BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2803

Length=155
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842341|ref|NP_337378.1|  hypothetical protein MT2871 [Mycoba...   313    8e-84
gi|307085503|ref|ZP_07494616.1|  hypothetical protein TMLG_02519 ...   308    2e-82
gi|306807392|ref|ZP_07444060.1|  hypothetical protein TMGG_02066 ...   307    4e-82
gi|289444352|ref|ZP_06434096.1|  conserved hypothetical protein [...   257    4e-67
gi|308232248|ref|ZP_07664041.1|  hypothetical protein TMAG_03186 ...   181    5e-44
gi|340627803|ref|YP_004746255.1|  hypothetical protein MCAN_28301...   174    3e-42
gi|339630981|ref|YP_004722623.1|  hypothetical protein MAF_09270 ...  61.6    4e-08
gi|15608058|ref|NP_215433.1|  hypothetical protein Rv0918 [Mycoba...  61.2    5e-08
gi|31792106|ref|NP_854599.1|  hypothetical protein Mb0942 [Mycoba...  61.2    5e-08
gi|15840340|ref|NP_335377.1|  hypothetical protein MT0944 [Mycoba...  61.2    5e-08
gi|308231671|ref|ZP_07413385.2|  hypothetical protein TMAG_00854 ...  60.5    8e-08
gi|284046619|ref|YP_003396959.1|  hypothetical protein Cwoe_5176 ...  57.0    9e-07
gi|115523508|ref|YP_780419.1|  hypothetical protein RPE_1489 [Rho...  53.5    1e-05
gi|240169137|ref|ZP_04747796.1|  hypothetical protein MkanA1_0747...  53.1    2e-05
gi|195940729|ref|ZP_03086111.1|  hypothetical protein Escherichco...  52.4    2e-05
gi|295096280|emb|CBK85370.1|  Uncharacterized protein conserved i...  51.2    5e-05
gi|28870551|ref|NP_793170.1|  hypothetical protein PSPTO_3387 [Ps...  50.8    7e-05
gi|312796568|ref|YP_004029490.1|  hypothetical protein RBRH_03874...  50.8    7e-05
gi|296136922|ref|YP_003644164.1|  Protein of unknown function DUF...  50.4    9e-05
gi|344201192|ref|YP_004785518.1|  hypothetical protein Acife_3122...  50.4    9e-05
gi|320095182|ref|ZP_08026888.1|  hypothetical protein HMPREF9005_...  50.1    1e-04
gi|296444852|ref|ZP_06886814.1|  Protein of unknown function DUF1...  50.1    1e-04
gi|16416903|gb|AAL18462.1|  unknown [Photorhabdus luminescens]        50.1    1e-04
gi|294341098|emb|CAZ89499.1|  conserved hypothetical protein [Thi...  49.7    2e-04
gi|145221381|ref|YP_001132059.1|  hypothetical protein Mflv_0786 ...  49.3    2e-04
gi|332290225|ref|YP_004421077.1|  hypothetical protein UMN179_021...  48.9    3e-04
gi|315441736|ref|YP_004074615.1|  hypothetical protein Mspyr1_004...  48.9    3e-04
gi|333988665|ref|YP_004521279.1|  hypothetical protein JDM601_002...  48.1    4e-04
gi|257092510|ref|YP_003166151.1|  hypothetical protein CAP2UW1_08...  47.8    5e-04
gi|336178777|ref|YP_004584152.1|  hypothetical protein FsymDg_290...  47.4    7e-04
gi|261339083|ref|ZP_05966941.1|  hypothetical protein ENTCAN_0529...  47.4    7e-04
gi|344337719|ref|ZP_08768653.1|  protein of unknown function DUF1...  47.4    7e-04
gi|90425040|ref|YP_533410.1|  hypothetical protein RPC_3552 [Rhod...  47.4    7e-04
gi|113461920|ref|YP_719989.1|  hypothetical protein HS_1784 [Haem...  47.4    7e-04
gi|56476541|ref|YP_158130.1|  hypothetical protein ebB58 [Aromato...  47.4    8e-04
gi|62182065|ref|YP_218482.1|  hypothetical protein SC3495 [Salmon...  47.0    9e-04
gi|186474558|ref|YP_001863529.1|  hypothetical protein Bphy_7544 ...  47.0    0.001
gi|239621893|ref|ZP_04664924.1|  predicted protein [Bifidobacteri...  47.0    0.001
gi|302344014|ref|YP_003808543.1|  hypothetical protein Deba_2595 ...  47.0    0.001
gi|296101097|ref|YP_003611243.1|  hypothetical protein ECL_00730 ...  47.0    0.001
gi|15803971|ref|NP_290007.1|  hypothetical protein Z4833 [Escheri...  46.6    0.001
gi|331649266|ref|ZP_08350352.1|  toxin-antitoxin system, antitoxi...  46.2    0.002
gi|194336777|ref|YP_002018571.1|  hypothetical protein Ppha_1718 ...  46.2    0.002
gi|154508312|ref|ZP_02043954.1|  hypothetical protein ACTODO_0080...  46.2    0.002
gi|58616239|ref|YP_195368.1|  hypothetical protein p1B137 [Azoarc...  46.2    0.002
gi|71275774|ref|ZP_00652058.1|  conserved hypothetical protein [X...  46.2    0.002
gi|334112599|ref|ZP_08486858.1|  protein of unknown function DUF1...  45.8    0.002
gi|170680065|ref|YP_001742568.1|  hypothetical protein EcSMS35_04...  45.8    0.002
gi|170766789|ref|ZP_02901242.1|  conserved hypothetical protein [...  45.8    0.002
gi|300937041|ref|ZP_07151907.1|  toxin-antitoxin system protein [...  45.8    0.002


