BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2872

Length=147
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610009|ref|NP_217388.1|  hypothetical protein Rv2872 [Mycoba...   296    9e-79
gi|340627865|ref|YP_004746317.1|  hypothetical protein MCAN_28941...   295    2e-78
gi|121638754|ref|YP_978978.1|  hypothetical protein BCG_2894 [Myc...   295    2e-78
gi|240171734|ref|ZP_04750393.1|  hypothetical protein MkanA1_2064...   225    2e-57
gi|297623624|ref|YP_003705058.1|  PIN domain-containing protein [...   140    6e-32
gi|88811999|ref|ZP_01127252.1|  hypothetical protein NB231_06401 ...   123    1e-26
gi|296130776|ref|YP_003638026.1|  PIN domain protein family prote...   116    1e-24
gi|116748338|ref|YP_845025.1|  PilT domain-containing protein [Sy...   113    1e-23
gi|284122509|ref|ZP_06386855.1|  PIN domain family protein [Candi...   108    3e-22
gi|340625313|ref|YP_004743765.1|  hypothetical protein MCAN_02841...   108    4e-22
gi|306774366|ref|ZP_07412703.1|  toxin [Mycobacterium tuberculosi...   106    1e-21
gi|253797202|ref|YP_003030203.1|  toxin [Mycobacterium tuberculos...   106    1e-21
gi|15607418|ref|NP_214791.1|  hypothetical protein Rv0277c [Mycob...   105    3e-21
gi|340625767|ref|YP_004744219.1|  hypothetical protein MCAN_07521...   104    4e-21
gi|15607889|ref|NP_215263.1|  hypothetical protein Rv0749 [Mycoba...   102    2e-20
gi|121636671|ref|YP_976894.1|  hypothetical protein BCG_0799 [Myc...   100    8e-20
gi|297623633|ref|YP_003705067.1|  PIN domain-containing protein [...  99.0    2e-19
gi|116624725|ref|YP_826881.1|  PilT domain-containing protein [Ca...  98.6    3e-19
gi|88810689|ref|ZP_01125946.1|  hypothetical protein NB231_16453 ...  97.4    7e-19
gi|308270136|emb|CBX26748.1|  hypothetical protein N47_A07770 [un...  93.6    9e-18
gi|289744472|ref|ZP_06503850.1|  conserved hypothetical protein [...  92.4    2e-17
gi|300780204|ref|ZP_07090060.1|  PilT domain protein [Corynebacte...  91.7    3e-17
gi|333991903|ref|YP_004524517.1|  PIN domain-containing protein f...  86.3    2e-15
gi|302542963|ref|ZP_07295305.1|  putative toxin-antitoxin system,...  85.9    2e-15
gi|320105317|ref|YP_004180907.1|  PIN domain-containing protein f...  84.3    5e-15
gi|240168912|ref|ZP_04747571.1|  hypothetical protein MkanA1_0634...  83.2    1e-14
gi|145221522|ref|YP_001132200.1|  PilT domain-containing protein ...  82.8    2e-14
gi|289756836|ref|ZP_06516214.1|  conserved hypothetical protein [...  78.2    4e-13
gi|240170675|ref|ZP_04749334.1|  PIN domain protein family protei...  76.3    2e-12
gi|297567544|ref|YP_003686516.1|  PIN domain-containing protein f...  75.9    2e-12
gi|294054235|ref|YP_003547893.1|  PIN domain-containing protein f...  75.5    2e-12
gi|229822546|ref|YP_002884072.1|  PIN domain-containing protein f...  73.9    7e-12
gi|322435687|ref|YP_004217899.1|  PIN domain protein family prote...  73.6    9e-12
gi|160898241|ref|YP_001563823.1|  PilT domain-containing protein ...  71.6    3e-11
gi|258593480|emb|CBE69819.1|  Conserved membrane protein [NC10 ba...  71.2    5e-11
gi|333990439|ref|YP_004523053.1|  hypothetical protein JDM601_179...  70.5    8e-11
gi|258593410|emb|CBE69749.1|  conserved protein of unknown functi...  69.7    1e-10
gi|307084750|ref|ZP_07493863.1|  toxin [Mycobacterium tuberculosi...  68.9    3e-10
gi|15841594|ref|NP_336631.1|  hypothetical protein MT2163 [Mycoba...  68.6    3e-10
gi|15609240|ref|NP_216619.1|  hypothetical protein Rv2103c [Mycob...  68.6    3e-10
gi|289758220|ref|ZP_06517598.1|  conserved hypothetical protein [...  68.2    4e-10
gi|340627115|ref|YP_004745567.1|  hypothetical protein MCAN_21291...  68.2    4e-10
gi|289573902|ref|ZP_06454129.1|  toxin [Mycobacterium tuberculosi...  67.8    5e-10
gi|15608382|ref|NP_215758.1|  hypothetical protein Rv1242 [Mycoba...  67.4    7e-10
gi|15610833|ref|NP_218214.1|  hypothetical protein Rv3697c [Mycob...  62.8    2e-08
gi|31794868|ref|NP_857361.1|  hypothetical protein Mb3723c [Mycob...  62.0    3e-08
gi|340628670|ref|YP_004747122.1|  hypothetical protein MCAN_37181...  62.0    3e-08
gi|289750699|ref|ZP_06510077.1|  conserved hypothetical protein [...  59.7    1e-07
gi|306805540|ref|ZP_07442208.1|  toxin [Mycobacterium tuberculosi...  59.7    1e-07
gi|147679127|ref|YP_001213342.1|  nucleic acid-binding protein [P...  59.3    2e-07


