BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2865
Length=93
Score E
Sequences producing significant alignments: (Bits) Value
gi|226887832|pdb|3G5O|A Chain A, The Crystal Structure Of The To... 190 5e-47
gi|15610002|ref|NP_217381.1| hypothetical protein Rv2865 [Mycoba... 190 5e-47
gi|340627858|ref|YP_004746310.1| hypothetical protein MCAN_28871... 188 2e-46
gi|333990699|ref|YP_004523313.1| hypothetical protein JDM601_205... 165 2e-39
gi|312195904|ref|YP_004015965.1| prevent-host-death family prote... 125 2e-27
gi|262202561|ref|YP_003273769.1| prevent-host-death family prote... 98.2 4e-19
gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_0... 96.7 9e-19
gi|50955754|ref|YP_063042.1| hypothetical protein Lxx22678 [Leif... 93.6 9e-18
gi|326382748|ref|ZP_08204438.1| prevent-host-death family protei... 90.9 5e-17
gi|296137984|ref|YP_003645227.1| prevent-host-death family prote... 89.0 2e-16
gi|15608387|ref|NP_215763.1| hypothetical protein Rv1247c [Mycob... 80.9 5e-14
gi|284042316|ref|YP_003392656.1| prevent-host-death family prote... 80.5 8e-14
gi|271969007|ref|YP_003343203.1| hypothetical protein Sros_7794 ... 69.3 2e-10
gi|284990457|ref|YP_003409011.1| prevent-host-death family prote... 69.3 2e-10
gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis] 66.2 1e-09
gi|256371947|ref|YP_003109771.1| prevent-host-death family prote... 63.5 9e-09
gi|297562520|ref|YP_003681494.1| prevent-host-death family prote... 62.4 2e-08
gi|301057765|ref|ZP_07198834.1| toxin-antitoxin system, antitoxi... 62.0 3e-08
gi|336319416|ref|YP_004599384.1| prevent-host-death family prote... 61.6 4e-08
gi|226362357|ref|YP_002780135.1| hypothetical protein ROP_29430 ... 61.2 5e-08
gi|302036727|ref|YP_003797049.1| antitoxin of toxin-antitoxin st... 60.1 1e-07
gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 ba... 59.7 1e-07
gi|323358564|ref|YP_004224960.1| antitoxin of toxin-antitoxin st... 58.9 2e-07
gi|291437271|ref|ZP_06576661.1| predicted protein [Streptomyces ... 57.8 6e-07
gi|317126593|ref|YP_004100705.1| prevent-host-death family prote... 55.8 2e-06
gi|335045253|ref|ZP_08538276.1| prevent-host-death family protei... 54.3 6e-06
gi|237809583|ref|YP_002894023.1| prevent-host-death family prote... 53.9 8e-06
gi|315443133|ref|YP_004076012.1| prevent-host-death family prote... 53.1 1e-05
gi|23006087|ref|ZP_00048575.1| COG2161: Antitoxin of toxin-antit... 52.8 1e-05
gi|184152640|ref|YP_001840843.1| hypothetical protein MMAR_p16 [... 52.8 2e-05
gi|198275576|ref|ZP_03208107.1| hypothetical protein BACPLE_0174... 52.8 2e-05
gi|343928185|ref|ZP_08767640.1| hypothetical protein GOALK_110_0... 52.4 2e-05
gi|302038969|ref|YP_003799291.1| putative antitoxin YefM [Candid... 52.4 2e-05
gi|334118310|ref|ZP_08492400.1| prevent-host-death family protei... 52.4 2e-05
gi|319956796|ref|YP_004168059.1| prevent-host-death family prote... 52.4 2e-05
gi|154508471|ref|ZP_02044113.1| hypothetical protein ACTODO_0097... 52.0 3e-05
gi|167037984|ref|YP_001665562.1| prevent-host-death family prote... 52.0 3e-05
gi|146280119|ref|YP_001170276.1| hypothetical protein Rsph17025_... 52.0 3e-05
gi|329120229|ref|ZP_08248897.1| prevent-host-death family antito... 51.6 3e-05
gi|171059642|ref|YP_001791991.1| prevent-host-death family prote... 51.6 4e-05
gi|293194293|ref|ZP_06609979.1| toxin-antitoxin system, antitoxi... 51.2 5e-05
gi|86741369|ref|YP_481769.1| prevent-host-death protein [Frankia... 51.2 5e-05
gi|114570302|ref|YP_756982.1| prevent-host-death family protein ... 50.8 6e-05
gi|227873875|ref|ZP_03992097.1| conserved hypothetical protein [... 50.8 6e-05
gi|218779620|ref|YP_002430938.1| prevent-host-death family prote... 50.4 8e-05
gi|325298916|ref|YP_004258833.1| prevent-host-death family prote... 50.4 8e-05
gi|298530053|ref|ZP_07017455.1| prevent-host-death family protei... 50.4 9e-05
gi|83699620|gb|ABC40716.1| antitoxin protein [Leifsonia xyli sub... 50.1 1e-04
gi|148263387|ref|YP_001230093.1| prevent-host-death family prote... 49.7 2e-04
