BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2844
Length=162
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609981|ref|NP_217360.1| hypothetical protein Rv2844 [Mycoba... 327 5e-88
gi|116668090|pdb|2IB0|A Chain A, Crystal Structure Of A Conserve... 326 8e-88
gi|289754952|ref|ZP_06514330.1| conserved hypothetical protein [... 325 1e-87
gi|183981902|ref|YP_001850193.1| hypothetical protein MMAR_1889 ... 246 6e-64
gi|240172756|ref|ZP_04751415.1| hypothetical protein MkanA1_2580... 246 9e-64
gi|118617677|ref|YP_906009.1| hypothetical protein MUL_2117 [Myc... 241 3e-62
gi|15827822|ref|NP_302085.1| hypothetical protein ML1561 [Mycoba... 238 2e-61
gi|41409010|ref|NP_961846.1| hypothetical protein MAP2912 [Mycob... 231 3e-59
gi|254819679|ref|ZP_05224680.1| hypothetical protein MintA_07139... 229 1e-58
gi|342858324|ref|ZP_08714979.1| hypothetical protein MCOL_05601 ... 223 7e-57
gi|296171597|ref|ZP_06852837.1| conserved hypothetical protein [... 219 7e-56
gi|289444395|ref|ZP_06434139.1| conserved hypothetical protein [... 217 4e-55
gi|333991208|ref|YP_004523822.1| hypothetical protein JDM601_256... 184 5e-45
gi|108799044|ref|YP_639241.1| hypothetical protein Mmcs_2077 [My... 172 1e-41
gi|118467364|ref|YP_886959.1| hypothetical protein MSMEG_2622 [M... 158 2e-37
gi|120403300|ref|YP_953129.1| hypothetical protein Mvan_2309 [My... 155 1e-36
gi|169630220|ref|YP_001703869.1| hypothetical protein MAB_3138 [... 150 7e-35
gi|145224624|ref|YP_001135302.1| hypothetical protein Mflv_4044 ... 147 6e-34
gi|315444956|ref|YP_004077835.1| hypothetical protein Mspyr1_338... 145 2e-33
gi|111023598|ref|YP_706570.1| hypothetical protein RHA1_ro06639 ... 115 3e-24
gi|226366087|ref|YP_002783870.1| hypothetical protein ROP_66780 ... 112 3e-23
gi|333919287|ref|YP_004492868.1| hypothetical protein AS9A_1619 ... 106 1e-21
gi|229491363|ref|ZP_04385187.1| conserved hypothetical protein [... 103 1e-20
gi|226306114|ref|YP_002766074.1| hypothetical protein RER_26270 ... 100 8e-20
gi|325676665|ref|ZP_08156340.1| hypothetical protein HMPREF0724_... 95.5 2e-18
gi|312139325|ref|YP_004006661.1| hypothetical protein REQ_19110 ... 95.5 2e-18
gi|262202082|ref|YP_003273290.1| hypothetical protein Gbro_2148 ... 89.0 2e-16
gi|343926764|ref|ZP_08766261.1| hypothetical protein GOALK_068_0... 87.8 5e-16
gi|238063377|ref|ZP_04608086.1| hypothetical protein MCAG_04343 ... 87.0 7e-16
gi|54026042|ref|YP_120284.1| hypothetical protein nfa40710 [Noca... 86.3 1e-15
gi|256379835|ref|YP_003103495.1| hypothetical protein Amir_5839 ... 85.9 2e-15
gi|326382936|ref|ZP_08204626.1| hypothetical protein SCNU_08353 ... 82.8 2e-14
gi|159036961|ref|YP_001536214.1| hypothetical protein Sare_1322 ... 80.5 8e-14
gi|284992354|ref|YP_003410908.1| hypothetical protein Gobs_3970 ... 79.3 2e-13
gi|330466357|ref|YP_004404100.1| hypothetical protein VAB18032_1... 78.6 3e-13
gi|134102377|ref|YP_001108038.1| hypothetical protein SACE_5930 ... 77.8 5e-13
gi|258652411|ref|YP_003201567.1| hypothetical protein Namu_2201 ... 77.0 8e-13
gi|317508526|ref|ZP_07966193.1| hypothetical protein HMPREF9336_... 74.7 4e-12
gi|315502520|ref|YP_004081407.1| hypothetical protein ML5_1724 [... 73.9 7e-12
gi|302865963|ref|YP_003834600.1| hypothetical protein Micau_1464... 72.8 2e-11
gi|296394259|ref|YP_003659143.1| hypothetical protein Srot_1852 ... 72.0 2e-11
gi|29829098|ref|NP_823732.1| hypothetical protein SAV_2556 [Stre... 71.6 3e-11
gi|145593913|ref|YP_001158210.1| hypothetical protein Strop_1365... 71.2 4e-11
gi|271963644|ref|YP_003337840.1| hypothetical protein Sros_2112 ... 70.5 8e-11
gi|256396853|ref|YP_003118417.1| hypothetical protein Caci_7752 ... 70.1 1e-10
gi|291298938|ref|YP_003510216.1| hypothetical protein Snas_1416 ... 68.6 3e-10
gi|311898671|dbj|BAJ31079.1| hypothetical protein KSE_53030 [Kit... 68.6 3e-10
gi|257055488|ref|YP_003133320.1| hypothetical protein Svir_14530... 67.8 5e-10
gi|300788187|ref|YP_003768478.1| hypothetical protein AMED_6342 ... 65.9 2e-09
gi|297202729|ref|ZP_06920126.1| conserved hypothetical protein [... 63.9 7e-09
>gi|15609981|ref|NP_217360.1| hypothetical protein Rv2844 [Mycobacterium tuberculosis H37Rv]
gi|15842385|ref|NP_337422.1| hypothetical protein MT2910 [Mycobacterium tuberculosis CDC1551]
gi|31794021|ref|NP_856514.1| hypothetical protein Mb2869 [Mycobacterium bovis AF2122/97]
76 more sequence titles
Length=162
Score = 327 bits (837), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK
Sbjct 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH
Sbjct 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE
Sbjct 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
>gi|116668090|pdb|2IB0|A Chain A, Crystal Structure Of A Conserved Hypothetical Protein,
Rv2844, From Mycobacterium Tuberculosis
gi|116668091|pdb|2IB0|B Chain B, Crystal Structure Of A Conserved Hypothetical Protein,
Rv2844, From Mycobacterium Tuberculosis
Length=170
Score = 326 bits (835), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK
Sbjct 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH
Sbjct 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE
Sbjct 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
