BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2810c Length=133 Score E Sequences producing significant alignments: (Bits) Value gi|15609947|ref|NP_217326.1| transposase [Mycobacterium tubercul... 270 4e-71 gi|148823999|ref|YP_001288753.1| transposase [Mycobacterium tube... 268 2e-70 gi|289448471|ref|ZP_06438215.1| transposase [Mycobacterium tuber... 267 4e-70 gi|148662652|ref|YP_001284175.1| putative transposase [Mycobacte... 215 2e-54 gi|308374695|ref|ZP_07437021.2| LOW QUALITY PROTEIN: transposase... 205 1e-51 gi|50953773|ref|YP_061211.1| truncated IS1555 transposase [Mycob... 113 8e-24 gi|340793271|ref|YP_004758734.1| transposase for insertion seque... 107 7e-22 gi|340795655|ref|YP_004761118.1| transposase for insertion seque... 102 2e-20 gi|340795397|ref|YP_004760860.1| transposase for insertion seque... 102 2e-20 gi|262200083|ref|YP_003271291.1| transposase IS204/IS1001/IS1096... 102 2e-20 gi|343926042|ref|ZP_08765555.1| putative transposase [Gordonia a... 102 2e-20 gi|326382392|ref|ZP_08204084.1| transposase IS204/IS1001/IS1096/... 101 4e-20 gi|256832661|ref|YP_003161388.1| transposase IS204/IS1001/IS1096... 100 6e-20 gi|343925704|ref|ZP_08765220.1| putative transposase [Gordonia a... 100 9e-20 gi|255325194|ref|ZP_05366300.1| transposase [Corynebacterium tub... 97.4 7e-19 gi|77454838|ref|YP_345706.1| putative transposase [Rhodococcus e... 97.1 7e-19 gi|319951125|ref|ZP_08024973.1| putative transposase [Dietzia ci... 96.7 1e-18 gi|297627257|ref|YP_003689020.1| transposase [Propionibacterium ... 93.6 1e-17 gi|8517285|gb|AAC28267.2| transposase [Arthrobacter sp. TM1] 90.9 6e-17 gi|340794326|ref|YP_004759789.1| transposase for insertion seque... 90.1 1e-16 gi|314927695|gb|EFS91526.1| conserved hypothetical protein [Prop... 89.7 1e-16 gi|340794341|ref|YP_004759804.1| transposase for insertion seque... 89.4 2e-16 gi|340794356|ref|YP_004759819.1| transposase for insertion seque... 89.0 2e-16 gi|239918291|ref|YP_002957849.1| transposase family protein [Mic... 89.0 2e-16 gi|281413817|ref|ZP_06245559.1| transposase family protein [Micr... 88.6 2e-16 gi|297625497|ref|YP_003687260.1| transposase [Propionibacterium ... 88.6 3e-16 gi|340794352|ref|YP_004759815.1| transposase for insertion seque... 88.2 3e-16 gi|154507560|ref|ZP_02043202.1| hypothetical protein ACTODO_0003... 88.2 3e-16 gi|308178789|ref|YP_003918195.1| transposase of ISAar42, ISL3 fa... 88.2 3e-16 gi|297626832|ref|YP_003688595.1| transposase [Propionibacterium ... 87.8 5e-16 gi|297627459|ref|YP_003689222.1| transposase [Propionibacterium ... 87.8 5e-16 gi|239917428|ref|YP_002956986.1| transposase [Micrococcus luteus... 87.8 5e-16 gi|340793781|ref|YP_004759244.1| transposase for insertion seque... 87.4 7e-16 gi|260905941|ref|ZP_05914263.1| transposase family protein [Brev... 87.0 9e-16 gi|297625512|ref|YP_003687275.1| transposase [Propionibacterium ... 87.0 9e-16 gi|308177159|ref|YP_003916565.1| transposase of ISAar20, ISL3 fa... 86.7 1e-15 gi|306818350|ref|ZP_07452076.1| conserved hypothetical protein [... 86.7 1e-15 gi|260904527|ref|ZP_05912849.1| transposase family protein [Brev... 86.7 1e-15 gi|256825340|ref|YP_003149300.1| transposase family protein [Kyt... 86.7 1e-15 gi|256826066|ref|YP_003150026.1| transposase family protein [Kyt... 86.3 1e-15 gi|256824563|ref|YP_003148523.1| transposase family protein [Kyt... 86.3 1e-15 gi|226860316|gb|ACO88870.1| transposase [Microbacterium sp. MA1]... 86.3 1e-15 gi|256826127|ref|YP_003150087.1| transposase family protein [Kyt... 85.9 2e-15 gi|315606220|ref|ZP_07881245.1| transposase [Actinomyces sp. ora... 85.9 2e-15 gi|297627420|ref|YP_003689183.1| transposase [Propionibacterium ... 85.9 2e-15 gi|308176597|ref|YP_003916003.1| transposase of ISAar20, ISL3 fa... 85.9 2e-15 gi|150005|gb|AAA98489.1| ORF2 [Mycobacterium smegmatis] >gi|8239... 85.9 2e-15 gi|118467651|ref|YP_887999.1| IS1096, tnpA protein [Mycobacteriu... 85.9 2e-15 gi|308178189|ref|YP_003917595.1| transposase of ISAar20, ISL3 fa... 85.9 2e-15 gi|306818387|ref|ZP_07452113.1| transposase [Mobiluncus mulieris... 85.5 2e-15 >gi|15609947|ref|NP_217326.1| transposase [Mycobacterium tuberculosis H37Rv] gi|289575510|ref|ZP_06455737.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] gi|339632821|ref|YP_004724463.1| transposase [Mycobacterium africanum GM041182] gi|1648911|emb|CAB03637.1| PROBABLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv] gi|289539941|gb|EFD44519.