BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2833c Length=436 Score E Sequences producing significant alignments: (Bits) Value gi|15609970|ref|NP_217349.1| sn-glycerol-3-phosphate-binding lip... 886 0.0 gi|298526302|ref|ZP_07013711.1| sn-glycerol-3-phosphate-binding ... 885 0.0 gi|339632842|ref|YP_004724484.1| Sn-glycerol-3-phosphate-binding... 885 0.0 gi|31794009|ref|NP_856502.1| sn-glycerol-3-phosphate-binding lip... 879 0.0 gi|340627826|ref|YP_004746278.1| putative Sn-glycerol-3-phosphat... 808 0.0 gi|289758950|ref|ZP_06518328.1| sn-glycerol-3-phosphate-binding ... 690 0.0 gi|240171292|ref|ZP_04749951.1| sn-glycerol-3-phosphate-binding ... 675 0.0 gi|183981913|ref|YP_001850204.1| ABC-type sugar transport protei... 635 4e-180 gi|229489125|ref|ZP_04382991.1| ABC sugar transporter, solute-bi... 548 6e-154 gi|226308453|ref|YP_002768413.1| ABC transporter substrate-bindi... 547 1e-153 gi|111022083|ref|YP_705055.1| sugar ABC transporter solute-bindi... 538 5e-151 gi|343927706|ref|ZP_08767174.1| putative ABC transporter substra... 517 1e-144 gi|254232928|ref|ZP_04926255.1| sn-glycerol-3-phosphate-binding ... 505 6e-141 gi|15842374|ref|NP_337411.1| sugar ABC transporter, sugar-bindin... 478 7e-133 gi|333918702|ref|YP_004492283.1| sugar ABC transporter solute-bi... 461 2e-127 gi|334564203|ref|ZP_08517194.1| sn-glycerol-3-phosphate transpor... 430 3e-118 gi|121638713|ref|YP_978937.1| putative sn-glycerol-3-phosphate-b... 427 1e-117 gi|237786222|ref|YP_002906927.1| sn-glycerol-3-phosphate transpo... 424 2e-116 gi|25028072|ref|NP_738126.1| putative glycerol-3-phosphate-bindi... 423 3e-116 gi|255323853|ref|ZP_05364979.1| secreted sn-glycerol-3-phosphate... 414 1e-113 gi|311739853|ref|ZP_07713687.1| sn-Glycerol-3-phosphate ABC supe... 414 2e-113 gi|319947671|ref|ZP_08021889.1| ABC sugar transporter, solute-bi... 409 7e-112 gi|19552602|ref|NP_600604.1| ABC-type transporter, periplasmic c... 405 6e-111 gi|145295520|ref|YP_001138341.1| hypothetical protein cgR_1448 [... 405 8e-111 gi|289751493|ref|ZP_06510871.1| sn-glycerol-3-phosphate-binding ... 377 2e-102 gi|309811149|ref|ZP_07704945.1| ABC transporter, solute-binding ... 376 4e-102 gi|227547723|ref|ZP_03977772.1| sugar ABC superfamily ATP bindin... 360 2e-97 gi|227496128|ref|ZP_03926434.1| sugar ABC superfamily ATP bindin... 356 4e-96 gi|227488070|ref|ZP_03918386.1| ABC sugar transporter, solute-bi... 355 7e-96 gi|152964267|ref|YP_001360051.1| extracellular solute-binding pr... 353 3e-95 gi|269795192|ref|YP_003314647.1| carbohydrate-binding protein [S... 353 4e-95 gi|296141202|ref|YP_003648445.1| family 1 extracellular solute-b... 345 9e-93 gi|229819391|ref|YP_002880917.1| family 1 extracellular solute-b... 331 2e-88 gi|163846846|ref|YP_001634890.1| extracellular solute-binding pr... 329 5e-88 gi|256833456|ref|YP_003162183.1| extracellular solute-binding pr... 327 2e-87 gi|219849081|ref|YP_002463514.1| family 1 extracellular solute-b... 327 3e-87 gi|297627494|ref|YP_003689257.1| Extracellular solute-binding pr... 318 9e-85 gi|334335797|ref|YP_004540949.1| extracellular solute-binding pr... 316 5e-84 gi|257070083|ref|YP_003156338.1| carbohydrate-binding protein [B... 313 4e-83 gi|220913408|ref|YP_002488717.1| family 1 extracellular solute-b... 312 6e-83 gi|156740138|ref|YP_001430267.1| extracellular solute-binding pr... 306 4e-81 gi|119964456|ref|YP_948635.1| secreted sn-glycerol-3-phosphate-b... 305 7e-81 gi|148658642|ref|YP_001278847.1| extracellular solute-binding pr... 305 8e-81 gi|116671494|ref|YP_832427.1| extracellular solute-binding prote... 305 8e-81 gi|221635674|ref|YP_002523550.1| extracellular solute-binding pr... 301 1e-79 gi|269839323|ref|YP_003324015.1| extracellular solute-binding pr... 282 9e-74 gi|46204840|ref|ZP_00049406.2| COG1653: ABC-type sugar transport... 280 3e-73 gi|148273422|ref|YP_001222983.1| putative sugar ABC transporter ... 272 9e-71 gi|170782749|ref|YP_001711083.1| putative substrate-binding tran... 267 3e-69 gi|229820000|ref|YP_002881526.1| family 1 extracellular solute-b... 219 7e-55 >gi|15609970|ref|NP_217349.1| sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium tuberculosis H37Rv] gi|148662674|ref|YP_001284197.1| sn-glycerol-3-phosphate ABC transporter substrate-binding protein UspB [Mycobacterium tuberculosis H37Ra] gi|148824023|ref|YP_001288777.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis F11] 60 more sequence titles Length=436 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH Sbjct 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL Sbjct 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 Query 421 QVILDRQIMRKLAGHG 436 QVILDRQIMRKLAGHG Sbjct 421 QVILDRQIMRKLAGHG 436 >gi|298526302|ref|ZP_07013711.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis 94_M4241A] gi|298496096|gb|EFI31390.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis 94_M4241A] Length=436 Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/436 (99%), Positives = 435/436 (99%), Gaps = 0/436 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 YRNSIHGKGYAAVANDIANEFATGIL SAVASTGSLAGITASARFDFGAAPLPTGPDAAP Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILTSAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH Sbjct 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL Sbjct 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 Query 421 QVILDRQIMRKLAGHG 436 QVILDRQIMRKLAGHG Sbjct 421 QVILDRQIMRKLAGHG 436 >gi|339632842|ref|YP_004724484.1| Sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium africanum GM041182] gi|339332198|emb|CCC27908.1| putative Sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium africanum GM041182] Length=436 Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/436 (99%), Positives = 435/436 (99%), Gaps = 0/436 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH Sbjct 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 YL DNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL Sbjct 361 YLVDNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 Query 421 QVILDRQIMRKLAGHG 436 QVILDRQIMRKLAGHG Sbjct 421 QVILDRQIMRKLAGHG 436 >gi|31794009|ref|NP_856502.1| sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium bovis AF2122/97] gi|31619603|emb|CAD95042.1| PROBABLE Sn-GLYCEROL-3-PHOSPHATE-BINDING LIPOPROTEIN UGPB [Mycobacterium bovis AF2122/97] Length=436 Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/436 (99%), Positives = 433/436 (99%), Gaps = 0/436 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL GVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALIGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRG QSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGLQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSL GITASARFDFGAAPLPTGPDAAP Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLPGITASARFDFGAAPLPTGPDAAP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH Sbjct 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL Sbjct 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 Query 421 QVILDRQIMRKLAGHG 436 QVILDRQIMRKLAGHG Sbjct 421 QVILDRQIMRKLAGHG 436 >gi|340627826|ref|YP_004746278.1| putative Sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium canettii CIPT 140010059] gi|340006016|emb|CCC45186.1| putative Sn-glycerol-3-phosphate-binding lipoprotein UGPB [Mycobacterium canettii CIPT 140010059] Length=436 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/436 (98%), Positives = 431/436 (99%), Gaps = 0/436 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSS+AERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSSAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGP LQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLT+PATIAAGNF Sbjct 181 DEWGPALQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTKPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGP AAP Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPGAAP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNP NTA+FSQ+TGYLPVRKSAVDD SER Sbjct 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPENTAFFSQRTGYLPVRKSAVDDPSERQ 360 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 YLADNPRARVALDQLPHTRTQDYARVFLPGGDR+ISAGLESIGLRGADVTKTFTNIQKRL Sbjct 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRVISAGLESIGLRGADVTKTFTNIQKRL 420 Query 421 QVILDRQIMRKLAGHG 436 QVILDRQIMRKLAGHG Sbjct 421 QVILDRQIMRKLAGHG 436 >gi|289758950|ref|ZP_06518328.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis T85] gi|289714514|gb|EFD78526.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis T85] Length=338 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/338 (99%), Positives = 338/338 (100%), Gaps = 0/338 (0%) Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +LDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY Sbjct 1 MLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 60 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFG 218 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFG Sbjct 61 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFG 120 Query 219 GAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAG 278 GAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAG Sbjct 121 GAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAG 180 Query 279 ITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAY 338 ITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAY Sbjct 181 ITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAY 240 Query 339 FSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAG 398 FSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAG Sbjct 241 FSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAG 300 Query 399 LESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG 436 LESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG Sbjct 301 LESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG 338 >gi|240171292|ref|ZP_04749951.