetical protein Rv2799 [Mycobacterium tuberculosis H37Rv]
gi|15842337|ref|NP_337374.1| hypothetical protein MT2867.1 [Mycobacterium tuberculosis CDC1551]
gi|121638679|ref|YP_978903.1| hypothetical protein BCG_2817 [Mycobacterium bovis BCG str. Pasteur
1173P2]
37 more sequence titles
Length=209
Score = 429 bits (1103), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+YTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE
Sbjct 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF
Sbjct 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
>gi|148823987|ref|YP_001288741.1| hypothetical protein TBFG_12812 [Mycobacterium tuberculosis F11]
gi|148722514|gb|ABR07139.1| hypothetical membrane protein [Mycobacterium tuberculosis F11]
Length=209
Score = 427 bits (1099), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 207/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+YTPGKGPPRAGGVVFTRVRLIGGLGALTA VVVVGTVGWQGIPPAPTGGDAVQLRSTAA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAVVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE
Sbjct 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF
Sbjct 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
>gi|339632810|ref|YP_004724452.1| hypothetical protein MAF_28040 [Mycobacterium africanum GM041182]
gi|339332166|emb|CCC27874.1| putative membrane protein [Mycobacterium africanum GM041182]
Length=209
Score = 427 bits (1097), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 207/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+YTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAV
Sbjct 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVA 120
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF
Sbjct 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
>gi|289448458|ref|ZP_06438202.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289421416|gb|EFD18617.1| membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=209
Score = 426 bits (1096), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 206/209 (99%), Positives = 208/209 (99%), Gaps = 0/209 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+YTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
PMSTTMKSPIVATTDPSPFDPCRDIP DVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE
Sbjct 61 PMSTTMKSPIVATTDPSPFDPCRDIPLDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQ+LF
Sbjct 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQALF 180
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
>gi|31793975|ref|NP_856468.1| hypothetical protein Mb2822 [Mycobacterium bovis AF2122/97]
gi|31619569|emb|CAD95007.1| PROBABLE MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
Length=210
Score = 402 bits (1032), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 204/210 (98%), Positives = 205/210 (98%), Gaps = 1/210 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVG-WQGIPPAPTGGDAVQLRSTA 59
+YTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVV WQGIPPAPTGGDAVQLRSTA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVVGTVGWQGIPPAPTGGDAVQLRSTA 60
Query 60 APMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAV 119
APMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAV
Sbjct 61 APMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAV 120
Query 120 EPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSL 179
EPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSL
Sbjct 121 EPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSL 180
Query 180 FYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
FYSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 181 FYSTVYSEPDVDCPSTNLQRANDLVPYYRF 210
>gi|308374688|ref|ZP_07437009.2| membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308405970|ref|ZP_07494609.2| membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308341087|gb|EFP29938.1| membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308365020|gb|EFP53871.1| membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323718645|gb|EGB27809.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|339295648|gb|AEJ47759.1| membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339299265|gb|AEJ51375.1| membrane protein [Mycobacterium tuberculosis CCDC5180]
Length=195
Score = 402 bits (1032), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 194/195 (99%), Positives = 195/195 (100%), Gaps = 0/195 (0%)
Query 15 VFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT 74
+FTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT
Sbjct 1 MFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT 60
Query 75 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 134
DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD
Sbjct 61 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 120
Query 135 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 194
AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS
Sbjct 121 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 180
Query 195 TNLQRANDLVPYYRF 209
TNLQRANDLVPYYRF
Sbjct 181 TNLQRANDLVPYYRF 195
>gi|308232244|ref|ZP_07415417.2| membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369860|ref|ZP_07419319.2| membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308371131|ref|ZP_07423933.2| membrane protein [Mycobacterium tuberculosis SUMu003]
17 more sequence titles
Length=191
Score = 394 bits (1012), Expect = 5e-108, Method: Compositional matrix adjust.