>gi|15610009|ref|NP_217388.1| hypothetical protein Rv2872 [Mycobacterium tuberculosis H37Rv]
 gi|15842413|ref|NP_337450.1| hypothetical protein MT2939 [Mycobacterium tuberculosis CDC1551]
 gi|31794049|ref|NP_856542.1| hypothetical protein Mb2897 [Mycobacterium bovis AF2122/97]
 75 more sequence titles
 Length=147

 Score =  296 bits (757),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP
Sbjct  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA
Sbjct  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147
            TWLSADRGFARFRRLRWRHPLDGQTHL
Sbjct  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147


>gi|340627865|ref|YP_004746317.1| hypothetical protein MCAN_28941 [Mycobacterium canettii CIPT 
140010059]
 gi|157382523|gb|ABV48756.1| Rv2872 [Mycobacterium canettii]
 gi|340006055|emb|CCC45225.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=147

 Score =  295 bits (754),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 146/147 (99%), Positives = 146/147 (99%), Gaps = 0/147 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            MLCVDVNVLVYAHRADLREH DYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP
Sbjct  1    MLCVDVNVLVYAHRADLREHTDYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA
Sbjct  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147
            TWLSADRGFARFRRLRWRHPLDGQTHL
Sbjct  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147


>gi|121638754|ref|YP_978978.1| hypothetical protein BCG_2894 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991246|ref|YP_002645935.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121494402|emb|CAL72883.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224774361|dbj|BAH27167.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602792|emb|CCC65470.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=147

 Score =  295 bits (754),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 146/147 (99%), Positives = 146/147 (99%), Gaps = 0/147 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP
Sbjct  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            TSPQDAWQAVD LLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA
Sbjct  61   TSPQDAWQAVDTLLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120

Query  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147
            TWLSADRGFARFRRLRWRHPLDGQTHL
Sbjct  121  TWLSADRGFARFRRLRWRHPLDGQTHL  147


>gi|240171734|ref|ZP_04750393.1| hypothetical protein MkanA1_20640 [Mycobacterium kansasii ATCC 
12478]
 gi|157382510|gb|ABV48746.1| Rv2872 [Mycobacterium kansasii ATCC 12478]
Length=143

 Score =  225 bits (574),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 120/142 (85%), Positives = 131/142 (93%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M CVDVNVLV AHRADLREH +YR +LERLAN DEPLGLPDSVLAGF+RVVTNRR+F EP
Sbjct  1    MHCVDVNVLVNAHRADLREHPNYRDVLERLANGDEPLGLPDSVLAGFVRVVTNRRIFVEP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            TS  DAWQAVDALLAAPAA+RL+PGERHW  FRQLA+D+DA+GNDIADA+LAAYALENNA
Sbjct  61   TSQPDAWQAVDALLAAPAAIRLKPGERHWTLFRQLAADIDASGNDIADAYLAAYALENNA  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
            TW+SADRGFARF RLRWRHPLD
Sbjct  121  TWVSADRGFARFGRLRWRHPLD  142


>gi|297623624|ref|YP_003705058.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164804|gb|ADI14515.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=144

 Score =  140 bits (353),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 72/142 (51%), Positives = 92/142 (65%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ +D+N LVYA R D  +H  Y G LE+L N D   GL D V +GFIRVVT+ RVF+ P
Sbjct  1    MILLDINPLVYAFRPDAPQHPAYVGWLEKLVNQDAAFGLADIVCSGFIRVVTHPRVFSPP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   DA + ++ + A P  + L PGERHW  F QL   V A GN + DA+LAA A+E+ +
Sbjct  61   SPLDDALEYLEDIRAQPNCVILAPGERHWRIFLQLCHAVGAKGNVVPDAYLAALAIESGS  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
               +ADRG ARF  LRWRHPLD
Sbjct  121  ELATADRGVARFPGLRWRHPLD  142


>gi|88811999|ref|ZP_01127252.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
 gi|88790883|gb|EAR21997.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
Length=145

 Score =  123 bits (308),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 66/141 (47%), Positives = 83/141 (59%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ +DVNVLVYAHR D  +H  YR  LE   N     G+ D VL+GFIRVVT+ RVF  P
Sbjct  1    MILMDVNVLVYAHREDTADHLAYRDWLEEQINGLGAYGVSDLVLSGFIRVVTHPRVFERP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            T    A   V  + + P A+ +RPG RHW  F +L     A GN + DA+ AA A+E   
Sbjct  61   TPLDRALAFVHQVRSQPQAVPIRPGPRHWAIFEKLVRLSKAEGNLVPDAYHAALAIEAGC  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
             W++ D+GF RF  LR RHP 
Sbjct  121  DWITTDKGFLRFPGLRARHPF  141


>gi|296130776|ref|YP_003638026.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
 gi|296022591|gb|ADG75827.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
Length=143

 Score =  116 bits (291),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 68/138 (50%), Positives = 83/138 (61%), Gaps = 0/138 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  DVNVLV A RAD   H   R  LE   +  EPLGL D+VL G +RV+T+ RVF  P
Sbjct  1    MILPDVNVLVGALRADSPRHDALRRWLEAAVDAPEPLGLTDAVLGGTVRVLTHPRVFARP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            T  + A   V  L A P  +R+ PG+RHW     L    DA GN +ADA  AA A+E+ A
Sbjct  61   TPLRTALDLVGDLRAHPGTVRVAPGDRHWEIVADLCRAADARGNLVADAQHAAVAVEHGA  120

Query  121  TWLSADRGFARFRRLRWR  138
            TW+S DR FARF  LRW+
Sbjct  121  TWVSQDRDFARFPGLRWQ  138


>gi|116748338|ref|YP_845025.1| PilT domain-containing protein [Syntrophobacter fumaroxidans 
MPOB]
 gi|116697402|gb|ABK16590.1| PIN domain family protein [Syntrophobacter fumaroxidans MPOB]
Length=144