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium kansasii ATCC 12478] Length=411 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/399 (81%), Positives = 353/399 (89%), Gaps = 0/399 (0%) Query 38 PIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDV 97 PI FWS HPG S+A ERELI RFQ RFP L VKLIDAGKDY+EV QKFNAALIGTDVPDV Sbjct 13 PITFWSCHPGTSTAVERELINRFQRRFPDLPVKLIDAGKDYEEVVQKFNAALIGTDVPDV 72 Query 98 VLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLF 157 VLLDD WWFHFALSGV+T L+DLF +VG+DT+DYVDSLLADYEFNGRHYA+PYARSTPLF Sbjct 73 VLLDDIWWFHFALSGVITPLEDLFDEVGLDTSDYVDSLLADYEFNGRHYALPYARSTPLF 132 Query 158 YYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAF 217 YYNKA W + GLPDRGPQ+W EFDEWGP+LQR V AG AHGWAN LISWTFQGPNW F Sbjct 133 YYNKAVWDRVGLPDRGPQTWQEFDEWGPQLQRAVTAGNWAHGWANDTLISWTFQGPNWTF 192 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GGAYSD+WTL T+PATIAAGN+YR+SIH KGYAA+ANDI NEFATGI+ASA+ASTG+L Sbjct 193 GGAYSDEWTLKFTDPATIAAGNYYRDSIHRKGYAAIANDINNEFATGIVASALASTGALV 252 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 GITA+ARF+FG +PLPTGP AP CPTGGAGLAIP KLS ERKVNALKFIAF+TN NTA Sbjct 253 GITAAARFNFGVSPLPTGPGGAPGCPTGGAGLAIPTKLSHERKVNALKFIAFITNAANTA 312 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 YFSQ+TGYLPVRKSAVDD SE+ YLA NPRARVALDQLPHTR QDYARVFLPGG+RIIS Sbjct 313 YFSQRTGYLPVRKSAVDDTSEQQYLAANPRARVALDQLPHTRPQDYARVFLPGGNRIIST 372 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG 436 GLESIGL+GADVT TF +I ++L++ILDRQI RKL GHG Sbjct 373 GLESIGLKGADVTSTFADINRQLKIILDRQIKRKLPGHG 411 >gi|183981913|ref|YP_001850204.1| ABC-type sugar transport protein [Mycobacterium marinum M] gi|183175239|gb|ACC40349.1| ABC-type sugar transport protein [Mycobacterium marinum M] Length=437 Score = 635 bits (1638), Expect = 4e-180, Method: Compositional matrix adjust. Identities = 323/437 (74%), Positives = 370/437 (85%), Gaps = 1/437 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAG-MGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGR 59 M+ ++RR+FL+LA+AAA + S+KSG GPI FWS+HPGQSS E+ LI R Sbjct 1 MNSMHRRRFLSLASAAAAGVTAGCAGITNNVSIKSGPGPISFWSNHPGQSSGVEKVLIDR 60 Query 60 FQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDD 119 FQ +FP LSVKL+DAG DYDEVA+KFNAALIG DVPDVV+LDD WWFHFALSGV++ LD Sbjct 61 FQQQFPGLSVKLVDAGMDYDEVAEKFNAALIGDDVPDVVVLDDIWWFHFALSGVISPLDK 120 Query 120 LFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSE 179 LF Q+GVDT+DYVD+LLADYEFNGRHYA+PYARSTPLFYYNKA WQ+AGLPDRGP SW E Sbjct 121 LFRQIGVDTSDYVDTLLADYEFNGRHYALPYARSTPLFYYNKAVWQRAGLPDRGPNSWQE 180 Query 180 FDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGN 239 FD+WGP LQRVV + AHGWANA+LISWTFQG NW F G+YSD WTL T+P TIAAGN Sbjct 181 FDDWGPRLQRVVDERQWAHGWANAELISWTFQGVNWTFDGSYSDLWTLRFTDPDTIAAGN 240 Query 240 FYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAA 299 FYR+SIH K YAAVAN+IANEFATGI+ASAVASTGSL GIT A+FDFGAAP+PTGP A Sbjct 241 FYRDSIHTKRYAAVANNIANEFATGIMASAVASTGSLTGITQMAKFDFGAAPVPTGPGGA 300 Query 300 PACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASER 359 P CPTGGAGLAIP KLS+ERK NAL+FI ++TNP NTAYFSQ+TGYL VRKSA D SE+ Sbjct 301 PGCPTGGAGLAIPTKLSDERKRNALRFIEYITNPVNTAYFSQRTGYLAVRKSAADVPSEQ 360 Query 360 HYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKR 419 YLAD+PRARVA++QLPHTR QDYARVFLPG DRIISAGLESIGLRG +V KTF +I+++ Sbjct 361 KYLADHPRARVAINQLPHTRPQDYARVFLPGADRIISAGLESIGLRGTNVAKTFASIERQ 420 Query 420 LQVILDRQIMRKLAGHG 436 LQ+ILDRQI+RKL HG Sbjct 421 LQIILDRQIVRKLRQHG 437 >gi|229489125|ref|ZP_04382991.1| ABC sugar transporter, solute-binding component [Rhodococcus erythropolis SK121] gi|229324629|gb|EEN90384.1| ABC sugar transporter, solute-binding component [Rhodococcus erythropolis SK121] Length=443 Score = 548 bits (1413), Expect = 6e-154, Method: Compositional matrix adjust. Identities = 271/442 (62%), Positives = 323/442 (74%), Gaps = 11/442 (2%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGP---------IDFWSSHPGQSSA 51 M +NRR FL+L A A A A G GGS +G I FWS+HPG+S+ Sbjct 1 MANMNRRGFLSLGGAIAAGAALTACAGSGGSSADAAGTSGASGDSNTITFWSNHPGKSTD 60 Query 52 AERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALS 111 E+ELI RFQ ++P L V L+D GK+Y+EVAQKFNAAL G DVPDVV+L D WWF++AL+ Sbjct 61 VEKELINRFQTKYPDLKVNLVDGGKNYEEVAQKFNAALSGGDVPDVVVLSDVWWFNYALA 120 Query 112 GVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPD 171 G + LD LF +VGVD+ DYVDSLLADY F G+HYA+PYARSTPLFYYNKA W QAGLPD Sbjct 121 GAIEPLDGLFSEVGVDSADYVDSLLADYLFQGKHYALPYARSTPLFYYNKAVWSQAGLPD 180 Query 172 RGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLT 230 RGP +W EFDEWGPELQ+VVG G+ AHGW NA D + WT++GP W FGG+YSD+W L L Sbjct 181 RGPATWQEFDEWGPELQKVVGNGKLAHGWGNAKDYLGWTYEGPIWTFGGSYSDQWNLQLD 240 Query 231 EPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAA 290 TIAAG F + IH K YAAV+ DIANEF TGILAS +ASTG L+GI +A FDFG A Sbjct 241 NEKTIAAGQFLSSMIHDKKYAAVSTDIANEFGTGILASTIASTGDLSGIKKTANFDFGTA 300 Query 291 PLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRK 350 LP D P CPTGGAGLAIP+K+S++RK NALKFI F+TN NTAYFSQ GY+PVRK Sbjct 301 FLP-AVDGTPGCPTGGAGLAIPSKISDQRKKNALKFIDFITNGENTAYFSQNVGYMPVRK 359 Query 351 SAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVT 410 SA + S + +L NP +R A+DQL TR+QDYARVF+PGGD+II GLE I L+ ADV Sbjct 360 SATSEPSMKAFLDANPNSRTAVDQLSRTRSQDYARVFVPGGDQIIGTGLEQIALQKADVA 419 Query 411 KTFTNIQKRLQVILDRQIMRKL 432 TF + +LQ I+DRQI KL Sbjct 420 STFAGVATQLQQIIDRQITPKL 441 >gi|226308453|ref|YP_002768413.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226187570|dbj|BAH35674.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length=443 Score = 547 bits (1410), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 270/442 (62%), Positives = 322/442 (73%), Gaps = 11/442 (2%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGP---------IDFWSSHPGQSSA 51 M +NRR FL+L A A A A G GGS +G I FWS+HPG+S+ Sbjct 1 MANMNRRGFLSLGGAIAAGAALTACAGSGGSSADAAGTSGASGESNTITFWSNHPGKSTD 60 Query 52 AERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALS 111 E+ELI RFQ ++P L V L+D GK+Y+EVAQKFNAAL G DVPDVV+L D WWF++AL+ Sbjct 61 VEKELINRFQTKYPDLKVNLVDGGKNYEEVAQKFNAALSGGDVPDVVVLSDVWWFNYALA 120 Query 112 GVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPD 171 G + LD LF +VGVD+ DYVDSLLADY F G+HYA+PYARSTPLFYYNKA W QAGLPD Sbjct 121 GAIEPLDGLFSEVGVDSADYVDSLLADYLFQGKHYALPYARSTPLFYYNKAVWSQAGLPD 180 Query 172 RGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLT 230 RGP +W EFDEWGPELQ+VVG G+ AHGW NA D + WT++GP W FGG+YSD+W L Sbjct 181 RGPATWQEFDEWGPELQKVVGNGKLAHGWGNAKDYLGWTYEGPIWTFGGSYSDQWNLQFD 240 Query 231 EPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAA 290 TIAAG F + IH K YAAV+ DIANEF TGILAS +ASTG L+GI +A FDFG A Sbjct 241 NEKTIAAGQFLSSMIHDKKYAAVSTDIANEFGTGILASTIASTGDLSGIKKTANFDFGTA 300 Query 291 PLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRK 350 LP D P CPTGGAGLAIP+K+S++RK NALKFI F+TN NTAYFSQ GY+PVRK Sbjct 301 FLP-AVDGTPGCPTGGAGLAIPSKISDQRKKNALKFIDFITNGENTAYFSQNVGYMPVRK 359 Query 351 SAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVT 410 SA + S + +L NP +R A+DQL TR+QDYARVF+PGGD+II GLE I L+ ADV Sbjct 360 SATSEPSMKAFLDANPNSRTAVDQLSRTRSQDYARVFVPGGDQIIGTGLEQIALQKADVA 419 Query 411 KTFTNIQKRLQVILDRQIMRKL 432 TF + +LQ I+DRQI KL Sbjct 420 STFAGVATQLQQIIDRQITPKL 441 >gi|111022083|ref|YP_705055.1| sugar ABC transporter solute-binding component [Rhodococcus jostii RHA1] gi|110821613|gb|ABG96897.1| ABC sugar transporter, solute-binding component [Rhodococcus jostii RHA1] Length=435 Score = 538 bits (1387), Expect = 5e-151, Method: Compositional matrix adjust. Identities = 258/395 (66%), Positives = 308/395 (78%), Gaps = 3/395 (0%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I FWS+HPG+S ERELI RFQ ++P L+V L+D GK+Y+EV+QKFNAAL G ++PDVV Sbjct 41 ITFWSNHPGKSQDVERELINRFQAKYPDLTVNLVDGGKNYEEVSQKFNAALSGGELPDVV 100 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +L D WWF++AL+G + LD LFG+VGVD++DYVDSLLADY F GRHYA+PYARSTPLFY Sbjct 101 VLSDVWWFNYALTGAIEPLDGLFGEVGVDSSDYVDSLLADYLFEGRHYALPYARSTPLFY 160 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK W QAGLPDRGP +W EFDEWGPELQRV+G G+ AHGW +A + + WTF+GP W F Sbjct 161 YNKQVWAQAGLPDRGPATWQEFDEWGPELQRVMGGGKLAHGWGDAKNYLGWTFEGPVWTF 220 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GGAYSD+W L + T+AAG F ++ IH K YAAV++DIANEF GILAS +ASTG L+ Sbjct 221 GGAYSDQWDLKFGDEKTLAAGTFLKDMIHTKKYAAVSSDIANEFGAGILASTIASTGDLS 280 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 GIT SA FDFG A LP AP CPTGGAGLAIPA++S+ERK NAL FI FVTN NTA Sbjct 281 GITKSAAFDFGTAFLPA--SGAPGCPTGGAGLAIPARISDERKKNALTFIDFVTNGENTA 338 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 YFSQ GY+PVRKSAV+D S + YL NP AR A+DQL TR+QDYARVF+PGGD+II Sbjct 339 YFSQNVGYMPVRKSAVEDPSMKAYLDANPNARTAVDQLAKTRSQDYARVFVPGGDQIIGT 398 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 GLE I L+ ADV TF + +LQ I+DRQI KL Sbjct 399 GLEQIALQNADVAATFAGVGTQLQQIIDRQITPKL 433 >gi|343927706|ref|ZP_08767174.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] gi|343762347|dbj|GAA14100.1| putative ABC transporter substrate-binding protein [Gordonia alkanivorans NBRC 16433] Length=438 Score = 517 bits (1332), Expect = 1e-144, Method: Compositional matrix adjust. Identities = 240/395 (61%), Positives = 303/395 (77%), Gaps = 2/395 (0%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 + FWS+HPG+S+ E+ELI RF+ P + VKL+D GK+Y+EVAQKFNAAL G VPD+V Sbjct 43 LTFWSNHPGKSADVEKELISRFEAANPDIKVKLVDGGKNYEEVAQKFNAALSGGSVPDIV 102 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +L D WWF+FAL G +T LDDLFG+ GV+T++YV SL+ DY +N +H+A+PYARSTPLFY Sbjct 103 VLSDVWWFNFALQGAITPLDDLFGKAGVNTSEYVASLVEDYNWNDQHWALPYARSTPLFY 162 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK W +AGLPDRGP SW EF EWGP +Q+VVG+G+ AHGW NA D + WTF+GP W F Sbjct 163 YNKDVWAKAGLPDRGPASWQEFGEWGPRIQQVVGSGKKAHGWGNATDYLGWTFEGPTWTF 222 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GGAYSD+W L T+P TI A + +SI+ YAA++NDIA +F+ GI+AS +ASTG L+ Sbjct 223 GGAYSDRWDLKFTDPKTIEAAQYLSDSINKDKYAAISNDIAADFSAGIIASTIASTGDLS 282 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 G+T A+F FG A LP PD CPTGGAGLAIPAK+S+ERKVNAL+FI F TN NTA Sbjct 283 GVTKDAKFSFGTAFLP-APDGTKGCPTGGAGLAIPAKISDERKVNALRFIDFFTNTANTA 341 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 YFSQ GY+PVR A DD S + +LA+NP + A++QLP+T++QDYARVFLPG D++I Sbjct 342 YFSQNVGYMPVRTGAADDPSMKKFLAENPNFKTAIEQLPNTKSQDYARVFLPGADKVIGT 401 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 G E IGLR ADVTKT ++Q++LQ I D QI KL Sbjct 402 GYEQIGLRNADVTKTLGDVQQQLQRIYDGQIKSKL 436 >gi|254232928|ref|ZP_04926255.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis C] gi|124601987|gb|EAY60997.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis C] Length=373 Score = 505 bits (1300), Expect = 6e-141, Method: Compositional matrix adjust. Identities = 277/278 (99%), Positives = 277/278 (99%), Gaps = 1/278 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAG 278 YRNSIHGKGYAAVANDIANEFATGILASAVASTG LAG Sbjct 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTG-LAG 277 >gi|15842374|ref|NP_337411.1| sugar ABC transporter, sugar-binding protein [Mycobacterium tuberculosis CDC1551] gi|13882673|gb|AAK47225.1| sugar ABC transporter, sugar-binding protein [Mycobacterium tuberculosis CDC1551] Length=350 Score = 478 bits (1231), Expect = 7e-133, Method: Compositional matrix adjust. Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%) Query 202 NADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEF 261 NADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEF Sbjct 116 NADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEF 175 Query 262 ATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKV 321 ATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKV Sbjct 176 ATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKV 235 Query 322 NALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQ 381 NALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQ Sbjct 236 NALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQ 295 Query 382 DYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG 436 DYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG Sbjct 296 DYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG 350 >gi|333918702|ref|YP_004492283.1| sugar ABC transporter solute-binding protein [Amycolicicoccus subflavus DQS3-9A1] gi|333480923|gb|AEF39483.1| ABC sugar transporter, solute-binding component [Amycolicicoccus subflavus DQS3-9A1] Length=439 Score = 461 bits (1185), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 229/396 (58%), Positives = 284/396 (72%), Gaps = 5/396 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I FWS+HPG S E ELI RF+ +SV+LI AGK+Y+EVAQKFNA+L G + PDVV Sbjct 45 ITFWSNHPGTSRDVELELIRRFEAE-NDISVQLISAGKNYEEVAQKFNASLAGGEQPDVV 103 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +L D WF++AL+ + LD F GV+ DYVD+LLADY F+G H+A+PYARSTPLFY Sbjct 104 VLSDVGWFNYALNKTIEPLDTHFSSAGVEPDDYVDALLADYLFDGSHFALPYARSTPLFY 163 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK WQ+ GLPDRGP+SW EF EW PELQ+ +G G+ AH W NA D ++WTFQGPNW F Sbjct 164 YNKDLWQRVGLPDRGPESWQEFGEWAPELQQAIGNGKFAHSWGNAIDYLAWTFQGPNWTF 223 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GGAYS +W L LT+ TI AGN+ R+ IH YA V+ DIA +FA G+ S +ASTGSL+ Sbjct 224 GGAYSQEWDLKLTDERTIEAGNWLRDQIHTARYANVSPDIATDFAAGLCGSTIASTGSLS 283 Query 278 GITASA-RFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNT 336 GITA+A F+ G A LP P CPTGGAGLAIP+ + ++RK NALKFI F+TN NT Sbjct 284 GITATATSFEVGTAFLPR--TEQPGCPTGGAGLAIPSGIPDQRKENALKFIEFITNAENT 341 Query 337 AYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIIS 396 AYFSQ Y+PVRK+AV+ YL DNP AR A+DQLP T QD ARVF+PG D+I+ Sbjct 342 AYFSQNVSYMPVRKTAVESDEFAQYLNDNPNARTAVDQLPFTGPQDNARVFVPGADQILG 401 Query 397 AGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 G E I L+ ADV TF ++Q+++Q I+DRQI L Sbjct 402 TGFERIALQNADVESTFADVQEQIQRIIDRQIAPNL 437 >gi|334564203|ref|ZP_08517194.1| sn-glycerol-3-phosphate transport system, solute- binding protein [Corynebacterium bovis DSM 20582] Length=459 Score = 430 bits (1105), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 225/432 (53%), Positives = 289/432 (67%), Gaps = 5/432 (1%) Query 4 LNRRQFLALAA-AAAGVT-AGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRFQ 61 L+RR FLALA AG+ + CAG GG + I +WSSHPG S E+ELI RF+ Sbjct 30 LSRRSFLALAGLTGAGLALSACAGTGGTTVQGGDANTITWWSSHPGTSKEVEQELIRRFR 89 Query 62 DRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLF 121 ++ P ++V L+DAGK+Y E AQKFNAAL G D+PDVVLL D WWF+FAL+G +T + L Sbjct 90 EKHPDITVNLVDAGKNYAETAQKFNAALSGGDLPDVVLLSDVWWFNFALTGQITDIGALA 149 Query 122 GQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFD 181 G+DT+ +V SL DY F HYA+P+ARSTPLFYYNK AW AGLPDRGP SW E Sbjct 150 KDNGIDTSTFVPSLYDDYSFRDGHYAMPFARSTPLFYYNKDAWSAAGLPDRGPTSWQEMA 209 Query 182 EWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 +WG +LQ + R AHGW +A + +SWTF+G W GGAYS W LTL T+ A + Sbjct 210 DWGAKLQGGLDGNRRAHGWGDAKNYMSWTFEGALWTMGGAYSRGWDLTLDSDETVKAVQW 269 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 R+S+ G+A V+ D+A++F+ G+LAS VASTG L+GIT +A F G A LP P Sbjct 270 LRSSVR-DGWATVSKDLASDFSAGLLASTVASTGDLSGITKNATFPVGTAFLPN-PTGQG 327 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 CPTGG+GLA+P+ +S+ERK NA+ FI FVTNP NTAY+S+Q GY+PVR +A DD ++ Sbjct 328 GCPTGGSGLAVPSNISDERKRNAVTFIDFVTNPANTAYWSRQVGYMPVRTTAADDPEQKA 387 Query 361 YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 ++ADNP R A +QLP TR QD ARVF+ GGD+ I A LE++ DV + + L Sbjct 388 FMADNPNYRTATEQLPTTRPQDNARVFIGGGDQSIGAVLETLATTDKDVRGELSRVTDEL 447 Query 421 QVILDRQIMRKL 432 Q DR I KL Sbjct 448 QATFDRDIKPKL 459 >gi|121638713|ref|YP_978937.1| putative sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991205|ref|YP_002645894.1| putative sn-glycerol-3-phosphate-transport integral membrane protein ABC transporter [Mycobacterium bovis BCG str. Tokyo 172] gi|121494361|emb|CAL72842.1| Probable Sn-glycerol-3-phosphate-binding lipoprotein ugpB [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774320|dbj|BAH27126.1| putative sn-glycerol-3-phosphate-transport integral membrane protein ABC transporter [Mycobacterium bovis BCG str. Tokyo 172] gi|341602751|emb|CCC65429.1| probable Sn-glycerol-3-phosphate-binding lipoprotein ugpB [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=210 Score = 427 bits (1099), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 208/210 (99%), Positives = 208/210 (99%), Gaps = 0/210 (0%) Query 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF Sbjct 1 MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF 60 Query 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL 120 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL GVLTALDDL Sbjct 61 QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALIGVLTALDDL 120 Query 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF 180 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRG QSWSEF Sbjct 121 FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGLQSWSEF 180 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTF 210 DEWGPELQRVVGAGRSAHGWANADLISWTF Sbjct 181 DEWGPELQRVVGAGRSAHGWANADLISWTF 210 >gi|237786222|ref|YP_002906927.1| sn-glycerol-3-phosphate transport system, solute- binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237759134|gb|ACR18384.1| sn-glycerol-3-phosphate transport system, solute- binding protein [Corynebacterium kroppenstedtii DSM 44385] Length=453 Score = 424 bits (1090), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 216/430 (51%), Positives = 284/430 (67%), Gaps = 9/430 (2%) Query 4 LNRRQFLALAAAAAGVT--AGCAG--MGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGR 59 ++RR FL LA AA T +GCAG GG I +WSSHPGQS E+ELI R Sbjct 22 ISRRSFLGLAGAALATTALSGCAGTRFSPGGQAHQDDNTITWWSSHPGQSKPVEQELIRR 81 Query 60 FQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDD 119 F+ P L+V LIDAGK+Y+E AQKFNAAL VPD+V+L D WWF+FAL+ +T ++D Sbjct 82 FEKDHPDLTVNLIDAGKNYEECAQKFNAALTRRTVPDIVMLSDVWWFNFALNEQITPIED 141 Query 120 LFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSE 179 + +VG+DT+ YV SL DY FNG+H+A+P+ARSTPLF+YNK W++A LPDRGP+SW E Sbjct 142 VASEVGLDTSTYVTSLYEDYAFNGKHFALPFARSTPLFFYNKDVWKRAVLPDRGPESWDE 201 Query 180 FDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAG 238 DEWGP LQ G HGW NA D +SWTF+GP W GGAYS +W T T TIAA Sbjct 202 MDEWGPRLQTDRQKG---HGWGNAVDYLSWTFEGPLWTKGGAYSKEWDFTFTSDETIAAV 258 Query 239 NFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDA 298 + + ++ GYAA++ +AN+F+ G+ AS +ASTG L GI ++A F G A LP P Sbjct 259 EWLKRTVSSDGYAAISQSLANDFSAGLYASVIASTGDLNGIVSNASFPVGTAALP-NPRG 317 Query 299 APACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASE 358 CPTGGAGLAIPA +S++RK NA FI ++TN NT ++S++ GY+PVRK A D Sbjct 318 TGGCPTGGAGLAIPAIISDKRKKNAATFINYITNTANTCFWSREVGYMPVRKDASADPEM 377 Query 359 RHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQK 418 + +L ++P + A++QLPHTR QD ARVF+PG D++I ESI A + T + K Sbjct 378 KTFLDEHPNYQTAINQLPHTRIQDPARVFVPGADQVIGGAFESILTNNAGIRSTMKKVDK 437 Query 419 RLQVILDRQI 428 + + QI Sbjct 438 EISRAYEAQI 447 >gi|25028072|ref|NP_738126.1| putative glycerol-3-phosphate-binding periplasmic protein [Corynebacterium efficiens YS-314] gi|259505624|ref|ZP_05748526.1| secreted sn-glycerol-3-phosphate-binding protein [Corynebacterium efficiens YS-314] gi|23493356|dbj|BAC18326.1| putative glycerol-3-phosphate-binding periplasmic protein [Corynebacterium efficiens YS-314] gi|259166789|gb|EEW51343.1| secreted sn-glycerol-3-phosphate-binding protein [Corynebacterium efficiens YS-314] Length=441 Score = 423 bits (1088), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 213/434 (50%), Positives = 287/434 (67%), Gaps = 12/434 (2%) Query 4 LNRRQFLALAAAAAG--VTAGCAGMGG------GGSVKSGSGPIDFWSSHPGQSSAAERE 55 L+RR FLA A CAG G + + + I +WS+HPG S E E Sbjct 7 LSRRHFLAAVGVAGAGATLTACAGTGASTDTADATTAEGATNTIVWWSNHPGNSKDVELE 66 Query 56 LIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLT 115 +I RF++ P L+V+L+DAG +Y EV+QKFNAAL G D+PDVV+L D WF+FA++G Sbjct 67 IISRFEEENPDLTVQLVDAGANYAEVSQKFNAALSGGDLPDVVVLSDTEWFNFAVNGATA 126 Query 116 ALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQ 175 +D++ + +DT+ YVDSL DYE +G HY +P+ARST LFYYN+ W +AGLPDRGP+ Sbjct 127 NIDEVAKRNNIDTSSYVDSLYNDYEHDGGHYGLPFARSTTLFYYNRELWNEAGLPDRGPE 186 Query 176 SWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPAT 234 SW EF EWGP++Q + +G+ A GW +A + +SWTF+GP W+ GG YS W LT P T Sbjct 187 SWQEFSEWGPKIQEAMDSGK-ALGWGDAVNYLSWTFEGPMWSLGGNYSVGWESRLTTPET 245 Query 235 IAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPT 294 I + + ++++ +G+A V+ D+ NEFATGI+ S + STGSLA + A+A FD+ APLP Sbjct 246 IRSVEWLKSTVD-EGWATVSTDLTNEFATGIVGSCIQSTGSLASVEAAATFDWAVAPLP- 303 Query 295 GPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVD 354 P ACPTGGAGL IP+ +SEER+ NA+KFI F+TN NT Y+S++TGY+PVRK A + Sbjct 304 NPTGEGACPTGGAGLGIPSGISEERQDNAIKFIDFLTNSANTGYWSRETGYVPVRKDAAE 363 Query 355 DASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFT 414 D R +L +NP VA++QLP TR QD RV LP GDR I LE I L GAD+ T Sbjct 364 DPEHRAFLDENPAYNVAVEQLPDTRVQDNYRVLLPNGDRTIGDALEKILLTGADIDVTLA 423 Query 415 NIQKRLQVILDRQI 428 +++L I R I Sbjct 424 ETEQQLDTIYKRDI 437 >gi|255323853|ref|ZP_05364979.1| secreted sn-glycerol-3-phosphate-binding protein [Corynebacterium tuberculostearicum SK141] gi|255299033|gb|EET78324.1| secreted sn-glycerol-3-phosphate-binding protein [Corynebacterium tuberculostearicum SK141] Length=440 Score = 414 bits (1065), Expect = 1e-113, Method: Compositional matrix adjust. Identities = 205/415 (50%), Positives = 273/415 (66%), Gaps = 11/415 (2%) Query 23 CAGMGG----GGSVKSGSGPID---FWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAG 75 CAG GG+ K G G + +WS+HPG S E+E+I RF+ P + V L+DAG Sbjct 22 CAGTSSTNPQGGNDKGGDGEVTELTWWSNHPGTSKDIEKEIISRFEKENPDIKVNLVDAG 81 Query 76 KDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSL 135 K+Y+E AQKFNAAL G D+PD+V+L D WW++FA++G + +DDL + +D + YV L Sbjct 82 