>gi|289754952|ref|ZP_06514330.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289695539|gb|EFD62968.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=162
Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/162 (99%), Positives = 162/162 (100%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEPAHGATPKRSPSEGSADNAALCDALAVEH+TIYGYGIVSALSPPGVNFLVADALK
Sbjct 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHSTIYGYGIVSALSPPGVNFLVADALK 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH
Sbjct 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE
Sbjct 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
>gi|183981902|ref|YP_001850193.1| hypothetical protein MMAR_1889 [Mycobacterium marinum M]
gi|183175228|gb|ACC40338.1| conserved hypothetical alanine rich protein [Mycobacterium marinum
M]
Length=162
Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/162 (81%), Positives = 142/162 (88%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEP+ GA PKRSP++ D AALCDALAVEHATIYGYGIVSALSPP VN LV +AL
Sbjct 1 MTSSEPSFGANPKRSPADKDGDTAALCDALAVEHATIYGYGIVSALSPPSVNDLVVEALN 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHR RRDDVI ML++R VTAP+AAAGYQLP VSSAADAARLA RMENDGATAWRAVVE+
Sbjct 61 QHRQRRDDVIAMLTSRKVTAPVAAAGYQLPNVVSSAADAARLAARMENDGATAWRAVVEY 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
A+TA DR FASTALT+SAVMA RW++VLGAWPIT AFPGGDE
Sbjct 121 ADTAGDRAFASTALTQSAVMAARWSKVLGAWPITTAFPGGDE 162
>gi|240172756|ref|ZP_04751415.1| hypothetical protein MkanA1_25802 [Mycobacterium kansasii ATCC
12478]
Length=162
Score = 246 bits (628), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/162 (82%), Positives = 141/162 (88%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEP+ GA+PKRSP+ AD AAL DALAVEHATIYGYGIVSALSPP VN LV +AL
Sbjct 1 MTSSEPSFGASPKRSPAGKDADTAALSDALAVEHATIYGYGIVSALSPPSVNDLVVEALN 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHR RRDDVI ML+AR VTAP AA GYQLP V SAADAARLA RMENDGATAWRAVVEH
Sbjct 61 QHRQRRDDVIAMLAARKVTAPAAAPGYQLPNDVGSAADAARLAARMENDGATAWRAVVEH 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
AETADDR FASTALT+SAVMA RWN+VLGAWPITA+FPGG+E
Sbjct 121 AETADDRAFASTALTQSAVMAARWNKVLGAWPITASFPGGNE 162
>gi|118617677|ref|YP_906009.1| hypothetical protein MUL_2117 [Mycobacterium ulcerans Agy99]
gi|118569787|gb|ABL04538.1| conserved hypothetical alanine rich protein [Mycobacterium ulcerans
Agy99]
Length=162
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/162 (80%), Positives = 140/162 (87%), Gaps = 0/162 (0%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTSSEP+ GA PKRSP++ D AALCDALAVEHATIYGYGIVSALSPP VN LV +AL
Sbjct 1 MTSSEPSFGANPKRSPADKDGDTAALCDALAVEHATIYGYGIVSALSPPSVNDLVVEALN 60
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
QHR RRDDVI ML++R VTAP+AAAGYQLP VSSAADAARLA RMENDGATAWRAVVE+
Sbjct 61 QHRQRRDDVIAMLTSRKVTAPVAAAGYQLPNVVSSAADAARLAARMENDGATAWRAVVEY 120
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
A+TA DR FASTALT+SAVMA RW++VLGAWPIT A PGG E
Sbjct 121 ADTAGDRAFASTALTQSAVMAARWSKVLGAWPITTALPGGGE 162
>gi|15827822|ref|NP_302085.1| hypothetical protein ML1561 [Mycobacterium leprae TN]
gi|221230299|ref|YP_002503715.1| hypothetical protein MLBr_01561 [Mycobacterium leprae Br4923]
gi|4455673|emb|CAB36565.1| hypothetical protein MLCB596.09c [Mycobacterium leprae]
gi|13093374|emb|CAC30512.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933406|emb|CAR71656.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=165
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/165 (72%), Positives = 133/165 (81%), Gaps = 3/165 (1%)
Query 1 MTSSEPAHG---ATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVAD 57
MTS EP+ ATPKR+P +DNA L +AL VEH+TIYGYGIV ALSPP N LV D
Sbjct 1 MTSIEPSAPTPVATPKRTPVSQDSDNAGLSEALVVEHSTIYGYGIVLALSPPNANSLVVD 60
Query 58 ALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAV 117
AL QHR RRDD+IVML+AR V+ P+AA+GYQLPM V SAADAARLAVRMENDGATAWRAV
Sbjct 61 ALIQHRQRRDDIIVMLTARRVSPPVAASGYQLPMLVGSAADAARLAVRMENDGATAWRAV 120
Query 118 VEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
EHAETADDR FA+ AL +SAVMA RWN++LGAWPIT FPG +E
Sbjct 121 AEHAETADDRTFAAMALAQSAVMAARWNKMLGAWPITTTFPGSNE 165
>gi|41409010|ref|NP_961846.1| hypothetical protein MAP2912 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464435|ref|YP_882876.1| hypothetical protein MAV_3699 [Mycobacterium avium 104]
gi|254776129|ref|ZP_05217645.1| hypothetical protein MaviaA2_15855 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41397369|gb|AAS05229.1| hypothetical protein MAP_2912 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165722|gb|ABK66619.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458992|gb|EGO37944.1| hypothetical protein MAPs_07590 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=148
Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/146 (77%), Positives = 125/146 (86%), Gaps = 0/146 (0%)
Query 17 SEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSAR 76
S ADNAALCDALA+EH+TIYGYGIVSA+SPP VN +V +AL+QHR RRDDVI ML+AR
Sbjct 3 SGKDADNAALCDALAIEHSTIYGYGIVSAMSPPSVNDMVVEALEQHRQRRDDVIAMLTAR 62
Query 77 GVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTE 136
VTAP+AAAGYQLP+ V S ADAARLA RMENDGA AWR V EHAET DDR FA+TAL +
Sbjct 63 KVTAPVAAAGYQLPLVVGSPADAARLAARMENDGAGAWRVVAEHAETGDDRAFAATALVQ 122