gi|312128374|ref|YP_003993248.1| prevent-host-death family prote... 49.3 2e-04
>gi|226887832|pdb|3G5O|A Chain A, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
gi|226887835|pdb|3G5O|D Chain D, The Crystal Structure Of The Toxin-Antitoxin Complex
Relbe2 (Rv2865-2866) From Mycobacterium Tuberculosis
Length=108
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI
Sbjct 8 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 67
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 93
RESIAEADADIASGRTYGEDEIRAEFGVPRRPH
Sbjct 68 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 100
>gi|15610002|ref|NP_217381.1| hypothetical protein Rv2865 [Mycobacterium tuberculosis H37Rv]
gi|31794042|ref|NP_856535.1| hypothetical protein Mb2890 [Mycobacterium bovis AF2122/97]
gi|121638747|ref|YP_978971.1| hypothetical protein BCG_2887 [Mycobacterium bovis BCG str. Pasteur
1173P2]
72 more sequence titles
Length=93
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/93 (100%), Positives = 93/93 (100%), Gaps = 0/93 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI
Sbjct 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 93
RESIAEADADIASGRTYGEDEIRAEFGVPRRPH
Sbjct 61 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 93
>gi|340627858|ref|YP_004746310.1| hypothetical protein MCAN_28871 [Mycobacterium canettii CIPT
140010059]
gi|340006048|emb|CCC45218.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=93
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/93 (99%), Positives = 92/93 (99%), Gaps = 0/93 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MRILPIS IKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI
Sbjct 1 MRILPISKIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 93
RESIAEADADIASGRTYGEDEIRAEFGVPRRPH
Sbjct 61 RESIAEADADIASGRTYGEDEIRAEFGVPRRPH 93
>gi|333990699|ref|YP_004523313.1| hypothetical protein JDM601_2059 [Mycobacterium sp. JDM601]
gi|333486667|gb|AEF36059.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=96
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/91 (87%), Positives = 85/91 (94%), Gaps = 0/91 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MRIL IS +K KLNE+VDAV+ TQDQITITKNGAPAAVLVGADEWESLQETLYWL+QPGI
Sbjct 4 MRILAISKMKDKLNEYVDAVAQTQDQITITKNGAPAAVLVGADEWESLQETLYWLSQPGI 63
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRR 91
+ESIAEADADI +GRTYGEDEIRAEFG PRR
Sbjct 64 KESIAEADADIDAGRTYGEDEIRAEFGAPRR 94
>gi|312195904|ref|YP_004015965.1| prevent-host-death family protein [Frankia sp. EuI1c]
gi|311227240|gb|ADP80095.1| prevent-host-death family protein [Frankia sp. EuI1c]
Length=93
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/89 (72%), Positives = 77/89 (87%), Gaps = 0/89 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ LPIS K +LNE VDAV+ T++Q+TIT+NG+PAAVLVG DEWES+QETLYWL+QPGI
Sbjct 1 MQTLPISKAKDRLNELVDAVALTREQVTITRNGSPAAVLVGVDEWESIQETLYWLSQPGI 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVP 89
RES+AEADAD +GR GEDE+RA FGVP
Sbjct 61 RESVAEADADADAGRVLGEDEMRARFGVP 89
>gi|262202561|ref|YP_003273769.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
gi|262085908|gb|ACY21876.1| prevent-host-death family protein [Gordonia bronchialis DSM 43247]
Length=91
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/91 (49%), Positives = 65/91 (72%), Gaps = 0/91 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M +P+ K KL+ +D+ +T D ITITK+G PAAVL+ AD+ ESL ET+YWL++ G+
Sbjct 1 MTTVPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGV 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRR 91
R+ +A ADA+ A+G T D++RAE G+P +
Sbjct 61 RDDVATADAEYAAGHTASIDDLRAEHGMPPK 91
>gi|343928186|ref|ZP_08767641.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
gi|343761884|dbj|GAA14567.1| hypothetical protein GOALK_110_00270 [Gordonia alkanivorans NBRC
16433]
Length=88
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/88 (49%), Positives = 64/88 (73%), Gaps = 0/88 (0%)
Query 4 LPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRES 63