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis K85] gi|339332177|emb|CCC27885.1| putative transposase [Mycobacterium africanum GM041182] Length=133 Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%) Query 1 PLRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPV 60 PLRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPV Sbjct 1 PLRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPV 60 Query 61 VLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSL 120 VLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSL Sbjct 61 VLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSL 120 Query 121 LHCGNLAQLIHAL 133 LHCGNLAQLIHAL Sbjct 121 LHCGNLAQLIHAL 133 >gi|148823999|ref|YP_001288753.1| transposase [Mycobacterium tuberculosis F11] gi|253798105|ref|YP_003031106.1| transposase [Mycobacterium tuberculosis KZN 1435] gi|254232906|ref|ZP_04926233.1| hypothetical protein TBCG_02746 [Mycobacterium tuberculosis C] 25 more sequence titles Length=132 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%) Query 2 LRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV 61 +RLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV Sbjct 1 MRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV 60 Query 62 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL 121 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL Sbjct 61 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL 120 Query 122 HCGNLAQLIHAL 133 HCGNLAQLIHAL Sbjct 121 HCGNLAQLIHAL 132 >gi|289448471|ref|ZP_06438215.1| transposase [Mycobacterium tuberculosis CPHL_A] gi|289421429|gb|EFD18630.1| transposase [Mycobacterium tuberculosis CPHL_A] Length=132 Score = 267 bits (682), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 130/132 (99%), Positives = 131/132 (99%), Gaps = 0/132 (0%) Query 2 LRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV 61 +RLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV Sbjct 1 MRLQAHTGGPPVALRQETTGGPSPTNDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVV 60 Query 62 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL 121 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL Sbjct 61 LEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLL 120 Query 122 HCGNLAQLIHAL 133 HCGNLAQLIHA Sbjct 121 HCGNLAQLIHAF 132 >gi|148662652|ref|YP_001284175.1| putative transposase [Mycobacterium tuberculosis H37Ra] gi|148506804|gb|ABQ74613.1| putative transposase [Mycobacterium tuberculosis H37Ra] Length=105 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 104/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%) Query 29 LITEPPRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHAS 88 +ITEPPRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHAS Sbjct 1 MITEPPRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHAS 60 Query 89 NGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 NGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL Sbjct 61 NGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 105 >gi|308374695|ref|ZP_07437021.2| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis SUMu006] gi|308341099|gb|EFP29950.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis SUMu006] Length=100 Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%) Query 34 PRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTE 93 PRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTE Sbjct 1 PRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTE 60 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL Sbjct 61 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 100 >gi|50953773|ref|YP_061211.1| truncated IS1555 transposase [Mycobacterium tuberculosis CDC1551] gi|167967617|ref|ZP_02549894.1| PROBABLE TRANSPOSASE [Mycobacterium tuberculosis H37Ra] gi|254551872|ref|ZP_05142319.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 27 more sequence titles Length=55 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 54/55 (99%), Positives = 55/55 (100%), Gaps = 0/55 (0%) Query 79 VLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 +LAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL Sbjct 1 MLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 55 >gi|340793271|ref|YP_004758734.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340533181|gb|AEK35661.