KNYEEAAQKFNAALTGQDLPDIVVLSDVWWYNFAINGQIANVDDLAKEADIDLSTYVQPL 141 Query 136 LADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGR 195 DY ++G H+A+P+ARSTPLF+YNK AW++AGLPDRGP+SW E DEW +L + Sbjct 142 YEDYNYDGGHFALPFARSTPLFFYNKDAWKKAGLPDRGPKSWDEMDEWSKKLAE-ADSKM 200 Query 196 SAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGK-GYAAV 253 GW +A D + W FQGP W+ GGAYSD+W L T+ TI A + ++ K GY+ V Sbjct 201 KPFGWGDAVDYLGWIFQGPLWSKGGAYSDEWDLKFTDDKTIKAVEWLKDITDEKNGYSYV 260 Query 254 ANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPA 313 ND+A EF TG A+ V STG LAG+T +A+F+ G A LP P ACPTGGAGLAIPA Sbjct 261 GNDMAMEFGTGRAAATVLSTGDLAGLTDTAKFELGTAFLPN-PTGDGACPTGGAGLAIPA 319 Query 314 KLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALD 373 +S+ R++ A+K I F+TN NT Y+SQ GY+PVR +AVD+ ++ ++ DNP A+ Sbjct 320 GISKNRQLAAIKLIDFITNEENTCYWSQNVGYMPVRSTAVDNEDQKKFMKDNPNFETAIK 379 Query 374 QLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQI 428 QLP TR QD ARVFLPG D+ I E I DVTK T++QK LQ I D Q+ Sbjct 380 QLPETRPQDNARVFLPGADQEIGGAFEKIVTNRDDVTKVLTDLQKTLQSIYDNQV 434 >gi|311739853|ref|ZP_07713687.1| sn-Glycerol-3-phosphate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304926|gb|EFQ80995.1| sn-Glycerol-3-phosphate ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length=440 Score = 414 bits (1063), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 204/415 (50%), Positives = 273/415 (66%), Gaps = 11/415 (2%) Query 23 CAGMGG----GGSVKSGSGPID---FWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAG 75 CAG GG+ K G G + +WS+HPG S E+E+I RF+ P + V L+DAG Sbjct 22 CAGTSSTNPQGGNDKGGDGEVTELTWWSNHPGTSKDIEKEIISRFEKENPDIKVNLVDAG 81 Query 76 KDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSL 135 K+Y+E AQKFNAAL G D+PD+V+L D WW++FA++G + +DDL + +D + YV L Sbjct 82 KNYEEAAQKFNAALTGQDLPDIVVLSDVWWYNFAINGQIANVDDLAKEADIDLSTYVQPL 141 Query 136 LADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGR 195 DY ++G H+A+P+ARSTPLF+YNK AW++AGLPDRGP+SW E DEW +L + Sbjct 142 YEDYNYDGGHFALPFARSTPLFFYNKDAWKKAGLPDRGPKSWDEMDEWSKKLAE-ADSKM 200 Query 196 SAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRN-SIHGKGYAAV 253 GW +A D + W FQGP W+ GGAYSD W L T+ TI A + ++ + KGY+ V Sbjct 201 KPFGWGDAVDYLGWIFQGPLWSKGGAYSDDWDLKFTDDKTIKAVEWLKDITDEKKGYSYV 260 Query 254 ANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPA 313 ND+A EF TG A+ V STG LAG+T +A+F+ G A LP P ACPTGGAGLAIPA Sbjct 261 GNDMAMEFGTGRAAATVLSTGDLAGLTDTAKFELGTAFLPN-PTGDGACPTGGAGLAIPA 319 Query 314 KLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALD 373 +S+ R++ A+K I F+TN NT Y+SQ GY+PVR +AVD+ ++ ++ +NP A+ Sbjct 320 GISKNRQLAAIKLIDFITNEENTCYWSQNVGYMPVRSTAVDNEDQKKFMEENPNFETAIK 379 Query 374 QLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQI 428 QLP TR QD ARVFLPG D+ I E I DVTK T++QK LQ I D Q+ Sbjct 380 QLPETRPQDNARVFLPGADQEIGGAFEKIVTNRDDVTKVLTDLQKTLQSIYDNQV 434 >gi|319947671|ref|ZP_08021889.1| ABC sugar transporter, solute-binding component [Dietzia cinnamea P4] gi|319438661|gb|EFV93563.1| ABC sugar transporter, solute-binding component [Dietzia cinnamea P4] Length=442 Score = 409 bits (1050), Expect = 7e-112, Method: Compositional matrix adjust. Identities = 228/444 (52%), Positives = 288/444 (65%), Gaps = 15/444 (3%) Query 1 MDPLNRRQFLAL--AAAAAGVTAGCAGMGGGGSVKSGSG---------PIDFWSSHPGQS 49 M+PLNRR FL L A AA AGCAG GG + SG I FWS+HPG S Sbjct 1 MNPLNRRLFLGLLGATAATVTVAGCAGTGGDDTSGDASGGGGGGGDAGTITFWSNHPGDS 60 Query 50 SAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFA 109 A E ELI F P L+V L+D GK+Y+EVAQK NAAL G DVPDVV++ D WF+FA Sbjct 61 KAVEEELIANFSQENPDLTVNLVDGGKNYEEVAQKLNAALTGNDVPDVVVVSDVTWFNFA 120 Query 110 LSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGL 169 L+ LT LDDLF + GVDT+ YVD+L+ DYE G+ Y +P+ARSTPLFYYNK W +AGL Sbjct 121 LNDQLTPLDDLFAEAGVDTSSYVDALIGDYELEGKTYGLPFARSTPLFYYNKQIWDRAGL 180 Query 170 PDRGPQSWSEFDEWGPELQRVVGAGRSAHG-WANADLISWTFQGPNWAFGGAYSDKWTLT 228 PDRGP+SW EF +W P +Q +G G+ A + ++ + WT Q W GGA+S W T Sbjct 181 PDRGPESWDEFLDWAPRIQETIGEGKHAIAMYDGSNYLDWTMQNMVWDEGGAFSRDWEAT 240 Query 229 LTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFG 288 T+PATI AG I+ +G+ V+ D EF +G+ A A+ASTGSL +A+FDFG Sbjct 241 FTDPATI-AGVEKLKRINDEGFLVVSADSITEFGSGLAACAMASTGSLRTAIENAQFDFG 299 Query 289 AAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPV 348 A LP G A +CPTGGAGLAIPAK+S+ERK+NALKFI +T+ +TA F+Q TGY+PV Sbjct 300 TAFLP-GARANSSCPTGGAGLAIPAKISDERKINALKFIDSITSTQSTAIFAQATGYMPV 358 Query 349 RKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGAD 408 RK+A + R YLA+ P+A A+DQL TR QD ARVF+P G I GL+ + L G D Sbjct 359 RKNAREAEEIRDYLAETPQAGTAIDQLEFTRPQDNARVFVPNGGTRIGGGLDKV-LAGQD 417 Query 409 VTKTFTNIQKRLQVILDRQIMRKL 432 V + +Q Q I+D Q+ KL Sbjct 418 VRQVMEELQTETQQIIDTQLTPKL 441 >gi|19552602|ref|NP_600604.1| ABC-type transporter, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62390270|ref|YP_225672.1| sn-glycerol-3-phosphate-binding protein [Corynebacterium glutamicum ATCC 13032] gi|21324153|dbj|BAB98778.1| ABC-type transporter, periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|41325607|emb|CAF21396.1| secreted sn-glycerol-3-phosphate-binding protein [Corynebacterium glutamicum ATCC 13032] Length=438 Score = 405 bits (1042), Expect = 6e-111, Method: Compositional matrix adjust. Identities = 198/391 (51%), Positives = 264/391 (68%), Gaps = 4/391 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HP S E ELI RF+ P L V+L+DAG +Y EV+QKFNAAL G D+PD+V Sbjct 47 IVWWSNHPANSKDVELELISRFEAENPDLKVQLVDAGANYAEVSQKFNAALSGGDLPDLV 106 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +L D WF+FA++G +D++ + +DT+ YVDSL DY G HY +P+ARST LFY Sbjct 107 VLSDTEWFNFAINGATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFARSTVLFY 166 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK W +AGL DRGP+SW EF EWGP+LQ + +G AHGW +A + +SWTF+GP W+ Sbjct 167 YNKDLWAKAGLEDRGPESWEEFSEWGPKLQEAMDSGF-AHGWGDATNYLSWTFEGPMWSL 225 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GG YS+ W LT P TI A + ++++ +G+A V+ D+ NEFATG++ S + STG L+ Sbjct 226 GGNYSEGWESRLTTPETIRAVEWLKSTVD-EGFATVSTDVTNEFATGLIGSCIQSTGDLS 284 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 + +A FD+G A LP P ACPTGGAGL IP+ +SE+R+ NALKFI F+TN NT Sbjct 285 SVAGAASFDWGVAALPN-PTGEGACPTGGAGLGIPSGISEQRQDNALKFIDFLTNAANTG 343 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 Y+S++TGY+PVRK A D +L +NP VA++QLP TR+QD RV LP GDR I Sbjct 344 YWSRETGYVPVRKDAASDPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRTIGD 403 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQI 428 LE I L GAD+ T ++ +L I R I Sbjct 404 ALEKICLTGADIDVTLAEVETKLNTIYTRDI 434 >gi|145295520|ref|YP_001138341.1| hypothetical protein cgR_1448 [Corynebacterium glutamicum R] gi|140845440|dbj|BAF54439.1| hypothetical protein [Corynebacterium glutamicum R] gi|344043410|gb|EGV39103.1| hypothetical protein CgS9114_14527 [Corynebacterium glutamicum S9114] Length=438 Score = 405 bits (1041), Expect = 8e-111, Method: Compositional matrix adjust. Identities = 198/391 (51%), Positives = 264/391 (68%), Gaps = 4/391 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HP S E ELI RF+ P L V+L+DAG +Y EV+QKFNAAL G D+PD+V Sbjct 47 IVWWSNHPANSKDVELELISRFEAENPDLKVQLVDAGANYAEVSQKFNAALSGGDLPDLV 106 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 +L D WF+FA++G +D++ + +DT+ YVDSL DY G HY +P+ARST LFY Sbjct 107 VLSDTEWFNFAINGATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFARSTVLFY 166 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK W +AGL DRGP+SW EF EWGP+LQ + +G AHGW +A + +SWTF+GP W+ Sbjct 167 YNKDLWAKAGLEDRGPESWEEFSEWGPKLQEAMDSGF-AHGWGDATNYLSWTFEGPMWSL 225 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GG YS+ W LT P TI A + ++++ +G+A V+ D+ NEFATG++ S + STG L+ Sbjct 226 GGNYSEGWESRLTTPETIRAVEWLKSTVD-EGFATVSTDVTNEFATGLIGSCIQSTGDLS 284 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 + +A FD+G A LP P ACPTGGAGL IP+ +SE+R+ NALKFI F+TN NT Sbjct 285 SVAGAASFDWGVAALPN-PTGEGACPTGGAGLGIPSGISEQRQDNALKFIDFLTNAANTG 343 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 Y+S++TGY+PVRK A D +L +NP VA++QLP TR+QD RV LP GDR I Sbjct 344 YWSRETGYVPVRKDAASDPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRTIGD 403 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQI 428 LE I L GAD+ T ++ +L I R I Sbjct 404 ALEKICLTGADIDVTLAEVETQLNTIYTRDI 434 >gi|289751493|ref|ZP_06510871.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis T92] gi|289692080|gb|EFD59509.1| sn-glycerol-3-phosphate-binding lipoprotein ugpB [Mycobacterium tuberculosis T92] Length=187 Score = 377 bits (969), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%), Gaps = 0/187 (0%) Query 250 YAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGL 309 YAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGL Sbjct 1 YAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGL 60 Query 310 AIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRAR 369 AIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRAR Sbjct 61 AIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRAR 120 Query 370 VALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIM 429 VALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIM Sbjct 121 VALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIM 180 Query 430 RKLAGHG 436 RKLAGHG Sbjct 181 RKLAGHG 187 >gi|309811149|ref|ZP_07704945.1| ABC transporter, solute-binding protein [Dermacoccus sp. Ellin185] gi|308434879|gb|EFP58715.1| ABC transporter, solute-binding protein [Dermacoccus sp. Ellin185] Length=438 Score = 376 bits (965), Expect = 4e-102, Method: Compositional matrix adjust. Identities = 212/443 (48%), Positives = 269/443 (61%), Gaps = 18/443 (4%) Query 1 MDPLNRRQFLALAAAAAGVTAG---CAGMGGGGSVKSGSG----PIDFWSSHPGQSSAAE 53 M L+RR L A A VTAG CAG GG S + G I+FWS+HPG+S A E Sbjct 1 MSTLSRRNLFGLTAGAV-VTAGLSACAGSGGSSSGGNNGGGDSNTIEFWSNHPGKSKATE 59 Query 54 RELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGV 113 ++LI F+ P L VKL+ AGK Y +VAQKFNAAL G +PDVV++ D WF+FAL+ Sbjct 60 QKLIAEFEKANPNLKVKLVGAGKSYPDVAQKFNAALSGGSLPDVVIVSDTTWFNFALNDR 119 Query 114 LTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRG 173 L + L + + T DYV L DY++ +HYA+PY+RST +FYYNK AW++AGLPDR Sbjct 120 LADMSALTSENKLSTDDYVKGLYDDYKYEDKHYALPYSRSTVIFYYNKDAWKKAGLPDRA 179 Query 174 PQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAFGGAYSDKWTLTLTEP 232 P SW EF++W P+LQ +G+G+ A + +D + WTFQ W++GG YS WT T+ Sbjct 180 PTSWDEFEQWAPKLQSAMGSGKKAIVLDDGSDYLDWTFQSIAWSYGGGYSKDWTPTMASE 239 Query 233 ATIAAGNFYRNSIHG---KGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGA 289 T+ A I G KG+ + D +FA+GI A A+ STG LAG+ A F G Sbjct 240 GTVKAA----TKIQGWAKKGWMQTSKDSQADFASGIGACAIESTGGLAGVIKDASFKVGI 295 Query 290 APLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVR 349 LP P PTGGAGLA+P +S ER+ NA+KFI F+TN NT FSQ TGYLPVR Sbjct 296 GFLP-APGGIKTVPTGGAGLAVPKGISAERQKNAVKFIEFMTNKDNTITFSQATGYLPVR 354 Query 350 KSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADV 409 SA+DDA E+ YL NP VA+ QLP R QD RVFLPGG I L+ I + G+DV Sbjct 355 TSAMDDAKEKAYLEKNPEYAVAVKQLPKARPQDNVRVFLPGGGIDIGTSLDKI-IAGSDV 413 Query 410 TKTFTNIQKRLQVILDRQIMRKL 432 T + K LQ D QI KL Sbjct 414 KSTLEALDKALQAKYDSQIKPKL 436 >gi|227547723|ref|ZP_03977772.