BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2827c

Length=295
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167968179|ref|ZP_02550456.1|  hypothetical protein MtubH3_0915...   576    2e-162
gi|15842368|ref|NP_337405.1|  hypothetical protein MT2894 [Mycoba...   576    2e-162
gi|99031682|pdb|1ZEL|A  Chain A, Crystal Structure Of Rv2827c Pro...   575    2e-162
gi|15609964|ref|NP_217343.1|  hypothetical protein Rv2827c [Mycob...   574    5e-162
gi|339299284|gb|AEJ51394.1|  hypothetical protein CCDC5180_2557 [...   573    1e-161
gi|298526296|ref|ZP_07013705.1|  hypothetical protein TBAG_01713 ...   573    1e-161
gi|308232256|ref|ZP_07415445.2|  hypothetical protein TMAG_01023 ...   543    1e-152
gi|340626054|ref|YP_004744506.1|  hypothetical protein MCAN_10491...   536    2e-150
gi|254232921|ref|ZP_04926248.1|  hypothetical protein TBCG_02763 ...   428    4e-118
gi|295106027|emb|CBL03570.1|  Protein of unknown function (DUF200...   100    2e-19 
gi|269957664|ref|YP_003327453.1|  hypothetical protein Xcel_2882 ...  69.3    7e-10 
gi|345125945|gb|EGW55812.1|  phosphoribosylformylglycinamidine sy...  38.1    1.8   
gi|344225316|gb|EGV51678.1|  phosphoribosylformylglycinamidine sy...  38.1    1.8   
gi|343917462|gb|EGV28262.1|  Phosphoribosylformylglycinamidine sy...  37.4    2.9   
gi|323699869|ref|ZP_08111781.1|  AAA ATPase central domain protei...  36.2    6.8   


>gi|167968179|ref|ZP_02550456.1| hypothetical protein MtubH3_09154 [Mycobacterium tuberculosis 
H37Ra]
 gi|253798088|ref|YP_003031089.1| hypothetical protein TBMG_01146 [Mycobacterium tuberculosis KZN 
1435]
 gi|289553385|ref|ZP_06442595.1| hypothetical protein TBXG_01135 [Mycobacterium tuberculosis KZN 
605]
 8 more sequence titles
 gi|289746626|ref|ZP_06506004.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308405983|ref|ZP_07494641.2| hypothetical protein TMLG_01310 [Mycobacterium tuberculosis SUMu012]
 gi|253319591|gb|ACT24194.1| hypothetical protein TBMG_01146 [Mycobacterium tuberculosis KZN 
1435]
 gi|289438017|gb|EFD20510.1| hypothetical protein TBXG_01135 [Mycobacterium tuberculosis KZN 
605]
 gi|289687154|gb|EFD54642.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308364936|gb|EFP53787.1| hypothetical protein TMLG_01310 [Mycobacterium tuberculosis SUMu012]
 gi|328457861|gb|AEB03284.1| hypothetical protein TBSG_01155 [Mycobacterium tuberculosis KZN 
4207]
 gi|339295668|gb|AEJ47779.1| hypothetical protein CCDC5079_2589 [Mycobacterium tuberculosis 
CCDC5079]
Length=300

 Score =  576 bits (1484),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  6    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  65

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  66   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  125

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  126  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  185

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240
            EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
Sbjct  186  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  245

Query  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  246  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  300


>gi|15842368|ref|NP_337405.1| hypothetical protein MT2894 [Mycobacterium tuberculosis CDC1551]
 gi|13882666|gb|AAK47219.1| hypothetical protein MT2894 [Mycobacterium tuberculosis CDC1551]
Length=315

 Score =  576 bits (1484),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 294/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  21   VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  80

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  81   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  140

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  141  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  200

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240
            EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
Sbjct  201  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  260

Query  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPL RVIGKA
Sbjct  261  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLXRVIGKA  315