>gi|15842341|ref|NP_337378.1| hypothetical protein MT2871 [Mycobacterium tuberculosis CDC1551]
 gi|31793979|ref|NP_856472.1| hypothetical protein Mb2826 [Mycobacterium bovis AF2122/97]
 gi|57117026|ref|YP_177678.1| hypothetical protein Rv2803 [Mycobacterium tuberculosis H37Rv]
 58 more sequence titles
 Length=155

 Score =  313 bits (801),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 155/155 (100%), Positives = 155/155 (100%), Gaps = 0/155 (0%)

Query  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60
            MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV
Sbjct  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60

Query  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120
            YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL
Sbjct  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120

Query  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH
Sbjct  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH  155


>gi|307085503|ref|ZP_07494616.1| hypothetical protein TMLG_02519 [Mycobacterium tuberculosis SUMu012]
 gi|308364960|gb|EFP53811.1| hypothetical protein TMLG_02519 [Mycobacterium tuberculosis SUMu012]
Length=180

 Score =  308 bits (788),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)

Query  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60
            MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV
Sbjct  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60

Query  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120
            YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL
Sbjct  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120

Query  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP  154
            SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP
Sbjct  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP  154


>gi|306807392|ref|ZP_07444060.1| hypothetical protein TMGG_02066 [Mycobacterium tuberculosis SUMu007]
 gi|308346195|gb|EFP35046.1| hypothetical protein TMGG_02066 [Mycobacterium tuberculosis SUMu007]
Length=274

 Score =  307 bits (786),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)

Query  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60
            MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV
Sbjct  1    MTCPSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQTSTKYV  60

Query  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120
            YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL
Sbjct  61   YITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIEL  120

Query  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP  154
            SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP
Sbjct  121  SEAAFRRFVAALDEPDEAAPELVRLARRKSRIPP  154


>gi|289444352|ref|ZP_06434096.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289417271|gb|EFD14511.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=157

 Score =  257 bits (656),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 139/160 (87%), Positives = 139/160 (87%), Gaps = 8/160 (5%)

Query  1    MTC-----PSLVGLRTEAAELSYSDQPDALGVAMRERREQQNLVRPPRRNASRRINTDQT  55
            MTC     PS    R  AAELSYSDQ  A     R   EQQNLVRPPRRNASRRINTDQT
Sbjct  1    MTCHDLPEPSRTAHR--AAELSYSDQRRARSGDARTS-EQQNLVRPPRRNASRRINTDQT  57

Query  56   STKYVYITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARA  115
            STKYVYITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARA
Sbjct  58   STKYVYITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARA  117

Query  116  NRIELSEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            NRIELSEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH
Sbjct  118  NRIELSEAAFRRFVAALDEPDEAAPELVRLARRKSRIPPH  157


>gi|308232248|ref|ZP_07664041.1| hypothetical protein TMAG_03186 [Mycobacterium tuberculosis SUMu001]
 gi|308369864|ref|ZP_07419323.2| hypothetical protein TMBG_02938 [Mycobacterium tuberculosis SUMu002]
 gi|308371134|ref|ZP_07667098.1| hypothetical protein TMCG_02049 [Mycobacterium tuberculosis SUMu003]
 11 more sequence titles
 Length=91

 Score =  181 bits (458),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA
Sbjct  1    MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  60

Query  125  FRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            FRRFVAALDEPDEAAPELVRLARRKSRIPPH
Sbjct  61   FRRFVAALDEPDEAAPELVRLARRKSRIPPH  91


>gi|340627803|ref|YP_004746255.1| hypothetical protein MCAN_28301 [Mycobacterium canettii CIPT 
140010059]
 gi|340005993|emb|CCC45161.1| putative uncharacterized protein [Mycobacterium canettii CIPT 
140010059]
Length=91

 Score =  174 bits (442),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 89/91 (98%), Positives = 89/91 (98%), Gaps = 0/91 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            MPETLTGRLNFRLSPEQEQALR AAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA
Sbjct  1    MPETLTGRLNFRLSPEQEQALRRAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  60

Query  125  FRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            FRRFVAALDEPDEAAPELVRLARRKSRIP H
Sbjct  61   FRRFVAALDEPDEAAPELVRLARRKSRIPAH  91


>gi|339630981|ref|YP_004722623.1| hypothetical protein MAF_09270 [Mycobacterium africanum GM041182]
 gi|339330337|emb|CCC25999.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=151

 Score = 61.6 bits (148),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 48/80 (60%), Gaps = 0/80 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            PE  T RL  RL+PEQ+  +R AA   G  L+ F ++AA+ HA D+LA      L++AA+
Sbjct  61   PERKTERLAARLTPEQDALIRRAAEAEGTDLTNFTVTAALAHARDVLADRRLFVLTDAAW  120

Query  126  RRFVAALDEPDEAAPELVRL  145
              F+AALD P    P L +L
Sbjct  121  TEFLAALDRPVSHKPRLEKL  140


>gi|15608058|ref|NP_215433.1| hypothetical protein Rv0918 [Mycobacterium tuberculosis H37Rv]
 gi|148660697|ref|YP_001282220.1| hypothetical protein MRA_0926 [Mycobacterium tuberculosis H37Ra]
 gi|148822127|ref|YP_001286881.1| hypothetical protein TBFG_10936 [Mycobacterium tuberculosis F11]
 18 more sequence titles
 Length=158

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 48/80 (60%), Gaps = 0/80 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            PE  T RL  RL+PEQ+  +R AA   G  L+ F ++AA+ HA D+LA      L++AA+
Sbjct  68   PERKTERLAARLTPEQDALIRRAAEAEGTDLTNFTVTAALAHARDVLADRRLFVLTDAAW  127

Query  126  RRFVAALDEPDEAAPELVRL  145
              F+AALD P    P L +L
Sbjct  128  TEFLAALDRPVSHKPRLEKL  147


>gi|31792106|ref|NP_854599.1| hypothetical protein Mb0942 [Mycobacterium bovis AF2122/97]
 gi|121636841|ref|YP_977064.1| hypothetical protein BCG_0970 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989312|ref|YP_002643999.1| hypothetical protein JTY_0940 [Mycobacterium bovis BCG str. Tokyo 
172]
 26 more sequence titles
 Length=158