 Score =  113 bits (282),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 62/144 (44%), Positives = 81/144 (57%), Gaps = 0/144 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ VDVN+L+YA   DL +HA  R  LE + +  E +GLP  V+  F+R+ TN R+F  P
Sbjct  1    MILVDVNLLLYAVNQDLPQHARSRTWLETVLSGSESVGLPWVVIRAFLRITTNARIFERP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             S + A   V+  LA P A  + PG+ HWM  R L  D    GN   DAH+AA A+E   
Sbjct  61   LSVERAVAYVEEWLAQPVATTVTPGKSHWMILRNLLLDSGTGGNLTTDAHIAALAIEYGH  120

Query  121  TWLSADRGFARFRRLRWRHPLDGQ  144
            T  S D  F RF+ LR  +PL  Q
Sbjct  121  TVYSTDNDFKRFQGLRHINPLAVQ  144


>gi|284122509|ref|ZP_06386855.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829353|gb|EFC33749.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
Length=143

 Score =  108 bits (269),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 58/134 (44%), Positives = 78/134 (59%), Gaps = 1/134 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D NVL++AHR ++ +HA+   LL  LA   +P GLP   L  F+RVVT+ RVFT P
Sbjct  1    MRALDTNVLIHAHRKEMAKHAEAGQLLRNLAEGTKPWGLPVFCLGEFLRVVTHHRVFTPP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            T+ Q+A  A+D LL +P    L PG+R+W  F    S   A GN + DA + A  LE+  
Sbjct  61   TTIQNALAALDGLLQSPTVRLLLPGDRYWSCFHNAISQGQATGNVVFDAQIVAVCLEHGI  120

Query  121  TWL-SADRGFARFR  133
             +L S DR   RF 
Sbjct  121  DFLISEDRELKRFE  134


>gi|340625313|ref|YP_004743765.1| hypothetical protein MCAN_02841 [Mycobacterium canettii CIPT 
140010059]
 gi|340003503|emb|CCC42624.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score =  108 bits (269),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 60/140 (43%), Positives = 82/140 (59%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D NVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   DA+  VDA+ A P  +   PG RH M  R+L  + DA+G+ I DA LAA A+E++ 
Sbjct  61   SPRADAFAFVDAVTAQPHHLPTSPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|306774366|ref|ZP_07412703.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|306974699|ref|ZP_07487360.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|307082408|ref|ZP_07491578.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308217200|gb|EFO76599.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|308356102|gb|EFP44953.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|308360056|gb|EFP48907.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=142

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 59/140 (43%), Positives = 83/140 (60%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +DVNVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   DA+  V+A+ A P  +   PG RH +  R+L  + DA+G+ I DA LAA A+E++ 
Sbjct  61   SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|253797202|ref|YP_003030203.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289552530|ref|ZP_06441740.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297632757|ref|ZP_06950537.1| toxin [Mycobacterium tuberculosis KZN 4207]
 gi|297729731|ref|ZP_06958849.1| toxin [Mycobacterium tuberculosis KZN R506]
 gi|313657057|ref|ZP_07813937.1| toxin [Mycobacterium tuberculosis KZN V2475]
 gi|253318705|gb|ACT23308.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289437162|gb|EFD19655.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328456989|gb|AEB02412.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=142

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 58/140 (42%), Positives = 82/140 (59%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +DVNVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   DA+  V+A+ A P  +   PG RH +  R+L  + DA+G+ I DA L A A+E++ 
Sbjct  61   SPRADAFAFVEAVTAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|15607418|ref|NP_214791.1| hypothetical protein Rv0277c [Mycobacterium tuberculosis H37Rv]
 gi|15839658|ref|NP_334695.1| hypothetical protein MT0289 [Mycobacterium tuberculosis CDC1551]
 gi|31791455|ref|NP_853948.1| hypothetical protein Mb0283c [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score =  105 bits (262),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 58/140 (42%), Positives = 82/140 (59%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +DVNVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLIDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   DA+  V+A+ A P  +   PG RH +  R+L  + DA+G+ I DA L A A+E++ 
Sbjct  61   SPRADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|340625767|ref|YP_004744219.1| hypothetical protein MCAN_07521 [Mycobacterium canettii CIPT 
140010059]
 gi|340003957|emb|CCC43092.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 58/140 (42%), Positives = 81/140 (58%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D NVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +    A+  +DA+ A P  +   PG RH M  R+L  + DA+G+ I DA LAA A+E++ 
Sbjct  61   SPRAAAFAFIDAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFTSVRHIRP  140


>gi|15607889|ref|NP_215263.1| hypothetical protein Rv0749 [Mycobacterium tuberculosis H37Rv]
 gi|15840162|ref|NP_335199.1| hypothetical protein MT0773 [Mycobacterium tuberculosis CDC1551]
 gi|31791935|ref|NP_854428.1| hypothetical protein Mb0770 [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score =  102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/140 (41%), Positives = 81/140 (58%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D NVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   +A+  V+A+ A P  +   PG RH M  R+L  + DA+G+ I DA LAA A+ ++ 
Sbjct  61   SPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|121636671|ref|YP_976894.1| hypothetical protein BCG_0799 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989143|ref|YP_002643830.1| hypothetical protein JTY_0769 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289442150|ref|ZP_06431894.1| toxin [Mycobacterium tuberculosis T46]
 10 more sequence titles
 Length=142

 Score =  100 bits (249),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 81/140 (58%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D NVL+ AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P
Sbjct  1    MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            +   +A+  V+A+ A P  +   PG RH +  R+L  + DA+G+ I DA LAA A+ ++ 
Sbjct  61   SPRAEAFAFVEAVTAQPHHLPTNPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVGHHC  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S DR FARF  +R   P
Sbjct  121  AVVSLDRDFARFASVRHIRP  140