Identities = 190/191 (99%), Positives = 191/191 (100%), Gaps = 0/191 (0%)
Query 19 VRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATTDPSP 78
+RLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATTDPSP
Sbjct 1 MRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATTDPSP 60
Query 79 FDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIET 138
FDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIET
Sbjct 61 FDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIET 120
Query 139 TIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQ 198
TIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQ
Sbjct 121 TIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQ 180
Query 199 RANDLVPYYRF 209
RANDLVPYYRF
Sbjct 181 RANDLVPYYRF 191
>gi|289444347|ref|ZP_06434091.1| membrane protein [Mycobacterium tuberculosis T46]
gi|289417266|gb|EFD14506.1| membrane protein [Mycobacterium tuberculosis T46]
Length=207
Score = 370 bits (949), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 194/209 (93%), Positives = 197/209 (95%), Gaps = 2/209 (0%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+YTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA
Sbjct 1 MYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE
Sbjct 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF
Sbjct 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDV ++ PYYRF
Sbjct 181 YSTVYSEPDVTARRHCSEQTTR--PYYRF 207
>gi|240171300|ref|ZP_04749959.1| hypothetical protein MkanA1_18456 [Mycobacterium kansasii ATCC
12478]
Length=193
Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/195 (84%), Positives = 173/195 (89%), Gaps = 2/195 (1%)
Query 15 VFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT 74
+F +VRL G LGAL A V GTVGW G +P G +V+LRSTA PMSTTMKSPIVATT
Sbjct 1 MFAKVRLAGALGALVTAAVA-GTVGWHGASASPADG-SVELRSTAEPMSTTMKSPIVATT 58
Query 75 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 134
DPSPFDPC DIPFD +QRLGLAYTPPEAEEGLRCH+DAGNYQ+AVEPI WR+YAQTLP D
Sbjct 59 DPSPFDPCNDIPFDAVQRLGLAYTPPEAEEGLRCHYDAGNYQLAVEPITWRSYAQTLPAD 118
Query 135 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 194
AIETTIAGHRAAQYWV KPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS
Sbjct 119 AIETTIAGHRAAQYWVLKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 178
Query 195 TNLQRANDLVPYYRF 209
TNLQRANDL PYY+F
Sbjct 179 TNLQRANDLAPYYKF 193
>gi|340627799|ref|YP_004746251.1| hypothetical protein MCAN_28261 [Mycobacterium canettii CIPT
140010059]
gi|340005989|emb|CCC45157.1| putative membrane protein [Mycobacterium canettii CIPT 140010059]
Length=191
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/195 (82%), Positives = 175/195 (90%), Gaps = 4/195 (2%)
Query 15 VFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT 74
+ T+VRL+G +GAL A+V+ GWQ PPAPTGG +V+LRSTA P+STTMKSPIV TT
Sbjct 1 MLTKVRLVGAIGALITALVL----GWQCAPPAPTGGGSVELRSTAEPLSTTMKSPIVETT 56
Query 75 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 134
DP PFDPC DIPFD +QRLGLA+TPP+ E+GLRCH+DAGNYQMAVE IIWR+YAQTLPPD
Sbjct 57 DPRPFDPCEDIPFDAVQRLGLAFTPPQHEDGLRCHYDAGNYQMAVEAIIWRSYAQTLPPD 116
Query 135 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 194
AIETTIAGHRAAQYWV KPTYHNSFWY SCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS