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 48/80 (60%), Gaps = 0/80 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            PE  T RL  RL+PEQ+  +R AA   G  L+ F ++AA+ HA D+LA      L++AA+
Sbjct  68   PERKTERLAARLTPEQDALIRRAAEAEGTDLTNFTVTAALAHARDVLADRRLFVLTDAAW  127

Query  126  RRFVAALDEPDEAAPELVRL  145
              F+AALD P    P L +L
Sbjct  128  TEFLAALDRPVSHKPRLEKL  147


>gi|15840340|ref|NP_335377.1| hypothetical protein MT0944 [Mycobacterium tuberculosis CDC1551]
 gi|13880504|gb|AAK45191.1| hypothetical protein MT0944 [Mycobacterium tuberculosis CDC1551]
Length=178

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 48/80 (60%), Gaps = 0/80 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            PE  T RL  RL+PEQ+  +R AA   G  L+ F ++AA+ HA D+LA      L++AA+
Sbjct  88   PERKTERLAARLTPEQDALIRRAAEAEGTDLTNFTVTAALAHARDVLADRRLFVLTDAAW  147

Query  126  RRFVAALDEPDEAAPELVRL  145
              F+AALD P    P L +L
Sbjct  148  TEFLAALDRPVSHKPRLEKL  167


>gi|308231671|ref|ZP_07413385.2| hypothetical protein TMAG_00854 [Mycobacterium tuberculosis SUMu001]
 gi|308370126|ref|ZP_07420376.2| hypothetical protein TMBG_01699 [Mycobacterium tuberculosis SUMu002]
 gi|308370536|ref|ZP_07421917.2| hypothetical protein TMCG_03176 [Mycobacterium tuberculosis SUMu003]
 22 more sequence titles
 Length=95

 Score = 60.5 bits (145),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 48/80 (60%), Gaps = 0/80 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            PE  T RL  RL+PEQ+  +R AA   G  L+ F ++AA+ HA D+LA      L++AA+
Sbjct  5    PERKTERLAARLTPEQDALIRRAAEAEGTDLTNFTVTAALAHARDVLADRRLFVLTDAAW  64

Query  126  RRFVAALDEPDEAAPELVRL  145
              F+AALD P    P L +L
Sbjct  65   TEFLAALDRPVSHKPRLEKL  84


>gi|284046619|ref|YP_003396959.1| hypothetical protein Cwoe_5176 [Conexibacter woesei DSM 14684]
 gi|283950840|gb|ADB53584.1| Protein of unknown function DUF1778 [Conexibacter woesei DSM 
14684]
Length=99

 Score = 57.0 bits (136),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 43/77 (56%), Gaps = 0/77 (0%)

Query  59   YVYITYMPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRI  118
            Y +  YM      RL  R+ P+++Q L  AA  T Q+LS FVL AA  HA ++LA    I
Sbjct  2    YCHSEYMATVKDERLQIRVDPQRKQLLERAADATHQNLSAFVLQAAAQHAEEVLAERTVI  61

Query  119  ELSEAAFRRFVAALDEP  135
            +LS  A R F  AL +P
Sbjct  62   QLSPQAARAFTDALAQP  78


>gi|115523508|ref|YP_780419.1| hypothetical protein RPE_1489 [Rhodopseudomonas palustris BisA53]
 gi|115517455|gb|ABJ05439.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length=91

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 35/91 (39%), Positives = 50/91 (55%), Gaps = 2/91 (2%)

Query  65   MPETLT--GRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSE  122
            MP  +T  GR+  RL PE +  L  AAAL  + L+G++L   +  A   +A A R+ LSE
Sbjct  1    MPRAVTDNGRVELRLRPEDKATLTRAAALKRRDLTGYILEMVLPRAEADIAEAERMTLSE  60

Query  123  AAFRRFVAALDEPDEAAPELVRLARRKSRIP  153
                R +A L+ P  A+  LVR A+   R+P
Sbjct  61   RDSLRVLALLENPPAASDRLVRAAKAGFRLP  91


>gi|240169137|ref|ZP_04747796.1| hypothetical protein MkanA1_07474 [Mycobacterium kansasii ATCC 
12478]
Length=129

 Score = 53.1 bits (126),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 38/113 (34%), Positives = 54/113 (48%), Gaps = 1/113 (0%)

Query  33   REQQNLVRPPRRNASRRINTDQTSTKYVYITYMPETLTGRLNFRLSPEQEQALRHAAALT  92
            R   +L  PPR    R    D   T   Y + + ET +GR + R++  Q+  +R    +T
Sbjct  9    RAAADLGTPPRAELHRSALADGMYTNSAYTSGV-ETKSGRWHLRVTAAQDAVVRRVLDVT  67

Query  93   GQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAALDEPDEAAPELVRL  145
            G+SL+ +V+  AV  A   LA      L +AA+    A LD P    PEL RL
Sbjct  68   GESLNDYVVRHAVQAAEADLADRRVFVLDDAAWTDLQALLDRPPSPKPELARL  120


>gi|195940729|ref|ZP_03086111.1| hypothetical protein EscherichcoliO157_30772 [Escherichia coli 
O157:H7 str. EC4024]
 gi|334122551|ref|ZP_08496588.1| hypothetical protein HMPREF9086_0846 [Enterobacter hormaechei 
ATCC 49162]
 gi|333391910|gb|EGK63018.1| hypothetical protein HMPREF9086_0846 [Enterobacter hormaechei 
ATCC 49162]
Length=89

 Score = 52.4 bits (124),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 27/84 (33%), Positives = 51/84 (61%), Gaps = 0/84 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            MP     R++ RLS E +  +  AAA+T Q+++ F++++A + A +++ +  R+ L+EA+
Sbjct  1    MPALKKQRIDLRLSDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEAS  60