>gi|297623633|ref|YP_003705067.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164813|gb|ADI14524.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=145

 Score = 99.0 bits (245),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 55/141 (40%), Positives = 74/141 (53%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ +D N+L+YAH     +H      L+   +    +GLP   L  F+R+ TN RVF  P
Sbjct  1    MILIDANLLIYAHVMGSPQHHAAHAWLDAQLSAGYRVGLPWPSLLAFLRLTTNPRVFERP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             +  +AW  V+A L+ P+     P   H    R L +   A  N I DAHLAA ALE+  
Sbjct  61   LTAAEAWAQVEAWLSVPSVWLPTPTAEHPKLLRDLVTQTGATANLIPDAHLAALALEHGL  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
            T  S D  F RF RL+WR+PL
Sbjct  121  TLCSTDGDFGRFPRLKWRNPL  141


>gi|116624725|ref|YP_826881.1| PilT domain-containing protein [Candidatus Solibacter usitatus 
Ellin6076]
 gi|116227887|gb|ABJ86596.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=142

 Score = 98.6 bits (244),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 55/142 (39%), Positives = 77/142 (55%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +D N+L+YA   D   H   R  LE+  + DEPLG   +V+  F+R+ T   +F +P
Sbjct  1    MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             SP  A+  V + LA PAA+ +  G RH     +L   +   GN  +DAHL A A+E NA
Sbjct  61   LSPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNA  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
               S D  FARF  + W +PL+
Sbjct  121  QLCSCDSDFARFSGVDWLNPLE  142


>gi|88810689|ref|ZP_01125946.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
 gi|88792319|gb|EAR23429.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
Length=144

 Score = 97.4 bits (241),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 54/144 (38%), Positives = 76/144 (53%), Gaps = 0/144 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  DVN+L+YA+  D   H+D +   E L + +EP+GLP +   GFIR++T+R V   P
Sbjct  1    MIVPDVNLLIYAYNTDAPHHSDAKAWWEGLLSSEEPVGLPWASALGFIRLMTHRAVLVMP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
              P  A + V +  +      L PG RH      L + +   G    D HLAA A+E+  
Sbjct  61   VEPSRAVEYVRSWHSRSNVSALEPGPRHLELLDGLFAALGTAGKLTTDTHLAALAIEHQC  120

Query  121  TWLSADRGFARFRRLRWRHPLDGQ  144
               S D  FARF  LRWR+PL  +
Sbjct  121  VLCSNDGDFARFPGLRWRNPLKAE  144


>gi|308270136|emb|CBX26748.1| hypothetical protein N47_A07770 [uncultured Desulfobacterium 
sp.]
Length=143

 Score = 93.6 bits (231),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 52/142 (37%), Positives = 73/142 (52%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ VD N+L+YA  +    H   R   +   +  EP+ L   VL+ FIR+ TN RVF  P
Sbjct  1    MILVDANILLYAEDSLSPLHQQARLWWDDQLSKSEPVCLCWPVLSAFIRIGTNPRVFEHP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V + L  P    ++P E+HW  F  +     A  N + DAHLAA A+EN  
Sbjct  61   LPLEQALTRVQSWLDQPCTRVIQPTEQHWAVFMMMLKGGQAVANLVTDAHLAALAIENGC  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
               S D  F+RF +L+W +PL 
Sbjct  121  DLASTDSDFSRFPKLKWINPLS  142


>gi|289744472|ref|ZP_06503850.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289685000|gb|EFD52488.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=131

 Score = 92.4 bits (228),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 74/129 (58%), Gaps = 0/129 (0%)

Query  12   AHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPTSPQDAWQAVD  71
            AHR D   H   R   +RL   D+P  +P+ V A F+R+ TNRR+F  P+   +A+  V+
Sbjct  1    AHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVE  60

Query  72   ALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNATWLSADRGFAR  131
            A+ A P  +   PG RH M  R+L  + DA+G+ I DA LAA A+ ++   +S DR FAR
Sbjct  61   AVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFAR  120

Query  132  FRRLRWRHP  140
            F  +R   P
Sbjct  121  FASVRHIRP  129


>gi|300780204|ref|ZP_07090060.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
 gi|300534314|gb|EFK55373.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
Length=145

 Score = 91.7 bits (226),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 52/143 (37%), Positives = 72/143 (51%), Gaps = 0/143 (0%)

Query  2    LCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
            + +D NVL+YA   +    A+    L+      E +G P   L  F R+ TN  +F  P 
Sbjct  1    MIIDANVLIYASDENATHFAEASSWLDGALRGTERVGFPWICLLAFQRITTNPALFAMPL  60

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNAT  121
            +P  A   ++  L  P +   +PG +H    R L  D DA G  + DAHLAA A+E+  +
Sbjct  61   TPSRASDYIENWLKHPNSWVPQPGPQHASILRTLTVDSDARGTLVTDAHLAALAIEHGTS  120

Query  122  WLSADRGFARFRRLRWRHPLDGQ  144
              S D  FARF+ LRW  PLD Q
Sbjct  121  ICSFDSDFARFQGLRWFSPLDAQ  143


>gi|333991903|ref|YP_004524517.1| PIN domain-containing protein family protein [Mycobacterium sp. 
JDM601]
 gi|333487871|gb|AEF37263.1| PIN domain protein family protein [Mycobacterium sp. JDM601]
Length=143

 Score = 86.3 bits (212),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/143 (35%), Positives = 70/143 (49%), Gaps = 0/143 (0%)