Query 137 SAVMATRWNRVLGAWPITAAFPGGDE 162
SAVMA RWNRVLGAWPIT +FPGG++
Sbjct 123 SAVMAARWNRVLGAWPITTSFPGGND 148
>gi|254819679|ref|ZP_05224680.1| hypothetical protein MintA_07139 [Mycobacterium intracellulare
ATCC 13950]
Length=148
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/142 (78%), Positives = 124/142 (88%), Gaps = 0/142 (0%)
Query 21 ADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTA 80
ADNAAL DALA+EH+TIYGYGIVSA+SPP VN +V +AL+QHR RRDDVI ML+AR VTA
Sbjct 7 ADNAALSDALAIEHSTIYGYGIVSAMSPPSVNGMVVEALEQHRQRRDDVIAMLTARKVTA 66
Query 81 PIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVM 140
P+AAAGYQLP+ V S ADAARLA RMENDGA AWR V EHAETA+DR FASTAL +SAVM
Sbjct 67 PVAAAGYQLPLVVGSPADAARLAARMENDGAGAWRVVAEHAETAEDRAFASTALVQSAVM 126
Query 141 ATRWNRVLGAWPITAAFPGGDE 162
A RWNRVLGAWPIT +FPGG++
Sbjct 127 AARWNRVLGAWPITTSFPGGND 148
>gi|342858324|ref|ZP_08714979.1| hypothetical protein MCOL_05601 [Mycobacterium colombiense CECT
3035]
gi|342134028|gb|EGT87208.1| hypothetical protein MCOL_05601 [Mycobacterium colombiense CECT
3035]
Length=148
Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/146 (75%), Positives = 121/146 (83%), Gaps = 0/146 (0%)
Query 17 SEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSAR 76
S ADN ALCDALA+EH+TIYGYGIVSALSPP VN +V +AL QHR RRDDVI ML+AR
Sbjct 3 SGKDADNQALCDALAIEHSTIYGYGIVSALSPPSVNDMVVEALAQHRQRRDDVIAMLTAR 62
Query 77 GVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTE 136
VTAPIAAAGYQLP+ V ADAARLA RMENDGA AWR V EHAET DR FA+TAL +
Sbjct 63 KVTAPIAAAGYQLPLVVGGPADAARLAARMENDGAGAWRVVAEHAETGADRAFAATALVQ 122
Query 137 SAVMATRWNRVLGAWPITAAFPGGDE 162
SAVMA RW+RVLGAWPIT +FPGG++
Sbjct 123 SAVMAARWSRVLGAWPITTSFPGGND 148
>gi|296171597|ref|ZP_06852837.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894052|gb|EFG73814.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=148
Score = 219 bits (559), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/146 (79%), Positives = 127/146 (87%), Gaps = 0/146 (0%)
Query 17 SEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSAR 76
S ADNAALCDALAVEH+TIYGYG+VSALSPP VN LV +AL QHR RRDDVI ML+AR
Sbjct 3 SGKDADNAALCDALAVEHSTIYGYGMVSALSPPSVNDLVVEALNQHRQRRDDVIAMLTAR 62
Query 77 GVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTE 136
V AP+AA GYQLPM V SAADAARLA RMENDGA+AWR V+EHAETADDR FA+TALT+
Sbjct 63 KVNAPVAAPGYQLPMLVGSAADAARLAARMENDGASAWRVVIEHAETADDRAFAATALTQ 122
Query 137 SAVMATRWNRVLGAWPITAAFPGGDE 162
SAVMA RWNR+LGAWPIT +FPGG++
Sbjct 123 SAVMAARWNRILGAWPITTSFPGGND 148
>gi|289444395|ref|ZP_06434139.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417314|gb|EFD14554.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=109
Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/109 (99%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 54 LVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATA 113
+VADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATA
Sbjct 1 MVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATA 60
Query 114 WRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
WRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE
Sbjct 61 WRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 109
>gi|333991208|ref|YP_004523822.1| hypothetical protein JDM601_2568 [Mycobacterium sp. JDM601]
gi|333487176|gb|AEF36568.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=152
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/147 (63%), Positives = 108/147 (74%), Gaps = 0/147 (0%)
Query 16 PSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSA 75
PS SA +AALCDALA E+ +YGYG+VSA S P +N LV ++QHR RRD I ML+A
Sbjct 6 PSPLSAPDAALCDALATEYGVVYGYGMVSAYSLPELNDLVVPTIRQHRERRDRTIAMLTA 65
Query 76 RGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALT 135
R V P AAGYQLPM ++++ DA RLAVRMEND ATAWRAVVE A DR FA+TAL
Sbjct 66 RSVPVPQPAAGYQLPMPLTTSDDALRLAVRMENDTATAWRAVVEQAREPADREFAATALG 125
Query 136 ESAVMATRWNRVLGAWPITAAFPGGDE 162
+SAV+A WNR LG WPIT AFPGG +
Sbjct 126 QSAVLAAHWNRALGNWPITRAFPGGQD 152
>gi|108799044|ref|YP_639241.1| hypothetical protein Mmcs_2077 [Mycobacterium sp. MCS]
gi|119868159|ref|YP_938111.1| hypothetical protein Mkms_2123 [Mycobacterium sp. KMS]
gi|126434647|ref|YP_001070338.1| hypothetical protein Mjls_2060 [Mycobacterium sp. JLS]
gi|108769463|gb|ABG08185.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
MCS]
gi|119694248|gb|ABL91321.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
KMS]
gi|126234447|gb|ABN97847.1| conserved hypothetical alanine rich protein [Mycobacterium sp.
JLS]
Length=156
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/162 (59%), Positives = 114/162 (71%), Gaps = 6/162 (3%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTS EP TP P++ SAD A L DA+A EHA IYGYG+VSA S P VN+LV+ ++
Sbjct 1 MTSVEP----TPPARPAD-SADGA-LYDAIATEHAAIYGYGLVSAHSTPEVNWLVSASIA 54
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
+HR RR+ I +L R V AP+ AAGYQ+PM+V DAA+LAVRME DGA AWRAVVE
Sbjct 55 EHRERREAAIALLEQRQVAAPLPAAGYQVPMRVDDPRDAAKLAVRMEEDGAAAWRAVVEQ 114
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
A +DR F TALTESAV A RW ++ G P+T AFPGG+E
Sbjct 115 ATGTEDRTFGLTALTESAVAAARWTQIAGTDPVTVAFPGGNE 156
>gi|118467364|ref|YP_886959.1| hypothetical protein MSMEG_2622 [Mycobacterium smegmatis str.