+P+ K KL+ +D+ +T D ITITK+G PAAVL+ AD+ ESL ET+YWL++ G+R+
Sbjct 1 MPLGEAKDKLSALIDSAETTHDIITITKHGKPAAVLMSADDLESLHETIYWLSRAGLRDD 60
Query 64 IAEADADIASGRTYGEDEIRAEFGVPRR 91
+A ADA+ A+G T D++RAE G+P +
Sbjct 61 VATADAEYAAGHTVSIDDLRAEHGLPPK 88
>gi|50955754|ref|YP_063042.1| hypothetical protein Lxx22678 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952236|gb|AAT89937.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length=91
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/91 (48%), Positives = 62/91 (69%), Gaps = 0/91 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ + +S K KL+ F+D V S + I IT++G AAVL+ D+ +SL ETL+WL+Q GI
Sbjct 1 MKTVSLSEAKDKLSRFIDEVESEHEIIQITRHGHGAAVLISQDDLDSLHETLFWLSQSGI 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRR 91
RE +AE + SG T G D++RA FG+P+R
Sbjct 61 REDLAEGRRVVESGTTVGADDVRARFGLPKR 91
>gi|326382748|ref|ZP_08204438.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198338|gb|EGD55522.1| prevent-host-death family protein [Gordonia neofelifaecis NRRL
B-59395]
Length=90
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/88 (48%), Positives = 60/88 (69%), Gaps = 0/88 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M +P+ K +L+ VD+ T D+ITITK+G PAAVL+ AD+ E L ET++WL+QPGI
Sbjct 1 MTTVPLGEAKARLSALVDSAEQTHDRITITKHGKPAAVLISADDLEELTETIHWLSQPGI 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGV 88
RE+I D + SG+T ++RAE G+
Sbjct 61 RETIDAGDREYESGQTTSLADLRAELGI 88
>gi|296137984|ref|YP_003645227.1| prevent-host-death family protein [Tsukamurella paurometabola
DSM 20162]
gi|296026118|gb|ADG76888.1| prevent-host-death family protein [Tsukamurella paurometabola
DSM 20162]
Length=91
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/91 (47%), Positives = 63/91 (70%), Gaps = 0/91 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M +P+ K +L+ VD+ ST D ITIT++G AAVL+ AD+ ES+QET++WL++PG
Sbjct 1 MTTVPLGEAKDRLSALVDSAESTHDIITITRHGRAAAVLMSADDLESMQETIFWLSRPGT 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRR 91
+IAEA+ D A+G +++RAEFG+ R
Sbjct 61 AAAIAEAEHDAAAGTASSGNDLRAEFGLTPR 91
>gi|15608387|ref|NP_215763.1| hypothetical protein Rv1247c [Mycobacterium tuberculosis H37Rv]
gi|31792440|ref|NP_854933.1| hypothetical protein Mb1279c [Mycobacterium bovis AF2122/97]
gi|121637176|ref|YP_977399.1| hypothetical protein BCG_1307c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
77 more sequence titles
Length=89
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (45%), Positives = 58/86 (68%), Gaps = 0/86 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M ++P+ ++ +L+E+V V T ++ITIT++G PAAVL+ AD+ S++ETL L PG
Sbjct 1 MAVVPLGEVRNRLSEYVAEVELTHERITITRHGHPAAVLISADDLASIEETLEVLRTPGA 60
Query 61 RESIAEADADIASGRTYGEDEIRAEF 86
E+I E AD+A+GR DEIR +
Sbjct 61 SEAIREGLADVAAGRFVSNDEIRNRY 86
>gi|284042316|ref|YP_003392656.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
gi|283946537|gb|ADB49281.1| prevent-host-death family protein [Conexibacter woesei DSM 14684]
Length=99
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/84 (45%), Positives = 55/84 (66%), Gaps = 0/84 (0%)
Query 4 LPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRES 63
LP+S +K L+E VD V D++ +T+NG PAAVL+ D+ ESL+ETL L+ + E
Sbjct 11 LPLSAVKSHLSELVDRVEGQHDRVVVTRNGRPAAVLISPDDLESLEETLAILSDRAMMEK 70
Query 64 IAEADADIASGRTYGEDEIRAEFG 87
+ E DA IA+G + +E+RA+ G
Sbjct 71 VREGDAAIAAGDSISLEELRAQLG 94
>gi|271969007|ref|YP_003343203.1| hypothetical protein Sros_7794 [Streptosporangium roseum DSM
43021]
gi|270512182|gb|ACZ90460.1| hypothetical protein Sros_7794 [Streptosporangium roseum DSM
43021]
Length=94
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 55/86 (64%), Gaps = 0/86 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M +LP++ + +L+ V++ ST ++ IT+NG PAAVLV D++E+++E + LA
Sbjct 3 MTVLPLADARARLSSIVESAVSTHERFEITRNGVPAAVLVAVDDYETMREMIEILASAET 62
Query 61 RESIAEADADIASGRTYGEDEIRAEF 86
++ E AD+ +GRT+ + E+ AE
Sbjct 63 VAALREGIADLEAGRTHSQAEVEAEL 88
>gi|284990457|ref|YP_003409011.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