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=204 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/77 (71%), Positives = 60/77 (78%), Gaps = 0/77 (0%) Query 57 GVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYR 116 G+P LEELA+LGRTLWR RHD+LAYFD ASNGP EAINGRLE L ALGFRNL HY Sbjct 128 GLPAGLEELAQLGRTLWRRRHDILAYFDVGASNGPVEAINGRLEHLRGIALGFRNLNHYI 187 Query 117 IRSLLHCGNLAQLIHAL 133 +RSL+H G L I+AL Sbjct 188 LRSLVHSGQLQDRINAL 204 >gi|340795655|ref|YP_004761118.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340535565|gb|AEK38045.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=437 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/77 (69%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 57 GVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYR 116 G+P LEELA+LGRTLWR R D+LAYFD ASNGP EAINGRLE L ALGFRNL HY Sbjct 361 GLPEGLEELAQLGRTLWRRRADILAYFDLGASNGPVEAINGRLEHLRGIALGFRNLDHYI 420 Query 117 IRSLLHCGNLAQLIHAL 133 +RSL+H G L I+AL Sbjct 421 LRSLVHSGQLQDRINAL 437 >gi|340795397|ref|YP_004760860.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340535307|gb|AEK37787.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=437 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/77 (69%), Positives = 59/77 (77%), Gaps = 0/77 (0%) Query 57 GVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYR 116 G+P LEELA+LGRTLWR R D+LAYFD ASNGP EAINGRLE L ALGFRNL HY Sbjct 361 GLPEGLEELAQLGRTLWRRRADILAYFDLGASNGPVEAINGRLEHLRGIALGFRNLNHYI 420 Query 117 IRSLLHCGNLAQLIHAL 133 +RSL+H G L I+AL Sbjct 421 LRSLVHSGQLQDRINAL 437 >gi|262200083|ref|YP_003271291.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262200740|ref|YP_003271948.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262204397|ref|YP_003275605.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262083430|gb|ACY19398.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262084087|gb|ACY20055.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] gi|262087744|gb|ACY23712.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia bronchialis DSM 43247] Length=436 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/107 (54%), Positives = 71/107 (67%), Gaps = 2/107 (1%) Query 27 NDLITEPPRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHH 86 DLI + +K+ ++ L + TGVP L ELA+LGR+LW R ++LAYFD Sbjct 332 QDLIDAYDQPHKRDGKIAMYKLLKRIH--TGVPKELAELAQLGRSLWARRTEILAYFDTG 389 Query 87 ASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 ASNGP EAINGRLE L ALGFRNL HY +RSL+H G LA+ +HAL Sbjct 390 ASNGPVEAINGRLEHLRGIALGFRNLNHYILRSLIHSGGLAEHLHAL 436 >gi|343926042|ref|ZP_08765555.1| putative transposase [Gordonia alkanivorans NBRC 16433] gi|343764046|dbj|GAA12481.1| putative transposase [Gordonia alkanivorans NBRC 16433] Length=436 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/78 (66%), Positives = 61/78 (79%), Gaps = 0/78 (0%) Query 56 TGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHY 115 TG+P L E+A+LGR+LW R ++LAYFD ASNGP EAINGRLE L ALGFRNLTHY Sbjct 359 TGLPTGLAEMAQLGRSLWARRAEILAYFDTGASNGPVEAINGRLEHLRGIALGFRNLTHY 418 Query 116 RIRSLLHCGNLAQLIHAL 133 +RSL+H G LA+ +HAL Sbjct 419 ILRSLIHSGQLAEHLHAL 436 >gi|326382392|ref|ZP_08204084.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199122|gb|EGD56304.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia neofelifaecis NRRL B-59395] Length=318 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/78 (67%), Positives = 59/78 (76%), Gaps = 0/78 (0%) Query 56 TGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHY 115 TGVP L ELA+LGR+LW R ++LAYFD ASNGP EAINGRLE L ALGFRNL HY Sbjct 241 TGVPSGLAELAQLGRSLWARRAEILAYFDTGASNGPVEAINGRLEHLRGIALGFRNLNHY 300 Query 116 RIRSLLHCGNLAQLIHAL 133 +RSL+H G LAQ + AL Sbjct 301 ILRSLIHSGGLAQHLDAL 318 >gi|256832661|ref|YP_003161388.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Jonesia denitrificans DSM 20603] gi|256686192|gb|ACV09085.