Query  125  FRRFVAALDEPDEAAPELVRLARR  148
            +   + A+D P E    L R A+R
Sbjct  61   WNAVMDAIDNPPEPNERLKRAAKR  84


>gi|295096280|emb|CBK85370.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae 
subsp. cloacae NCTC 9394]
Length=89

 Score = 51.2 bits (121),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 27/84 (33%), Positives = 51/84 (61%), Gaps = 0/84 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            MP     R++ RLS E +  +  AAA+T Q+++ F++++A + A +++ +  R+ L+EA+
Sbjct  1    MPALKKQRIDLRLSDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEAS  60

Query  125  FRRFVAALDEPDEAAPELVRLARR  148
            +   + A+D P E    L R A+R
Sbjct  61   WIAVMDAIDNPPEPNERLKRAAKR  84


>gi|28870551|ref|NP_793170.1| hypothetical protein PSPTO_3387 [Pseudomonas syringae pv. tomato 
str. DC3000]
 gi|28853799|gb|AAO56865.1| conserved protein of unknown function [Pseudomonas syringae pv. 
tomato str. DC3000]
 gi|331017295|gb|EGH97351.1| hypothetical protein PLA106_14708 [Pseudomonas syringae pv. lachrymans 
str. M302278PT]
Length=109

 Score = 50.8 bits (120),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 28/81 (35%), Positives = 47/81 (59%), Gaps = 3/81 (3%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            T RL  + +   ++ +R AA ++G  ++ F++++A + A  ++    RIELSE AF R  
Sbjct  13   TARLEIKTTDFAKEFIRKAATVSGLDMTAFIMASAFEKAEVVMENHRRIELSEKAFSRLH  72

Query  130  AALDEPDEAA---PELVRLAR  147
              L+E D  A   PEL++L R
Sbjct  73   EILNEEDTDATPTPELLKLMR  93


>gi|312796568|ref|YP_004029490.1| hypothetical protein RBRH_03874 [Burkholderia rhizoxinica HKI 
454]
 gi|312168343|emb|CBW75346.1| Hypothetical protein RBRH_03874 [Burkholderia rhizoxinica HKI 
454]
Length=96

 Score = 50.8 bits (120),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 31/93 (34%), Positives = 47/93 (51%), Gaps = 2/93 (2%)

Query  60   VYITYMPETLT--GRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANR  117
            +Y+ Y+   +     +N R  PEQ   + HAA+L G++ S F+L  A + A  ++     
Sbjct  1    MYLLYIQGAIMRDAAINLRALPEQRDLIDHAASLLGKNRSDFMLEVACERAQAVVLDRVF  60

Query  118  IELSEAAFRRFVAALDEPDEAAPELVRLARRKS  150
              L    F++FVA LD P  A P L RL   K+
Sbjct  61   FHLDADKFQQFVAMLDAPQSANPGLKRLMNIKA  93


>gi|296136922|ref|YP_003644164.1| Protein of unknown function DUF1778 [Thiomonas intermedia K12]
 gi|295797044|gb|ADG31834.1| Protein of unknown function DUF1778 [Thiomonas intermedia K12]
Length=90

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 40/78 (52%), Gaps = 0/78 (0%)

Query  73   LNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAAL  132
            +N R  PEQ   + HAA+L G++ S F+L AA D A  ++       L    F++F A L
Sbjct  6    INLRALPEQRDLIDHAASLLGKNRSDFMLEAACDRAQSVVLNQVFFSLDTDKFKQFTAML  65

Query  133  DEPDEAAPELVRLARRKS  150
            D P    P L RL   K+
Sbjct  66   DAPIGPNPGLERLMSVKA  83


>gi|344201192|ref|YP_004785518.1| hypothetical protein Acife_3122 [Acidithiobacillus ferrivorans 
SS3]
 gi|343776636|gb|AEM49192.1| protein of unknown function DUF1778 [Acidithiobacillus ferrivorans 
SS3]
Length=86

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 33/88 (38%), Positives = 51/88 (58%), Gaps = 6/88 (6%)

Query  65   MPETL-TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEA  123
            M  TL T R+N R S E +  +  AAAL G ++SGF+L  A D A  ++   + + LS++
Sbjct  1    MSTTLETTRINLRASAEAKALIEQAAALMGTTVSGFMLQNAYDAARKVVIEHDTMRLSQS  60

Query  124  AFRRFVAALDE---PDEAAPELVRLARR  148
            AF+ FV+  ++   P+ A   L  +ARR
Sbjct  61   AFQAFVSTCEQTPTPNAALQSL--MARR  86


>gi|320095182|ref|ZP_08026888.1| hypothetical protein HMPREF9005_1500 [Actinomyces sp. oral taxon 
178 str. F0338]
 gi|319977887|gb|EFW09524.1| hypothetical protein HMPREF9005_1500 [Actinomyces sp. oral taxon 
178 str. F0338]
Length=97

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 33/91 (37%), Positives = 46/91 (51%), Gaps = 0/91 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            MP   T R++ R++  Q   +R AAALT +S+S FVL++A   A   LA      +SE  
Sbjct  1    MPPAKTHRMDLRVTERQNLLIRQAAALTDRSVSDFVLTSATLEAQRALADQRVFPVSEDQ  60

Query  125  FRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            F  F   +D P    P+L +L  R S    H
Sbjct  61   FAHFQEIVDRPVTDMPKLRKLLNRPSPFGKH  91


>gi|296444852|ref|ZP_06886814.1| Protein of unknown function DUF1778 [Methylosinus trichosporium 
OB3b]
 gi|296257520|gb|EFH04585.1| Protein of unknown function DUF1778 [Methylosinus trichosporium 
OB3b]
Length=91