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080206|gb|EEI18169.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding protein [Corynebacterium lipophiloflavum DSM 44291] Length=421 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 197/423 (47%), Positives = 263/423 (63%), Gaps = 11/423 (2%) Query 15 AAAGVTAGCAGMGGGGSVKSGSGP--IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLI 72 A AG+TA G GS P I FWS+HPG S E LI F+ + P L V+L+ Sbjct 5 ATAGLTACAGGSMSAGSAGQEGDPSTITFWSNHPGSSRDTELALIEEFEKQNPDLDVELV 64 Query 73 DAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYV 132 AG +Y+EVAQ+FNAAL G D+PDVV+ D WF+FAL+ T L+DL+ + +D YV Sbjct 65 TAGSNYEEVAQRFNAALAGGDLPDVVVASDVTWFNFALNEATTPLEDLWQENNIDAESYV 124 Query 133 DSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP-DRGPQSWSEFDEWGPELQRVV 191 D+L DYE+NG+HY VPYARST L Y+N Q AGLP DRGP++W EFD+W +++ + Sbjct 125 DTLRDDYEYNGKHYGVPYARSTNLMYWNTDDLQAAGLPTDRGPETWQEFDQWAQKIKADL 184 Query 192 GAGRSAHGWAN-ADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGY 250 + A + ++ + W FQG WAF GAYSD+WT T T P TI AG F ++ + KG+ Sbjct 185 --NKPALTIPDGSNYLDWYFQGMVWAFDGAYSDEWTPTFTSPGTIEAGKFLQDQVR-KGH 241 Query 251 AAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLA 310 ++ D F G ++ + STGSL G+ SA F LP GP +P+ TGGAGLA Sbjct 242 VEISTDPTVAFGNGNVSGLLQSTGSLGGLNKSATVPFITTFLP-GP--SPSAATGGAGLA 298 Query 311 IPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARV 370 IP +S+ERK NA+KF F+TN NT FSQ TGY+PVRK AV + E +L +NP AR Sbjct 299 IPNGISDERKANAVKFADFMTNEENTITFSQATGYMPVRKDAVTNPREEQFLNENPNART 358 Query 371 ALDQL-PHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIM 429 A++QL +T+ QDYARVF+PGG + I A L+ I + DV F + K + ++ R I Sbjct 359 AIEQLGENTQPQDYARVFVPGGGQRIGAALDRITIGNEDVETVFDELNKETEQVVKRDIE 418 Query 430 RKL 432 KL Sbjct 419 PKL 421 >gi|227496128|ref|ZP_03926434.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding component [Actinomyces urogenitalis DSM 15434] gi|226834362|gb|EEH66745.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding component [Actinomyces urogenitalis DSM 15434] Length=435 Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 197/429 (46%), Positives = 262/429 (62%), Gaps = 8/429 (1%) Query 4 LNRRQFLALAAAAA--GVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRFQ 61 LNRR FL LA A+ A CAG G G G+G I FWS+HPG S E+ +I + Sbjct 5 LNRRLFLTLAGASTVTATLAACAGGGSGSQGDEGTGTIQFWSNHPGSSKDLEQAMIDAWN 64 Query 62 DRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLF 121 P +L+ AG Y+E+AQKFNAAL G D+PD+++ D WF+FAL+G ALD+L+ Sbjct 65 KANPDSPAELVTAGSSYEELAQKFNAALSGGDLPDIIVASDVTWFNFALNGQTEALDELW 124 Query 122 GQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP-DRGPQSWSEF 180 GVD+ D+VDSL DY G+HY +PY+RST L Y NK +AGLP DRGPQ+W EF Sbjct 125 TSEGVDSADFVDSLREDYALEGKHYGMPYSRSTCLMYLNKEMLAKAGLPTDRGPQTWEEF 184 Query 181 DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF 240 D+W P L G + D + W FQG W+FGGAYS W T T+ A+I AG F Sbjct 185 DQWAPALMEASGGKPALVVPDGTDYLDWYFQGMIWSFGGAYSKDWKATFTDEASIKAGTF 244 Query 241 YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP 300 + + G+ A+ D F+ G A + STGSLAG+ +A F+F A LP GP P Sbjct 245 LQEQV-AAGHIAIDADPTTTFSLGNAAGLLQSTGSLAGLAETATFEFITAYLP-GP--GP 300 Query 301 ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH 360 +CPTGGAG+A+ A +S ERK A+K + F+T+ NT FSQ TGY+PVR SA++ E Sbjct 301 SCPTGGAGIALVAGISPERKKKAIKLMDFLTSTQNTITFSQGTGYMPVRTSALEHPDEVA 360 Query 361 YLADNPRARVALDQL-PHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKR 419 +L NP AR A++QL +T++QD ARVF+ GG + I GL+ I L+ DV F +Q+ Sbjct 361 FLDANPNARTAINQLAENTKSQDAARVFVSGGGQRIGGGLDRITLKQEDVATVFAELQEE 420 Query 420 LQVILDRQI 428 Q +D+ I Sbjct 421 TQKTIDQDI 429 >gi|227488070|ref|ZP_03918386.1| ABC sugar transporter, solute-binding component [Corynebacterium glucuronolyticum ATCC 51867] gi|227541465|ref|ZP_03971514.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091932|gb|EEI27244.1| ABC sugar transporter, solute-binding component [Corynebacterium glucuronolyticum ATCC 51867] gi|227182747|gb|EEI63719.1| sugar ABC superfamily ATP binding cassette transporter, solute-binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length=439 Score = 355 bits (912), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 201/440 (46%), Positives = 263/440 (60%), Gaps = 17/440 (3%) Query 1 MDPLN----RRQFLALA---AAAAGVTAGCAGMGGGGSVKSGSG---PIDFWSSHPGQSS 50 M+PLN RR+ L L A A G+ A CAG + G + FWS+HP S Sbjct 1 MNPLNIEISRRKALGLGVMGATALGL-ASCAGGSTSAAGGGGQEGNGTLQFWSNHPASSK 59 Query 51 AAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL 110 E+E+I F P + V+L+ AG +Y+E+AQKFNAAL G D+PDV++ D WF+FA Sbjct 60 DMEQEMIDAFMAENPDIPVELVSAGANYEELAQKFNAALAGGDLPDVIVASDVTWFNFAF 119 Query 111 SGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP 170 + T LDDL+ +VG D YVD+L DY ++G+HY VPY RST L Y+N +AGLP Sbjct 120 NEATTPLDDLWKEVGTDQDSYVDTLREDYAYDGKHYGVPYCRSTCLMYFNTDILAKAGLP 179 Query 171 -DRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTL 229 DRGP++W EF EW P+L G + ++ + W FQG W FGGAYS +W T Sbjct 180 TDRGPKTWQEFAEWAPKLVEANGGKPAVVVPDGSNYLDWYFQGMIWTFGGAYSKEWEPTF 239 Query 230 TEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGA 289 T+P +I AG F + + GK Y V D +F G A + STGSL G+ +A F Sbjct 240 TDPKSIEAGEFLKEMV-GKRYIDVQTDPTVQFGAGNAAGLLESTGSLQGLNKTATIPFIT 298 Query 290 APLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVR 349 LP GP P CPTGGAGLA+ +S+ERK NA+KFI F+TN NT FSQ TGY+PVR Sbjct 299 TYLP-GP--TPGCPTGGAGLAVANGISDERKRNAVKFIDFMTNVENTVKFSQATGYMPVR 355 Query 350 KSAVDDASERHYLADNPRARVALDQL-PHTRTQDYARVFLPGGDRIISAGLESIGLRGAD 408 K A++ E+ YL DNP A+ A+ QL +T QDYARVF+PGG I L+ I + D Sbjct 356 KEAIEHPDEKAYLKDNPNAQTAIKQLAENTAPQDYARVFVPGGGARIGGALDRITVGQED 415 Query 409 VTKTFTNIQKRLQVILDRQI 428 VT F ++QK Q +D+QI Sbjct 416 VTAVFEDLQKETQKTIDQQI 435 >gi|152964267|ref|YP_001360051.1| extracellular solute-binding protein family 1 [Kineococcus radiotolerans SRS30216] gi|151358784|gb|ABS01787.1| extracellular solute-binding protein family 1 [Kineococcus radiotolerans SRS30216] Length=453 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 197/436 (46%), Positives = 265/436 (61%), Gaps = 19/436 (4%) Query 3 PLNRRQFLALAAA-AAGV-TAGCAG-------MGGGGSVK---SGSGPID---FWSSHPG 47 PL RR LALA A A G+ A C+G GG K SG P D W++HPG Sbjct 7 PLPRRGVLALAGAGAVGLGLAACSGPSTTAGETGGAEQAKTDWSGVTPADTVTVWTNHPG 66 Query 48 QSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFH 107 +S A E E + RF P ++V+ + AG +YDE++QKF AAL G+D+PD+VLL D WWF Sbjct 67 KSQAVEEEFLARFAKTNPDITVEFVTAGANYDEISQKFQAALTGSDLPDLVLLSDVWWFR 126 Query 108 FALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQA 167 +AL+G L L DL GVD +Y LLADY+++ + +AVPY RSTP+FYYNKA W A Sbjct 127 YALNGQLAPLGDLLPAAGVDVGNYQPGLLADYQYDDQQWAVPYCRSTPVFYYNKAHWAAA 186 Query 168 GLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANAD-LISWTFQGPNWAFGGAYSDKWT 226 GLPDRGP++WSEF++W P+LQ ++ +G SW Q W GGA S+ WT Sbjct 187 GLPDRGPETWSEFEQWLPKLQAAGTGAQAPYGLGKGTGNASWIHQNLIWGRGGALSEDWT 246 Query 227 LTLTEPATIAAGNFYRNSIHGKGYAAV-ANDIANEFATGILASAVASTGSLAGITASARF 285 +T+ P + A ++ R+ I +G+AAV ++D A++F G+ +S + STGSL+GI A A F Sbjct 247 MTVDSPEVLEASDYLRSFIT-RGWAAVSSSDQASDFGAGLYSSVIGSTGSLSGILAGAAF 305 Query 286 DFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGY 345 D G A LP GP A PTGGAG A+P K S E+++ A F+ F+ NTAYFSQ TGY Sbjct 306 DVGNAFLPGGP-AGRFTPTGGAGFAVPTKRSPEQQLAAATFLKFLAEDDNTAYFSQNTGY 364 Query 346 LPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLR 405 +PV AVD + A P + A+DQL + R QD ARVF+PGGD+ E + L+ Sbjct 365 MPVTTGAVDSGPMQEVYAQTPLFKTAVDQLANVRKQDNARVFVPGGDQSTVTAWEKVMLQ 424 Query 406 GADVTKTFTNIQKRLQ 421 GA + + Q +Q Sbjct 425 GAPSAEAWGTAQDEIQ 440 >gi|269795192|ref|YP_003314647.1| carbohydrate-binding protein [Sanguibacter keddieii DSM 10542] gi|269097377|gb|ACZ21813.1| carbohydrate-binding protein [Sanguibacter keddieii DSM 10542] Length=460 Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 179/400 (45%), Positives = 246/400 (62%), Gaps = 19/400 (4%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HPG S E ELI RF P ++VKL+ AG +YDEVAQ+F AA +++PD+V Sbjct 66 ITWWSNHPGASKPIEEELIKRFNAVHPEIAVKLVTAGANYDEVAQRFQAASSTSNLPDLV 125 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 + D WWF + L+G + LD++F + V+T D+ +L +DYEF+ +H+A PYARSTPLFY Sbjct 126 ISSDVWWFRYFLNGQIMPLDEIFSHLEVETADFNATLYSDYEFDSKHWAAPYARSTPLFY 185 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRV---------VGAGRSAHGWANADLISWT 209 YNK W AGLPDRGP++W+E +EW P ++ +G G S GW ++I Sbjct 186 YNKTVWAAAGLPDRGPKTWAELEEWAPAIREQLPADGAPLGLGTGTSWAGWWMENII--- 242 Query 210 FQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASA 269 W GGAYSD+W +TL P AAG F R + A V D FA GI S Sbjct 243 -----WGQGGAYSDEWKVTLDTPQAEAAGEFVRGLFNDSKVAGVGTDTQANFAAGIFGSF 297 Query 270 VASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAF 329 V STGSL G+ +A F+ G + LP GP+ + PTGG GLAIPA S E+++ A F+AF Sbjct 298 VGSTGSLKGLLDAADFELGTSFLPDGPNGS-GVPTGGTGLAIPASRSPEQQLAAAIFLAF 356 Query 330 VTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPH-TRTQDYARVFL 388 +T+P NTAYFS TGY+PVR SA + + A+ P+ R A+DQL TRTQD+ RVF+ Sbjct 357 ITDPDNTAYFSANTGYMPVRTSAQEGETMTEIYANTPQFRTAIDQLEQKTRTQDWVRVFV 416 Query 389 PGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQI 428 PGGD+I++ G+E + L+ + + I RL+ + Sbjct 417 PGGDQILTDGIEQMVLKNTPAAEAWAAITPRLEKAFSENV 456 >gi|296141202|ref|YP_003648445.1| family 1 extracellular solute-binding protein [Tsukamurella paurometabola DSM 20162] gi|296029336|gb|ADG80106.1| extracellular solute-binding protein family 1 [Tsukamurella paurometabola DSM 20162] Length=436 Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 187/395 (48%), Positives = 256/395 (65%), Gaps = 6/395 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 + F ++HPG S A E+ +I FQ ++V+L+D GKDY+EVAQKF +L G PD++ Sbjct 45 LQFLTNHPGSSKAIEQSIIDEFQKANSGITVELLDGGKDYEEVAQKFQTSLTGGTKPDII 104 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 ++ D WF+FAL+ + LD LF G++ DYVDSLLAD +F+G++Y +P+ARSTPLFY Sbjct 105 VVSDVTWFNFALNKQIEPLDGLFAGAGLNPADYVDSLLADGKFDGKYYTIPFARSTPLFY 