MC2 155]
gi|118168651|gb|ABK69547.1| conserved hypothetical alanine rich protein [Mycobacterium smegmatis
str. MC2 155]
Length=157
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/162 (58%), Positives = 109/162 (68%), Gaps = 5/162 (3%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MTS EP G P R A +AAL DA+A EH IYGYG+VSA S P N LVA A+
Sbjct 1 MTSPEPTTG--PARP---TDAADAALFDAVATEHGIIYGYGLVSAHSSPEENSLVAAAMA 55
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
+HR RR+ I ML R VT P+ AAGY+LP +VS DAA LAVRME D A AWRAV+E
Sbjct 56 EHRARREAAIEMLEGRSVTPPLPAAGYRLPSEVSDPVDAANLAVRMEQDAAVAWRAVLEQ 115
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
A T++DR FA TALTESAV A +W++ L WP+T FPGG E
Sbjct 116 ATTSEDRTFAVTALTESAVTAAKWSKFLDVWPVTVPFPGGAE 157
>gi|120403300|ref|YP_953129.1| hypothetical protein Mvan_2309 [Mycobacterium vanbaalenii PYR-1]
gi|119956118|gb|ABM13123.1| conserved hypothetical alanine rich protein [Mycobacterium vanbaalenii
PYR-1]
Length=156
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/140 (58%), Positives = 98/140 (70%), Gaps = 0/140 (0%)
Query 23 NAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPI 82
+ AL DA+A EHATIYGYG+VSA S P VN+LV++A+ +HR RR+ I +L+ +G AP+
Sbjct 17 DGALFDAIATEHATIYGYGLVSAHSTPDVNYLVSEAMAEHRARREAAIALLAEQGAEAPL 76
Query 83 AAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMAT 142
AAGYQLPM+V + A+A LAVRME D A AWRAVVE A R F TALTE A+ A
Sbjct 77 PAAGYQLPMEVDTPAEAVDLAVRMEEDAAVAWRAVVEQAADQAVRAFGVTALTECALTAA 136
Query 143 RWNRVLGAWPITAAFPGGDE 162
RW V G +T AFPGG E
Sbjct 137 RWRAVRGDSTVTVAFPGGSE 156
>gi|169630220|ref|YP_001703869.1| hypothetical protein MAB_3138 [Mycobacterium abscessus ATCC 19977]
gi|169242187|emb|CAM63215.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=157
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/162 (52%), Positives = 107/162 (67%), Gaps = 7/162 (4%)
Query 1 MTSSEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALK 60
MT++EP TP+ + SAD+ AL +ALA EHA IY YG+VSA S P N+LV + L
Sbjct 1 MTTTEP----TPQPA---SSADDTALANALANEHAAIYSYGLVSAHSVPDNNWLVTECLV 53
Query 61 QHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEH 120
+HR R++ I L R VTAP+AAAGY++P VS+ ADA +LA+++E D A WRAV E
Sbjct 54 EHRQCREECIATLRGRSVTAPVAAAGYKVPFPVSTPADAIKLALQVETDTAACWRAVAEQ 113
Query 121 AETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
A++ADDR FA LTESA+ A RW P + AFPGG E
Sbjct 114 ADSADDRRFAVRMLTESAIRAARWRVAGDIAPASVAFPGGTE 155
>gi|145224624|ref|YP_001135302.1| hypothetical protein Mflv_4044 [Mycobacterium gilvum PYR-GCK]
gi|145217110|gb|ABP46514.1| hypothetical protein Mflv_4044 [Mycobacterium gilvum PYR-GCK]
Length=161
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/164 (52%), Positives = 103/164 (63%), Gaps = 5/164 (3%)
Query 1 MTSSEPA--HGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADA 58
MTS PA A P R P + +A AL DALA EHATIYGYG+VSA S P +N+LV+ A
Sbjct 1 MTSPTPAPTDAALPTR-PEDAAA--GALFDALAAEHATIYGYGVVSAHSTPELNYLVSAA 57
Query 59 LKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVV 118
+ +HR RR+ I + +GV + AGYQ+P +V + ADA LAV+ME D A AWRAVV
Sbjct 58 IAEHRARREAAIALCEQQGVDPAVPEAGYQMPFEVDTPADATNLAVQMEEDAAEAWRAVV 117
Query 119 EHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
E A R F TALTE AV A +W V G +T AFPGG E
Sbjct 118 EQATDPGVRAFGVTALTECAVTAAQWRAVRGDTTVTVAFPGGSE 161
>gi|315444956|ref|YP_004077835.1| hypothetical protein Mspyr1_33890 [Mycobacterium sp. Spyr1]
gi|315263259|gb|ADU00001.1| hypothetical protein Mspyr1_33890 [Mycobacterium sp. Spyr1]
Length=161
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/164 (52%), Positives = 102/164 (63%), Gaps = 5/164 (3%)
Query 1 MTS--SEPAHGATPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADA 58
MTS S P P R P + +A AL DALA EHATIYGYG+VSA S P +N+LV+ A
Sbjct 1 MTSPTSAPTDALLPTR-PEDAAA--GALFDALAAEHATIYGYGVVSAHSTPELNYLVSAA 57
Query 59 LKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVV 118
+ +HR RR+ I + +GV + AGYQ+P +V + ADA LAV+ME D A AWRAVV
Sbjct 58 IAEHRARREAAIALCEQQGVDPAVPEAGYQMPFEVDTPADATNLAVQMEEDAAEAWRAVV 117
Query 119 EHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFPGGDE 162
E A R F TALTE AV A +W V G +T AFPGG E
Sbjct 118 EQATDPGVRAFGVTALTECAVTAAQWRAVRGDTTVTVAFPGGSE 161
>gi|111023598|ref|YP_706570.1| hypothetical protein RHA1_ro06639 [Rhodococcus jostii RHA1]
gi|110823128|gb|ABG98412.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=147
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/146 (49%), Positives = 90/146 (62%), Gaps = 2/146 (1%)
Query 15 SPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLS 74
+P+E A+ +L DAL EH+ ++ YG+V+A S P VA A HR RRD ++ L+
Sbjct 3 TPTE--AEGKSLADALTAEHSAVFAYGVVAAFSNPTRATQVATAAAAHRARRDGLLDTLT 60
Query 75 ARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTAL 134
A G+TAP A AGY LP V+ AA+LA ++E D A AWRAVVEH ET D R TAL
Sbjct 61 AAGLTAPAAEAGYTLPFPVTDPITAAQLAAQVEADTAVAWRAVVEHGETEDTRTLGVTAL 120
Query 135 TESAVMATRWNRVLGAWPITAAFPGG 160
TE+AV W LG P+T FPGG
Sbjct 121 TEAAVREATWRVALGTDPVTDPFPGG 146
>gi|226366087|ref|YP_002783870.1| hypothetical protein ROP_66780 [Rhodococcus opacus B4]
gi|226244577|dbj|BAH54925.1| hypothetical protein [Rhodococcus opacus B4]
Length=147
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/145 (49%), Positives = 92/145 (64%), Gaps = 2/145 (1%)
Query 15 SPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLS 74
+P+E ++ +L DALA EH+ ++ YG+V+A S P VA A HR RRD+++ L+
Sbjct 3 TPTE--VESRSLGDALAAEHSAVFAYGVVAAFSNPTRAAQVATAAAAHRARRDELLDTLT 60
Query 75 ARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTAL 134
A G+TAP A AGY LP V+ AA+LA ++E D A AWRAVVEH ETAD R TAL