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 30/78 (39%), Positives = 44/78 (57%), Gaps = 0/78 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            TGR+  RL PE +  L  AAAL    L+ F+L AA+  A D++A++ R++LSE    R +
Sbjct  8    TGRVELRLKPEDKAVLARAAALERLDLTSFILRAALPRAQDVIAQSERLKLSERDSLRVL  67

Query  130  AALDEPDEAAPELVRLAR  147
              L+ P      L R A+
Sbjct  68   DLLENPPAPTERLTRAAK  85


>gi|16416903|gb|AAL18462.1| unknown [Photorhabdus luminescens]
Length=89

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 26/88 (30%), Positives = 49/88 (56%), Gaps = 3/88 (3%)

Query  68   TLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRR  127
            T   R + ++  ++ + + HAAAL G +++ FV +AA + A +LL R +RI ++   F+ 
Sbjct  2    TAITRFDLKMDTDEREVISHAAALMGTTMAAFVRTAAKEKARELLGRDSRITMTVQDFQA  61

Query  128  FVAALDE---PDEAAPELVRLARRKSRI  152
            F  AL++   P+ A    +   R+  R+
Sbjct  62   FTTALNDAFTPNAALQNAINAVRKVKRV  89


>gi|294341098|emb|CAZ89499.1| conserved hypothetical protein [Thiomonas sp. 3As]
Length=90

 Score = 49.7 bits (117),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 40/78 (52%), Gaps = 0/78 (0%)

Query  73   LNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAAL  132
            +N R  PEQ   + HAA+L G++ S F+L AA D A  ++       L    F++F A L
Sbjct  6    INLRALPEQRDLIDHAASLLGKNRSDFMLEAACDRAQSVVLDQVFFSLDTEKFKQFTAML  65

Query  133  DEPDEAAPELVRLARRKS  150
            D P    P L RL   K+
Sbjct  66   DAPIGPNPGLERLMSVKA  83


>gi|145221381|ref|YP_001132059.1| hypothetical protein Mflv_0786 [Mycobacterium gilvum PYR-GCK]
 gi|145213867|gb|ABP43271.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=101

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 27/74 (37%), Positives = 40/74 (55%), Gaps = 0/74 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R   RL+ EQ+  +R AA + G  L+ F L+A + HA ++LA      L E A+  F++ 
Sbjct  19   RFAVRLTAEQDALIRRAAEVEGTDLTNFTLTATLAHAREVLADRRLFMLGEPAWSEFLSV  78

Query  132  LDEPDEAAPELVRL  145
            LD P    P L +L
Sbjct  79   LDRPVSPKPRLAKL  92


>gi|332290225|ref|YP_004421077.1| hypothetical protein UMN179_02167 [Gallibacterium anatis UMN179]
 gi|330433121|gb|AEC18180.1| hypothetical protein UMN179_02167 [Gallibacterium anatis UMN179]
Length=86

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 25/81 (31%), Positives = 43/81 (54%), Gaps = 0/81 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            T  +N R  P Q   + +AA+L G++ S F+L AA  +A +++      +L++  F RF+
Sbjct  3    TAAINLRAEPSQRDLIDYAASLLGKTQSDFMLDAACIYAQNVILDRTVFQLNDEKFNRFI  62

Query  130  AALDEPDEAAPELVRLARRKS  150
              L++P      L +L   KS
Sbjct  63   EILEQPHSTNAGLEKLMNIKS  83


>gi|315441736|ref|YP_004074615.1| hypothetical protein Mspyr1_00440 [Mycobacterium sp. Spyr1]
 gi|315260039|gb|ADT96780.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=92

 Score = 48.9 bits (115),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 27/74 (37%), Positives = 40/74 (55%), Gaps = 0/74 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R   RL+ EQ+  +R AA + G  L+ F L+A + HA ++LA      L E A+  F++ 
Sbjct  10   RFAVRLTAEQDALIRRAAEVEGTDLTNFTLTATLAHAREVLADRRLFMLGEPAWSEFLSV  69

Query  132  LDEPDEAAPELVRL  145
            LD P    P L +L
Sbjct  70   LDRPVSPKPRLAKL  83


>gi|333988665|ref|YP_004521279.1| hypothetical protein JDM601_0025 [Mycobacterium sp. JDM601]
 gi|333484633|gb|AEF34025.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=87

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 27/76 (36%), Positives = 41/76 (54%), Gaps = 0/76 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            T R   RL+ EQ+  +R AA + G  L+ F ++A + HA ++LA      L  +A+  FV
Sbjct  3    TERFAVRLTAEQDALIRRAAEVEGTDLTNFTVTATLAHAREVLADRRLFMLDASAWSEFV  62

Query  130  AALDEPDEAAPELVRL  145
            + LD P    P L +L
Sbjct  63   SVLDRPVSQQPRLEKL  78


>gi|257092510|ref|YP_003166151.1| hypothetical protein CAP2UW1_0885 [Candidatus Accumulibacter 
phosphatis clade IIA str. UW-1]
 gi|257045034|gb|ACV34222.1| Protein of unknown function DUF1778 [Candidatus Accumulibacter 
phosphatis clade IIA str. UW-1]
Length=92

 Score = 47.8 bits (112),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 29/73 (40%), Positives = 37/73 (51%), Gaps = 0/73 (0%)

Query  73   LNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAAL  132
            +N R  PEQ   + HAA L G++ S F+L AA D A  ++       L E  FR+F   L
Sbjct  6    INLRALPEQRDLIDHAAQLLGKNRSDFMLEAACDRAQAVVLDQVFFALDEDKFRQFTQLL  65

Query  133  DEPDEAAPELVRL  145
            D P    P L RL
Sbjct  66   DAPPARNPGLERL  78


>gi|336178777|ref|YP_004584152.1| hypothetical protein FsymDg_2905 [Frankia symbiont of Datisca 
glomerata]
 gi|334859757|gb|AEH10231.1| protein of unknown function DUF1778 [Frankia symbiont of Datisca 
glomerata]
Length=87