>gi|99031682|pdb|1ZEL|A Chain A, Crystal Structure Of Rv2827c Protein From Mycobacterium 
Tuberculosis
 gi|99031683|pdb|1ZEL|B Chain B, Crystal Structure Of Rv2827c Protein From Mycobacterium 
Tuberculosis
Length=298

 Score =  575 bits (1483),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  4    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  63

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  64   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  123

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  124  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  183

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240
            EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
Sbjct  184  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  243

Query  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  244  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  298


>gi|15609964|ref|NP_217343.1| hypothetical protein Rv2827c [Mycobacterium tuberculosis H37Rv]
 gi|31794003|ref|NP_856496.1| hypothetical protein Mb2851c [Mycobacterium bovis AF2122/97]
 gi|121638706|ref|YP_978930.1| hypothetical protein BCG_2846c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 37 more sequence titles
 gi|148662669|ref|YP_001284192.1| hypothetical protein MRA_2851 [Mycobacterium tuberculosis H37Ra]
 gi|148824016|ref|YP_001288770.1| hypothetical protein TBFG_12841 [Mycobacterium tuberculosis F11]
 gi|224991198|ref|YP_002645887.1| hypothetical protein JTY_2840 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254365475|ref|ZP_04981520.1| hypothetical protein TBHG_02758 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254551889|ref|ZP_05142336.1| hypothetical protein Mtube_15757 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289444376|ref|ZP_06434120.1| hypothetical protein TBLG_01478 [Mycobacterium tuberculosis T46]
 gi|289448488|ref|ZP_06438232.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289571014|ref|ZP_06451241.1| hypothetical protein TBJG_02433 [Mycobacterium tuberculosis T17]
 gi|289575527|ref|ZP_06455754.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289751487|ref|ZP_06510865.1| hypothetical protein TBDG_02585 [Mycobacterium tuberculosis T92]
 gi|289754933|ref|ZP_06514311.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758945|ref|ZP_06518323.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763002|ref|ZP_06522380.1| hypothetical protein TBIG_02185 [Mycobacterium tuberculosis GM 
1503]
 gi|294994083|ref|ZP_06799774.1| hypothetical protein Mtub2_06113 [Mycobacterium tuberculosis 
210]
 gi|297635439|ref|ZP_06953219.1| hypothetical protein MtubK4_15017 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732437|ref|ZP_06961555.1| hypothetical protein MtubKR_15172 [Mycobacterium tuberculosis 
KZN R506]
 gi|313659769|ref|ZP_07816649.1| hypothetical protein MtubKV_15172 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632836|ref|YP_004724478.1| hypothetical protein MAF_28320 [Mycobacterium africanum GM041182]
 gi|1648893|emb|CAB03659.1| HYPOTHETICAL PROTEIN Rv2827c [Mycobacterium tuberculosis H37Rv]
 gi|31619597|emb|CAD95036.1| HYPOTHETICAL PROTEIN Mb2851c [Mycobacterium bovis AF2122/97]
 gi|121494354|emb|CAL72834.1| Hypothetical protein BCG_2846c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134150988|gb|EBA43033.1| hypothetical protein TBHG_02758 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506821|gb|ABQ74630.1| hypothetical protein MRA_2851 [Mycobacterium tuberculosis H37Ra]
 gi|148722543|gb|ABR07168.1| hypothetical protein TBFG_12841 [Mycobacterium tuberculosis F11]
 gi|224774313|dbj|BAH27119.1| hypothetical protein JTY_2840 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289417295|gb|EFD14535.1| hypothetical protein TBLG_01478 [Mycobacterium tuberculosis T46]
 gi|289421446|gb|EFD18647.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289539958|gb|EFD44536.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544768|gb|EFD48416.1| hypothetical protein TBJG_02433 [Mycobacterium tuberculosis T17]
 gi|289692074|gb|EFD59503.1| hypothetical protein TBDG_02585 [Mycobacterium tuberculosis T92]
 gi|289695520|gb|EFD62949.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710508|gb|EFD74524.1| hypothetical protein TBIG_02185 [Mycobacterium tuberculosis GM 
1503]
 gi|289714509|gb|EFD78521.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326904441|gb|EGE51374.1| hypothetical protein TBPG_02345 [Mycobacterium tuberculosis W-148]
 gi|339332192|emb|CCC27902.1| hypothetical protein MAF_28320 [Mycobacterium africanum GM041182]
 gi|341602744|emb|CCC65422.1| hypothetical protein BCGM_2829c [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220659|gb|AEN01290.1| hypothetical protein MTCTRI2_2884 [Mycobacterium tuberculosis 
CTRI-2]
Length=295