Sbjct 61 AAGLTAPAAEAGYTLPFPVTDPITAAQLAAQVEADTAVAWRAVVEHGETADTRTLGVTAL 120
Query 135 TESAVMATRWNRVLGAWPITAAFPG 159
T++AV W LG P+T FPG
Sbjct 121 TDAAVREATWRVALGTDPVTDPFPG 145
>gi|333919287|ref|YP_004492868.1| hypothetical protein AS9A_1619 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481508|gb|AEF40068.1| Conserved hypothetical alanine rich protein [Amycolicicoccus
subflavus DQS3-9A1]
Length=319
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/131 (47%), Positives = 75/131 (58%), Gaps = 0/131 (0%)
Query 29 ALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQ 88
AL EHA ++ YG+V+A S P A ++HR RRD V +L+ AP+AA Y
Sbjct 186 ALEREHAAVFSYGVVAAFSLPERRAFTAAGAEEHRARRDAVSGLLARAFGEAPLAAPAYD 245
Query 89 LPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVL 148
LP+ V S AA LAV E + A AWRAV E AE+AD R F ALTE A+ W VL
Sbjct 246 LPLDVDSPVTAAELAVSAEQECAAAWRAVTERAESADLREFGVGALTECALRTALWRGVL 305
Query 149 GAWPITAAFPG 159
GA P+ FPG
Sbjct 306 GAAPVPDPFPG 316
>gi|229491363|ref|ZP_04385187.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321648|gb|EEN87445.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=151
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/139 (41%), Positives = 82/139 (59%), Gaps = 0/139 (0%)
Query 21 ADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTA 80
++++AL A+ E+A I+ YG+V+A S P VA HR RRD ++ + + GVT
Sbjct 9 SESSALLTAIESENAAIFAYGVVAAFSNPARVNEVATHTAAHRARRDALVALSTDAGVTP 68
Query 81 PIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVM 140
P AAA Y++P V+ A AA+LA ++E+D A +RA VE +T R F LT++A+
Sbjct 69 PTAAAAYEIPFPVTDAVTAAQLAAQIESDTAVTYRAFVEQVDTDQLRTFGIDGLTDAAIR 128
Query 141 ATRWNRVLGAWPITAAFPG 159
W LG P T+AFPG
Sbjct 129 GAGWRSALGTAPATSAFPG 147
>gi|226306114|ref|YP_002766074.1| hypothetical protein RER_26270 [Rhodococcus erythropolis PR4]
gi|226185231|dbj|BAH33335.1| hypothetical protein RER_26270 [Rhodococcus erythropolis PR4]
Length=151
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/138 (40%), Positives = 80/138 (58%), Gaps = 0/138 (0%)
Query 22 DNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAP 81
+++AL A+ E+A I+ YG+V+A S P VA HR RRD ++ + + G T P
Sbjct 10 ESSALLTAIESENAAIFAYGVVAAFSNPARVNEVATHTAAHRARRDALVALSTDAGETPP 69
Query 82 IAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMA 141
AAA Y++P V+ A AA+LA ++E+D A +RA VE +T R F LT++A+
Sbjct 70 TAAAAYEIPFPVTDAVTAAQLAAQIESDTAVTYRAFVEQVDTDQLRTFGIDGLTDAAIRG 129
Query 142 TRWNRVLGAWPITAAFPG 159
W LG P T+AFPG
Sbjct 130 AGWRSALGTAPATSAFPG 147
>gi|325676665|ref|ZP_08156340.1| hypothetical protein HMPREF0724_14123 [Rhodococcus equi ATCC
33707]
gi|325552520|gb|EGD22207.1| hypothetical protein HMPREF0724_14123 [Rhodococcus equi ATCC
33707]
Length=148
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/138 (45%), Positives = 78/138 (57%), Gaps = 0/138 (0%)
Query 22 DNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAP 81
+ AL DAL E+A ++ YGIV+A S LVA HR RRD + L+A V AP
Sbjct 9 EQQALLDALQAEYAAVFAYGIVAAFSNTNRTDLVAANTAAHRARRDATLDALAAADVDAP 68
Query 82 IAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMA 141
AGY +P V+ AA+LA ++E D A AW +VVE + + R TALTE+AV A
Sbjct 69 EPEAGYTIPFAVTDPVSAAQLAAQVETDTAAAWLSVVERSRSEHTREVGVTALTEAAVRA 128
Query 142 TRWNRVLGAWPITAAFPG 159
W +LG P T AFPG
Sbjct 129 ANWRAILGEVPATTAFPG 146
>gi|312139325|ref|YP_004006661.1| hypothetical protein REQ_19110 [Rhodococcus equi 103S]
gi|311888664|emb|CBH47976.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=148
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/138 (45%), Positives = 78/138 (57%), Gaps = 0/138 (0%)
Query 22 DNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAP 81
+ AL DAL E+A ++ YGIV+A S LVA HR RRD + L+A V AP
Sbjct 9 EQQALLDALQAEYAAVFAYGIVAAFSNTNRTDLVAANTAAHRARRDATLDALAAADVDAP 68
Query 82 IAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMA 141
AGY +P V+ AA+LA ++E D A AW +VVE + + R TALTE+AV A
Sbjct 69 EPEAGYTIPFAVTDPVSAAQLAAQVETDTAAAWLSVVERSRSEHTREVGVTALTEAAVRA 128
Query 142 TRWNRVLGAWPITAAFPG 159
W +LG P T AFPG
Sbjct 129 ANWRAILGEAPATTAFPG 146
>gi|262202082|ref|YP_003273290.1| hypothetical protein Gbro_2148 [Gordonia bronchialis DSM 43247]
gi|262085429|gb|ACY21397.1| hypothetical protein Gbro_2148 [Gordonia bronchialis DSM 43247]
Length=145
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/143 (40%), Positives = 77/143 (54%), Gaps = 3/143 (2%)
Query 17 SEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSAR 76
SE S A+ DA E+A I+ YG++SA +AD L HR RRD++ + A
Sbjct 2 SETSDARNAVADA---ENAAIFTYGVISAYVSAARRSTIADQLAAHRARRDEINAAIVAA 58
Query 77 GVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTE 136
G T P AAAGY LP+ V+ +AR A+ E D A A+R+++E ++A R LTE
Sbjct 59 GDTPPPAAAGYTLPVNVTDPVSSARAALAAETDCAVAYRSLIERGDSAALRGTGVDGLTE 118
Query 137 SAVMATRWNRVLGAWPITAAFPG 159
SA W L P+T AFPG
Sbjct 119 SAGRIAYWRAALNMSPVTLAFPG 141
>gi|343926764|ref|ZP_08766261.1| hypothetical protein GOALK_068_00450 [Gordonia alkanivorans NBRC
16433]
gi|343763363|dbj|GAA13187.1| hypothetical protein GOALK_068_00450 [Gordonia alkanivorans NBRC
16433]
Length=154
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/127 (41%), Positives = 75/127 (60%), Gaps = 0/127 (0%)
Query 33 EHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQ 92
E+A I+ YG+++A +V D +HR RRD++ ++A G T+P+AAAGY LP+Q
Sbjct 23 ENAAIFTYGVITAFVTAARRRMVGDYAAEHRARRDEIDRAITAAGGTSPLAAAGYTLPVQ 82
Query 93 VSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWP 152
V+ AAR A+ E D TA+RA++E A+ R L++ AV A W +L P
Sbjct 83 VTDPETAARAALAAEIDCTTAYRALLEQADDEAGRRIGVDGLSDCAVRAATWRALLQETP 142
Query 153 ITAAFPG 159
+T AFPG
Sbjct 143 VTVAFPG 149