Query  2    LCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
            + +D N+L+YA  AD + +      LE   N D  +GLP   +  F+R++T+ RV   P 
Sbjct  1    MLLDANLLLYAVDADSKHNPVAAAWLEETLNGDNRIGLPWQTIGAFLRIITHPRVTENPL  60

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNAT  121
             P +AW  V   LA P        E     +  + +  D  GN + DA LAA A+E+   
Sbjct  61   PPSEAWSYVADWLAVPVVWIPPATEATARVYAGICAQADVAGNLVPDAQLAALAIEHGVE  120

Query  122  WLSADRGFARFRRLRWRHPLDGQ  144
              SAD  F RF  LRW +PL  Q
Sbjct  121  LASADSDFQRFPGLRWFNPLTSQ  143


>gi|302542963|ref|ZP_07295305.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces hygroscopicus ATCC 53653]
 gi|302460581|gb|EFL23674.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces himastatinicus ATCC 53653]
Length=144

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 49/144 (35%), Positives = 75/144 (53%), Gaps = 1/144 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ VD N+LVYAHR+D   H+     ++ LA    P  LP   L  F  + T+ R++  P
Sbjct  1    MIAVDTNILVYAHRSDSPFHSAAAAQIKGLAEARAPWALPWPCLHEFFSIATHPRIYQPP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
            ++ + A   +DA L++P+ + L   + +W   RQ+  D    G  + D  +AA    +  
Sbjct  61   STAEQAIAQIDAWLSSPSVVLLSEADTYWPTLRQMLEDGKVAGPMVHDGRIAALCANSGV  120

Query  121  TWL-SADRGFARFRRLRWRHPLDG  143
              L SADR F+RF  L  R+PL G
Sbjct  121  RELWSADRDFSRFPALTTRNPLHG  144


>gi|320105317|ref|YP_004180907.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319923838|gb|ADV80913.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=145

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 47/141 (34%), Positives = 73/141 (52%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ +D N+L+YA+      H      +ER+ +  EP+ +P + +  F+R++T++ +    
Sbjct  1    MILLDANLLIYAYDEAAPHHKRSSKWIERIFSSREPVLIPVAAIMAFLRIMTHQALPGPR  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             S ++    VD   +         G  HW   RQ  +D  A  + + D+HLAA A+EN A
Sbjct  61   FSMEEGIGIVDEWFSLSHVSIAITGNEHWNYLRQTLTDGQARSSLVTDSHLAALAIENGA  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
            T  S DR FARF  LRW  PL
Sbjct  121  TLCSVDRDFARFPGLRWVDPL  141


>gi|240168912|ref|ZP_04747571.1| hypothetical protein MkanA1_06345 [Mycobacterium kansasii ATCC 
12478]
Length=143

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 53/142 (38%), Positives = 68/142 (48%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  DVN+L+YA      +H           N  E +GL    + GF+R+VTN R+ TEP
Sbjct  1    MIIPDVNLLLYAVITGFPQHRRAYAWWHDTVNSQERIGLTYPAVFGFLRIVTNARILTEP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             S  +A   V   L  P    L P  RH      L   +    N   D  LAAYA+E+NA
Sbjct  61   LSATEAVAYVRDWLTQPNVDLLIPSARHLDLALGLLEQLGTASNLTTDVQLAAYAIEHNA  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
               S+D  FARF  L W +PLD
Sbjct  121  EMHSSDADFARFAGLAWTNPLD  142


>gi|145221522|ref|YP_001132200.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145214008|gb|ABP43412.1| PIN domain family protein [Mycobacterium gilvum PYR-GCK]
Length=145

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 50/140 (36%), Positives = 71/140 (51%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA  +    H   R  L+   + ++ +GL    +  F+R+ T   +F  P
Sbjct  1    MRIVDANVLLYAVNSSSEHHDASRRWLDGALSGNDVVGLAWVPMLAFVRLTTKHGLFPSP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
             +P DA   +    +AP A+ + P  RH      L SDV   GN + DAHLAA ALE+ A
Sbjct  61   LTPDDAMARITDWCSAPGAVIVNPTARHADVLATLLSDVGTGGNLVNDAHLAALALEHRA  120

Query  121  TWLSADRGFARFRRLRWRHP  140
              +S D  F RF  ++W  P
Sbjct  121  RIVSYDNDFGRFSGVQWDVP  140


>gi|289756836|ref|ZP_06516214.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289712400|gb|EFD76412.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=104

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 42/102 (42%), Positives = 62/102 (61%), Gaps = 0/102 (0%)

Query  39   LPDSVLAGFIRVVTNRRVFTEPTSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASD  98
            +P+ V A F+R+ TNRR+F  P+   +A+  V+A+ A P  +   PG RH M  R+L  +
Sbjct  1    MPNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDE  60

Query  99   VDANGNDIADAHLAAYALENNATWLSADRGFARFRRLRWRHP  140
             DA+G+ I DA LAA A+ ++   +S DR FARF  +R   P
Sbjct  61   ADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRP  102


>gi|240170675|ref|ZP_04749334.1| PIN domain protein family protein [Mycobacterium kansasii ATCC 
12478]
Length=142

 Score = 76.3 bits (186),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 48/142 (34%), Positives = 67/142 (48%), Gaps = 0/142 (0%)

Query  2    LCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
            + VD N+L+YA       +      LE +   D  +GLP   +  F+R+ T+ RV   P 
Sbjct  1    MIVDANLLLYAVDESSAHNVAAASWLEEVLAGDSRVGLPWQTIGAFLRIATHPRVAENPL  60

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNAT  121
            S   AW+ V   LA P        E     + +L+  V+  GN + DA LAA A+E+   
Sbjct  61   SGPAAWRYVAEWLAVPVVWIPPATETTARVYARLSEQVEITGNLVPDAQLAALAVEHGVE  120