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Jonesia denitrificans DSM 20603] Length=438 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/81 (66%), Positives = 59/81 (73%), Gaps = 0/81 (0%) Query 53 SAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNL 112 S G+P L ELA+LGRTLWR R D+LAYFD ASNGP EAINGRLE L ALGFRNL Sbjct 358 SIRKGLPEGLTELAQLGRTLWRRREDILAYFDVGASNGPVEAINGRLEHLRGIALGFRNL 417 Query 113 THYRIRSLLHCGNLAQLIHAL 133 HY +RSL+H G L I+AL Sbjct 418 DHYILRSLIHSGQLQARINAL 438 >gi|343925704|ref|ZP_08765220.1| putative transposase [Gordonia alkanivorans NBRC 16433] gi|343764384|dbj|GAA12146.1| putative transposase [Gordonia alkanivorans NBRC 16433] Length=435 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/78 (67%), Positives = 59/78 (76%), Gaps = 0/78 (0%) Query 56 TGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHY 115 TGVP L ELA+LGR+LW R ++LAYFD ASNGP EAINGRLE L ALGFRNL HY Sbjct 358 TGVPSGLAELAQLGRSLWARRAEILAYFDTGASNGPVEAINGRLEHLRGIALGFRNLNHY 417 Query 116 RIRSLLHCGNLAQLIHAL 133 +RSL+H G LAQ + AL Sbjct 418 ILRSLIHSGGLAQHLDAL 435 >gi|255325194|ref|ZP_05366300.1| transposase [Corynebacterium tuberculostearicum SK141] gi|255297759|gb|EET77070.1| transposase [Corynebacterium tuberculostearicum SK141] Length=437 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/77 (67%), Positives = 57/77 (75%), Gaps = 0/77 (0%) Query 57 GVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYR 116 G+P LEELA+LG TLWR R DVLAYFD ASNGP EAINGRLE L ALGF+NL HY Sbjct 361 GLPKGLEELAQLGCTLWRRRKDVLAYFDIGASNGPVEAINGRLEHLRGIALGFKNLNHYI 420 Query 117 IRSLLHCGNLAQLIHAL 133 +R L+H G L I+AL Sbjct 421 LRCLIHSGQLLDKINAL 437 >gi|77454838|ref|YP_345706.1| putative transposase [Rhodococcus erythropolis PR4] gi|77019838|dbj|BAE46214.1| putative transposase [Rhodococcus erythropolis PR4] Length=437 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/105 (53%), Positives = 69/105 (66%), Gaps = 2/105 (1%) Query 29 LITEPPRHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHAS 88 LIT K++ ++ L ++ TGVP L ELA+LGR+LW+ ++LAYFD AS Sbjct 335 LITAYEASGKREGKIAMYKLLRSIR--TGVPKELPELAQLGRSLWKRHREILAYFDIGAS 392 Query 89 NGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 NGP EAINGRLE L ALGFRNL HY +RSL+H G L I+AL Sbjct 393 NGPVEAINGRLEHLRGIALGFRNLKHYILRSLIHSGQLQNRINAL 437 >gi|319951125|ref|ZP_08024973.1| putative transposase [Dietzia cinnamea P4] gi|319435209|gb|EFV90481.1| putative transposase [Dietzia cinnamea P4] Length=418 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/96 (55%), Positives = 67/96 (70%), Gaps = 2/96 (2%) Query 38 KQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAING 97 K++ ++ L ++ AG VP L ELA+LGR+LW+ ++LAYFD +ASNGP EAING Sbjct 325 KREGKIAMYKLLRSIRAG--VPKELPELAQLGRSLWKRHREILAYFDVNASNGPVEAING 382 Query 98 RLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIHAL 133 RLE L ALGFRNL HY +RSL+H G L I+AL Sbjct 383 RLEHLRGIALGFRNLKHYILRSLIHSGQLQNRINAL 418 >gi|297627257|ref|YP_003689020.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923022|emb|CBL57605.1| Transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=435 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/95 (56%), Positives = 64/95 (68%), Gaps = 1/95 (1%) Query 38 KQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDHH-ASNGPTEAIN 96 K ++ ++A A L S G+ VP L E+ KLGRTL + R D+LA+FDH +SNGPTEAIN Sbjct 338 KARSDGKKALARLIDSIGSAVPTRLVEVCKLGRTLTKRRDDILAFFDHTGSSNGPTEAIN 397 Query 97 GRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 GRLE L ALGFRNLTHY RSLL G +H Sbjct 398 GRLEHLRGTALGFRNLTHYIARSLLEAGGFRPDLH 432 >gi|8517285|gb|AAC28267.2| transposase [Arthrobacter sp. TM1] Length=435 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRVRQAPALLTV--SAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y++Q R++ + V S TGVP L EL LGRTL R DVLAYFD SNGPTE Sbjct 335 YREQDRIQGKKLMQAVVNSISTGVPAALTELKTLGRTLKRRAEDVLAYFDRPGTSNGPTE 394 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 395 AINGRLEHLRGSALGFRNLTNYIARSLLESGGFRPKLH 432 >gi|340794326|ref|YP_004759789.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340534236|gb|AEK36716.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=139 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/77 (64%), Positives = 55/77 (72%), Gaps = 1/77 (1%) Query 57 GVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYR 116 G+P LEELA+LGRTLWR RHD+LAYFD ASNG GRLE L ALGFRNL HY Sbjct 64 GLPAGLEELAQLGRTLWRRRHDILAYFDLGASNGRG-GDQGRLEHLRGIALGFRNLDHYI 122 Query 117 IRSLLHCGNLAQLIHAL 133 +RSL+H G L I+AL Sbjct 123 LRSLIHSGQLRDRINAL 139 >gi|314927695|gb|EFS91526.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] Length=106 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 5 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 64 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 65 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 102 >gi|340794341|ref|YP_004759804.