>gi|238063377|ref|ZP_04608086.1| hypothetical protein MCAG_04343 [Micromonospora sp. ATCC 39149]
gi|237885188|gb|EEP74016.1| hypothetical protein MCAG_04343 [Micromonospora sp. ATCC 39149]
Length=149
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/124 (42%), Positives = 64/124 (52%), Gaps = 3/124 (2%)
Query 37 IYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA 96
++ YG++ A HR RRD +++ LS G P AGY LP V+ A
Sbjct 25 VFAYGVIGVRLADAARTAARRAETAHRSRRDALVLQLSEAGSAVPADKAGYTLPFPVTDA 84
Query 97 ADAARLAVRMENDGATAWRAVVEHAETAD-DRVFASTALTESAVMATRWNRVLGAWPITA 155
A A RLAV +E A WR + H AD DR A ALT+ AV ATRW R G P+T
Sbjct 85 ATALRLAVEVEERTAAFWRVALPHTTGADRDRALA--ALTDCAVRATRWRRTAGVTPVTV 142
Query 156 AFPG 159
AFPG
Sbjct 143 AFPG 146
>gi|54026042|ref|YP_120284.1| hypothetical protein nfa40710 [Nocardia farcinica IFM 10152]
gi|54017550|dbj|BAD58920.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=142
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/129 (40%), Positives = 67/129 (52%), Gaps = 0/129 (0%)
Query 21 ADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTA 80
A+ AL DAL E+A +Y YG+++A + P L+A+ HR RRD L A G
Sbjct 4 AERQALLDALRAEYAAVYAYGVIAAYASPERAGLIAEHTAAHRARRDATADALRAAGADV 63
Query 81 PIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVM 140
P A Y +P V AARLA +E D AWRAVVE ++ R ALTE+A+
Sbjct 64 PSPDAAYGVPFPVQDPVAAARLAETVETDATVAWRAVVEQGDSEATRRLGVEALTEAALR 123
Query 141 ATRWNRVLG 149
W +LG
Sbjct 124 LAAWQAILG 132
>gi|256379835|ref|YP_003103495.1| hypothetical protein Amir_5839 [Actinosynnema mirum DSM 43827]
gi|255924138|gb|ACU39649.1| hypothetical protein Amir_5839 [Actinosynnema mirum DSM 43827]
Length=146
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/130 (42%), Positives = 65/130 (50%), Gaps = 0/130 (0%)
Query 30 LAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQL 89
L EHA ++ YG+VSA P +VA+ HR RRD L G AAA Y
Sbjct 14 LGAEHAAVWTYGLVSAFLPKAQEAVVAEGANAHRARRDTTERWLRDAGQQPKPAAAAYLP 73
Query 90 PMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLG 149
P V AA + V +E D AWR V+E + R A TALTESAV TRW R G
Sbjct 74 PEGVQDAASSIAALVAVEADCCAAWRGVLERTDDNALRTTALTALTESAVRGTRWRRAAG 133
Query 150 AWPITAAFPG 159
P++ A PG
Sbjct 134 LTPVSIALPG 143
>gi|326382936|ref|ZP_08204626.1| hypothetical protein SCNU_08353 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198526|gb|EGD55710.1| hypothetical protein SCNU_08353 [Gordonia neofelifaecis NRRL
B-59395]
Length=141
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/139 (37%), Positives = 79/139 (57%), Gaps = 0/139 (0%)
Query 21 ADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTA 80
+ N AL A E+ ++ YG+++A + V VA+ + HR RRD + L A G
Sbjct 2 SQNTALDAAADAENTAVFTYGVITAFTAGDVRNTVAEYIAAHRVRRDQLNEALLAAGQPE 61
Query 81 PIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVM 140
AAGY LP++V+ A +A+ A+ END A+RA++E AE++ R A LT+ A+
Sbjct 62 RTPAAGYTLPIEVTDEASSAKAALAAENDCEHAYRALLEQAESSPVRRIAVDGLTDCALR 121
Query 141 ATRWNRVLGAWPITAAFPG 159
++ W + G P+T AFPG
Sbjct 122 SSYWRGIAGQKPLTVAFPG 140
>gi|159036961|ref|YP_001536214.1| hypothetical protein Sare_1322 [Salinispora arenicola CNS-205]
gi|157915796|gb|ABV97223.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length=149
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 64/125 (52%), Gaps = 1/125 (0%)
Query 37 IYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA 96
I+ YG + DA HR RRDD+++ LS G P AGY LP V+
Sbjct 25 IWAYGPIGVRLTGPARQAARDAEAAHRRRRDDLVLHLSGAGGDLPADQAGYTLPFPVTDQ 84
Query 97 ADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAA 156
+ A RLAV +E+ A WRA V A + +R A AL + A+ ATRW R G P+T
Sbjct 85 SSALRLAVEIEDRTAGFWRAAVA-ATSGAERERALAALVDCAIRATRWRRTAGTTPLTVP 143
Query 157 FPGGD 161
FPG D
Sbjct 144 FPGRD 148
>gi|284992354|ref|YP_003410908.1| hypothetical protein Gobs_3970 [Geodermatophilus obscurus DSM
43160]
gi|284065599|gb|ADB76537.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=150
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/142 (39%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query 18 EGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARG 77
EG+ + AAL + +A EHA ++GYG V A P A A HR RD ++ +L +RG
Sbjct 9 EGT-ETAALNEVVAAEHAAVWGYGAVGAALPGDARGPAAAAEVAHRDARDRLVALLESRG 67
Query 78 VTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTES 137
AGY LP V S DAA LAV +E + AW V++ A R A L +
Sbjct 68 ADPAPREAGYTLPFPVLSEVDAATLAVALEEGVSAAWVRVLDQAAEPAVRELAVGELGAA 127
Query 138 AVMATRWNRVLGAWPITAAFPG 159
V A W G P+T AFPG
Sbjct 128 EVRAVGWRAAAGRIPVTDAFPG 149
>gi|330466357|ref|YP_004404100.1| hypothetical protein VAB18032_11930 [Verrucosispora maris AB-18-032]
gi|328809328|gb|AEB43500.1| hypothetical protein VAB18032_11930 [Verrucosispora maris AB-18-032]
Length=146
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/123 (43%), Positives = 63/123 (52%), Gaps = 1/123 (0%)
Query 37 IYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA 96
I+ YG + +A HR RRD +I+ LS G P GY LP V+
Sbjct 22 IWAYGPIGVRLADAERKAAVEAEDAHRGRRDALILELSTGGAAVPPDRPGYALPFPVTDR 81
Query 97 ADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAA 156
A A RLAV +E A WRAV+ A T +R A +AL E AV ATRW R G P+T A
Sbjct 82 ASALRLAVEVEERTAAFWRAVLP-ASTGAERDRALSALIEYAVRATRWRRAAGITPLTVA 140
Query 157 FPG 159
FPG
Sbjct 141 FPG 143
>gi|134102377|ref|YP_001108038.1| hypothetical protein SACE_5930 [Saccharopolyspora erythraea NRRL
2338]
gi|291004238|ref|ZP_06562211.1| hypothetical protein SeryN2_06942 [Saccharopolyspora erythraea
NRRL 2338]
gi|133915000|emb|CAM05113.1| hypothetical protein SACE_5930 [Saccharopolyspora erythraea NRRL
2338]
Length=148
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/136 (35%), Positives = 69/136 (51%), Gaps = 1/136 (0%)