Sbjct 117 AIETTIAGHRAAQYWVMKPTYHNSFWYFSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 176
Query 195 TNLQRANDLVPYYRF 209
TNLQRANDLVPYY+F
Sbjct 177 TNLQRANDLVPYYKF 191
>gi|183981924|ref|YP_001850215.1| hypothetical protein MMAR_1911 [Mycobacterium marinum M]
gi|183175250|gb|ACC40360.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=212
Score = 317 bits (812), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 151/209 (73%), Positives = 173/209 (83%), Gaps = 4/209 (1%)
Query 1 LYTPGKGPPRAGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAA 60
+++ + P+AGGVV T+VRL A+V +GWQG+ PAPT G+ + LRST A
Sbjct 8 VHSGQRDRPKAGGVVLTKVRLA----GALGALVAAAVIGWQGVAPAPTRGENIDLRSTTA 63
Query 61 PMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVE 120
P+S+TMKSPIV T + PFD C DIPFD +QRLGLAYTPPE E+GLRCHFDAGNYQMAVE
Sbjct 64 PLSSTMKSPIVETNNVRPFDACEDIPFDAVQRLGLAYTPPEHEDGLRCHFDAGNYQMAVE 123
Query 121 PIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
I+WRTYAQTLPPDA+ETTIAGHRAAQYWV KPTYHNSFW+SSCMVTFKTSYGVIQQSL+
Sbjct 124 TIVWRTYAQTLPPDAVETTIAGHRAAQYWVMKPTYHNSFWFSSCMVTFKTSYGVIQQSLY 183
Query 181 YSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
YSTVYSEPDVDC +TNLQRAN+L PYY F
Sbjct 184 YSTVYSEPDVDCQATNLQRANELAPYYVF 212
>gi|118617691|ref|YP_906023.1| hypothetical protein MUL_2135 [Mycobacterium ulcerans Agy99]
gi|118569801|gb|ABL04552.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=191
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/172 (81%), Positives = 153/172 (89%), Gaps = 0/172 (0%)
Query 38 VGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAY 97
+GWQG+ APT G+ + LRST AP+S+TMKSPIV T + PFD C DIPFD +QRLGLAY
Sbjct 20 IGWQGVASAPTRGENIDLRSTTAPLSSTMKSPIVETNNVRPFDACEDIPFDAVQRLGLAY 79
Query 98 TPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHN 157
TPPE E+GLRCHFDAGNYQMAVE I+WRTYAQTLPPDAIETTIAGHRAAQYWV KPTYHN
Sbjct 80 TPPEHEDGLRCHFDAGNYQMAVETIVWRTYAQTLPPDAIETTIAGHRAAQYWVMKPTYHN 139
Query 158 SFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
SFW+SSCMVTFKTSYGVIQQSL+YSTVYSEPDVDC +TNLQRAN+L PYY F
Sbjct 140 SFWFSSCMVTFKTSYGVIQQSLYYSTVYSEPDVDCQATNLQRANELAPYYVF 191
>gi|342858338|ref|ZP_08714993.1| hypothetical protein MCOL_05671 [Mycobacterium colombiense CECT
3035]
gi|342134042|gb|EGT87222.1| hypothetical protein MCOL_05671 [Mycobacterium colombiense CECT
3035]
Length=188
Score = 298 bits (762), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/189 (76%), Positives = 159/189 (85%), Gaps = 2/189 (1%)
Query 22 IGGLGALTAAVVVVGTVGWQGIPPAPTGGD-AVQLRSTAAPMSTTMKSPIVATTDPSPFD 80
+G LGAL A + GTVG P AP GGD +V+LRSTA PM TTMKSPIVATTDP PFD
Sbjct 1 MGALGALLTAAIG-GTVGLLSGPAAPGGGDRSVELRSTAQPMETTMKSPIVATTDPRPFD 59
Query 81 PCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTI 140
C DIPFDVIQ LGL +TPPE E+GLRCHFDAGNYQ+AVEPIIWRTY Q+LP DA+ETTI
Sbjct 60 ACEDIPFDVIQGLGLGFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTI 119
Query 141 AGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRA 200
AGHRAAQYWV KPTYHNS+W+ SCMV FKTSYGV+QQ+L+YSTVYS P+VDC TNLQRA
Sbjct 120 AGHRAAQYWVLKPTYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRA 179
Query 201 NDLVPYYRF 209
NDL PYY+F