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340534251|gb|AEK36731.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=457 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/79 (61%), Positives = 56/79 (71%), Gaps = 1/79 (1%) Query 56 TGVPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEA-INGRLEALCRNALGFRNLTH 114 +G+P L ELA LGRTLWR R +LAYFD A+NGP EA +NGRLE L ALGFRNL H Sbjct 379 SGLPAGLGELATLGRTLWRKRSQILAYFDTGATNGPVEARLNGRLEHLRGIALGFRNLEH 438 Query 115 YRIRSLLHCGNLAQLIHAL 133 Y +RSL+H G L + AL Sbjct 439 YILRSLIHSGGLRGAVDAL 457 >gi|340794356|ref|YP_004759819.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340534266|gb|AEK36746.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=316 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 215 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 274 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 275 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 312 >gi|239918291|ref|YP_002957849.1| transposase family protein [Micrococcus luteus NCTC 2665] gi|281414084|ref|ZP_06245826.1| transposase family protein [Micrococcus luteus NCTC 2665] gi|281415514|ref|ZP_06247256.1| transposase family protein [Micrococcus luteus NCTC 2665] gi|239839498|gb|ACS31295.1| transposase family protein [Micrococcus luteus NCTC 2665] Length=346 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 245 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 304 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 305 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 342 >gi|281413817|ref|ZP_06245559.1| transposase family protein [Micrococcus luteus NCTC 2665] Length=292 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 191 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 250 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 251 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 288 >gi|297625497|ref|YP_003687260.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921262|emb|CBL55812.1| Transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=357 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/81 (59%), Positives = 57/81 (71%), Gaps = 1/81 (1%) Query 53 SAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEALCRNALGFRN 111 S GVP +L+E+ +LGRTL + D+LA+FD SNGPTEAINGRLE L +ALGFRN Sbjct 274 SVSNGVPALLKEIRRLGRTLKQRAADILAFFDRPGTSNGPTEAINGRLEHLRGSALGFRN 333 Query 112 LTHYRIRSLLHCGNLAQLIHA 132 LTHY RSLL G L+H+ Sbjct 334 LTHYVARSLLEAGGFRPLLHS 354 >gi|340794352|ref|YP_004759815.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340534262|gb|AEK36742.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=355 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 254 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 313 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 314 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 351 >gi|154507560|ref|ZP_02043202.1| hypothetical protein ACTODO_00039 [Actinomyces odontolyticus ATCC 17982] gi|153797194|gb|EDN79614.1| hypothetical protein ACTODO_00039 [Actinomyces odontolyticus ATCC 17982] Length=155 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/102 (50%), Positives = 61/102 (60%), Gaps = 4/102 (3%) Query 34 PRHYKQQTRVRQAP---ALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASN 89 P Y+ ++R A + + GVP L E+ LGRTL D+LAYFDH H SN Sbjct 51 PGAYRDPNKIRGKALMQAEIACLSDAGVPSSLTEIVTLGRTLKLRAGDILAYFDHPHTSN 110 Query 90 GPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 GPTEAINGRLE L +ALGFRNLTHY R+LL G +H Sbjct 111 GPTEAINGRLEHLRGSALGFRNLTHYITRALLETGGFRPQLH 152 >gi|308178789|ref|YP_003918195.1| transposase of ISAar42, ISL3 family [Arthrobacter arilaitensis Re117] gi|307746252|emb|CBT77224.1| transposase of ISAar42, ISL3 family [Arthrobacter arilaitensis Re117] Length=433 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/94 (53%), Positives = 60/94 (64%), Gaps = 1/94 (1%) Query 39 QQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAING 97 + + RQA + + TGVP L E+ KLGRT+ + D+LA+FD SNGPTEAING Sbjct 339 DKKKARQAMQAVIATITTGVPAALVEIRKLGRTMKQRAADILAFFDRPGTSNGPTEAING 398 Query 98 RLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 RLE L +ALGFRNLTHY RSLL G +H Sbjct 399 RLEHLRGSALGFRNLTHYIARSLLEAGGFRPHLH 432 >gi|297626832|ref|YP_003688595.