Query 25 ALCDALAVEHATIYGYGIVSAL-SPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIA 83
AL AL EHA ++ YG+ SA S V + +A+ HR +RD+ ++ G T P A
Sbjct 11 ALRSALGAEHAAVWVYGLASAFVSESRVRSALDEAMSAHRAQRDEADKLVRDSGQTPPAA 70
Query 84 AAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATR 143
Y + +S A R+ ++E+D WR+V+E++E R A LT +A ATR
Sbjct 71 QPAYDVGQSLSDQTSAIRVLAKVEHDCQVGWRSVLENSEDPGLRRTALNGLTTAATRATR 130
Query 144 WNRVLGAWPITAAFPG 159
W +G P FPG
Sbjct 131 WRLTIGERPAAPEFPG 146
>gi|258652411|ref|YP_003201567.1| hypothetical protein Namu_2201 [Nakamurella multipartita DSM
44233]
gi|258555636|gb|ACV78578.1| hypothetical protein Namu_2201 [Nakamurella multipartita DSM
44233]
Length=143
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 75/135 (56%), Gaps = 1/135 (0%)
Query 25 ALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAA 84
A+ AL E A ++ Y +V+A + + ++ADA H RRD L+A G +AP A
Sbjct 8 AMQAALVAEQAAVWAYALVAAHARDQ-SAMIADARSGHLLRRDATAARLTAAGASAPEPA 66
Query 85 AGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRW 144
A YQ+ + V A +LA +E+ A AWR V+ ++ A+ R FA T L+E+AV W
Sbjct 67 AAYQVAVDVQDQNSAWQLAQDIESGVAAAWRVVIGSSDDAEVRGFALTGLSEAAVRLAMW 126
Query 145 NRVLGAWPITAAFPG 159
++ G P T AFPG
Sbjct 127 KQIAGINPPTIAFPG 141
>gi|317508526|ref|ZP_07966193.1| hypothetical protein HMPREF9336_02565 [Segniliparus rugosus ATCC
BAA-974]
gi|316253217|gb|EFV12620.1| hypothetical protein HMPREF9336_02565 [Segniliparus rugosus ATCC
BAA-974]
Length=148
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/121 (38%), Positives = 62/121 (52%), Gaps = 1/121 (0%)
Query 40 YGIVSA-LSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSAAD 98
YG+V A + P L + + +HR RD +L+ G P AA Y +P+ V+
Sbjct 26 YGVVQAYVRHPATTRLAEEIVTEHRAHRDGAAELLARSGAKTPAAAPAYTVPITVTDGPS 85
Query 99 AARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITAAFP 158
AARLA +E + A AWRA+VE A + R AL + AV A +W L P+ A FP
Sbjct 86 AARLAEHVEQETAQAWRALVERATLPEVRGHGVRALGDCAVRAAQWRENLDQNPLAAPFP 145
Query 159 G 159
G
Sbjct 146 G 146
>gi|315502520|ref|YP_004081407.1| hypothetical protein ML5_1724 [Micromonospora sp. L5]
gi|315409139|gb|ADU07256.1| hypothetical protein ML5_1724 [Micromonospora sp. L5]
Length=147
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/145 (41%), Positives = 74/145 (52%), Gaps = 3/145 (2%)
Query 15 SPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLS 74
SP+ G A A DALA E+A I+ YG++ A HR RRD +++ L+
Sbjct 3 SPTTGPASALA--DALAAEYAAIWAYGVIGVHLTEAARTAARAAEAAHRSRRDALLLQLA 60
Query 75 ARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTAL 134
P AGY LP V+ A A RLAV +E A WRA + H T DR A AL
Sbjct 61 EGSGQVPADRAGYALPYPVTDRASALRLAVEIEERTAGHWRAALPHT-TGADRNTALAAL 119
Query 135 TESAVMATRWNRVLGAWPITAAFPG 159
T+ A+ ATRW R G P+T FPG
Sbjct 120 TDCALRATRWRRTAGVTPVTVPFPG 144
>gi|302865963|ref|YP_003834600.1| hypothetical protein Micau_1464 [Micromonospora aurantiaca ATCC
27029]
gi|302568822|gb|ADL45024.1| hypothetical protein Micau_1464 [Micromonospora aurantiaca ATCC
27029]
Length=147
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 74/145 (52%), Gaps = 3/145 (2%)
Query 15 SPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLS 74
+P+ G A A DALA E+A I+ YG++ A HR RRD +++ L+
Sbjct 3 NPTTGPASALA--DALAAEYAAIWAYGVIGVHLTEAARTAARAAEAAHRSRRDALLLQLA 60
Query 75 ARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTAL 134
P AGY LP V+ A A RLAV +E A WRA + H T DR A AL
Sbjct 61 EGSGQVPADRAGYALPYPVTDRASALRLAVEIEERTAGHWRAALPHT-TGADRNTALAAL 119
Query 135 TESAVMATRWNRVLGAWPITAAFPG 159
T+ A+ ATRW R G P+T FPG
Sbjct 120 TDCALRATRWRRTAGVTPVTVPFPG 144
>gi|296394259|ref|YP_003659143.1| hypothetical protein Srot_1852 [Segniliparus rotundus DSM 44985]
gi|296181406|gb|ADG98312.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=148
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (37%), Positives = 63/124 (51%), Gaps = 1/124 (0%)
Query 37 IYGYGIVSA-LSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSS 95
+Y YG+V A + L AD + +HR RD L+ G P AA Y LP+ V+
Sbjct 23 VYAYGVVQAWVRHQATAQLAADIITEHRAHRDAAESRLARAGAAVPTAAPAYTLPITVTD 82
Query 96 AADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVLGAWPITA 155
AARLA ++E++ A AWRA+VE A + R L + AV +W L P+ +
Sbjct 83 GPAAARLAAQIEHETAQAWRALVERATLPEVREEGVRHLGDCAVRLAQWRENLDLRPVAS 142
Query 156 AFPG 159
FPG
Sbjct 143 PFPG 146
>gi|29829098|ref|NP_823732.1| hypothetical protein SAV_2556 [Streptomyces avermitilis MA-4680]
gi|29606204|dbj|BAC70267.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=167
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/149 (39%), Positives = 72/149 (49%), Gaps = 8/149 (5%)
Query 11 TPKRSPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVI 70
TPK +E SA+ AL AL EHA +YGYG+V A HR RRD++
Sbjct 10 TPKAESTE-SAELRALQAALGAEHAAVYGYGVVGGKIGQARRADARAAYDAHRARRDELA 68
Query 71 VMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFA 130
+ G T AAAGY LP V A A RLA +E A + +V A T R A
Sbjct 69 RSVRDLGGTPQAAAAGYALPFAVPDATAAVRLAAELEERVAGVYSDLV-RAGTGARRRSA 127
Query 131 STALTESAVMATRWNRVLGAWPITAAFPG 159
+ AL E+AV A RW+ + AFPG
Sbjct 128 AEALREAAVRAVRWS------GESVAFPG 150
>gi|145593913|ref|YP_001158210.1| hypothetical protein Strop_1365 [Salinispora tropica CNB-440]
gi|145303250|gb|ABP53832.1| hypothetical protein Strop_1365 [Salinispora tropica CNB-440]
Length=149
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/145 (37%), Positives = 73/145 (51%), Gaps = 1/145 (0%)
Query 15 SPSEGSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLS 74
+P+ G+ ++A AL E+A I+ YG + DA HR RRD++++ L+
Sbjct 3 TPTPGTGAHSAHTAALTAEYAAIWAYGPIGVRLNGPAQEAARDAEAAHRRRRDELVLHLT 62