Sbjct 180 NDLAPYYKF 188
>gi|254821332|ref|ZP_05226333.1| hypothetical protein MintA_15448 [Mycobacterium intracellulare
ATCC 13950]
Length=189
Score = 293 bits (751), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/190 (75%), Positives = 159/190 (84%), Gaps = 3/190 (1%)
Query 22 IGGLGALTAAVVVVGTVG-WQGIPPAPTGGDA-VQLRSTAAPMSTTMKSPIVATTDPSPF 79
+G LGAL A + GTVG G P P GGD V+LRSTA PM TTMKSPIVATTDP PF
Sbjct 1 MGALGALLTAAIG-GTVGVLSGSPSLPGGGDRPVELRSTAQPMETTMKSPIVATTDPRPF 59
Query 80 DPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETT 139
D C DIPFDV+QRLGL +TPPE E+GLRCHFDAGNYQ+AVEPIIWRTY +LP DA+ETT
Sbjct 60 DACEDIPFDVVQRLGLGFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEASLPADAVETT 119
Query 140 IAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQR 199
IAGHRAAQYWV KPTYHNS+W+ SCMV FKTSYGV+QQ+L+YSTVYS+P+VDC TNLQR
Sbjct 120 IAGHRAAQYWVLKPTYHNSYWFYSCMVVFKTSYGVLQQALYYSTVYSDPEVDCMQTNLQR 179
Query 200 ANDLVPYYRF 209
ANDL PYY+F
Sbjct 180 ANDLAPYYKF 189
>gi|118466108|ref|YP_882862.1| hypothetical protein MAV_3685 [Mycobacterium avium 104]
gi|254776120|ref|ZP_05217636.1| hypothetical protein MaviaA2_15810 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167395|gb|ABK68292.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=196
Score = 290 bits (742), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/176 (78%), Positives = 151/176 (86%), Gaps = 2/176 (1%)
Query 36 GTVGWQGIPPAPTGGDA--VQLRSTAAPMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRL 93
GT G PPAP GG A V+LRSTA P+ TTMKSPIVATTDP PFDPC DIPFD +Q L
Sbjct 21 GTAGVLSAPPAPDGGAAGPVELRSTAQPLETTMKSPIVATTDPRPFDPCEDIPFDAVQGL 80
Query 94 GLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKP 153
GLA+TPPE E+GLRCHFDAGNYQ+AVEPIIWRTY Q+LP DA+ETTIAGHRAAQYWV KP
Sbjct 81 GLAFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLKP 140
Query 154 TYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
TYHNS+W+ SCMV FKTSYGV+QQ+L+YSTVYS P+VDC TNLQRANDL PYY+F
Sbjct 141 TYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF 196
>gi|41408999|ref|NP_961835.1| hypothetical protein MAP2901 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397358|gb|AAS05218.1| hypothetical protein MAP_2901 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=217
Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/201 (74%), Positives = 166/201 (83%), Gaps = 3/201 (1%)
Query 11 AGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDA--VQLRSTAAPMSTTMKS 68
+GGVVF VRL+G LGAL AA + PPAP GG A V+LRSTA P+ TTMKS
Sbjct 18 SGGVVFANVRLLGALGALLAAAIAGTAGVLSA-PPAPDGGAAGPVELRSTAQPLETTMKS 76
Query 69 PIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYA 128
PIVATTDP PFDPC DIPFD +Q LGLA+TPPE E+GLRCHFDAGNYQ+AVEPIIWRTY
Sbjct 77 PIVATTDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYE 136
Query 129 QTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEP 188
Q+LP DA+ETTIAGHRAAQYWV KPTYHNS+W+ SCMV FKTSYGV+QQ+L+YSTVYS P
Sbjct 137 QSLPADAVETTIAGHRAAQYWVLKPTYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNP 196
Query 189 DVDCPSTNLQRANDLVPYYRF 209
+VDC TNLQRANDL PYY+F
Sbjct 197 EVDCMQTNLQRANDLAPYYKF 217
>gi|336459005|gb|EGO37957.1| Protein of unknown function (DUF3558) [Mycobacterium avium subsp.