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922597|emb|CBL57173.1| Transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=369 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/84 (61%), Positives = 56/84 (67%), Gaps = 1/84 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTEAINGRLE L Sbjct 265 RELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTEAINGRLEHL 324 Query 103 CRNALGFRNLTHYRIRSLLHCGNL 126 +ALGFRNLT+Y RSLL G Sbjct 325 RGSALGFRNLTNYIARSLLETGGF 348 >gi|297627459|ref|YP_003689222.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923224|emb|CBL57818.1| Transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=443 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 342 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 401 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 402 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 439 >gi|239917428|ref|YP_002956986.1| transposase [Micrococcus luteus NCTC 2665] gi|239917690|ref|YP_002957248.1| transposase [Micrococcus luteus NCTC 2665] gi|239838635|gb|ACS30432.1| transposase [Micrococcus luteus NCTC 2665] gi|239838897|gb|ACS30694.1| transposase [Micrococcus luteus NCTC 2665] Length=443 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 62/98 (64%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 342 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 401 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L +ALGFRNLT+Y RSLL G +H Sbjct 402 AINGRLEHLRGSALGFRNLTNYIARSLLETGGFRPRLH 439 >gi|340793781|ref|YP_004759244.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340793939|ref|YP_004759402.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340795830|ref|YP_004761293.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340533691|gb|AEK36171.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340533849|gb|AEK36329.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] gi|340535740|gb|AEK38220.1| transposase for insertion sequence element [Corynebacterium variabile DSM 44702] Length=249 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/76 (60%), Positives = 54/76 (72%), Gaps = 0/76 (0%) Query 58 VPVVLEELAKLGRTLWRCRHDVLAYFDHHASNGPTEAINGRLEALCRNALGFRNLTHYRI 117 +P L EL LG+TLWR R D+LAYFD ASNGP E ING+LE L ALGFRN +Y + Sbjct 174 IPNDLRELRVLGQTLWRRRADILAYFDTGASNGPVENINGKLEHLRGIALGFRNKANYIL 233 Query 118 RSLLHCGNLAQLIHAL 133 RSL+H G L + I+AL Sbjct 234 RSLIHSGGLREAINAL 249 >gi|260905941|ref|ZP_05914263.1| transposase family protein [Brevibacterium linens BL2] Length=205 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/111 (50%), Positives = 66/111 (60%), Gaps = 7/111 (6%) Query 24 SPTNDLITEPPRHYKQQTRVRQAPALLTV--SAGTGVPVVLEELAKLGRTLWRCRHDVLA 81 S D+IT Y+ R +L ++ S +GVP L EL +LGRTL + DVLA Sbjct 98 SVFQDIITA----YRNPDRTAGKKSLQSIIDSISSGVPAGLVELRRLGRTLKKRAMDVLA 153 Query 82 YFDH-HASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 YFD SNGPTEA+NGRLE L +ALGFRNLTHY RSLL G +H Sbjct 154 YFDRPGTSNGPTEALNGRLEHLRGSALGFRNLTHYIARSLLETGGFRPRLH 204 >gi|297625512|ref|YP_003687275.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921277|emb|CBL55829.1| Transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=357 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 54/98 (56%), Positives = 61/98 (63%), Gaps = 3/98 (3%) Query 37 YKQQTRV--RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 Y+ + R R+ A L S TGVP L E+ KLGRTL + DVLAYFD SNGPTE Sbjct 256 YRHENRRHGRELMARLIDSISTGVPKALVEITKLGRTLKKRAADVLAYFDRPSTSNGPTE 315 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L ALGFRNLT+Y RSLL G +H Sbjct 316 AINGRLEHLRGIALGFRNLTNYIARSLLETGGFRPRLH 353 >gi|308177159|ref|YP_003916565.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] gi|307744622|emb|CBT75594.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] Length=435 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/90 (57%), Positives = 58/90 (65%), Gaps = 1/90 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 R A L GT VP L EL KLG TL R + D+LAYFDH +SNGPTEA+NGRLE L Sbjct 344 RWALEQLINGVGTKVPKGLPELKKLGGTLRRRKTDILAYFDHVGSSNGPTEALNGRLEHL 403 Query 103 CRNALGFRNLTHYRIRSLLHCGNLAQLIHA 132 ALGF+NLTHY RSLL G +H+ Sbjct 404 RGIALGFKNLTHYIARSLLETGGFRPWLHS 433 >gi|306818350|ref|ZP_07452076.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|304648859|gb|EFM46158.