 Score =  574 bits (1480),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 294/295 (99%), Positives = 295/295 (100%), Gaps = 0/295 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            +VSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  1    MVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240
            EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
Sbjct  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240

Query  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295


>gi|339299284|gb|AEJ51394.1| hypothetical protein CCDC5180_2557 [Mycobacterium tuberculosis 
CCDC5180]
Length=294

 Score =  573 bits (1477),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 293/294 (99%), Positives = 294/294 (100%), Gaps = 0/294 (0%)

Query  2    VSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWL  61
            +SPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWL
Sbjct  1    MSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWL  60

Query  62   VQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRI  121
            VQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRI
Sbjct  61   VQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRI  120

Query  122  PIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPE  181
            PIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPE
Sbjct  121  PIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPE  180

Query  182  ALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEP  241
            ALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEP
Sbjct  181  ALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEP  240

Query  242  ARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            ARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  241  ARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  294


>gi|298526296|ref|ZP_07013705.1| hypothetical protein TBAG_01713 [Mycobacterium tuberculosis 94_M4241A]
 gi|298496090|gb|EFI31384.1| hypothetical protein TBAG_01713 [Mycobacterium tuberculosis 94_M4241A]
Length=295

 Score =  573 bits (1476),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 293/295 (99%), Positives = 294/295 (99%), Gaps = 0/295 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            +VSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  1    MVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240
            EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE
Sbjct  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGE  240

Query  241  PARGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            PARGQALL KRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  241  PARGQALLGKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295


>gi|308232256|ref|ZP_07415445.2| hypothetical protein TMAG_01023 [Mycobacterium tuberculosis SUMu001]
 gi|308369872|ref|ZP_07419352.2| hypothetical protein TMBG_02965 [Mycobacterium tuberculosis SUMu002]
 gi|308371147|ref|ZP_07667100.1| hypothetical protein TMCG_02072 [Mycobacterium tuberculosis SUMu003]
 20 more sequence titles
 gi|308372264|ref|ZP_07667342.1| hypothetical protein TMDG_00012 [Mycobacterium tuberculosis SUMu004]
 gi|308373517|ref|ZP_07432627.2| hypothetical protein TMEG_03967 [Mycobacterium tuberculosis SUMu005]
 gi|308374708|ref|ZP_07437051.2| hypothetical protein TMFG_00018 [Mycobacterium tuberculosis SUMu006]
 gi|308375472|ref|ZP_07444039.2| hypothetical protein TMGG_02044 [Mycobacterium tuberculosis SUMu007]
 gi|308377142|ref|ZP_07668444.1| hypothetical protein TMHG_02027 [Mycobacterium tuberculosis SUMu008]
 gi|308378112|ref|ZP_07481549.2| hypothetical protein TMIG_02324 [Mycobacterium tuberculosis SUMu009]
 gi|308379331|ref|ZP_07668950.1| hypothetical protein TMJG_01812 [Mycobacterium tuberculosis SUMu010]
 gi|308380484|ref|ZP_07490103.2| hypothetical protein TMKG_03256 [Mycobacterium tuberculosis SUMu011]
 gi|308214522|gb|EFO73921.1| hypothetical protein TMAG_01023 [Mycobacterium tuberculosis SUMu001]
 gi|308326167|gb|EFP15018.1| hypothetical protein TMBG_02965 [Mycobacterium tuberculosis SUMu002]
 gi|308329697|gb|EFP18548.1| hypothetical protein TMCG_02072 [Mycobacterium tuberculosis SUMu003]
 gi|308333836|gb|EFP22687.1| hypothetical protein TMDG_00012 [Mycobacterium tuberculosis SUMu004]
 gi|308337351|gb|EFP26202.1| hypothetical protein TMEG_03967 [Mycobacterium tuberculosis SUMu005]
 gi|308341004|gb|EFP29855.1| hypothetical protein TMFG_00018 [Mycobacterium tuberculosis SUMu006]
 gi|308346209|gb|EFP35060.1| hypothetical protein TMGG_02044 [Mycobacterium tuberculosis SUMu007]
 gi|308348820|gb|EFP37671.1| hypothetical protein TMHG_02027 [Mycobacterium tuberculosis SUMu008]
 gi|308353546|gb|EFP42397.1| hypothetical protein TMIG_02324 [Mycobacterium tuberculosis SUMu009]
 gi|308357387|gb|EFP46238.1| hypothetical protein TMJG_01812 [Mycobacterium tuberculosis SUMu010]
 gi|308361339|gb|EFP50190.1| hypothetical protein TMKG_03256 [Mycobacterium tuberculosis SUMu011]
 gi|323718570|gb|EGB27738.1| hypothetical protein TMMG_03695 [Mycobacterium tuberculosis CDC1551A]
Length=278