paratuberculosis S397]
Length=196
Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/170 (79%), Positives = 149/170 (88%), Gaps = 2/170 (1%)
Query 42 GIPPAPTGGDA--VQLRSTAAPMSTTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTP 99
+PPAP GG A V+LRSTA P+ TTMKSPIVATTDP PFDPC DIPFD +Q LGLA+TP
Sbjct 27 SVPPAPDGGAAGPVELRSTAQPLETTMKSPIVATTDPRPFDPCEDIPFDAVQGLGLAFTP 86
Query 100 PEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSF 159
PE E+GLRCHFDAGNYQ+AVEPIIWRTY Q+LP DA+ETTIAGHRAAQYWV KPTYHNS+
Sbjct 87 PEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLKPTYHNSY 146
Query 160 WYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
W+ SCMV FKTSYGV+QQ+L+YSTVYS P+VDC TNLQRANDL PYY+F
Sbjct 147 WFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF 196
>gi|296171637|ref|ZP_06852851.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295893998|gb|EFG73761.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=194
Score = 287 bits (734), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/195 (77%), Positives = 166/195 (86%), Gaps = 1/195 (0%)
Query 15 VFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPIVATT 74
+F +VRLIG +GA AA + GT GWQG+ P P GG V+LRSTA PM TTMKSPIVATT
Sbjct 1 MFAKVRLIGAVGA-LAAAAIAGTAGWQGVAPGPAGGGRVELRSTAVPMETTMKSPIVATT 59
Query 75 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 134
DP PFD C DIPFD +QRLGLA+TPPE E+GLRCHFDAGNYQ+AVEPIIWRTY TLPPD
Sbjct 60 DPRPFDACEDIPFDAVQRLGLAFTPPEHEDGLRCHFDAGNYQLAVEPIIWRTYEATLPPD 119
Query 135 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 194
A+ETTIAGHRAAQYWV KPTYHNS+WY SCMV FKT YGV+QQ+L+YSTVYS P+VDC S
Sbjct 120 AVETTIAGHRAAQYWVLKPTYHNSYWYYSCMVAFKTGYGVLQQALYYSTVYSNPEVDCMS 179
Query 195 TNLQRANDLVPYYRF 209
TNLQRANDL PYY+F
Sbjct 180 TNLQRANDLAPYYKF 194
>gi|118468975|ref|YP_886982.1| hypothetical protein MSMEG_2645 [Mycobacterium smegmatis str.
MC2 155]
gi|118170262|gb|ABK71158.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=194
Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/195 (62%), Positives = 145/195 (75%), Gaps = 7/195 (3%)
Query 18 RVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPM---STTMKSPIVATT 74
RVRL+ L AL AAV++V WQ P A TG A +L +T PM STT+K P++ TT
Sbjct 4 RVRLLSALCALVAAVILV----WQTDPVAGTGSAAPRLDATDLPMTNVSTTIKWPVIETT 59
Query 75 DPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPD 134
DP PFDPC DIP DVI+R+GLA+TPP E+GLRCH+DAGNYQMAVE +WRTY QT+P D
Sbjct 60 DPKPFDPCNDIPIDVIERIGLAWTPPMPEDGLRCHYDAGNYQMAVEAFVWRTYEQTIPAD 119
Query 135 AIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPS 194
A+E I GHRAAQYWV KPT N W+++CM+ F TSYGVIQQSLFYS ++S DC
Sbjct 120 ALELDIDGHRAAQYWVMKPTDWNDRWWTTCMIAFDTSYGVIQQSLFYSPIHSPDKPDCLQ 179
Query 195 TNLQRANDLVPYYRF 209
TNLQRA++L PYY+F
Sbjct 180 TNLQRAHELAPYYKF 194
>gi|108799059|ref|YP_639256.1| hypothetical protein Mmcs_2092 [Mycobacterium sp. MCS]