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length=149 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/98 (53%), Positives = 61/98 (63%), Gaps = 7/98 (7%) Query 35 RHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 +H QQ + A ++AG L EL +LGRTL R D+LAYFDH H+SNGPTE Sbjct 55 KHLMQQVIEKLANIPKDIAAG------LPELRRLGRTLKRRTGDILAYFDHPHSSNGPTE 108 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AINGRLE L ALGFRN +YRIR+LL G +H Sbjct 109 AINGRLEHLRGTALGFRNFINYRIRALLETGGFKNQLH 146 >gi|260904527|ref|ZP_05912849.1| transposase family protein [Brevibacterium linens BL2] Length=227 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/111 (50%), Positives = 66/111 (60%), Gaps = 7/111 (6%) Query 24 SPTNDLITEPPRHYKQQTRVRQAPALLTV--SAGTGVPVVLEELAKLGRTLWRCRHDVLA 81 S D+IT Y+ R +L ++ S +GVP L EL +LGRTL + DVLA Sbjct 120 SVFQDIITA----YRNPDRTAGKKSLQSIIDSISSGVPAGLVELRRLGRTLKKRAMDVLA 175 Query 82 YFDH-HASNGPTEAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 YFD SNGPTEA+NGRLE L +ALGFRNLTHY RSLL G +H Sbjct 176 YFDRPGTSNGPTEALNGRLEHLRGSALGFRNLTHYIARSLLETGGFRPRLH 226 >gi|256825340|ref|YP_003149300.1| transposase family protein [Kytococcus sedentarius DSM 20547] gi|256688733|gb|ACV06535.1| transposase family protein [Kytococcus sedentarius DSM 20547] Length=451 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/89 (58%), Positives = 57/89 (65%), Gaps = 1/89 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 RQA + L S +GVP L EL LGRTL + DVLAYFD SNGPTEA NGRLE L Sbjct 359 RQAMSNLITSLTSGVPAALTELVTLGRTLSKRAEDVLAYFDRPGTSNGPTEATNGRLEHL 418 Query 103 CRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 +ALGFRNLT+Y RSLL G +H Sbjct 419 RGSALGFRNLTNYIARSLLETGGFRPQLH 447 >gi|256826066|ref|YP_003150026.1| transposase family protein [Kytococcus sedentarius DSM 20547] gi|256689459|gb|ACV07261.1| transposase family protein [Kytococcus sedentarius DSM 20547] Length=438 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/89 (58%), Positives = 57/89 (65%), Gaps = 1/89 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 RQA + L S +GVP L EL LGRTL + DVLAYFD SNGPTEA NGRLE L Sbjct 346 RQAMSNLITSLTSGVPAALTELVTLGRTLSKRAEDVLAYFDRPGTSNGPTEATNGRLEHL 405 Query 103 CRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 +ALGFRNLT+Y RSLL G +H Sbjct 406 RGSALGFRNLTNYIARSLLETGGFRPQLH 434 >gi|256824563|ref|YP_003148523.1| transposase family protein [Kytococcus sedentarius DSM 20547] gi|256687956|gb|ACV05758.1| transposase family protein [Kytococcus sedentarius DSM 20547] Length=438 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/92 (57%), Positives = 58/92 (64%), Gaps = 4/92 (4%) Query 44 RQAPALLTV---SAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRL 99 R+ AL+T S GVP L EL LGRTL + DVLA+FD SNGPTEAINGRL Sbjct 343 REGRALMTAVIDSVTRGVPTALSELVTLGRTLTKRAEDVLAFFDLPGTSNGPTEAINGRL 402 Query 100 EALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 E L +ALGFRNLTHY RSLL G +H Sbjct 403 EHLRGSALGFRNLTHYVARSLLEAGGFRPRLH 434 >gi|226860316|gb|ACO88870.1| transposase [Microbacterium sp. MA1] gi|226860326|gb|ACO88880.1| transposase [Microbacterium sp. MA1] Length=443 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/94 (56%), Positives = 59/94 (63%), Gaps = 1/94 (1%) Query 39 QQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAING 97 + R R+ L S TGVP L E+ LGRTL + DVLAYFD SNGPTEAING Sbjct 347 DRRRGRELMTKLIDSISTGVPKALVEVITLGRTLTKRAEDVLAYFDRPGTSNGPTEAING 406 Query 98 RLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 RLE L +ALGFRNLT+Y RSLL G L+H Sbjct 407 RLEHLRGSALGFRNLTNYIARSLLETGGFRPLLH 440 >gi|256826127|ref|YP_003150087.1| transposase family protein [Kytococcus sedentarius DSM 20547] gi|256689520|gb|ACV07322.1| transposase family protein [Kytococcus sedentarius DSM 20547] Length=438 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/92 (57%), Positives = 58/92 (64%), Gaps = 4/92 (4%) Query 44 RQAPALLTV---SAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRL 99 R+ AL+T S GVP L EL LGRTL + DVLA+FD SNGPTEAINGRL Sbjct 343 REGRALMTAVIDSVTRGVPTALSELVTLGRTLTKRAEDVLAFFDLPGTSNGPTEAINGRL 402 Query 100 EALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 E L +ALGFRNLTHY RSLL G +H Sbjct 403 EHLRGSALGFRNLTHYVARSLLEAGGFRPRLH 434 >gi|315606220|ref|ZP_07881245.1| transposase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312072|gb|EFU60164.1| transposase [Actinomyces sp. oral taxon 180 str. F0310] Length=436 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/99 (53%), Positives = 60/99 (61%), Gaps = 4/99 (4%) Query 