 Score =  543 bits (1399),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 277/278 (99%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  18   VVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGE  77
            +VSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGE
Sbjct  1    MVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGE  60

Query  78   AAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLAS  137
            AAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLAS
Sbjct  61   AAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLPPAKRLPDGLAS  120

Query  138  YVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPW  197
            YVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPW
Sbjct  121  YVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPW  180

Query  198  ADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMP  257
            ADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMP
Sbjct  181  ADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMP  240

Query  258  VTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            VTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA
Sbjct  241  VTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  278


>gi|340626054|ref|YP_004744506.1| hypothetical protein MCAN_10491 [Mycobacterium canettii CIPT 
140010059]
 gi|340004244|emb|CCC43385.1| hypothetical protein MCAN_10491 [Mycobacterium canettii CIPT 
140010059]
Length=295

 Score =  536 bits (1380),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 272/293 (93%), Positives = 278/293 (95%), Gaps = 0/293 (0%)

Query  3    SPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLV  62
            SPAGADRRIPTWASRVVSGLARDRP VVTK+DLT RL EAGC RDPDSAIRELRRIGWLV
Sbjct  3    SPAGADRRIPTWASRVVSGLARDRPTVVTKQDLTLRLAEAGCERDPDSAIRELRRIGWLV  62

Query  63   QLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIP  122
            QLPVKGTWAFIPPGE A+SDPYL LRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIP
Sbjct  63   QLPVKGTWAFIPPGEDAVSDPYLTLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGRIP  122

Query  123  IWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEA  182
            IWLPP KRLPDGLA YVSVVRIPWNAADTALLAPRPALLVRRRLD+VAWATGLPA GPEA
Sbjct  123  IWLPPVKRLPDGLAPYVSVVRIPWNAADTALLAPRPALLVRRRLDIVAWATGLPAFGPEA  182

Query  183  LLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDSGGEPA  242
            LLVQIATRPASFGPWADLV HLD+L+ADCSDERLERLLSGRPTSAWQRASYLLD+ GEPA
Sbjct  183  LLVQIATRPASFGPWADLVAHLDELIADCSDERLERLLSGRPTSAWQRASYLLDAAGEPA  242