gi|119868174|ref|YP_938126.1| hypothetical protein Mkms_2138 [Mycobacterium sp. KMS]
gi|126434662|ref|YP_001070353.1| hypothetical protein Mjls_2075 [Mycobacterium sp. JLS]
gi|108769478|gb|ABG08200.1| putative membrane protein [Mycobacterium sp. MCS]
gi|119694263|gb|ABL91336.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234462|gb|ABN97862.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=193
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/197 (60%), Positives = 146/197 (75%), Gaps = 12/197 (6%)
Query 18 RVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDA---VQLRSTAAPM--STTMKSPIVA 72
++R++ L AL AAV+VV I PTG A V LRST P+ STT+K P+V
Sbjct 4 KLRVLSALCALFAAVMVV-------IATNPTGESATGRVDLRSTFLPLTGSTTIKYPVVE 56
Query 73 TTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLP 132
T DPSPFDPCRDIPFDV+QR GLAYTPP E+ LRC +DAGNYQM +E +WRTY +TLP
Sbjct 57 TVDPSPFDPCRDIPFDVVQRAGLAYTPPAPEDALRCKYDAGNYQMTIEAFVWRTYEETLP 116
Query 133 PDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDC 192
PDA++ IAGHRAAQYW+ KPT N+ W+++C V F TSYGVIQQ LFYS +YS+PDVDC
Sbjct 117 PDAVQLDIAGHRAAQYWIMKPTDWNNRWWTTCAVAFDTSYGVIQQVLFYSPIYSQPDVDC 176
Query 193 PSTNLQRANDLVPYYRF 209
TNLQ+A++L P+Y +
Sbjct 177 MQTNLQKAHELAPHYIY 193
>gi|120403317|ref|YP_953146.1| hypothetical protein Mvan_2326 [Mycobacterium vanbaalenii PYR-1]
gi|119956135|gb|ABM13140.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=194
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/173 (64%), Positives = 131/173 (76%), Gaps = 3/173 (1%)
Query 40 WQGIPPAPTGGDAVQLRSTAAPM---STTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLA 96
WQ P G V LRST AP+ +TT+KSP++ TDP PFDPCRDIP DV+ R+GLA
Sbjct 22 WQTTPGGVAGPGPVDLRSTFAPLPAATTTIKSPVIDLTDPDPFDPCRDIPLDVVARIGLA 81
Query 97 YTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYH 156
YTPP E+ LRC +DAGNYQMAVE +WRTY +TLPPDA+E I GHRAAQYW+ KPT
Sbjct 82 YTPPAHEDSLRCKYDAGNYQMAVEAFVWRTYEETLPPDAVELDINGHRAAQYWIMKPTDW 141
Query 157 NSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
N+ W+ +CMV FKTSYGVIQQSLFYS +YSEPD DC TNLQRA++L +Y +
Sbjct 142 NNRWWITCMVAFKTSYGVIQQSLFYSPIYSEPDPDCMQTNLQRAHELSAHYIY 194
>gi|145224611|ref|YP_001135289.1| hypothetical protein Mflv_4031 [Mycobacterium gilvum PYR-GCK]
gi|315444942|ref|YP_004077821.1| hypothetical protein Mspyr1_33750 [Mycobacterium sp. Spyr1]
gi|145217097|gb|ABP46501.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315263245|gb|ADT99986.1| hypothetical protein Mspyr1_33750 [Mycobacterium sp. Spyr1]
Length=200
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/166 (64%), Positives = 128/166 (78%), Gaps = 9/166 (5%)
Query 53 VQLRSTAAPM---------STTMKSPIVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAE 103
V LRST AP+ STT+KSP++ TDP PF+PCRDIP D +QR+GLAYTPP E