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 29/81 (36%), Positives = 42/81 (52%), Gaps = 0/81 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            + R+  RL  EQ+  +R AA + G +++ F ++AAV  A D+LA      L   A+  F+
Sbjct  4    SSRIAVRLPEEQDALIRAAAEVEGSTVTEFTVNAAVARAKDVLADQRLFTLGSEAWTEFL  63

Query  130  AALDEPDEAAPELVRLARRKS  150
              LD P    P L RL   KS
Sbjct  64   TILDRPVTRKPRLERLFTEKS  84


>gi|261339083|ref|ZP_05966941.1| hypothetical protein ENTCAN_05295 [Enterobacter cancerogenus 
ATCC 35316]
 gi|288318918|gb|EFC57856.1| toxin-antitoxin system, antitoxin component [Enterobacter cancerogenus 
ATCC 35316]
Length=89

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 26/77 (34%), Positives = 46/77 (60%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RLS + +  +  AAA+T QS+S F++S A + A +++ R  R+ L+EA++   + A
Sbjct  8    RIDLRLSEDDKSLIEEAAAMTNQSISQFMVSTASERAAEVIDRHRRMILNEASWNTVMEA  67

Query  132  LDEPDEAAPELVRLARR  148
            +  P      L R A+R
Sbjct  68   ISNPPAPNDRLKRAAKR  84


>gi|344337719|ref|ZP_08768653.1| protein of unknown function DUF1778 [Thiocapsa marina 5811]
 gi|343802672|gb|EGV20612.1| protein of unknown function DUF1778 [Thiocapsa marina 5811]
Length=96

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 32/89 (36%), Positives = 48/89 (54%), Gaps = 0/89 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            P+  + +L+ RL+PE +  L  AA    QS+  FVLS+A++ A + LA      L+   +
Sbjct  4    PQARSTKLDLRLTPEAKARLSAAAWERHQSVGQFVLSSALERADETLADRRHFGLNAERW  63

Query  126  RRFVAALDEPDEAAPELVRLARRKSRIPP  154
              F+AAL+ P  A P L RL R  +   P
Sbjct  64   SAFMAALEMPPRALPRLERLLREPTPFDP  92


>gi|90425040|ref|YP_533410.1| hypothetical protein RPC_3552 [Rhodopseudomonas palustris BisB18]
 gi|90107054|gb|ABD89091.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length=95

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 29/74 (40%), Positives = 42/74 (57%), Gaps = 0/74 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            +L+ RL+PE ++ L  AA  + +S+S FVL +A+D A + L       L  A +  F+AA
Sbjct  9    KLDLRLTPEAKRLLNAAAQASRRSVSEFVLESALDRAQEALPDRQHFGLDAAGWEAFLAA  68

Query  132  LDEPDEAAPELVRL  145
            LD P    P L RL
Sbjct  69   LDAPPRPLPRLQRL  82


>gi|113461920|ref|YP_719989.1| hypothetical protein HS_1784 [Haemophilus somnus 129PT]
 gi|112823963|gb|ABI26052.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length=87

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 20/67 (30%), Positives = 38/67 (57%), Gaps = 0/67 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            T  +N R+ P+Q   + +AA+L G++ S F+L  A  +A +++      +L E  F  F+
Sbjct  3    TAAINLRVQPKQRDLIDYAASLLGKTRSDFMLDVACTYAQNVILDRTVFQLDEGKFNHFI  62

Query  130  AALDEPD  136
              L++P+
Sbjct  63   EVLEQPN  69


>gi|56476541|ref|YP_158130.1| hypothetical protein ebB58 [Aromatoleum aromaticum EbN1]
 gi|56312584|emb|CAI07229.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=90

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 28/73 (39%), Positives = 38/73 (53%), Gaps = 0/73 (0%)

Query  73   LNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAAL  132
            +N R  PEQ   + HAA+L G++ S F+L AA D A  ++       L    F++F A L
Sbjct  6    INLRALPEQRDLIDHAASLLGKNRSDFMLEAACDRAQAVVLDQVFFGLDADKFKQFTAML  65

Query  133  DEPDEAAPELVRL  145
            D P    P L RL
Sbjct  66   DAPPGPNPGLERL  78


>gi|62182065|ref|YP_218482.1| hypothetical protein SC3495 [Salmonella enterica subsp. enterica 
serovar Choleraesuis str. SC-B67]
 gi|224585358|ref|YP_002639157.1| hypothetical protein SPC_3635 [Salmonella enterica subsp. enterica 
serovar Paratyphi C strain RKS4594]
 gi|62129698|gb|AAX67401.1| orf; hypothetical protein [Salmonella enterica subsp. enterica 
serovar Choleraesuis str. SC-B67]
 gi|224469886|gb|ACN47716.1| hypothetical protein SPC_3635 [Salmonella enterica subsp. enterica 
serovar Paratyphi C strain RKS4594]
 gi|322716553|gb|EFZ08124.1| hypothetical protein SCA50_3717 [Salmonella enterica subsp. enterica 
serovar Choleraesuis str. SCSA50]
Length=89

 Score = 47.0 bits (110),  Expect = 9e-04, Method: Compositional matrix adjust.
 Identities = 26/77 (34%), Positives = 48/77 (63%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RL+   +  +  AAA+T QS++ F+L++A + A ++L +  R+ L+EA++ R + A
Sbjct  8    RIDLRLTDGDKSMIEEAAAITNQSITQFMLNSAAERAAEVLEQHRRVILNEASWARVMDA  67

Query  132  LDEPDEAAPELVRLARR  148
            L  P     +L R A+R
Sbjct  68   LSHPPTPNEKLKRAAQR  84


>gi|186474558|ref|YP_001863529.1| hypothetical protein Bphy_7544 [Burkholderia phymatum STM815]
 gi|184198517|gb|ACC76479.1| Protein of unknown function DUF1778 [Burkholderia phymatum STM815]
Length=94