Query  243  RGQALLAKRHTEVMPVTRFTTAHSRDRGESVWAPEYQLVDELVVPLLRVIGKA  295
            RGQALLAKR TE MPV RFTTAHSRDRGESVWAPEYQLVDELV PLLRVIGKA
Sbjct  243  RGQALLAKRQTEAMPVARFTTAHSRDRGESVWAPEYQLVDELVAPLLRVIGKA  295


>gi|254232921|ref|ZP_04926248.1| hypothetical protein TBCG_02763 [Mycobacterium tuberculosis C]
 gi|124601980|gb|EAY60990.1| hypothetical protein TBCG_02763 [Mycobacterium tuberculosis C]
Length=237

 Score =  428 bits (1101),  Expect = 4e-118, Method: Compositional matrix adjust.
 Identities = 220/223 (99%), Positives = 222/223 (99%), Gaps = 0/223 (0%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            +VSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW
Sbjct  1    MVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60

Query  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120
            LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR
Sbjct  61   LVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQPDGR  120

Query  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180
            IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP
Sbjct  121  IPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGP  180

Query  181  EALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGR  223
            EALLVQIATRPASF PWADLVPHLDD+VADCSDERLERLLSGR
Sbjct  181  EALLVQIATRPASFEPWADLVPHLDDVVADCSDERLERLLSGR  223


>gi|295106027|emb|CBL03570.1| Protein of unknown function (DUF2005). [Gordonibacter pamelaeae 
7-10-1-b]
Length=276

 Score =  100 bits (250),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 80/285 (29%), Positives = 119/285 (42%), Gaps = 44/285 (15%)

Query  1    VVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGW  60
            V+      R IP W S VV  L  DRP +VT  +LT    ++G      +    LR++GW
Sbjct  7    VIKVITMTRYIPQWLSPVVEALELDRPELVTMAELTSIAEQSGVEAQGYAIADRLRKLGW  66

Query  61   LVQLPVKGTWAFIPP---GEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQP  117
            L++ P +G W F P    G  + +DP LP+++++         L   +AAW LG  DR P
Sbjct  67   LLETPQRGVWEFAPAESAGPYSTADPLLPMKAFMLSHPGCKCALTMQTAAWALGLADRVP  126

Query  118  DGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAW------  171
                                          A        RPA+ V R +    +      
Sbjct  127  ------------------------------ACIEVSFEKRPAVKVPREISPSVFESTIGS  156

Query  172  --ATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQ  229
              A G+P L PE+++V +A +P++   W   +  L D+  +  +E L   L+GRP S W 
Sbjct  157  VEAKGVPCLHPESIVVHMAQKPSAVRSWQGALEWLPDVAYEMREEPLLDELAGRPQSVWS  216

Query  230  RASYLLDSGGEPARGQALLAKRHTEVMPVTRFTTAHSRDRGESVW  274
            R  YL+ SG  P   + +   R  E     RF    S  R +  W
Sbjct  217  RTGYLV-SGMRPDLAEGI--SRGIETGSKVRFGPRGSAIRNDERW  258


>gi|269957664|ref|YP_003327453.1| hypothetical protein Xcel_2882 [Xylanimonas cellulosilytica DSM 
15894]
 gi|269306345|gb|ACZ31895.1| hypothetical protein Xcel_2882 [Xylanimonas cellulosilytica DSM 
15894]
Length=270

 Score = 69.3 bits (168),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 65/202 (33%), Positives = 85/202 (43%), Gaps = 32/202 (15%)

Query  16   SRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPP  75
             +VV  L  D+PVVVT  D+       G         R LR  GWL+    +G + F P 
Sbjct  12   GQVVEELELDQPVVVTIADVADIAARRGIKTPASELARRLRLSGWLLPTGQRGVYEFAPG  71

Query  76   GEA---AISDPYLPLRSWL------ARDQNAGFMLAGASAAWHLGYLDRQPDGRIPIWLP  126
              A      DP + LR++L      ARD  AG +   ++A W  G  DR P+ R  + +P
Sbjct  72   AHAGPHGHGDPLVTLRAFLASRGHAARDDVAGCL---STAIWLHGLSDRAPN-RHEVAVP  127