Query 75 ARGVTAPIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTAL 134
G + P AGY LP V+ A RLAV +E A WRA V + +R A AL
Sbjct 63 DAGNSLPADQAGYTLPFPVTDQPSALRLAVDIEERTAAFWRAAVAATD-GTERERALAAL 121
Query 135 TESAVMATRWNRVLGAWPITAAFPG 159
+ AV ATRW R P+T FPG
Sbjct 122 VDCAVRATRWRRTAEITPLTVPFPG 146
>gi|271963644|ref|YP_003337840.1| hypothetical protein Sros_2112 [Streptosporangium roseum DSM
43021]
gi|270506819|gb|ACZ85097.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=149
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/140 (37%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query 20 SADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVT 79
SAD L ALA EHA +Y YG++ A S + + DA HR RRD + ++ +RG T
Sbjct 2 SADQG-LGTALAAEHAAVYAYGVIGARSTGNLRAVATDAFDAHRARRDRLRTLIISRGGT 60
Query 80 APIAAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAV 139
A Y+LP+ S+AA A LAV +E +A+ + + D R A+ A+ E V
Sbjct 61 PVEPNASYELPVTPSTAAQAVELAVLVEQGVTSAYLELTASGDP-DLRKMAALAMQECVV 119
Query 140 MATRWNRVLGAWPITAAFPG 159
R G P AFPG
Sbjct 120 ------RAYGLRPEIEAFPG 133
>gi|256396853|ref|YP_003118417.1| hypothetical protein Caci_7752 [Catenulispora acidiphila DSM
44928]
gi|256363079|gb|ACU76576.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=135
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (37%), Positives = 71/136 (53%), Gaps = 7/136 (5%)
Query 24 AALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIA 83
+AL AL EHA +YGYG+++ +A HR RRD +I ++ A+G A
Sbjct 2 SALQTALGNEHAAVYGYGVLAVHLVGAQQNAARNAYDTHRARRDILIGLIEAQGDKPVAA 61
Query 84 AAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATR 143
A Y +P V+SAADA RLA ++E ++ VV+ + + D R LT++AV A R
Sbjct 62 APAYAIPFPVNSAADALRLAAQLEERLGASYADVVQ-SSSGDTRRTGLEWLTDAAVRAVR 120
Query 144 WNRVLGAWPITAAFPG 159
W + AFPG
Sbjct 121 WR------GTSVAFPG 130
>gi|291298938|ref|YP_003510216.1| hypothetical protein Snas_1416 [Stackebrandtia nassauensis DSM
44728]
gi|290568158|gb|ADD41123.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length=145
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/137 (35%), Positives = 63/137 (46%), Gaps = 1/137 (0%)
Query 23 NAALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPI 82
+ L L E+ +Y Y + A K HR RRDD++V ++ G P
Sbjct 3 DKGLKLGLRTEYEAVYAYSLAGAQLTGKALEAAQSNEKVHRDRRDDIMVRMTKAGDEPPA 62
Query 83 AAAGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMAT 142
A YQLP +V+ A L +E + WR+V+ T DR A+ A + SAV
Sbjct 63 EEAAYQLPGEVTDEKSAKALLSEIELRTTSMWRSVLADT-TGGDRKAAAKAYSSSAVTMA 121
Query 143 RWNRVLGAWPITAAFPG 159
RW R LG P T AFPG
Sbjct 122 RWKRALGESPSTTAFPG 138
>gi|311898671|dbj|BAJ31079.1| hypothetical protein KSE_53030 [Kitasatospora setae KM-6054]
Length=316
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/102 (46%), Positives = 57/102 (56%), Gaps = 2/102 (1%)
Query 10 ATPKRSPSE-GSADNAALCDALAVEHATIYGYGIVSALSPPGVNFLVA-DALKQHRHRRD 67
A+P SPS +AD AAL +ALA EHA +YGYG+V A P G A H+ RRD
Sbjct 170 ASPSASPSAVPAADTAALQNALAAEHAAVYGYGVVGAFLPTGPQREDARTTYAAHQARRD 229
Query 68 DVIVMLSARGVTAPIAAAGYQLPMQVSSAADAARLAVRMEND 109
+LS G + AAAGY+LP QV A A +LA +E
Sbjct 230 TWQRVLSGTGASPTAAAAGYRLPFQVKDAPTATQLAAYLETQ 271
>gi|257055488|ref|YP_003133320.1| hypothetical protein Svir_14530 [Saccharomonospora viridis DSM
43017]
gi|256585360|gb|ACU96493.1| hypothetical protein Svir_14530 [Saccharomonospora viridis DSM
43017]
Length=323
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/138 (34%), Positives = 60/138 (44%), Gaps = 0/138 (0%)
Query 25 ALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAA 84
AL ALA EHA I+ YG+ A G + + H +RRD +LS G T
Sbjct 183 ALQSALAAEHAAIWVYGLARAFLGSGYENGITRGERAHINRRDACQRVLSEAGHTPRPTE 242
Query 85 AGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRW 144
Y LP +V+ AA E+D ATAW V+E + R A LT +A W
Sbjct 243 PAYVLPEEVTDETSAALAVATAESDAATAWHGVLERTDDKTVRTLAVKCLTGAATRGVHW 302
Query 145 NRVLGAWPITAAFPGGDE 162
R G P PG ++
Sbjct 303 RREAGLQPAVPPLPGRED 320
>gi|300788187|ref|YP_003768478.1| hypothetical protein AMED_6342 [Amycolatopsis mediterranei U32]
gi|299797701|gb|ADJ48076.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340529772|gb|AEK44977.1| hypothetical protein RAM_32520 [Amycolatopsis mediterranei S699]
Length=311
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/131 (36%), Positives = 62/131 (48%), Gaps = 0/131 (0%)
Query 29 ALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQ 88
ALA EHA ++ YG+VSA P +H RRD + LSA G T A Y
Sbjct 178 ALAAEHAAMWVYGLVSAFLPGEFGDAQKSGTAEHALRRDYLQTTLSAAGATPVAPEAAYV 237
Query 89 LPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRWNRVL 148
V+ A A+++ E D A+AW AV++H + A R A AL ++ T W
Sbjct 238 PKTPVTDAKSASQVVATAEADCASAWLAVIDHTDDAGLRTTALHALVAASRRGTPWRAEA 297
Query 149 GAWPITAAFPG 159
G P+ A PG
Sbjct 298 GEKPVAIAMPG 308
>gi|297202729|ref|ZP_06920126.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148176|gb|EFH28863.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=159
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 62/135 (46%), Gaps = 7/135 (5%)
Query 25 ALCDALAVEHATIYGYGIVSALSPPGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAA 84
AL ALA EHA +YGYG+V A HR RRD ++ + G AA
Sbjct 9 ALQKALAAEHAAVYGYGVVGGRIGAARRAEAKAAYDAHRARRDTLVRAVRDLGGRPVAAA 68
Query 85 AGYQLPMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAVMATRW 144
Y LP V A A RLA +E+ A W VV A + R A+ AL E+AV A RW
Sbjct 69 PAYALPFPVPDPAAAVRLAADLEDRVAGVWSDVV-RATGGERRSTAAEALREAAVRAVRW 127
Query 145 NRVLGAWPITAAFPG 159
+ AFPG
Sbjct 128 R------GESVAFPG 136
Lambda K H
0.316 0.127 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130518307686
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40