gi|284063702|gb|ADB74640.1| prevent-host-death family protein [Geodermatophilus obscurus
DSM 43160]
Length=95
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/82 (37%), Positives = 53/82 (65%), Gaps = 0/82 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M ++ +K ++ +D V+ T +++T+TKNG+P AV++ +++ESL ETL L+ P
Sbjct 5 MTTQSLAAVKAHFSQVIDEVAGTHERVTVTKNGSPVAVILAVEDYESLMETLEILSDPRA 64
Query 61 RESIAEADADIASGRTYGEDEI 82
R I +A+ +A+G YGE E+
Sbjct 65 RSDIRQAEELMAAGEVYGEAEV 86
>gi|126675444|gb|ABO26358.1| TalA [Leifsonia xyli subsp. cynodontis]
Length=89
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (42%), Positives = 56/87 (65%), Gaps = 0/87 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ + +S K KL+ V+ V +T D + IT++G PAAVL+ ++ +SLQE L WL+ P
Sbjct 1 MQTMSVSEAKDKLSNLVEGVEATHDAVVITRHGKPAAVLISPEDLDSLQEMLAWLSDPAH 60
Query 61 RESIAEADADIASGRTYGEDEIRAEFG 87
+AEA+ D+A+GR DE+RA+
Sbjct 61 AAEMAEAEEDVAAGRMLSLDEVRAQLA 87
>gi|256371947|ref|YP_003109771.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008531|gb|ACU54098.1| prevent-host-death family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length=99
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/90 (35%), Positives = 54/90 (60%), Gaps = 0/90 (0%)
Query 2 RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIR 61
+I+PI ++ +L++ +D V+ ++ + +T++G PAAVLV DE+E+L+ET L+
Sbjct 9 KIVPIRELRSELSQVIDQVADLREHVIVTRHGRPAAVLVPVDEYEALEETAEILSDTETM 68
Query 62 ESIAEADADIASGRTYGEDEIRAEFGVPRR 91
+I E ++ G T DE+R E RR
Sbjct 69 AAIDEGRREVERGETLTLDELRQELQSRRR 98
>gi|297562520|ref|YP_003681494.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296846968|gb|ADH68988.1| prevent-host-death family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=96
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (37%), Positives = 47/82 (58%), Gaps = 0/82 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M LP++ + L++ VD V T D +TIT+NG P+AV++ D++ES+ ET L P
Sbjct 1 MTTLPLAEARNNLSKIVDEVERTHDAVTITRNGRPSAVVISVDDYESMMETFALLDSPEE 60
Query 61 RESIAEADADIASGRTYGEDEI 82
+ S+A A + G DE+
Sbjct 61 QASLARAKEEYERGDVVTGDEM 82
>gi|301057765|ref|ZP_07198834.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
gi|300448076|gb|EFK11772.1| toxin-antitoxin system, antitoxin component, PHD family [delta
proteobacterium NaphS2]
Length=90
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (37%), Positives = 52/88 (60%), Gaps = 0/88 (0%)
Query 2 RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIR 61
+ +P++ K +L+ + V D+ ITKNG AVL+ +DE+E L ETL L+Q R
Sbjct 3 KTIPVAEAKKRLSAIIKDVDEKYDRYAITKNGVNKAVLLSSDEFEGLLETLDILSQREER 62
Query 62 ESIAEADADIASGRTYGEDEIRAEFGVP 89
E+I +A ++ SG+T EI+ +G+
Sbjct 63 EAIEKAKKEVRSGQTVSFKEIQRRYGLK 90
>gi|336319416|ref|YP_004599384.1| prevent-host-death family protein [Cellvibrio gilvus ATCC 13127]
gi|336102997|gb|AEI10816.1| prevent-host-death family protein [Cellvibrio gilvus ATCC 13127]
Length=91
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (37%), Positives = 51/86 (60%), Gaps = 0/86 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M ++ +K L+ FVD+V T +++TIT+NG PAAVL+ D+ SL+ET+ L+ G+
Sbjct 1 MTTTSLAKVKAGLSAFVDSVHDTHERVTITRNGEPAAVLIAPDDLASLEETIAILSDRGL 60
Query 61 RESIAEADADIASGRTYGEDEIRAEF 86
+ + A +IA G D A++
Sbjct 61 MDDVRTAQREIADGDVIDGDAFLADW 86
>gi|226362357|ref|YP_002780135.1| hypothetical protein ROP_29430 [Rhodococcus opacus B4]
gi|226240842|dbj|BAH51190.1| hypothetical protein [Rhodococcus opacus B4]
Length=101
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/89 (32%), Positives = 54/89 (61%), Gaps = 0/89 (0%)
Query 3 ILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRE 62
++ ++ +K L+E V V++ +++T+T +G P+AVL+ ++ ESL+ET+ L+ P +
Sbjct 10 VMSLAAVKAHLSELVGRVNAQHERVTVTVHGQPSAVLIATEDLESLEETIAILSDPDTLQ 69
Query 63 SIAEADADIASGRTYGEDEIRAEFGVPRR 91
+A +DA++A G E E+ RR
Sbjct 70 RLAASDAELARGEGESEAELTKVMSERRR 98
>gi|302036727|ref|YP_003797049.1| antitoxin of toxin-antitoxin stability system [Candidatus Nitrospira
defluvii]