Query  127  PAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQ  186
            P   +P GLA    VVR           A RPA              G+P  GP  +LV 
Sbjct  128  PRAHVPAGLAREFRVVRFAS--------AVRPAD-----------HDGVPVHGPATILVH  168

Query  187  IATRPASFGPWADLVPHLDDLV  208
            +A RP     W  +   L DLV
Sbjct  169  LAARPTDVRSWGSVEEALPDLV  190


>gi|345125945|gb|EGW55812.1| phosphoribosylformylglycinamidine synthase [endosymbiont of Tevnia 
jerichonana (vent Tica)]
Length=1295

 Score = 38.1 bits (87),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 30/94 (32%), Positives = 43/94 (46%), Gaps = 15/94 (15%)

Query  168  LVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSA  227
            L+ +   L    PE  L+ +  RP +  PW+       D+V  C  +++ERL  G     
Sbjct  57   LLRYGPQLSEHDPEGSLLLVVPRPGTISPWSTKAT---DIVHHCGLQKIERLERG-----  108

Query  228  WQRASYLLDSGGEPARGQ-----ALLAKRHTEVM  256
               A YL   GGE + G+     ALL  R TEV+
Sbjct  109  --MAYYLQLEGGELSNGENRVLAALLHDRMTEVV  140


>gi|344225316|gb|EGV51678.1| phosphoribosylformylglycinamidine synthase [endosymbiont of Riftia 
pachyptila (vent Ph05)]
Length=1302

 Score = 38.1 bits (87),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 30/94 (32%), Positives = 43/94 (46%), Gaps = 15/94 (15%)

Query  168  LVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSA  227
            L+ +   L    PE  L+ +  RP +  PW+       D+V  C  +++ERL  G     
Sbjct  64   LLRYGPQLSEHDPEGSLLLVVPRPGTISPWSTKAT---DIVHHCGLQKIERLERG-----  115

Query  228  WQRASYLLDSGGEPARGQ-----ALLAKRHTEVM  256
               A YL   GGE + G+     ALL  R TEV+
Sbjct  116  --MAYYLQLEGGELSNGENRVLAALLHDRMTEVV  147


>gi|343917462|gb|EGV28262.1| Phosphoribosylformylglycinamidine synthase [Thiorhodococcus drewsii 
AZ1]
Length=1309

 Score = 37.4 bits (85),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 29/93 (32%), Positives = 42/93 (46%), Gaps = 15/93 (16%)

Query  168  LVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSA  227
            L+ +   LPA  PE  LV I  RP +  PW+       D+  +C   +++RL  G     
Sbjct  69   LLRYGPSLPAHAPEGALVLIVPRPGTISPWSSKAT---DIAHNCGLTQIQRLERG-----  120

Query  228  WQRASYLLDSGGEPA-----RGQALLAKRHTEV  255
               A YL+   GE A     +  A+L  R T+V
Sbjct  121  --TAYYLVSETGEIAEDVLLQAAAILHDRMTQV  151


>gi|323699869|ref|ZP_08111781.1| AAA ATPase central domain protein [Desulfovibrio sp. ND132]
 gi|323459801|gb|EGB15666.1| AAA ATPase central domain protein [Desulfovibrio desulfuricans 
ND132]
Length=732

 Score = 36.2 bits (82),  Expect = 6.8, Method: Compositional matrix adjust.
 Identities = 19/43 (45%), Positives = 24/43 (56%), Gaps = 0/43 (0%)

Query  16   SRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRI  58
            SR + GL R+ PV     DL+ R   A CGRD    +R LRR+
Sbjct  424  SREIRGLVREYPVSAGVVDLSVRQARAMCGRDAGRFVRTLRRL  466



Lambda     K      H
   0.321    0.137    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 489554810128


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40