164 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAF 217 YNK W++AGL DRGP+ W EF W P +Q +G + A A+ A+ I W F+G NW+ Sbjct 165 YNKDVWKKAGLEDRGPKDWDEFVAWAPRIQEAIGGDKKAIVLADSANYIDWVFEGWNWSK 224 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLA 277 GGAYSD W L T P ++AA ++ I GK + + + N+F G+ + STGSL Sbjct 225 GGAYSDGWDLKFTTPESVAAAQQLKDVI-GK-WGRLTSKPENDFGAGLAGVTLQSTGSLK 282 Query 278 GITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTA 337 IT +A+F+ G A LP GP +CPTGGAG+AI A +S++RK A+KFI F+TN N++ Sbjct 283 TITTTAKFEVGTAFLP-GPQGK-SCPTGGAGVAIAAGISDDRKAAAMKFIEFLTNAKNSS 340 Query 338 YFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISA 397 FSQ TGY+PVRKSAVDD S + ++A NP A+ QLP TR+QD ARVF+PGG R I Sbjct 341 TFSQGTGYMPVRKSAVDDPSMKEFIAKNPNFGTAVKQLPFTRSQDNARVFVPGGGRDIGQ 400 Query 398 GLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 L+ I G D +Q +Q +D QI KL Sbjct 401 ALQQIA-TGGDPAAVLGALQSTIQGKIDSQITPKL 434 >gi|229819391|ref|YP_002880917.1| family 1 extracellular solute-binding protein [Beutenbergia cavernae DSM 12333] gi|229565304|gb|ACQ79155.1| extracellular solute-binding protein family 1 [Beutenbergia cavernae DSM 12333] Length=470 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 168/397 (43%), Positives = 239/397 (61%), Gaps = 3/397 (0%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HPG + E I F + P + V+L+ AG +YDE+AQ+F AA ++PD+V Sbjct 74 ITWWSNHPGNTKELEESFIAAFNEEHPDIEVELVTAGANYDEIAQRFQAAAGTDEIPDLV 133 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 D WWF + ++G + +DD+F + VDT+D+V++L +DYE+ G HYA PYARSTPLFY Sbjct 134 GASDVWWFRYFVNGQIIPVDDVFEFLEVDTSDFVETLYSDYEYEGLHYAAPYARSTPLFY 193 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLIS-WTFQGPNWAF 217 YNK W AGLPDRGP++W E EWGP ++ + A + G + S W + +W Sbjct 194 YNKDVWAAAGLPDRGPETWEELQEWGPAIRAHIPADGAPLGLSIGPSWSGWWYSNISWGL 253 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKG-YAAVANDIANEFATGILASAVASTGSL 276 G SD+WT+TL ++AAGNF HG+ +A D +F GI AS + STGSL Sbjct 254 GAQMSDEWTVTLDSEESLAAGNFVAEMYHGENAFAGFGTDTNADFQAGIFASLIGSTGSL 313 Query 277 AGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNT 336 G A+F+ G A LP GP A P PTGG G+AI + E+++ A F+AF+++ T Sbjct 314 TGHLELAQFELGTAYLPDGPVAGPNVPTGGTGVAIAKDRTPEQQLAAAMFLAFLSDTDRT 373 Query 337 AYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPH-TRTQDYARVFLPGGDRII 395 A FS TGY+PVR SA+D + P+ R ++DQL TRTQD+ RVF PGGD+II Sbjct 374 AEFSSATGYMPVRTSAIDGDVMGALYEETPQFRTSVDQLQEKTRTQDWVRVFTPGGDQII 433 Query 396 SAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 + G+E + L GA+ + ++ +L+ I L Sbjct 434 TDGIEQLVLNGANAEDVWPDVTTKLERAYSENIEPYL 470 >gi|163846846|ref|YP_001634890.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222524667|ref|YP_002569138.1| family 1 extracellular solute-binding protein [Chloroflexus sp. Y-400-fl] gi|163668135|gb|ABY34501.1| extracellular solute-binding protein family 1 [Chloroflexus aurantiacus J-10-fl] gi|222448546|gb|ACM52812.1| extracellular solute-binding protein family 1 [Chloroflexus sp. Y-400-fl] Length=448 Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 183/432 (43%), Positives = 253/432 (59%), Gaps = 19/432 (4%) Query 4 LNRRQFLALAAAAAG--VTAGCAGMGGGGSVKSGSGP-----------IDFWSSHPGQSS 50 L RR+ L L A +G V A C G + +S + P I +W S G Sbjct 5 LTRRELLRLMMAGSGAAVLAACGAQSGQSTGQSPTAPAVVSQPGSTVKITYWGSFSGNLG 64 Query 51 AAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL 110 AE+ ++ F D + V+ G Y+E AQKF AAL PDV+LL D WWF F L Sbjct 65 EAEQAMVKAFNDSQDEVEVEYQFQG-SYEETAQKFTAALQANTTPDVILLSDVWWFGFYL 123 Query 111 SGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP 170 +G +TALDDL QV +D +DY LL + G HY +P+ARSTPLFYYNK W +AGLP Sbjct 124 AGAITALDDLARQVNLDFSDYEPVLLNEGVRKGVHYWIPFARSTPLFYYNKDIWAEAGLP 183 Query 171 DRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAFGGAYSD-KWTLT 228 DR P++W+EF EW P+L + G+ R+A G N A I+W FQG W FGG YS +T+T Sbjct 184 DRAPETWAEFAEWAPKLVKSDGS-RAAFGHPNGASYIAWLFQGVVWQFGGQYSQPDFTMT 242 Query 229 LTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFG 288 +T+P T+ A FY++++ + +A ++ ++ +F G +AS +ASTG+LAGI A+A F G Sbjct 243 MTDPNTLRAAQFYQDTVLKEKWAILSPNLNQDFIGGAIASMMASTGALAGIQATATFPVG 302 Query 289 AAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPV 348 LP + CPTGGAGLAI ++ E+++ A+K+IAF T+ TN +++ TGY+PV Sbjct 303 VGFLPR--ETNFGCPTGGAGLAIVSRAPAEKQLAAMKYIAFATSSTNAGMWARSTGYMPV 360 Query 349 RKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGAD 408 R S + NP + A+DQLP TR QD ARVF+ GD+II GLE I + G Sbjct 361 RISTKQTPEMVEFFNQNPNFKTAVDQLPKTRAQDAARVFVRNGDQIIGKGLERIIVNGET 420 Query 409 VTKTFTNIQKRL 420 + F + L Sbjct 421 PSAVFAEVNNEL 432 >gi|256833456|ref|YP_003162183.1| extracellular solute-binding protein family 1 [Jonesia denitrificans DSM 20603] gi|256686987|gb|ACV09880.1| extracellular solute-binding protein family 1 [Jonesia denitrificans DSM 20603] Length=455 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 175/391 (45%), Positives = 244/391 (63%), Gaps = 19/391 (4%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HPG S AE ELI +F ++ ++VKL+ AG YDEVAQ+F AA +PD+V Sbjct 63 ITWWSNHPGSSKDAEDELIRQFTEK-TGIAVKLVTAGASYDEVAQRFQAASGTDSLPDLV 121 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 + D WWF + L+G + LD +F + VDT+DY +L DYEF+G HYA PYARSTPLFY Sbjct 122 IASDVWWFRYFLNGQIMPLDGVFTHLKVDTSDYNPTLYGDYEFDGAHYAAPYARSTPLFY 181 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRV---------VGAGRSAHGWANADLISWT 209 YNK +++AGLPDRGP++W EF++W P+LQ V +G G S W +++ Sbjct 182 YNKDVFKKAGLPDRGPRTWDEFEQWAPKLQEVLPADGAPLGLGVGTSWSAWWMLNVL--- 238 Query 210 FQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASA 269 W G YS++W +TL P IAAG + R H K +A++ ND +FA G Sbjct 239 -----WGRGATYSNEWDITLNTPEAIAAGEWVRELYHDKKFASIGNDTNADFAAGYFGCL 293 Query 270 VASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAF 329 + STGSL G+ +A F+ GA+ LP GP+ PTGG GLAIP+ S E+++ A F+ F Sbjct 294 IGSTGSLTGLLDAATFNLGASFLPEGPEGP-GVPTGGTGLAIPSSRSPEQQLAAAMFLDF 352 Query 330 VTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLP 389 +TN +TA+FS+ TGY+PVR SA + + P RVA+DQL TR+QD+ RVF+P Sbjct 353 LTNAESTAFFSKSTGYMPVRTSATTGPTMTALYDEIPLYRVAIDQLAITRSQDWVRVFVP 412 Query 390 GGDRIISAGLESIGLRGADVTKTFTNIQKRL 420 GD+I+S G+E I L+ + + +I RL Sbjct 413 SGDQILSEGIEQIVLKNTPAQQAWESITPRL 443 >gi|219849081|ref|YP_002463514.1| family 1 extracellular solute-binding protein [Chloroflexus aggregans DSM 9485] gi|219543340|gb|ACL25078.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length=450 Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 185/432 (43%), Positives = 250/432 (58%), Gaps = 19/432 (4%) Query 4 LNRRQFLALAAAAAG--VTAGCAGMGGGGSVKSGSGP-----------IDFWSSHPGQSS 50 RR+ L L A +G V A C GG ++ P I +W S G Sbjct 7 FTRRELLRLMVAGSGAAVLAACGTQGGQTGTQATQAPAVVSQPGSKVKITYWGSFSGNLG 66 Query 51 AAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL 110 AE+ ++ F + + V+ G Y+E AQKF AAL PDV+LL D WWF F L Sbjct 67 EAEQAMVKAFNEEQDEVEVEYQFQG-SYEETAQKFTAALQANTTPDVILLSDVWWFGFYL 125 Query 111 SGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP 170 +G +TALDDL QV +D DY LL + G HY +P+ARSTPLFYYNK W +AGLP Sbjct 126 AGAITALDDLARQVNLDFNDYEPVLLNEGVRKGVHYWIPFARSTPLFYYNKDIWAEAGLP 185 Query 171 DRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAFGGAYSD-KWTLT 228 DR P++W+EF EW P+L + G+ RSA G N A I+W FQG W FGG YS +T+T Sbjct 186 DRAPETWAEFSEWAPKLVKSDGS-RSAFGHPNGASYIAWLFQGVVWQFGGQYSQPDFTMT 244 Query 229 LTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFG 288 +T+P T+ A FY++++ +A ++ ++ +F G +AS +ASTGSLAGI A+A F G Sbjct 245 MTDPNTLRAAQFYQDTVVKNKWAILSPNLNQDFIGGAIASMMASTGSLAGIQANATFPVG 304 Query 289 AAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPV 348 LP + CPTGGAGLAI ++ E+++ A+K+IAF TNPT+ +S+ TGY+PV Sbjct 305 VGFLPR--ETNFGCPTGGAGLAIVSRAPAEKQLAAMKYIAFATNPTSAGVWSRSTGYMPV 362 Query 349 RKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGAD 408 R S + NP + A+DQLP TR QD ARVF+ GD+II GLE I + G Sbjct 363 RISTKQTPEMIEFFKQNPNFKTAVDQLPKTRAQDAARVFVRNGDQIIGKGLERIIVNGEA 422 Query 409 VTKTFTNIQKRL 420 + F + L Sbjct 423 PSAVFAEVNNEL 434 >gi|297627494|ref|YP_003689257.1| Extracellular solute-binding protein precursor [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923259|emb|CBL57856.1| Extracellular solute-binding protein precursor [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=477 Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 169/400 (43%), Positives = 240/400 (60%), Gaps = 12/400 (3%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I FWS+HPG S +++I F++ ++V L+ AG Y++VAQKF A G +PD+V Sbjct 81 ITFWSNHPGSSEDITKQIISDFKNE-TGITVNLVTAGSSYEDVAQKFQTAQTGGTLPDIV 139 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 + D WWF + + + L + VDT+DY D L ADY++ G +AVP+ARSTPLFY Sbjct 140 VFSDVWWFRYYMQDSIIPLTNALKAANVDTSDYRDGLFADYQYKGSQWAVPWARSTPLFY 199 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGW-ANADLISWTFQGPNWAF 217 YNK+ W AGLPDR P +W EF +W P+L+ + + + A AD WT Q W + Sbjct 200 YNKSHWAAAGLPDRVPATWDEFAQWAPKLKDANSSAQHVYEHPALADYAGWTLQNILWGY 259 Query 218 GGAYSDK--WTLTLTEPATIAAGNFYRNSIHGKGYAAVANDI-ANEFATGILASAVASTG 274 GG +S K + +T A++ A + ++S++ +A VA+ ++ A G ++ + STG Sbjct 260 GGGWSAKGSFDVTCDSEASVKALQYVKDSVYQGKWAGVASSAGTDDLAAGACSATLGSTG 319 Query 275 SLAGI--TASARFDFGAAPLPTGPDA-APACPTGGAGLAIPAKLSEERKVNALKFIAFVT 331 SL G+ A+ +F+ G LP GP P CPTGGAG+ IP K+ ++ A KFI F+T Sbjct 320 SLVGVQKAAAGKFEVGVGNLPGGPSVTTPVCPTGGAGVGIPKKVPAANQLAAAKFIGFLT 379 Query 332 NPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGG 391 NP NT FSQQTGY+PVRKSA D SE LA NP A+ QL TRTQDYARVFLPG Sbjct 380 NPKNTVAFSQQTGYMPVRKSA--DTSE--LLAKNPLIETAIKQLDVTRTQDYARVFLPGA 435 Query 392 DRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRK 431 D+ ++ + I + ADV T +++ L+ I + Q+ K Sbjct 436 DQEMAKSVAQIVTQNADVASTMKSLRSTLEGIYNGQVKSK 475 >gi|334335797|ref|YP_004540949.1| extracellular solute-binding protein family 1 [Isoptericola variabilis 225] gi|334106165|gb|AEG43055.1| extracellular solute-binding protein family 1 [Isoptericola variabilis 225] Length=457 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 173/387 (45%), Positives = 236/387 (61%), Gaps = 4/387 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +WS+HPGQS A E ELI RF+ P +SV L+ AG +YDEVAQ+F AA +PD+V Sbjct 62 ITWWSNHPGQSKAVEEELIARFEAEHPEISVDLVTAGANYDEVAQRFQAASQTDQLPDLV 121 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 + D WWF + L+ + LDD+F + D D+ +L ADYE+ G+H+A PYARSTPLFY Sbjct 122 IASDVWWFRYHLNDQIMPLDDVFEHLDADVDDFQPALYADYEYEGQHWAAPYARSTPLFY 181 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAF 217 YNK WQ AGLPDRGP++W+E +EW L + G S G + +W F+ W Sbjct 182 YNKDLWQAAGLPDRGPETWAELEEWDAALAEHLPEGGSTFGLSTGPSWGAWWFENMIWGH 