gi|300604791|emb|CBK41123.1| Antitoxin of toxin-antitoxin stability system [Candidatus Nitrospira
defluvii]
Length=98
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (39%), Positives = 47/75 (63%), Gaps = 0/75 (0%)
Query 2 RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIR 61
+ L +S +K +L E V V ++++ ITKNG PAA+L+ DE+ L+ET+ L+ PG+
Sbjct 3 KTLSLSEVKTRLPELVAGVQEREEEVIITKNGRPAAILMNVDEYTRLKETVDVLSDPGLM 62
Query 62 ESIAEADADIASGRT 76
IAE+ A + +T
Sbjct 63 SQIAESRAYYKTKQT 77
>gi|258593421|emb|CBE69760.1| Prevent-host-death protein [NC10 bacterium 'Dutch sediment']
Length=92
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (54%), Positives = 37/52 (72%), Gaps = 0/52 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETL 52
M+ LP+S +K KL+ +D V S +QI IT+NG PAAVL+ DE ES QET+
Sbjct 1 MKTLPLSEVKMKLSRLIDEVHSRDEQIVITRNGKPAAVLISPDEAESWQETV 52
>gi|323358564|ref|YP_004224960.1| antitoxin of toxin-antitoxin stability system [Microbacterium
testaceum StLB037]
gi|323274935|dbj|BAJ75080.1| antitoxin of toxin-antitoxin stability system [Microbacterium
testaceum StLB037]
Length=104
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (33%), Positives = 55/91 (61%), Gaps = 0/91 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M L ++ + L++ V++ +T ++ +T+NG AVL+ AD+++SL ET+ L++P
Sbjct 11 MTTLSLADARANLSKLVESAVTTHERFDVTRNGDRVAVLLSADDYDSLLETVDILSRPDE 70
Query 61 RESIAEADADIASGRTYGEDEIRAEFGVPRR 91
++ E AD+A GRT +++RA V R
Sbjct 71 IAAVREGLADLAEGRTSSLEDVRAAMTVRGR 101
>gi|291437271|ref|ZP_06576661.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340166|gb|EFE67122.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length=78
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/67 (42%), Positives = 45/67 (68%), Gaps = 0/67 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M P++ + +L+E VD+V+++ + ITK+G P AV++GADE+ESL ETL L+
Sbjct 1 MDAAPLTDARDRLSEIVDSVAASGEAFVITKHGKPMAVILGADEYESLIETLNVLSDSDT 60
Query 61 RESIAEA 67
++I EA
Sbjct 61 MDAINEA 67
>gi|317126593|ref|YP_004100705.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
gi|315590681|gb|ADU49978.1| prevent-host-death family protein [Intrasporangium calvum DSM
43043]
Length=88
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (34%), Positives = 43/74 (59%), Gaps = 0/74 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M + P+ ++ ++ +D V +++T+T+NG P AV++ D+ L+ETL L+ P
Sbjct 1 MTVEPLRDVRNHFSDVIDRVEHEHERVTVTRNGRPVAVILSPDDLAQLEETLSVLSDPEA 60
Query 61 RESIAEADADIASG 74
I EADA A+G
Sbjct 61 LADIREADAAYATG 74
>gi|335045253|ref|ZP_08538276.1| prevent-host-death family protein [Oribacterium sp. oral taxon
108 str. F0425]
gi|333759039|gb|EGL36596.1| prevent-host-death family protein [Oribacterium sp. oral taxon
108 str. F0425]
Length=84
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (35%), Positives = 49/82 (60%), Gaps = 1/82 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M + I+ ++ L + V V+ + ITIT N AVL+G ++W+++QETLY + PG+
Sbjct 1 MTSISITKVRANLYQTVSEVNESSQPITITNNRGKNAVLIGEEDWKAIQETLYLNSIPGL 60
Query 61 RESI-AEADADIASGRTYGEDE 81
+SI A + D++ +Y +E
Sbjct 61 SQSILASKEEDLSECTSYDPNE 82
>gi|237809583|ref|YP_002894023.1| prevent-host-death family protein [Tolumonas auensis DSM 9187]
gi|237501844|gb|ACQ94437.1| prevent-host-death family protein [Tolumonas auensis DSM 9187]
Length=80
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (41%), Positives = 41/66 (63%), Gaps = 1/66 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ L + + L +D + + I I+ A +A+L+ AD+WES+QETLY L+ PG+
Sbjct 1 MKTLTATEARTNLYRLIDQTAESHQPIAISGKRA-SAILISADDWESIQETLYLLSVPGM 59
Query 61 RESIAE 66
RESI E
Sbjct 60 RESIKE 65
>gi|315443133|ref|YP_004076012.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
gi|315261436|gb|ADT98177.1| prevent-host-death family protein [Mycobacterium sp. Spyr1]
Length=94
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/86 (28%), Positives = 49/86 (57%), Gaps = 0/86 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M LP++ ++ L++ VD T +I +T+ G AAV++ A++++S+ ETL L+ +