37 YKQQTRVRQAP---ALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPT 92 Y+ ++R A + T VP L EL LGRTL R D+LAYFDH H SNGPT Sbjct 335 YRDPNKIRGKALMQAEINTLTSTRVPRGLTELITLGRTLKRRAGDILAYFDHPHTSNGPT 394 Query 93 EAINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 EAINGRLE L +ALGFRNLTHY R+LL G +H Sbjct 395 EAINGRLEHLRGSALGFRNLTHYITRALLETGGFKPQLH 433 >gi|297627420|ref|YP_003689183.1| transposase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923185|emb|CBL57778.1| Transposase (fragment C term) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=317 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/83 (61%), Positives = 54/83 (66%), Gaps = 1/83 (1%) Query 50 LTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEALCRNALG 108 L S +GVP L EL LGRTL + DVLAYFD SNGPTEAINGRLE L +ALG Sbjct 232 LIASLASGVPAALVELRTLGRTLKQRAVDVLAYFDRPGTSNGPTEAINGRLEHLRGSALG 291 Query 109 FRNLTHYRIRSLLHCGNLAQLIH 131 FRNLTHY RSLL G +H Sbjct 292 FRNLTHYVARSLLETGGFRPQLH 314 >gi|308176597|ref|YP_003916003.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] gi|307744060|emb|CBT75032.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] Length=435 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/90 (56%), Positives = 58/90 (65%), Gaps = 1/90 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 R A L G+ VP L EL KLG TL R + D+LAYFDH +SNGPTEA+NGRLE L Sbjct 344 RWALEQLINGVGSKVPKGLPELKKLGGTLRRRKTDILAYFDHVGSSNGPTEALNGRLEHL 403 Query 103 CRNALGFRNLTHYRIRSLLHCGNLAQLIHA 132 ALGF+NLTHY RSLL G +H+ Sbjct 404 RGIALGFKNLTHYIARSLLETGGFRPWLHS 433 >gi|150005|gb|AAA98489.1| ORF2 [Mycobacterium smegmatis] gi|82393547|gb|AAT01803.2| TnpA [Mycobacterium smegmatis str. MC2 155] Length=413 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/89 (58%), Positives = 57/89 (65%), Gaps = 1/89 (1%) Query 39 QQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAING 97 +T+ R A L + TGVP L EL LGRTL + DVLAYFD SNGPTEAING Sbjct 316 DRTKGRTMMAALITTLSTGVPTSLTELITLGRTLKKRAADVLAYFDRPGTSNGPTEAING 375 Query 98 RLEALCRNALGFRNLTHYRIRSLLHCGNL 126 RLE L +ALGFRNLT+Y RSLL G Sbjct 376 RLEHLRGSALGFRNLTNYIARSLLETGGF 404 >gi|118467651|ref|YP_887999.1| IS1096, tnpA protein [Mycobacterium smegmatis str. MC2 155] gi|118467658|ref|YP_890381.1| IS1096, tnpA protein [Mycobacterium smegmatis str. MC2 155] gi|118468079|ref|YP_889344.1| IS1096, tnpA protein [Mycobacterium smegmatis str. MC2 155] 45 more sequence titles Length=440 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/89 (58%), Positives = 57/89 (65%), Gaps = 1/89 (1%) Query 39 QQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAING 97 +T+ R A L + TGVP L EL LGRTL + DVLAYFD SNGPTEAING Sbjct 343 DRTKGRTMMAALITTLSTGVPTSLTELITLGRTLKKRAADVLAYFDRPGTSNGPTEAING 402 Query 98 RLEALCRNALGFRNLTHYRIRSLLHCGNL 126 RLE L +ALGFRNLT+Y RSLL G Sbjct 403 RLEHLRGSALGFRNLTNYIARSLLETGGF 431 >gi|308178189|ref|YP_003917595.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] gi|308179028|ref|YP_003918434.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] gi|307745652|emb|CBT76624.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] gi|307746491|emb|CBT77463.1| transposase of ISAar20, ISL3 family [Arthrobacter arilaitensis Re117] Length=435 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/90 (56%), Positives = 58/90 (65%), Gaps = 1/90 (1%) Query 44 RQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTEAINGRLEAL 102 R A L G+ VP L EL KLG TL R + D+LAYFDH +SNGPTEA+NGRLE L Sbjct 344 RWALEQLINGVGSKVPKGLPELKKLGGTLRRRKTDILAYFDHVGSSNGPTEALNGRLEHL 403 Query 103 CRNALGFRNLTHYRIRSLLHCGNLAQLIHA 132 ALGF+NLTHY RSLL G +H+ Sbjct 404 RGIALGFKNLTHYIARSLLETGGFRPWLHS 433 >gi|306818387|ref|ZP_07452113.1| transposase [Mobiluncus mulieris ATCC 35239] gi|304648896|gb|EFM46195.1| transposase [Mobiluncus mulieris ATCC 35239] Length=164 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/98 (53%), Positives = 61/98 (63%), Gaps = 7/98 (7%) Query 35 RHYKQQTRVRQAPALLTVSAGTGVPVVLEELAKLGRTLWRCRHDVLAYFDH-HASNGPTE 93 +H QQ + A ++AG L EL +LGRTL R D+LAYFDH H+SNGPTE Sbjct 66 KHLMQQVIDKLANIPKDIAAG------LPELRRLGRTLKRRAADILAYFDHPHSSNGPTE 119 Query 94 AINGRLEALCRNALGFRNLTHYRIRSLLHCGNLAQLIH 131 AIN RLE L LGFRNL HYRIR+LL G + +H Sbjct 120 AINVRLEHLRGTILGFRNLIHYRIRALLETGGFKKQLH 157 Lambda K H 0.321 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130457467840 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40