241 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAV-ANDIANEFATGILASAVASTGSL 276 GG YSD + LTL +A G F + H G A + A+D +F++G++AS + STGSL Sbjct 242 GGQYSDGFELTLDTEEAVAGGQFLHDLFHSSGIATLSADDAMADFSSGLIASTIGSTGSL 301 Query 277 AGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNT 336 G +A F+ G A LP G A PTGG GLAIP+ + E ++ A F+ F+TN NT Sbjct 302 KGALDAASFEVGTAYLPDG-PAGGGTPTGGTGLAIPSSKTPEEQLAAAMFLEFLTNTENT 360 Query 337 AYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLP-HTRTQDYARVFLPGGDRII 395 AYFSQ TGY+PVR SAV+ + A+ P+ R A+DQL R QD RVF+PG D ++ Sbjct 361 AYFSQSTGYMPVRTSAVESETMTATYAETPQFRTAVDQLADKARPQDDVRVFVPGADALL 420 Query 396 SAGLESIGLRGADVTKTFTNIQKRLQV 422 + +E I + G D F +I +++ Sbjct 421 NDAIEQIVIDGTDPRTAFESIAPQIET 447 >gi|257070083|ref|YP_003156338.1| carbohydrate-binding protein [Brachybacterium faecium DSM 4810] gi|256560901|gb|ACU86748.1| carbohydrate-binding protein [Brachybacterium faecium DSM 4810] Length=448 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 165/397 (42%), Positives = 236/397 (60%), Gaps = 12/397 (3%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTD-VPDV 97 IDFW+SHPG S E EL+ F + + V + AG +Y+E+AQ+F A +P V Sbjct 61 IDFWTSHPGGSQEVEAELLAAFTEE-TGIEVTHVTAGSNYEEIAQRFQTAQAANSGLPAV 119 Query 98 VLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLF 157 V+L D WWF + L+G + +D L + +D +DY DSL+ DY++ + +A+PY RSTPLF Sbjct 120 VVLSDVWWFRYYLNGNIIPIDTLVETLEIDLSDYRDSLVEDYQYEDKQWALPYGRSTPLF 179 Query 158 YYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWA 216 YYNK + AGLPDR P++W EF+EW P+L +A+ + + A WT Q W Sbjct 180 YYNKDHFSAAGLPDRAPETWEEFEEWAPKLTE----AETAYMYPDLAGYAGWTLQNVLWG 235 Query 217 FGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVA-NDIANEFATGILASAVASTGS 275 G A+S++W +T P + A + ++S+ G+A VA +D A+ FA G+ ++ +ASTGS Sbjct 236 QGAAWSEEWEITCNSPEAVEALQWVQDSVFANGWAQVASSDSADTFAAGVCSATIASTGS 295 Query 276 LAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTN 335 L G+ SA FD G LP G P CPTGGAGL IPA +S+E ++ I F+ P N Sbjct 296 LVGVLDSATFDVGVGFLPGGSVDGPVCPTGGAGLGIPAAVSKEEQLAGAMLIEFMGRPEN 355 Query 336 TAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRII 395 T FS TGY+PVRKSA D +E P + A+DQL TR QD+ARVFLPG D+ + Sbjct 356 TVSFSAATGYMPVRKSA--DLTE--LTEKTPEIQTAVDQLDVTRPQDFARVFLPGADQEM 411 Query 396 SAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 + + SI DV + +++ L+ I ++I KL Sbjct 412 AEAIASIVTTEGDVQEAMDGLKETLEGIFTKEIEPKL 448 >gi|220913408|ref|YP_002488717.1| family 1 extracellular solute-binding protein [Arthrobacter chlorophenolicus A6] gi|219860286|gb|ACL40628.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] Length=468 Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 176/448 (40%), Positives = 255/448 (57%), Gaps = 24/448 (5%) Query 3 PLNRRQFLALA---------------AAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPG 47 P+ RR FL+LA + +AG A + G + S DFWS+HPG Sbjct 25 PVGRRLFLSLAGAGAGAAALTACGGPSTSAGSEQTTAALDFDGVKPAAS--FDFWSNHPG 82 Query 48 QSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIG-TDVPDVVLLDDRWWF 106 +S E+ +I +F+ + P + V L+ AG +Y+E+AQKF A + +P +V+L D WWF Sbjct 83 KSQDVEKSIIAKFEAKNPGIKVNLVTAGANYEEIAQKFQTAQAAKSGLPALVVLSDVWWF 142 Query 107 HFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQ 166 + L+ + LD L Q+ V D+ SL+ DY+++G+ +A+PY RSTPLFYYNK + Sbjct 143 RYYLNESIIPLDALIKQLDVKLDDFRTSLVDDYKYDGQQWALPYGRSTPLFYYNKDHFAA 202 Query 167 AGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWT 226 AGLPDR P +W EF EW P+L+ GA + A A WT Q W GG +S W Sbjct 203 AGLPDRAPATWQEFAEWAPKLKAATGAQYAFMHPALAGYAGWTLQNNLWGEGGGWSKDWD 262 Query 227 LTLTEPATIAAGNFYRNSIHGKGYAAVAN-DIANEFATGILASAVASTGSLAGITASARF 285 +T P ++AA ++S++ +A V++ + A++FA G+ ++ ++STGSL GI SA F Sbjct 263 ITCDSPESVAALQAVQDSVYKDSWAGVSSKESADDFAAGLASATLSSTGSLIGILKSASF 322 Query 286 DFGAAPLPTGPDAAP-ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTG 344 + G LP G A CPTGGAGL IP+ ++ E ++ A F+ FVT P NTA FS TG Sbjct 323 NVGVGFLPGGSKAKTGVCPTGGAGLGIPSGVTREEQLAAAMFLQFVTEPENTAEFSAATG 382 Query 345 YLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGL 404 Y+P R SA A LA P+ + A+DQL TR QD AR FLPG D+ ++ I Sbjct 383 YMPTRTSADMTA----VLAKTPQIKTAMDQLAVTRVQDNARAFLPGADQEMAKAAAKILT 438 Query 405 RGADVTKTFTNIQKRLQVILDRQIMRKL 432 + ADV T T ++ L+ + + + KL Sbjct 439 QQADVKATMTELKATLEGLYTKDVKPKL 466 >gi|156740138|ref|YP_001430267.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156231466|gb|ABU56249.1| extracellular solute-binding protein family 1 [Roseiflexus castenholzii DSM 13941] Length=455 Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 169/385 (44%), Positives = 226/385 (59%), Gaps = 7/385 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +W S G AE+ + F + V G +Y+E AQK AA+ PDV Sbjct 61 ITYWGSFSGVLGEAEQATVETFNSMQQDVRVNYQFQG-NYEETAQKLTAAVQARQTPDVS 119 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 LL D WWF F ++G L LDDL GV YVD LL + Y +P+ARSTPLFY Sbjct 120 LLSDVWWFSFYINGQLQPLDDLMAAEGVKREAYVDVLLNEGIRKNTVYWIPFARSTPLFY 179 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAF 217 YNK AW +AGL DR P++W EF EW P+L R GRSA A I+W FQG W + Sbjct 180 YNKDAWAEAGLDDRAPKTWEEFMEWAPKLNR---EGRSAFAHPGAASYIAWLFQGVIWQY 236 Query 218 GGAYSD-KWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSL 276 GG YSD +T+ + E I AGNFYR++ +A D+ +F TG+ ASA+ STG+L Sbjct 237 GGRYSDPDFTIRIHEENGIRAGNFYRDTTQTYKWATTPKDVTQDFVTGLSASAMLSTGAL 296 Query 277 AGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNT 336 AG+ +A+F G LP GP C TGGAG+A+ + L E++ A+K+IAF T Sbjct 297 AGVEKNAQFPVGTGFLPEGPSGFGCC-TGGAGMAVLSGLPAEKQQAAMKWIAFATGDEWA 355 Query 337 AYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIIS 396 +SQ+TGY+PVRK+AV+ + YLA+ P R A++QLP TR QD ARV++ GGD+II Sbjct 356 VDWSQRTGYMPVRKAAVESERMKQYLAERPNFRTAVEQLPKTRPQDSARVYVRGGDQIIG 415 Query 397 AGLESIGLRGADVTKTFTNIQKRLQ 421 GLE I + G D K + +++ L+ Sbjct 416 KGLERITIAGEDPAKVWMDVKAELE 440 >gi|119964456|ref|YP_948635.1| secreted sn-glycerol-3-phosphate-binding protein [Arthrobacter aurescens TC1] gi|119951315|gb|ABM10226.1| secreted sn-glycerol-3-phosphate-binding protein [Arthrobacter aurescens TC1] Length=448 Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 165/397 (42%), Positives = 246/397 (62%), Gaps = 7/397 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIG-TDVPDV 97 IDFW++HPG+S E+ +I +F +FP + V L+ AG +Y+E+AQKF + T +P + Sbjct 54 IDFWTNHPGKSQDVEKAIIEKFHAKFPDIKVNLVTAGANYEEIAQKFQTSQAAKTGLPGL 113 Query 98 VLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLF 157 V+L D WWF + +G + +D L Q+ + D+ SL+ DY++ + +A+PY RSTPLF Sbjct 114 VVLSDVWWFRYYSNGSIIPIDGLVKQLDIKIDDFQKSLVDDYKYEDKQWALPYGRSTPLF 173 Query 158 YYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAF 217 YYNK ++ AGLPDR P +W EF EW P+L+ GA + A A WT Q W + Sbjct 174 YYNKDHFKAAGLPDRAPATWQEFAEWAPKLKATSGAQYAYIYPALAGYAGWTLQNNLWGW 233 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVAN-DIANEFATGILASAVASTGSL 276 GG++S W +T P ++AA + ++SI+ G+A V++ + A++FA GI +S ++STGSL Sbjct 234 GGSWSKDWDITCDSPQSVAALQWAQDSIYKDGWAGVSSKEAADDFAAGITSSTISSTGSL 293 Query 277 AGITASARFDFGAAPLPTGPDA-APACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTN 335 G+ +A+F+ G LP GP+A + CPTGGAGL IP+ +S+E ++ A F+ F+T P N Sbjct 294 LGVLKAAKFNVGVGFLPGGPEAPSGVCPTGGAGLGIPSGISKEEQLAAATFLKFMTEPEN 353 Query 336 TAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRII 395 TA FS TGY+P R SA A LA P+ + A+DQL T+ QD ARVFLPG D+ + Sbjct 354 TAAFSAATGYMPTRLSADMSA----VLAATPQIKTAMDQLAATKVQDNARVFLPGADQEM 409 Query 396 SAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 + I + DV T ++K L+ I + + KL Sbjct 410 AKSAAKILTQQGDVQATMNELKKTLEGIYTKDVKPKL 446 >gi|148658642|ref|YP_001278847.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148570752|gb|ABQ92897.1| extracellular solute-binding protein, family 1 [Roseiflexus sp. RS-1] Length=453 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 170/385 (45%), Positives = 225/385 (59%), Gaps = 7/385 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 I +W S G AE+ + F + V G +Y+E AQK AA+ PDV Sbjct 59 ITYWGSFSGVLGEAEQATVEAFNSMQQDVKVNYQFQG-NYEETAQKLTAAVQARQTPDVS 117 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 LL D WWF F ++G L LDDL GV YVD LL + Y +P+ARSTPLFY Sbjct 118 LLSDVWWFSFYINGQLQPLDDLMAAEGVKREAYVDVLLNEGIRKNTVYWIPFARSTPLFY 177 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN-ADLISWTFQGPNWAF 217 YNK AW +AGL DR P++W EF EW P+L + GR+A A I+W FQG W F Sbjct 178 YNKDAWAEAGLEDRAPKTWDEFMEWAPKLNK---EGRAAFAHPGAASYIAWLFQGVIWQF 234 Query 218 GGAYSD-KWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSL 276 GG YSD +T+ + E I AGNFYR++ +A D+ +F TG ASA+ ST +L Sbjct 235 GGRYSDPDFTIRIHEEGGIKAGNFYRDTTQTYKWATTPKDVTQDFVTGQSASAMLSTAAL 294 Query 277 AGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNT 336 AG+ +A+F G LP GP A C TGGAG+AI A L E++ A+K+IAF T T Sbjct 295 AGVEKNAQFPVGTGFLPEGP-AGFGCCTGGAGMAILAGLPAEKQQAAMKWIAFATGEEWT 353 Query 337 AYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIIS 396 ++Q+TGY+PVRK+AV S + Y + P R A++QLP TR QD ARV++ GGD+II Sbjct 354 INWAQRTGYMPVRKAAVQSESMQKYFTERPNFRTAVEQLPKTRPQDSARVYVRGGDQIIG 413 Query 397 AGLESIGLRGADVTKTFTNIQKRLQ 421 GLE I + G D K + +++K L+ Sbjct 414 KGLERITVAGEDPAKVWMDVKKELE 438 >gi|116671494|ref|YP_832427.