Sbjct 1 MTTLPLAEVRANLSKLVDEAVRTHQRIEVTRQGRRAAVILSAEDYDSIMETLDILSDREL 60
Query 61 RESIAEADADIASGRTYGEDEIRAEF 86
+ + + D+A G + D++ E
Sbjct 61 MKELRQGQEDVARGNFHTLDDVAKEM 86
>gi|23006087|ref|ZP_00048575.1| COG2161: Antitoxin of toxin-antitoxin stability system [Magnetospirillum
magnetotacticum MS-1]
Length=76
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (44%), Positives = 36/58 (63%), Gaps = 0/58 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQP 58
M+ P+S K L+ VD V ST +TIT++G AAVL+ ++ +L ETL WL+ P
Sbjct 1 MQTYPMSEAKTNLSALVDEVESTHQPVTITRHGKAAAVLIAPEDLATLMETLAWLSDP 58
>gi|184152640|ref|YP_001840843.1| hypothetical protein MMAR_p16 [Mycobacterium marinum M]
gi|183178800|gb|ACC43909.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=59
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (72%), Positives = 30/32 (94%), Gaps = 0/32 (0%)
Query 60 IRESIAEADADIASGRTYGEDEIRAEFGVPRR 91
+RES+ EA+ADIA+GRT+GEDEIRA +GVPR+
Sbjct 28 VRESLREAEADIAAGRTFGEDEIRARYGVPRK 59
>gi|198275576|ref|ZP_03208107.1| hypothetical protein BACPLE_01741 [Bacteroides plebeius DSM 17135]
gi|198271205|gb|EDY95475.1| hypothetical protein BACPLE_01741 [Bacteroides plebeius DSM 17135]
Length=96
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/81 (28%), Positives = 43/81 (54%), Gaps = 0/81 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MR + ++ L ++DAV D + + + V++ DE+ SL+ET Y ++ P
Sbjct 1 MRTANYTDLRANLKSYIDAVIDDYDTVVVNRGNGKGVVMISLDEYNSLKETEYIMSSPET 60
Query 61 RESIAEADADIASGRTYGEDE 81
E+I + + DI +G + ++E
Sbjct 61 MEAIHKGEEDIKNGNSISQNE 81
>gi|343928185|ref|ZP_08767640.1| hypothetical protein GOALK_110_00260 [Gordonia alkanivorans NBRC
16433]
gi|343761883|dbj|GAA14566.1| hypothetical protein GOALK_110_00260 [Gordonia alkanivorans NBRC
16433]
Length=81
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 38/62 (62%), Gaps = 1/62 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M P+ K K +D+ +T D ITI+K+G PAAVL+ AD+ ESL+ET+ P +
Sbjct 1 MTTQPLGEAKDKFTALIDSAETTHDIITISKHGKPAAVLMSADDLESLRETIQRSRHP-L 59
Query 61 RE 62
RE
Sbjct 60 RE 61
>gi|302038969|ref|YP_003799291.1| putative antitoxin YefM [Candidatus Nitrospira defluvii]
gi|300607033|emb|CBK43366.1| putative Antitoxin YefM [Candidatus Nitrospira defluvii]
Length=98
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (39%), Positives = 44/68 (65%), Gaps = 0/68 (0%)
Query 2 RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIR 61
+ LP+S +K +L E + V ++++ +TKNG PAAVL+ E+ L++TL L+ P +
Sbjct 3 KTLPLSEVKTRLPELITGVDEREEEVVVTKNGRPAAVLINVQEYTRLKDTLDVLSDPALM 62
Query 62 ESIAEADA 69
+ IAE+ A
Sbjct 63 QQIAESRA 70
>gi|334118310|ref|ZP_08492400.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
gi|333460295|gb|EGK88905.1| prevent-host-death family protein [Microcoleus vaginatus FGP-2]
Length=78
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (42%), Positives = 42/67 (63%), Gaps = 1/67 (1%)
Query 3 ILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRE 62
++PI+ + +L + +DAVS + I I + AVL+ +W S+QETLY L+ PG+RE
Sbjct 1 MIPINEAQQQLQQLIDAVSQSHQPIVIAGQTS-NAVLLSESDWASVQETLYLLSVPGMRE 59
Query 63 SIAEADA 69
SI E A
Sbjct 60 SIREGLA 66
>gi|319956796|ref|YP_004168059.1| prevent-host-death family protein [Nitratifractor salsuginis
DSM 16511]
gi|319419200|gb|ADV46310.1| prevent-host-death family protein [Nitratifractor salsuginis
DSM 16511]
Length=84
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (32%), Positives = 43/82 (53%), Gaps = 1/82 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MR + S + L +D V ++ IT A+L+ DE+ +++ETLY L+ P
Sbjct 1 MRAVNYSHARNNLKSLIDDVDQNFEEYLITTKNNTKAMLISVDEYNAMKETLYLLSTPAN 60
Query 61 RESIAEADADIASGRTYGEDEI 82
RE + E+ I +GR + E E+
Sbjct 61 RERLLESIQQIEAGR-FSEKEL 81
>gi|154508471|ref|ZP_02044113.1| hypothetical protein ACTODO_00971 [Actinomyces odontolyticus
ATCC 17982]
gi|153798105|gb|EDN80525.1| hypothetical protein ACTODO_00971 [Actinomyces odontolyticus
ATCC 17982]
Length=89
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/70 (35%), Positives = 43/70 (62%), Gaps = 4/70 (5%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPG- 59