Sbjct 35 VDLRSTFAPLPDATPPPYASTTIKSPVIDLTDPDPFNPCRDIPLDAVQRIGLAYTPPTQE 94
Query 104 EGLRCHFDAGNYQMAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSS 163
+ LRC +DAGNYQMAVE +WRTY ++LPPDA+E I GHRAAQ+W+ KPT N+ W+ +
Sbjct 95 DSLRCKYDAGNYQMAVETFVWRTYEESLPPDAVELDINGHRAAQFWIMKPTDWNNRWWIT 154
Query 164 CMVTFKTSYGVIQQSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
CMV F+TSYGVIQQSLFYS +YSEPD DC TNLQRA++L PYY +
Sbjct 155 CMVAFQTSYGVIQQSLFYSPIYSEPDPDCMQTNLQRAHELSPYYIY 200
>gi|333991192|ref|YP_004523806.1| hypothetical protein JDM601_2552 [Mycobacterium sp. JDM601]
gi|333487160|gb|AEF36552.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=196
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/200 (56%), Positives = 137/200 (69%), Gaps = 9/200 (4%)
Query 15 VFTRVRLIGGLGALTAAVVVVGTVGWQGIPPA----PTGGDAVQLRSTAAPMSTT-MKSP 69
+ T++RL AL A+V+V WQ P G VQLRSTAAP++ S
Sbjct 1 MLTKLRLATAFSALAMAIVMV----WQQTPTGDGADAAGAHGVQLRSTAAPLAPPPTSSK 56
Query 70 IVATTDPSPFDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDAGNYQMAVEPIIWRTYAQ 129
V T+P PFD C DIP DVI +LGLA+TPP+ EG+RC FDAGNYQMAVE +WR+Y +
Sbjct 57 PVNLTNPRPFDACEDIPLDVIAQLGLAFTPPKPVEGVRCEFDAGNYQMAVETFVWRSYDE 116
Query 130 TLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPD 189
++P DAIE I GHRAAQYWV KPT N+ W+ SCMV FKTSYG+IQQSL+YS VYS PD
Sbjct 117 SIPADAIEMDINGHRAAQYWVMKPTEWNNRWWFSCMVAFKTSYGLIQQSLYYSPVYSNPD 176
Query 190 VDCPSTNLQRANDLVPYYRF 209
DC + NL RA+ L P+Y++
Sbjct 177 TDCQTENLMRAHQLAPHYKY 196
>gi|289751457|ref|ZP_06510835.1| membrane protein [Mycobacterium tuberculosis T92]
gi|289692044|gb|EFD59473.1| membrane protein [Mycobacterium tuberculosis T92]
Length=93
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 117 MAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQ 176
MAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQ
Sbjct 1 MAVEPIIWRTYAQTLPPDAIETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQ 60
Query 177 QSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 209
QSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF
Sbjct 61 QSLFYSTVYSEPDVDCPSTNLQRANDLVPYYRF 93
>gi|169630202|ref|YP_001703851.1| hypothetical protein MAB_3120 [Mycobacterium abscessus ATCC 19977]
gi|169242169|emb|CAM63197.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=206
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/193 (53%), Positives = 126/193 (66%), Gaps = 11/193 (5%)
Query 27 ALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMS--------TTMKSPIVATTDPSP 78
AL A V+ + TV W+ P T VQLR + APM+ TT+K P+V TDP P
Sbjct 15 ALVALVLSIVTV-WRTAPAEHTASAPVQLRFSTAPMTGPANTGATTTIKWPVVPVTDPRP 73
Query 79 FDPCRDIPFDVIQRLGLAYTPPEAEEGLRCHFDA-GNYQMAVEPIIWRTYAQTLPPDAIE 137
FDPC DIP VI GL TPP EEGLRC +D+ NYQ+AVE ++WRTY +LP D +E
Sbjct 74 FDPCFDIPSSVIAAAGLDQTPPAPEEGLRCRYDSRNNYQLAVEAVVWRTYEDSLPADGVE 133