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116611603|gb|ABK04327.1| carbohydrate ABC transporter substrate-binding protein, CUT1 family [Arthrobacter sp. FB24] Length=448 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 164/397 (42%), Positives = 245/397 (62%), Gaps = 7/397 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTD-VPDV 97 IDFW+SHPG+S E+ +I +F +FP + V L+ AG +Y+E+AQKF + + +P + Sbjct 54 IDFWTSHPGKSQDVEKSIIAKFHAKFPDIKVNLVTAGANYEEIAQKFQTSQAAKEALPGL 113 Query 98 VLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLF 157 V+L D WWF + +G + LD L Q+ + D+ SL+ADY+++ + +A+PY RSTPLF Sbjct 114 VVLSDVWWFRYFTNGNIIPLDGLVKQLDIKVDDFQKSLVADYQYDDKQWALPYGRSTPLF 173 Query 158 YYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAF 217 YYNK ++ AGLPDR P++W EF EW P+L+ GA + A A WT Q W + Sbjct 174 YYNKDHFKAAGLPDRAPKTWQEFAEWAPKLKASSGAQYAYIYPALAGYAGWTLQNNLWGW 233 Query 218 GGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVAN-DIANEFATGILASAVASTGSL 276 GG++S++WT+ ++ A + ++SI+ G+A V++ + A++FA GI +S ++STGSL Sbjct 234 GGSWSNEWTINCDSAESVEALQWAQDSIYKDGWAGVSSKEAADDFAAGITSSTISSTGSL 293 Query 277 AGITASARFDFGAAPLPTGPDAAP-ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTN 335 G+ SA+F+ G LP GP CPTGGAGL IP+ +S+E ++ A F+ F+T P + Sbjct 294 LGVLKSAKFNVGVGFLPGGPKVESGVCPTGGAGLGIPSGVSKEVQLAAGTFLKFMTEPES 353 Query 336 TAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRII 395 TA FS TGY+P R S A LA P+ + A+DQL TR QD ARVFLPG D+ + Sbjct 354 TAEFSAATGYMPTRVS----ADMTSVLAKTPQIKTAMDQLAVTRVQDNARVFLPGADQEM 409 Query 396 SAGLESIGLRGADVTKTFTNIQKRLQVILDRQIMRKL 432 + I + DV T T ++ L+ I + + KL Sbjct 410 AKAAAKILTQQGDVKATMTALKSTLEGIYTKDVKPKL 446 >gi|221635674|ref|YP_002523550.1| extracellular solute-binding protein, family 1 [Thermomicrobium roseum DSM 5159] gi|221157276|gb|ACM06394.1| extracellular solute-binding protein, family 1 [Thermomicrobium roseum DSM 5159] Length=476 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 168/387 (44%), Positives = 229/387 (60%), Gaps = 7/387 (1%) Query 39 IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98 + +W S G AE+ ++ RF + + V G +Y+E AQK AL PD+V Sbjct 78 VVYWGSFSGNLGEAEQGMVKRFNESQKDVVVDYQYQG-NYEETAQKLTQALAAGTTPDIV 136 Query 99 LLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFY 158 LL D WWF F L+ VL LDDLF +DT DYVD L+ + G Y VP+ARSTPLFY Sbjct 137 LLSDVWWFKFYLNDVLLPLDDLFAANKIDTKDYVDPLIEEGTRKGVVYWVPFARSTPLFY 196 Query 159 YNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWAN---ADLISWTFQGPNW 215 YNK WQ+AGLPDRGPQ+W+EF EW P+L + G + + +A+ A I+W FQ W Sbjct 197 YNKQVWQEAGLPDRGPQTWAEFLEWVPKLLKKEGDKTTRYAFAHPSAASYIAWLFQPVVW 256 Query 216 AFGGAYSD-KWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTG 274 GG YSD +T+ + E + AG Y S+ G+A DI +F G A+ +AST Sbjct 257 QHGGRYSDPDFTIRIQEDPAVEAGRLYLASVR-DGWAVPTKDIVADFTNGAAAAMMASTA 315 Query 275 SLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPT 334 SL GI +A F G A LP GP C TGG+GLAI +E + A K++AF T+P Sbjct 316 SLRGILKTATFPVGTAFLPEGPKGFGCC-TGGSGLAILKNKPKEIQEAAFKYLAFATDPE 374 Query 335 NTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRI 394 NT ++SQ TGY+PVRKSA+ +++ +NP + A++QLP TR QD ARV++P GD+I Sbjct 375 NTMWWSQNTGYMPVRKSAIASQEMQNFYKENPNFKTAVEQLPKTRPQDAARVWIPNGDQI 434 Query 395 ISAGLESIGLRGADVTKTFTNIQKRLQ 421 I GLE + ++ D F ++ K L+ Sbjct 435 IGKGLERVTVQQEDPAGVFADVAKTLE 461 >gi|269839323|ref|YP_003324015.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] gi|269791053|gb|ACZ43193.1| extracellular solute-binding protein family 1 [Thermobaculum terrenum ATCC BAA-798] Length=448 Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 165/431 (39%), Positives = 240/431 (56%), Gaps = 17/431 (3%) Query 4 LNRRQFLALAAAAAGVTAGCAGMGGGGSV-----KSGSGP--------IDFWSSHPGQSS 50 +NRRQFLA + AA G A GGG +G+ P + FWS+ G++ Sbjct 5 MNRRQFLATSGAALGSLVVVACGAGGGGGAAQPSSTGTVPPEARNRTRVVFWSAWGGKNG 64 Query 51 AAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFAL 110 A + L+ +F + V+ G Y+E+AQK A+ VPD+V+L + W F L Sbjct 65 EALQTLVNKFNKSQSDIFVENQYQGT-YEELAQKLATAMAAKQVPDLVVLSEVTWNKFYL 123 Query 111 SGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLP 170 + L LDD F Q +D DYVD L+ + G+ + VP+ARSTPLFYYN+ +++AGLP Sbjct 124 NQTLEPLDDYFKQQQLDRDDYVDPLINEGTRQGKTWWVPFARSTPLFYYNRDLFKKAGLP 183 Query 171 DRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDK-WTLTL 229 D+ P++W E E EL+ G + + +W FQG W +GG YSDK + + Sbjct 184 DKAPETWDEVLEAAKELKASAGVKKPYAFTTAKNYNAWHFQGNEWQWGGNYSDKELNILI 243 Query 230 TEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGA 289 + ++ AG + R IH +G +A D + +FA GI A STGSL I +A+F+ G Sbjct 244 DKERSLEAGEWVRKFIHDEGLGYMAEDQSVDFANGICAMTQQSTGSLGEILETAKFEVGT 303 Query 290 APLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVR 349 A LP CPTGG+GL+I A S +RK A +FI F+ P N ++SQQ+GY+PV Sbjct 304 AFLPKHEHFG--CPTGGSGLSIIAASSSDRKQAAFEFIKFLAQPENVVFWSQQSGYMPVT 361 Query 350 KSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADV 409 +SA + + + Y NP+ +VA+DQLP T+ QD AR+F+P GD+ I LE I +R Sbjct 362 ESARESSQMQEYFKQNPQFKVAVDQLPKTQPQDTARLFIPNGDQTIGEALEKIFVRNTPA 421 Query 410 TKTFTNIQKRL 420 + F + +RL Sbjct 422 EQAFKDAAQRL 432 >gi|46204840|ref|ZP_00049406.2| COG1653: ABC-type sugar transport system, periplasmic component [Magnetospirillum magnetotacticum MS-1] Length=438 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 154/354 (44%), Positives = 217/354 (62%), Gaps = 6/354 (1%) Query 57 IGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTA 116 I RF++ ++V L+ AG +YDEVAQ+F AA ++PDVV+ D WWF + L+ + Sbjct 86 IDRFEEE-SGITVNLVTAGANYDEVAQRFQAASQTDELPDVVIASDVWWFRYHLNDQILP 144 Query 117 LDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQS 176 LDD+ V D D+ +L ADYE++ +H+AVPYARSTPLFYYNK W AGLPDRGP++ Sbjct 145 LDDVLEFVDADADDFQPALYADYEYDDQHWAVPYARSTPLFYYNKDLWTAAGLPDRGPET 204 Query 177 WSEFDEWGPELQRVVGAGRSAHGWANA-DLISWTFQGPNWAFGGAYSDKWTLTLTEPATI 235 W+E +EW L+ +V +G S G + +W F+ W GGAYSD + LTL ++ Sbjct 205 WAELEEWDASLKPLVPSGGSTLGLSTGPSWGAWWFENMIWGQGGAYSDGFDLTLDSEESV 264 Query 236 AAGNFYRNSIHGKGYAAV-ANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPT 294 A G F + H KG A + A+D +F++G++AS + STGSL G +A F+ G A LP Sbjct 265 AGGQFLHDLFHEKGVATLSADDAMVDFSSGLIASTIGSTGSLKGALDAASFEVGTAYLPD 324 Query 295 GPDAAPACPTGGAGLAIPAKLSE--ERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSA 352 GPD G +LS+ E+++ A F+AF+TN NTAYFSQ TGY+PVR SA Sbjct 325 GPDGGGTPDRRAPGHQPITRLSKSPEQQLAAAMFLAFLTNTENTAYFSQNTGYMPVRTSA 384 Query 353 VDDASERHYLADNPRARVALDQLP-HTRTQDYARVFLPGGDRIISAGLESIGLR 405 V+ + + P+ R A+DQL R QD ARVF+PG D +++ +E I + Sbjct 385 VESDTMQAIYEATPQFRTAVDQLADKARPQDDARVFIPGADALLNEAIEQIVIE 438 >gi|148273422|ref|YP_001222983.1| putative sugar ABC transporter substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831352|emb|CAN02308.1| putative sugar ABC transporter, substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=459 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 155/435 (36%), Positives = 221/435 (51%), Gaps = 20/435 (4%) Query 3 PLNRRQFLALAAAAAG--VTAGCAGMGGGGSVKSGSGP------------IDFWSSHPGQ 48 P +RR L L A G + A C+G GG + + P I +W++HPGQ Sbjct 16 PFDRRSVLKLGAVLGGTAMLAACSGPSVGGDTAATAAPDTDWDGIQPATDITWWTTHPGQ 75 Query 49 SSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHF 108 +S E + F + ++V ++ G YDE+AQK AA +PD+V D WWF + Sbjct 76 TSDLEAQFAADFLAK-TGITVNVVTGGASYDEIAQKLQAAAGTDSMPDMVNASDTWWFRY 134 Query 109 ALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAG 168 ++ A+D L +G + D+ L DY +NG YAVPYARSTP+FYY+K+ WQ+AG Sbjct 135 MVNKQSIAMDGLMSHLGFEVDDFNKVFLDDYLYNGARYAVPYARSTPIFYYDKSIWQKAG 194 Query 169 LPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLT 228 LPDR P +W+E +EW P + +V G G A + +W W GG YSD W L Sbjct 195 LPDRAPDTWAELEEWAPAIMKVTG-GNPAVRLPQGSIGTWAMSNVLWGRGGQYSDGWDLK 253 Query 229 LTEPATIAAGNFYRNSIHGKGYAAVA---NDIANEFATGILASAVASTGSLAGITASARF 285 L +P T+ A + R + A VA D A +FA G+ +AS G++ +TASA+F Sbjct 254 LDQPETLEAAGYARGLVFDSKIANVAAASGDTAVDFAGGLAPCTIASAGAVGIVTASAKF 313 Query 286 DFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGY 345 G LP GP PTGG GLA+ ++E+++ A FI +T +++TGY Sbjct 314 PIGTGVLPGGPQGQ-FVPTGGTGLAVIGSKTKEQQLAAAMFIKHLTEVDQQVALAKKTGY 372 Query 346 LPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLR 405 P R SA + + A NP R D L H R+QD+AR +P GD + I + Sbjct 373 APSRTSAGESTDLTGFWASNPAFRTVYDSLEHVRSQDWARTLIPNGDTYLQQPWSQILTQ 432 Query 406 GADVTKTFTNIQKRL 420 AD F +L Sbjct 433 DADPAAVFPAAATQL 447 >gi|170782749|ref|YP_001711083.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157319|emb|CAQ02506.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length=438 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 153/422 (37%), Positives = 216/422 (52%), Gaps = 20/422 (4%) Query 9 FLALAAAAAG--VTAGCAGMGGGGSVKSGSGP------------IDFWSSHPGQSSAAER 54 L L A G + A C+G GG + + P I +W++HPGQ+S E Sbjct 1 MLKLGAVLGGTALLAACSGPSVGGDTAATAAPDTDWDGIQPATDITWWTTHPGQTSDLEA 60 Query 55 ELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVL 114 + F + ++V ++ G YDE+AQK AA +PD+V D WWF + ++ Sbjct 61 QFAADFLAK-TGITVNVVTGGASYDEIAQKLQAAAGTDSMPDMVNASDTWWFRYMVNKQS 119 Query 115 TALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGP 174 A+D L +G + D+ L DY +NG YAVPYARSTP+FYY+K+ WQ+AGLPDR P Sbjct 120 IAMDGLMSHLGFELDDFNKVFLDDYLYNGARYAVPYARSTPIFYYDKSIWQKAGLPDRAP 179 Query 175 QSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPAT 234 +W+E +EW P + + G G A + +W W GG YSD W L L +P T Sbjct 180 DTWAELEEWAPTIMKATG-GTPAVRLPQGSIGTWAMSNVLWGRGGQYSDGWDLKLDQPET 238 Query 235 IAAGNFYRNSIHGKGYAAVA---NDIANEFATGILASAVASTGSLAGITASARFDFGAAP 291 + A + R + A VA D A +FA G+ +AS G++ +TASA+F G Sbjct 239 LEAARYARGLVFDSKIANVAAASGDTAVDFAGGLAPCTIASAGAVGIVTASAKFPIGTGV 298 Query 292 LPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKS 351 LP GP PTGG GLA+ ++E+++ A FI VT F+++TGY PVR S Sbjct 299 LPGGPQGR-FVPTGGTGLAVIGSKTKEQQLAAAMFIKHVTEVDQQVAFAKKTGYAPVRTS 357 Query 352 AVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTK 411 A + + A NP R D L H R+QD+AR +P GD + I + AD Sbjct 358 AGQSSDLTGFWASNPAFRTVYDSLEHVRSQDWARTLIPNGDTYLQQPWSQILTQDADPAA 417 Query 412 TF 413 F Sbjct 418 VF 419 >gi|229820000|ref|YP_002881526.1| family 1 extracellular solute-binding protein [Beutenbergia cavernae DSM 12333] gi|229565913|gb|ACQ79764.1| extracellular solute-binding protein family 1 [Beutenbergia cavernae DSM 12333] Length=451 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 151/433 (35%), Positives = 218/433 (51%), Gaps = 22/433 (5%) Query 5 NRRQFLALAAA--AAGVTAGCAGMGGGG----------SVKSG-SGPIDFWSSHPGQSSA 51 +RR FL L AA +A + A CAG G G S SG I WSS G + Sbjct 10 SRRTFLGLGAAGLSAPLLASCAGGGSSGELGSVDLNVPSAFSGREVNIAVWSSMSGNNGE 69 Query 52 AERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALS 111 + L+ +F + + +L G Y+E K AAL VPDV++ D WW F L+ Sbjct 70 VLQGLVTQFNESQEDIYAELQFQGA-YEEAGPKVTAALQAKAVPDVMMFADTWWARFMLN 128 Query 112 GVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPD 171 VL LDD F + Y+ SL + +G Y + Y RSTPLFYYNK + QAGLPD Sbjct 129 DVLEPLDDYFTD-DFNGDAYLPSLFQEGVVDGSTYWLSYGRSTPLFYYNKDQFAQAGLPD 187 Query 172 RGPQSWSEFDEWGPELQ--RVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTL 229 RGP++WSE EW P L +V G + H +++ D W F WAFGG SD + + Sbjct 188 RGPETWSELLEWAPALNAIQVSGKALATHAFSSGD--DWPFMALIWAFGGRISDGLDVQI 245 Query 230 TEPATIAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGA 289 A + AG + ++ + GY +A +F G++A+ V ST SL GI + F+ GA Sbjct 246 DGDAAVEAGTWAQDFVFEHGYGYLAQAPTTDFGAGVVATTVGSTASLRGIYEESDFEVGA 305 Query 290 APLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVR 349 + LP + PTGG G ++ + + +ERK + + F+ P N A ++ TGYLP+ Sbjct 306 SFLPQ--EVTTGVPTGGNGFSMFSGVPDERKQAGFELLTFLGRPDNAAAWTLGTGYLPIV 363 Query 350 KSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGL-ESIGLRGAD 408 ++ ++ LAD+P VA DQL + D R+F+ I G+ E + R D Sbjct 364 TASQEEPELAQVLADDPNFSVAADQLELAQPTDAVRIFVTDSTSTIIGGIQEVLSDRSKD 423 Query 409 VTKTFTNIQKRLQ 421 V TF + +L+ Sbjct 424 VATTFGGVAGQLR 436 Lambda K H 0.318 0.135 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 891316815802 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40