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 36/86 (42%), Positives = 49/86 (57%), Gaps = 1/86 (1%)

Query  68   TLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRR  127
            T T RL  R+SPE  + LR AA L G+SLS FV+SAA D A  ++     ++L+    +R
Sbjct  3    TTTARLEARISPETRELLRRAAELQGRSLSDFVVSAAQDAALRVIFERELLQLALDDQQR  62

Query  128  FVAALDEPDEAAPELVR-LARRKSRI  152
            F  +L  P E A  L    ARR++ I
Sbjct  63   FAESLLAPAEPADALRHAFARRRTLI  88


>gi|239621893|ref|ZP_04664924.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 
52486]
 gi|239515084|gb|EEQ54951.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 
52486]
Length=92

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 27/77 (36%), Positives = 42/77 (55%), Gaps = 1/77 (1%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            + RLN RL+PEQ Q +  AA+L G S++ + +   V  A   +       L   AF  F+
Sbjct  11   SSRLNMRLTPEQRQTIDMAASLKGSSITQWAIDHLVTDARRDIEEETVTRLPSKAFDEFL  70

Query  130  AALDEP-DEAAPELVRL  145
             ALD+P  +AA +L+ +
Sbjct  71   KALDKPMPQAARDLIDM  87


>gi|302344014|ref|YP_003808543.1| hypothetical protein Deba_2595 [Desulfarculus baarsii DSM 2075]
 gi|301640627|gb|ADK85949.1| Protein of unknown function DUF1778 [Desulfarculus baarsii DSM 
2075]
Length=92

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 28/79 (36%), Positives = 43/79 (55%), Gaps = 0/79 (0%)

Query  67   ETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFR  126
            +T T R++ RLSP  +  L+ AA  T +++S F+L A +  A+  LA      L EA ++
Sbjct  6    QTKTERIDVRLSPSSKALLQEAAKATHKNVSEFILEAGIVAANQALAERRIFLLDEARWK  65

Query  127  RFVAALDEPDEAAPELVRL  145
             F   LD P +  P L +L
Sbjct  66   EFQEVLDRPVQKKPRLGKL  84


>gi|296101097|ref|YP_003611243.1| hypothetical protein ECL_00730 [Enterobacter cloacae subsp. cloacae 
ATCC 13047]
 gi|295055556|gb|ADF60294.1| hypothetical protein ECL_00730 [Enterobacter cloacae subsp. cloacae 
ATCC 13047]
Length=89

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/77 (33%), Positives = 47/77 (62%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RL+ + +  +  AAA+T QS+S F++S A + A +++ +  R+ L+EA++ + + A
Sbjct  8    RIDLRLTEDDKSLIEEAAAMTNQSISQFMVSTASERAAEVIEQHRRLILNEASWNQVMDA  67

Query  132  LDEPDEAAPELVRLARR  148
            +  P      L R ARR
Sbjct  68   ISNPPTPNERLKRAARR  84


>gi|15803971|ref|NP_290007.1| hypothetical protein Z4833 [Escherichia coli O157:H7 EDL933]
 gi|15833562|ref|NP_312335.1| hypothetical protein ECs4308 [Escherichia coli O157:H7 str. Sakai]
 gi|157157355|ref|YP_001464924.1| hypothetical protein EcE24377A_3941 [Escherichia coli E24377A]
 72 more sequence titles
 Length=88

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 24/77 (32%), Positives = 47/77 (62%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RL+ + +  +  AAA++ QS+S F+L++A   A +++ +  R+ L+E ++ R + A
Sbjct  8    RIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQHRRVILNEESWTRVMDA  67

Query  132  LDEPDEAAPELVRLARR  148
            L  P     +L R A+R
Sbjct  68   LSNPPSPGEKLKRAAKR  84


>gi|331649266|ref|ZP_08350352.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix 
fold protein [Escherichia coli M605]
 gi|281180488|dbj|BAI56818.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|330909500|gb|EGH38014.1| hypothetical protein ECAA86_03707 [Escherichia coli AA86]
 gi|331041764|gb|EGI13908.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix 
fold protein [Escherichia coli M605]
 gi|333971602|gb|AEG38407.1| Hypothetical protein ECNA114_3568 [Escherichia coli NA114]
Length=88

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 24/77 (32%), Positives = 47/77 (62%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RL+ + +  +  AAA++ QS+S F+L++A   A +++ +  R+ L+E ++ R + A
Sbjct  8    RIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQHRRMILTEESWTRVMDA  67

Query  132  LDEPDEAAPELVRLARR  148
            L  P     +L R A+R
Sbjct  68   LSNPPSPGEKLKRAAKR  84


>gi|194336777|ref|YP_002018571.1| hypothetical protein Ppha_1718 [Pelodictyon phaeoclathratiforme 
BU-1]
 gi|194309254|gb|ACF43954.1| Protein of unknown function DUF1778 [Pelodictyon phaeoclathratiforme 
BU-1]
Length=92

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 29/81 (36%), Positives = 44/81 (55%), Gaps = 0/81 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            T +L+ RLS + +Q LR AA  + ++LS FVL +A+  A + LA      L    +  F+
Sbjct  8    TEKLDLRLSQQAKQVLRSAAIASNRTLSEFVLESALSRAEETLADRRSFSLDVTQWTAFI  67

Query  130  AALDEPDEAAPELVRLARRKS  150
            AALD      P L +L + +S
Sbjct  68   AALDASPRELPRLKKLFQEQS  88


>gi|154508312|ref|ZP_02043954.1| hypothetical protein ACTODO_00809 [Actinomyces odontolyticus 
ATCC 17982]
 gi|153797946|gb|EDN80366.1| hypothetical protein ACTODO_00809 [Actinomyces odontolyticus 
ATCC 17982]
Length=102