Query 138 TTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLFYSTVYSEPD-VDCPSTN 196
TTIAGHRAA+Y + KPT N+ W+ SCM+TFKTSYGV+QQSL+Y++ PD C N
Sbjct 134 TTIAGHRAAEYNIMKPTDWNNQWWVSCMITFKTSYGVVQQSLYYASQKYSPDGPGCLVEN 193
Query 197 LQRANDLVPYYRF 209
+ AN L P Y+F
Sbjct 194 RRVANILAPSYKF 206
>gi|120609878|ref|YP_969556.1| anti sigma-E protein RseA [Acidovorax citrulli AAC00-1]
gi|120588342|gb|ABM31782.1| anti sigma-E protein, RseA [Acidovorax citrulli AAC00-1]
Length=207
Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/82 (31%), Positives = 40/82 (49%), Gaps = 7/82 (8%)
Query 11 AGGVVFTRVRLIGGLGALTAAVVVVGTVGWQGIPPAPTGGDAVQLRSTAAPMSTTMKSPI 70
A VF R +++ GL +L A VG +GW G+ P+ G +L + + M + +
Sbjct 101 ANAAVF-RWKMVAGLASLAA----VGVLGWSGLSGGPSAGGETRLAAVPSRMEVPAATTL 155
Query 71 VATTDPS--PFDPCRDIPFDVI 90
V+ TDP+ P RD D +
Sbjct 156 VSATDPAGEPQVMLRDPRLDEL 177
>gi|259150351|emb|CAY87154.1| Opt2p [Saccharomyces cerevisiae EC1118]
Length=877
Score = 36.2 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 21/69 (31%), Positives = 35/69 (51%), Gaps = 6/69 (8%)
Query 122 IIWRTYAQTLPPDAIETTIAGHRAA----QYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQ 177
I + +A+T+P I TI G + + W +K ++ Y+ C TF T Y ++ Q
Sbjct 206 ICGKAWAKTIPCWTI--TIRGRKYGINIDKPWTQKEQMFSTLLYAICQGTFYTHYNILTQ 263
Query 178 SLFYSTVYS 186
LFY + +S
Sbjct 264 KLFYHSAFS 272
>gi|323335238|gb|EGA76528.1| Opt2p [Saccharomyces cerevisiae Vin13]
Length=820
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/69 (31%), Positives = 35/69 (51%), Gaps = 6/69 (8%)
Query 122 IIWRTYAQTLPPDAIETTIAGHRAA----QYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQ 177
I + +A+T+P I TI G + + W +K ++ Y+ C TF T Y ++ Q
Sbjct 149 ICGKAWAKTIPCWTI--TIRGRKYGINIDKPWTQKEQMFSTLLYAICQGTFYTHYNILTQ 206
Query 178 SLFYSTVYS 186
LFY + +S
Sbjct 207 KLFYHSAFS 215
>gi|151942964|gb|EDN61310.1| peptide transporter [Saccharomyces cerevisiae YJM789]
Length=877
Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 21/69 (31%), Positives = 35/69 (51%), Gaps = 6/69 (8%)
Query 122 IIWRTYAQTLPPDAIETTIAGHRAA----QYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQ 177
I + +A+T+P AI TI G + + W +K ++ Y+ C F T Y ++ Q
Sbjct 206 ICGKAWAKTIPCWAI--TIRGRKYGINIDKPWTQKEQMFSTLLYAICQGAFYTHYNILTQ 263
Query 178 SLFYSTVYS 186
LFY + +S
Sbjct 264 KLFYHSAFS 272
>gi|67083611|gb|AAY66741.1| putative salivary protein [Ixodes scapularis]
Length=205
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/45 (34%), Positives = 24/45 (54%), Gaps = 2/45 (4%)
Query 136 IETTIAGHRAAQYWVRKPTYHNSFWYSSCMVTFKTSYGVIQQSLF 180
+E+T+ G R +WV+K NS W+ C + F GV Q ++
Sbjct 148 LESTVGGRRGCAWWVKKSAKDNSLWH--CRLIFDFFCGVSYQQIY 190
Lambda K H
0.320 0.137 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 242769087144
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40