Query  122  WLSADRGFARFRRLRWRHPLDG  143
              SAD  F RF  LRW +PL  
Sbjct  121  LASADTDFMRFPGLRWMNPLSA  142


>gi|297567544|ref|YP_003686516.1| PIN domain-containing protein family protein [Meiothermus silvanus 
DSM 9946]
 gi|296851993|gb|ADH65008.1| PIN domain protein family protein [Meiothermus silvanus DSM 9946]
Length=143

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 48/142 (34%), Positives = 70/142 (50%), Gaps = 0/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  +DVNVL+YA R D  +H      L       E +G+P  V    +R+ T   +    
Sbjct  1    MYVLDVNVLIYAFRRDSPQHPACYAWLSGSLATGESVGVPSWVELAVLRINTLPSLGDLA  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               +D    +  L + P+   + PG +H   F  L   +   GND+ DA +AA A+E+ A
Sbjct  61   APLKDVLAFLYELRSHPSYQLVEPGPKHLPIFEDLCQRLGLRGNDLNDAFIAALAIEHGA  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
            T +S DRGFARF  +R   PL+
Sbjct  121  TLVSTDRGFARFPGVRRIDPLE  142


>gi|294054235|ref|YP_003547893.1| PIN domain-containing protein family protein [Coraliomargarita 
akajimensis DSM 45221]
 gi|293613568|gb|ADE53723.1| PIN domain protein family protein [Coraliomargarita akajimensis 
DSM 45221]
Length=142

 Score = 75.5 bits (184),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 44/141 (32%), Positives = 69/141 (49%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  D N+L+YAH    R+HA  +   E   +  E +G+P  V+  F R++T+ ++   P
Sbjct  1    MILPDANLLIYAHDHSSRDHATAKDWWETALSGSESIGIPWIVVLAFTRILTHPQICEAP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
                   + V+    +P    ++   R    F  L  D    GN   DA +AA+A E++A
Sbjct  61   LGVTQVRELVEQWFDSPQVRLIQTSNRALPVFFDLLEDAGMGGNLSTDALIAAHAREHSA  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
               S DR F RF  +RW +PL
Sbjct  121  VIYSCDRDFDRFMGIRWVNPL  141


>gi|229822546|ref|YP_002884072.1| PIN domain-containing protein family protein [Beutenbergia cavernae 
DSM 12333]
 gi|229568459|gb|ACQ82310.1| PIN domain protein family protein [Beutenbergia cavernae DSM 
12333]
Length=143

 Score = 73.9 bits (180),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 49/139 (36%), Positives = 66/139 (48%), Gaps = 0/139 (0%)

Query  2    LCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
            + VD NVL+YA       H   +  LE   +    +GLP   L  F R+ ++ R   +P 
Sbjct  1    MIVDANVLLYAVDTGSPFHRAAKEWLEEALSGPARVGLPWPSLLAFQRIASHPRAAAQPL  60

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNAT  121
            +P  AW  +   L A  A    PG+ H     +L +  D  GN + DAHLAA ALE+   
Sbjct  61   TPGAAWAFITEWLRADPAWIPTPGDGHAAILGRLLTAGDLRGNLVTDAHLAALALEHGVG  120

Query  122  WLSADRGFARFRRLRWRHP  140
              S D  FARF  L W +P
Sbjct  121  ICSFDSDFARFDGLTWHNP  139


>gi|322435687|ref|YP_004217899.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
 gi|321163414|gb|ADW69119.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
Length=143

 Score = 73.6 bits (179),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 53/142 (38%), Positives = 76/142 (54%), Gaps = 1/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLAND-DEPLGLPDSVLAGFIRVVTNRRVFTE  59
            M+ +D N+L+YA+ A    H   R  L+ + +D  E +G+P      F+R++TN  V   
Sbjct  1    MIVLDANLLLYAYTARSSFHQPARSYLDHIFSDTSESIGIPIQCATAFLRLITNPAVTGA  60

Query  60   PTSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN  119
              +  DA   V+   A P    L PGE HW   + +  +  A G+ IADA +AA+ALE  
Sbjct  61   RIAMDDAIARVEEWQALPHVRILYPGEEHWQFLKTVTRNGHATGDLIADAAIAAFALEYG  120

Query  120  ATWLSADRGFARFRRLRWRHPL  141
            A   S DR FARF  +RW +PL
Sbjct  121  AVVHSNDRDFARFSSIRWHNPL  142


>gi|160898241|ref|YP_001563823.1| PilT domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363825|gb|ABX35438.1| PIN domain protein family protein [Delftia acidovorans SPH-1]
Length=145

 Score = 71.6 bits (174),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 50/131 (39%), Positives = 69/131 (53%), Gaps = 4/131 (3%)

Query  5    DVNVLVYAHRADLREHADYRGLLERLANDDEP---LGLPDSVLAGFIRVVTNRRVFTEPT  61
            DVN+LV A R+D   H+  R  LE+   D      L L   V+A F+R+VT+ ++F  PT
Sbjct  4    DVNLLVAASRSDHPHHSVARDWLEQAMADASQGVLLKLQPMVVASFLRLVTHPKIFVNPT  63

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNAT  121
               +A + +DALLA+P   +   G   W A RQL +D     ND+ DA LAA A+     
Sbjct  64   PMAEALRFIDALLASPGVEQAVLGAE-WPALRQLCADKALAANDVPDAWLAAAAIHQGEH  122

Query  122  WLSADRGFARF  132
             +S D  F R 
Sbjct  123  VVSFDADFKRL  133


>gi|258593480|emb|CBE69819.1| Conserved membrane protein [NC10 bacterium 'Dutch sediment']
Length=144