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 32/91 (36%), Positives = 44/91 (49%), Gaps = 0/91 (0%)

Query  65   MPETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAA  124
            M  T T RL+ RL+ EQ+  +R AA    +S+S FVLS A   A   LA      +++  
Sbjct  1    MSTTKTERLDLRLTKEQDALIRRAAEQDARSISDFVLSTATLEAQRRLADQRIFFMNDEQ  60

Query  125  FRRFVAALDEPDEAAPELVRLARRKSRIPPH  155
            + RF   L  P    P+L +L  R S    H
Sbjct  61   YARFEEILQTPPTDDPKLRKLFERPSPFGTH  91


>gi|58616239|ref|YP_195368.1| hypothetical protein p1B137 [Azoarcus sp. EbN1]
 gi|56315700|emb|CAI10344.1| conserved hypothetical protein, with unknown function [Aromatoleum 
aromaticum EbN1]
Length=93

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 29/79 (37%), Positives = 44/79 (56%), Gaps = 0/79 (0%)

Query  66   PETLTGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAF  125
            P T T RL  R+SP+    L+ AA + G++++ FV++A  D A   + +A  I LS A  
Sbjct  3    PTTSTARLEARISPDLHALLKRAAEIQGRTMTDFVVTAVKDAAQKAIEQAEVIRLSLADQ  62

Query  126  RRFVAALDEPDEAAPELVR  144
            +RF  AL  P + +  L R
Sbjct  63   QRFADALLSPPKPSTALKR  81


>gi|71275774|ref|ZP_00652058.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
 gi|170730120|ref|YP_001775553.1| hypothetical protein Xfasm12_0946 [Xylella fastidiosa M12]
 gi|71163352|gb|EAO13070.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
 gi|167964913|gb|ACA11923.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length=90

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 27/78 (35%), Positives = 39/78 (50%), Gaps = 0/78 (0%)

Query  73   LNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAAL  132
            +N R  PEQ   +  AA L G++ S F+L AA + A  ++       L E  FR+F   L
Sbjct  6    INLRAMPEQRDLIDQAANLLGKNRSDFMLEAACERAKAIILDQVFFNLDEERFRQFTVLL  65

Query  133  DEPDEAAPELVRLARRKS  150
            + P +  P L RL   K+
Sbjct  66   NAPQDTNPGLNRLMAIKA  83


>gi|334112599|ref|ZP_08486858.1| protein of unknown function DUF1778 [Methylomicrobium album BG8]
 gi|333597353|gb|EGL02190.1| protein of unknown function DUF1778 [Methylomicrobium album BG8]
Length=96

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 28/86 (33%), Positives = 47/86 (55%), Gaps = 0/86 (0%)

Query  70   TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFV  129
            + R++ R+ P+ ++AL+ AA L  +++S F+L  A+  A+++LA      L+   +  F 
Sbjct  7    SDRIDLRIDPKAKEALQAAALLKHKTVSEFILENALSAANEVLADRRYFVLNAEQWEAFQ  66

Query  130  AALDEPDEAAPELVRLARRKSRIPPH  155
            AALD P  A P L RL +       H
Sbjct  67   AALDAPPRALPRLERLMKEPGFFDVH  92


>gi|170680065|ref|YP_001742568.1| hypothetical protein EcSMS35_0467 [Escherichia coli SMS-3-5]
 gi|170517783|gb|ACB15961.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|323965113|gb|EGB60572.1| hypothetical protein ERJG_03471 [Escherichia coli M863]
 gi|323976089|gb|EGB71182.1| hypothetical protein ERFG_03021 [Escherichia coli TW10509]
Length=103

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 48/94 (52%), Gaps = 1/94 (1%)

Query  58   KYVYITYMPETL-TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARAN  116
            K V +  + +TL   R+  + SP+ +  LR AA   G  LS F+LSAA++ A  +L    
Sbjct  4    KTVALPDIDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLDNQR  63

Query  117  RIELSEAAFRRFVAALDEPDEAAPELVRLARRKS  150
            R ELS  ++      + EP +    L  L +RK+
Sbjct  64   RRELSNQSWELMNQLIAEPAQPTLALKALMKRKN  97


>gi|170766789|ref|ZP_02901242.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170124227|gb|EDS93158.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length=88

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 24/77 (32%), Positives = 47/77 (62%), Gaps = 0/77 (0%)

Query  72   RLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARANRIELSEAAFRRFVAA  131
            R++ RL+ + +  +  AAA++ QS+S F+L++A   A +++ +  R+ L+E ++ R + A
Sbjct  8    RIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQHRRMILNEESWTRVMDA  67

Query  132  LDEPDEAAPELVRLARR  148
            L  P     +L R A+R
Sbjct  68   LSNPPSPGEKLKRAAKR  84


>gi|300937041|ref|ZP_07151907.1| toxin-antitoxin system protein [Escherichia coli MS 21-1]
 gi|300457872|gb|EFK21365.1| toxin-antitoxin system protein [Escherichia coli MS 21-1]
 gi|327254753|gb|EGE66369.1| hypothetical protein ECSTEC7V_0509 [Escherichia coli STEC_7v]
Length=119

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 31/94 (33%), Positives = 48/94 (52%), Gaps = 1/94 (1%)

Query  58   KYVYITYMPETL-TGRLNFRLSPEQEQALRHAAALTGQSLSGFVLSAAVDHAHDLLARAN  116
            K V +  + +TL   R+  + SP+ +  LR AA   G  LS F+LSAA++ A  +L    
Sbjct  20   KTVALPDIDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLDNQR  79

Query  117  RIELSEAAFRRFVAALDEPDEAAPELVRLARRKS  150
            R ELS  ++      + EP +    L  L +RK+
Sbjct  80   RRELSNQSWELMNQLIAEPAQPTLALKALMKRKN  113



Lambda     K      H
   0.318    0.130    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130643968916


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40