M+I+ + + + E +D V + +++I IT+ G + V++ DE+ESL ET+Y + P
Sbjct 1 MKIMTYTESRARYAEVLDQVVNDREEIVITRQGHESVVIMALDEYESLMETVYLMQSPAN 60
Query 60 ---IRESIAE 66
+RESIA+
Sbjct 61 ARHLRESIAQ 70
>gi|167037984|ref|YP_001665562.1| prevent-host-death family protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040881|ref|YP_001663866.1| prevent-host-death family protein [Thermoanaerobacter sp. X514]
gi|256751824|ref|ZP_05492697.1| prevent-host-death family protein [Thermoanaerobacter ethanolicus
CCSD1]
9 more sequence titles
Length=85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 44/68 (65%), Gaps = 1/68 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ +P++T++ + + ++ + + + I IT AVL+ ++W ++QETLY L+ P +
Sbjct 1 MKTIPVTTVRQNIYKILEQIMVSNEPIQITSKKG-NAVLISEEDWNAIQETLYLLSVPNL 59
Query 61 RESIAEAD 68
RESI E+D
Sbjct 60 RESIIESD 67
>gi|146280119|ref|YP_001170276.1| hypothetical protein Rsph17025_4120 [Rhodobacter sphaeroides
ATCC 17025]
gi|145558360|gb|ABP72971.1| hypothetical protein Rsph17025_4120 [Rhodobacter sphaeroides
ATCC 17025]
Length=89
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (35%), Positives = 48/85 (57%), Gaps = 4/85 (4%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQP-- 58
M IL + + L +D+ +++ IT+ G A V+VG +EW+++Q TL+ L+ P
Sbjct 1 MNILTYTDARKHLKSVMDSAIHDKEETVITRAGQEAVVVVGKEEWDAIQATLHLLSSPVN 60
Query 59 --GIRESIAEADADIASGRTYGEDE 81
+RESIA+ +A + R EDE
Sbjct 61 AARLRESIAQLNAGQGTERDLIEDE 85
>gi|329120229|ref|ZP_08248897.1| prevent-host-death family antitoxin [Neisseria bacilliformis
ATCC BAA-1200]
gi|327462570|gb|EGF08893.1| prevent-host-death family antitoxin [Neisseria bacilliformis
ATCC BAA-1200]
Length=83
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (36%), Positives = 44/76 (58%), Gaps = 0/76 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M + S ++ L +D V+ + + IT++G AAVL+ +E+ +L ET Y LA P
Sbjct 1 MYAVHASELRKNLAATLDRVADNAEPVLITRSGGAAAVLLDINEYNALAETAYLLASPAN 60
Query 61 RESIAEADADIASGRT 76
+A+ AD+A+GRT
Sbjct 61 AARLAKGVADVAAGRT 76
>gi|171059642|ref|YP_001791991.1| prevent-host-death family protein [Leptothrix cholodnii SP-6]
gi|170777087|gb|ACB35226.1| prevent-host-death family protein [Leptothrix cholodnii SP-6]
Length=80
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (59%), Gaps = 1/70 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M L S + L +D +++ I I +AVLV AD+W+++QETLY L+ PG+
Sbjct 1 MTTLTASQARANLYRLIDETAASHQPIHIAGKRT-SAVLVSADDWQAIQETLYLLSVPGM 59
Query 61 RESIAEADAD 70
RESI E A+
Sbjct 60 RESIKEGMAE 69
>gi|293194293|ref|ZP_06609979.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
odontolyticus F0309]
gi|292819740|gb|EFF78754.1| toxin-antitoxin system, antitoxin component, PHD family [Actinomyces
odontolyticus F0309]
Length=89
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPG- 59
M+I+ + + E +D V + +++I IT+ G + V++ DE+ESL ET+Y + P
Sbjct 1 MKIMTYTESRAHYAEVLDQVVNDREEIVITRQGHESVVIMALDEYESLMETVYLMQSPAN 60
Query 60 ---IRESIAE 66
+RESIA+
Sbjct 61 ARHLRESIAQ 70
>gi|86741369|ref|YP_481769.1| prevent-host-death protein [Frankia sp. CcI3]
gi|86568231|gb|ABD12040.1| Prevent-host-death protein [Frankia sp. CcI3]
Length=99
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/74 (33%), Positives = 43/74 (59%), Gaps = 0/74 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M LP + + +L+E +D V T D++ IT++G A+LV D+ +L+ET+ L+
Sbjct 1 MTTLPFTDARNRLSELLDDVERTHDRVEITRHGHAVAILVSPDDLAALEETVEVLSNRET 60
Query 61 RESIAEADADIASG 74
+AE+ A + +G
Sbjct 61 MRQLAESRAAVEAG 74
>gi|114570302|ref|YP_756982.1| prevent-host-death family protein [Maricaulis maris MCS10]
gi|114340764|gb|ABI66044.1| prevent-host-death family protein [Maricaulis maris MCS10]
Length=121
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 41/72 (57%), Gaps = 4/72 (5%)
Query 2 RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPG-- 59
RIL IS + L + V+ V++ + IT+ G V+V EWE+LQET Y L P
Sbjct 15 RILSISEARAALKDLVERVTADKAPAIITRQGGEPVVMVALSEWEALQETNYLLESPANA 74