 Score = 71.2 bits (173),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 46/141 (33%), Positives = 68/141 (49%), Gaps = 1/141 (0%)

Query  3    CVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPTS  62
             VDVNVL+YA      +H +    +E  A D +   +  S L  ++R+ T  R+F  P S
Sbjct  4    SVDVNVLLYASDTSSPKHPEAIRFMEERAFDPDLFCIAWSTLIAYLRIATYPRIFARPLS  63

Query  63   PQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNATW  122
            P DA   V++LL+ P    L  GE     +R + +     GN + DAHLA    ++    
Sbjct  64   PSDALGNVESLLSLPRVRTLSEGEDFLDGYRGVTAHFPVRGNLVPDAHLATLLQQHGVGR  123

Query  123  L-SADRGFARFRRLRWRHPLD  142
            L +ADR F +F  L    P +
Sbjct  124  LYTADRDFRKFDFLEVVDPFE  144


>gi|333990439|ref|YP_004523053.1| hypothetical protein JDM601_1799 [Mycobacterium sp. JDM601]
 gi|333486407|gb|AEF35799.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=143

 Score = 70.5 bits (171),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 50/142 (36%), Positives = 68/142 (48%), Gaps = 1/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+R  +  + +G     L  F+R+ T   +F  P
Sbjct  1    MKIVDANVLLYAVNTAAEHHDASLRWLDRALSGADTVGFAWVPLLAFVRLSTKEGLFPHP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
              P+DA   V    AA +A+ + P  RH      L + V A GN + DAHLAA A+E+  
Sbjct  61   LRPEDAVDRVAEWTAASSAVVVNPTPRHADILTGLLARVGAGGNLVNDAHLAALAIEHRG  120

Query  121  TWLSADRGFARFRRLRWRHPLD  142
              +S D  F RF  +RW  P D
Sbjct  121  GIVSYDADFGRF-GIRWDRPDD  141


>gi|258593410|emb|CBE69749.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=144

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 47/142 (34%), Positives = 64/142 (46%), Gaps = 1/142 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+ VD N+LVYAHR D   H      +  LA    P  +P   L  F+ +VT+  ++   
Sbjct  1    MIAVDTNLLVYAHREDSPWHTAAYARIAELAESRAPWAIPWPCLHEFLAIVTHPTIYAPA  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYA-LENN  119
            T    A   VDA L +P+   L     +W+  R         G  + DAH+AA   L   
Sbjct  61   TPLAIALDQVDAWLESPSLTLLTEMSGYWIQLRHAIQKGQIAGPQVHDAHIAALCRLHGV  120

Query  120  ATWLSADRGFARFRRLRWRHPL  141
                +ADR F RF  L  R+PL
Sbjct  121  RELWTADRHFGRFPDLPVRNPL  142


>gi|307084750|ref|ZP_07493863.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|308365680|gb|EFP54531.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=143

 Score = 68.9 bits (167),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  TWLSADRGFARFRRLRWRHP  140
            + +S D  F RF  +RW  P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|15841594|ref|NP_336631.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
 gi|13881843|gb|AAK46445.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
Length=145

 Score = 68.6 bits (166),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  2    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  61

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  62   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  121

Query  121  TWLSADRGFARFRRLRWRHP  140
            + +S D  F RF  +RW  P
Sbjct  122  SIVSYDSDFGRFEGVRWDQP  141


>gi|15609240|ref|NP_216619.1| hypothetical protein Rv2103c [Mycobacterium tuberculosis H37Rv]
 gi|31793285|ref|NP_855778.1| hypothetical protein Mb2129c [Mycobacterium bovis AF2122/97]
 gi|121637987|ref|YP_978211.1| hypothetical protein BCG_2122c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 Length=144

 Score = 68.6 bits (166),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  TWLSADRGFARFRRLRWRHP  140
            + +S D  F RF  +RW  P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|289758220|ref|ZP_06517598.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294997046|ref|ZP_06802737.1| hypothetical protein Mtub2_21708 [Mycobacterium tuberculosis 
210]
 gi|289713784|gb|EFD77796.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326903715|gb|EGE50648.1| toxin [Mycobacterium tuberculosis W-148]
 gi|339295024|gb|AEJ47135.1| hypothetical protein CCDC5079_1945 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298648|gb|AEJ50758.1| hypothetical protein CCDC5180_1921 [Mycobacterium tuberculosis 
CCDC5180]
Length=144

 Score = 68.2 bits (165),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MKIVDANVLLYAVNTASEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  TWLSADRGFARFRRLRWRHP  140
            + +S D  F RF  +RW  P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|340627115|ref|YP_004745567.1| hypothetical protein MCAN_21291 [Mycobacterium canettii CIPT 
140010059]
 gi|340005305|emb|CCC44461.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=144

 Score = 68.2 bits (165),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 46/140 (33%), Positives = 67/140 (48%), Gaps = 0/140 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M  VD NVL+YA       H      L+   +  + +G     L  F+R+ T   +F  P
Sbjct  1    MKIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLSFVRLATKVGLFPRP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
               + A   V   LAAP+A+ + P  RH     ++ + V    N + DAHLAA A+E+ A
Sbjct  61   LPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHRA  120

Query  121  TWLSADRGFARFRRLRWRHP  140
            + +S D  F RF  +RW  P
Sbjct  121  SIVSYDSDFGRFAGVRWDQP  140


>gi|289573902|ref|ZP_06454129.1| toxin [Mycobacterium tuberculosis K85]
 gi|289538333|gb|EFD42911.1| toxin [Mycobacterium tuberculosis K85]
Length=143

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 45/141 (32%), Positives = 62/141 (44%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  D+N+L+YA      +H       +   N    +GL    L GF+R+ T+ RV   P
Sbjct  1    MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
                DA   V   L+ P    L  G RH      L   +    +   D  LAAY +E +A
Sbjct  61   LPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHRTTDVQLAAYGIEYDA  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
               S+D  FARF  L+W  PL
Sbjct  121  EIHSSDTDFARFADLKWTDPL  141


>gi|15608382|ref|NP_215758.1| hypothetical protein Rv1242 [Mycobacterium tuberculosis H37Rv]
 gi|15840687|ref|NP_335724.1| hypothetical protein MT1280 [Mycobacterium tuberculosis CDC1551]
 gi|31792435|ref|NP_854928.1| hypothetical protein Mb1274 [Mycobacterium bovis AF2122/97]
 79 more sequence titles
 Length=143

 Score = 67.4 bits (163),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 45/141 (32%), Positives = 62/141 (44%), Gaps = 0/141 (0%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  D+N+L+YA      +H       +   N    +GL    L GF+R+ T+ RV   P
Sbjct  1    MIIPDINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
                DA   V   L+ P    L  G RH      L   +    +   D  LAAY +E +A
Sbjct  61   LPTADAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAAYGIEYDA  120

Query  121  TWLSADRGFARFRRLRWRHPL  141
               S+D  FARF  L+W  PL
Sbjct  121  EIHSSDTDFARFADLKWTDPL  141


>gi|15610833|ref|NP_218214.1| hypothetical protein Rv3697c [Mycobacterium tuberculosis H37Rv]
 gi|15843315|ref|NP_338352.1| hypothetical protein MT3799 [Mycobacterium tuberculosis CDC1551]
 gi|148663560|ref|YP_001285083.1| hypothetical protein MRA_3732 [Mycobacterium tuberculosis H37Ra]
 62 more sequence titles
 Length=145

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  TWLSADRGFARFRRLRWRHPLDG  143
            T  S DR F +F  +R R P  G
Sbjct  123  TIWSHDRDFRKFEGIRIRDPFSG  145


>gi|31794868|ref|NP_857361.1| hypothetical protein Mb3723c [Mycobacterium bovis AF2122/97]
 gi|121639611|ref|YP_979835.1| hypothetical protein BCG_3756c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992107|ref|YP_002646796.1| hypothetical protein JTY_3757 [Mycobacterium bovis BCG str. Tokyo 
172]
 10 more sequence titles
 Length=145

 Score = 62.0 bits (149),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLARPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  TWLSADRGFARFRRLRWRHPLDG  143
            T  S DR F +F  +R R P  G
Sbjct  123  TIWSHDRDFRKFEGIRIRDPFSG  145


>gi|340628670|ref|YP_004747122.1| hypothetical protein MCAN_37181 [Mycobacterium canettii CIPT 
140010059]
 gi|340006860|emb|CCC46049.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=145

 Score = 62.0 bits (149),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  TWLSADRGFARFRRLRWRHPLDG  143
            T  S DR F +F  +R R P  G
Sbjct  123  TIWSHDRDFRKFEGIRIRDPFAG  145


>gi|289750699|ref|ZP_06510077.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691286|gb|EFD58715.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=136

 Score = 59.7 bits (143),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 51/97 (53%), Gaps = 0/97 (0%)

Query  44   LAGFIRVVTNRRVFTEPTSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANG  103
            L  F+R+ T   +F  P   + A   V   LAAP+A+ + P  RH     ++ + V    
Sbjct  36   LLAFVRLATKVGLFPRPLPREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGA  95

Query  104  NDIADAHLAAYALENNATWLSADRGFARFRRLRWRHP  140
            N + DAHLAA A+E+ A+ +S D  F RF  +RW  P
Sbjct  96   NLVNDAHLAALAVEHRASIVSYDSDFGRFEGVRWDQP  132


>gi|306805540|ref|ZP_07442208.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|306969936|ref|ZP_07482597.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308347839|gb|EFP36690.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|308352492|gb|EFP41343.1| toxin [Mycobacterium tuberculosis SUMu009]
Length=145

 Score = 59.7 bits (143),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 45/143 (32%), Positives = 69/143 (49%), Gaps = 3/143 (2%)

Query  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61
              DV+VLV+A HRA    H   + L+ER       + L   V  G++ VVT+  +   P 
Sbjct  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLWVVTHPTLLGAPL  62

Query  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122

Query  121  TWLSADRGFARFRRLRWRHPLDG  143
            T  S DR F +F  +R R P  G
Sbjct  123  TIWSHDRDFRKFEGIRIRDPFSG  145


>gi|147679127|ref|YP_001213342.1| nucleic acid-binding protein [Pelotomaculum thermopropionicum 
SI]
 gi|146275224|dbj|BAF60973.1| predicted nucleic acid-binding protein [Pelotomaculum thermopropionicum 
SI]
Length=145

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 42/142 (30%), Positives = 66/142 (47%), Gaps = 6/142 (4%)

Query  1    MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP  60
            M+  D NVLVYA   D  +H   R  +E +   +    LP  VL  F  +VT+ R  T P
Sbjct  1    MILTDTNVLVYAINTDAPQHTASRKFVEAVQQKNIDSVLPVQVLLEFYAIVTDHRRVTRP  60

Query  61   TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA  120
              P+ AW+ V+AL A      +  G + +   ++++  +   G DI DA+L A       
Sbjct  61   LEPETAWKQVNALRAIFPV--IDGGLKSFDLLKEIS--LKTKGADIFDAYLVAQMKACGV  116

Query  121  TWLSA--DRGFARFRRLRWRHP  140
            + L     + F+RF  +  + P
Sbjct  117  SLLCTYNIKDFSRFEGILAQTP  138



Lambda     K      H
   0.324    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131150363096


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40