Query 60 --IRESIAEADA 69
+R+SIA A+A
Sbjct 75 RRLRDSIAAAEA 86
>gi|227873875|ref|ZP_03992097.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227840301|gb|EEJ50709.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length=79
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (38%), Positives = 39/64 (61%), Gaps = 0/64 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M + I+ + KLN+ V V+ IT+ N AVL+G ++W+++QETLY + PG+
Sbjct 1 MTSINITKARAKLNQIVSEVNEYSQPITVINNRGKNAVLIGEEDWKAIQETLYLNSIPGM 60
Query 61 RESI 64
+SI
Sbjct 61 SQSI 64
>gi|218779620|ref|YP_002430938.1| prevent-host-death family protein [Desulfatibacillum alkenivorans
AK-01]
gi|218761004|gb|ACL03470.1| prevent-host-death family protein [Desulfatibacillum alkenivorans
AK-01]
Length=80
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/68 (43%), Positives = 39/68 (58%), Gaps = 3/68 (4%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITIT-KNGAPAAVLVGADEWESLQETLYWLAQPG 59
M L + + L +D + + D I IT K G AVL+ D+W S+QETLY L+ PG
Sbjct 1 MPTLSATEARANLYRLIDETTESHDPILITGKRGN--AVLISEDDWRSIQETLYLLSIPG 58
Query 60 IRESIAEA 67
+RESI E
Sbjct 59 MRESILEG 66
>gi|325298916|ref|YP_004258833.1| prevent-host-death family protein [Bacteroides salanitronis DSM
18170]
gi|324318469|gb|ADY36360.1| prevent-host-death family protein [Bacteroides salanitronis DSM
18170]
Length=104
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/81 (26%), Positives = 42/81 (52%), Gaps = 0/81 (0%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
MR + ++ L ++D+V D + + + V++ DE+ SL+ET Y ++ P
Sbjct 9 MRTANYTDLRTNLKSYIDSVIDDCDTVVVNRGNGKGVVMISLDEYNSLKETEYIMSSPET 68
Query 61 RESIAEADADIASGRTYGEDE 81
E+I + + DI +G ++E
Sbjct 69 MEAIRKGEEDIKNGNCISQNE 89
>gi|298530053|ref|ZP_07017455.1| prevent-host-death family protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509427|gb|EFI33331.1| prevent-host-death family protein [Desulfonatronospira thiodismutans
ASO3-1]
Length=80
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (45%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITIT-KNGAPAAVLVGADEWESLQETLYWLAQPG 59
M L + + KL +D ++ + I IT K G+ AVLV D+W S+QETLY L PG
Sbjct 1 MPTLTATEARSKLYRLIDEAKTSHEPIVITGKRGS--AVLVSEDDWRSIQETLYLLNIPG 58
Query 60 IRESI 64
+RESI
Sbjct 59 MRESI 63
>gi|83699620|gb|ABC40716.1| antitoxin protein [Leifsonia xyli subsp. cynodontis]
Length=87
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (36%), Positives = 51/87 (59%), Gaps = 2/87 (2%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ + +S K KL+ V+ V +T D + I++ VL+ ++ +SLQE L WL+ P
Sbjct 1 MQTMSVSEAKDKLSNLVEGVEATHDAVVISREAG--RVLISPEDLDSLQEMLAWLSDPAH 58
Query 61 RESIAEADADIASGRTYGEDEIRAEFG 87
+AEA+ D+A+GR DE+RA+
Sbjct 59 AAEMAEAEEDVAAGRMLSLDEVRAQLA 85
>gi|148263387|ref|YP_001230093.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
gi|146396887|gb|ABQ25520.1| prevent-host-death family protein [Geobacter uraniireducens Rf4]
Length=94
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (30%), Positives = 47/88 (54%), Gaps = 6/88 (6%)
Query 3 ILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRE 62
I+PI+ K ++++ ++ + + IT+NG PA VL+ D+++ L + + +
Sbjct 10 IIPIAEFKTGISKWFKSLQKSGHPLIITQNGKPAGVLLSPDDYDDL------VYKKSFLD 63
Query 63 SIAEADADIASGRTYGEDEIRAEFGVPR 90
S+ +D SGRTY DEI+A R
Sbjct 64 SVGRGISDAESGRTYNTDEIKAALAARR 91
>gi|312128374|ref|YP_003993248.1| prevent-host-death family protein [Caldicellulosiruptor hydrothermalis
108]
gi|311778393|gb|ADQ07879.1| prevent-host-death family protein [Caldicellulosiruptor hydrothermalis
108]
Length=85
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 42/68 (62%), Gaps = 1/68 (1%)
Query 1 MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGI 60
M+ +P++ ++ + + ++ V + + I IT VL+ ++W ++QETLY L+ P +
Sbjct 1 MKTIPVTKVRQNIYKILEQVRISSEPIQITSKKG-NVVLISEEDWNAIQETLYLLSIPNL 59
Query 61 RESIAEAD 68
RESI EAD
Sbjct 60 RESILEAD 67
Lambda K H
0.314 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127811470620
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40