BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2879c
Length=189
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610016|ref|NP_217395.1| hypothetical protein Rv2879c [Mycob... 375 2e-102
gi|289444435|ref|ZP_06434179.1| cfr family radical SAM enzyme [M... 375 2e-102
gi|15842421|ref|NP_337458.1| ribosomal RNA large subunit methylt... 375 2e-102
gi|148662723|ref|YP_001284246.1| hypothetical protein MRA_2904 [... 374 3e-102
gi|289571070|ref|ZP_06451297.1| conserved hypothetical protein [... 372 1e-101
gi|183981843|ref|YP_001850134.1| hypothetical protein MMAR_1830 ... 345 3e-93
gi|118617647|ref|YP_905979.1| hypothetical protein MUL_2078 [Myc... 342 1e-92
gi|41409041|ref|NP_961877.1| hypothetical protein MAP2943c [Myco... 340 4e-92
gi|296171525|ref|ZP_06852789.1| cfr family radical SAM enzyme [M... 338 2e-91
gi|254776158|ref|ZP_05217674.1| hypothetical protein MaviaA2_160... 337 7e-91
gi|342858274|ref|ZP_08714929.1| ribosomal RNA large subunit meth... 336 8e-91
gi|118472101|ref|YP_886882.1| ribosomal RNA large subunit methyl... 333 9e-90
gi|240171730|ref|ZP_04750389.1| hypothetical protein MkanA1_2062... 332 2e-89
gi|254819036|ref|ZP_05224037.1| hypothetical protein MintA_03871... 330 5e-89
gi|333991237|ref|YP_004523851.1| hypothetical protein JDM601_259... 328 2e-88
gi|120403214|ref|YP_953043.1| ribosomal RNA large subunit methyl... 327 3e-88
gi|145224701|ref|YP_001135379.1| ribosomal RNA large subunit met... 324 3e-87
gi|315445031|ref|YP_004077910.1| 23S rRNA m(2)A-2503 methyltrans... 324 4e-87
gi|169630257|ref|YP_001703906.1| ribosomal RNA large subunit met... 310 5e-83
gi|312139245|ref|YP_004006581.1| radical sam protein [Rhodococcu... 310 8e-83
gi|325673450|ref|ZP_08153141.1| cfr family radical SAM enzyme [R... 309 1e-82
gi|108798974|ref|YP_639171.1| ribosomal RNA large subunit methyl... 308 2e-82
gi|111023545|ref|YP_706517.1| ribosomal RNA large subunit methyl... 305 2e-81
gi|226366029|ref|YP_002783812.1| ribosomal RNA large subunit met... 305 2e-81
gi|262202048|ref|YP_003273256.1| radical SAM protein [Gordonia b... 304 3e-81
gi|343926733|ref|ZP_08766230.1| ribosomal RNA large subunit meth... 304 3e-81
gi|326382905|ref|ZP_08204595.1| ribosomal RNA large subunit meth... 302 2e-80
gi|229491476|ref|ZP_04385300.1| radical SAM enzyme, Cfr family [... 297 6e-79
gi|226306037|ref|YP_002765997.1| rRNA methyltransferase [Rhodoco... 296 9e-79
gi|54026096|ref|YP_120338.1| ribosomal RNA large subunit methylt... 293 9e-78
gi|337291022|ref|YP_004630043.1| hypothetical protein CULC22_014... 293 9e-78
gi|257055048|ref|YP_003132880.1| ribosomal RNA large subunit met... 293 1e-77
gi|300858724|ref|YP_003783707.1| hypothetical protein cpfrc_0130... 292 2e-77
gi|38234081|ref|NP_939848.1| ribosomal RNA large subunit methylt... 292 2e-77
gi|296139393|ref|YP_003646636.1| radical SAM enzyme, Cfr family ... 290 5e-77
gi|334564570|ref|ZP_08517561.1| ribosomal RNA large subunit meth... 290 8e-77
gi|333919256|ref|YP_004492837.1| ribosomal RNA large subunit met... 288 2e-76
gi|258652388|ref|YP_003201544.1| ribosomal RNA large subunit met... 287 5e-76
gi|145295923|ref|YP_001138744.1| ribosomal RNA large subunit met... 287 6e-76
gi|302525208|ref|ZP_07277550.1| ribosomal RNA large subunit meth... 287 6e-76
gi|19553223|ref|NP_601225.1| ribosomal RNA large subunit methylt... 287 6e-76
gi|300783906|ref|YP_003764197.1| ribosomal RNA large subunit met... 286 1e-75
gi|225021120|ref|ZP_03710312.1| hypothetical protein CORMATOL_01... 285 2e-75
gi|213964408|ref|ZP_03392608.1| radical SAM enzyme, Cfr family [... 285 3e-75
gi|305680861|ref|ZP_07403668.1| 23S rRNA m2A2503 methyltransfera... 285 3e-75
gi|259507523|ref|ZP_05750423.1| Cfr family radical SAM enzyme [C... 284 5e-75
gi|25028463|ref|NP_738517.1| hypothetical protein CE1907 [Coryne... 284 5e-75
gi|172040504|ref|YP_001800218.1| hypothetical protein cur_0824 [... 284 5e-75
gi|256379897|ref|YP_003103557.1| ribosomal RNA large subunit met... 282 1e-74
gi|296393255|ref|YP_003658139.1| radical SAM enzyme, Cfr family ... 282 1e-74
>gi|15610016|ref|NP_217395.1| hypothetical protein Rv2879c [Mycobacterium tuberculosis H37Rv]
gi|1403399|emb|CAA98355.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=189
Score = 375 bits (963), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL
Sbjct 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
Query 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK
Sbjct 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
Query 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA
Sbjct 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
Query 181 CGQLAAVGG 189
CGQLAAVGG
Sbjct 181 CGQLAAVGG 189
>gi|289444435|ref|ZP_06434179.1| cfr family radical SAM enzyme [Mycobacterium tuberculosis T46]
gi|289751545|ref|ZP_06510923.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289417354|gb|EFD14594.1| cfr family radical SAM enzyme [Mycobacterium tuberculosis T46]
gi|289692132|gb|EFD59561.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=364
Score = 375 bits (962), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH
Sbjct 177 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR
Sbjct 237 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC
Sbjct 297 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAAVGG
Sbjct 357 GQLAAVGG 364
>gi|15842421|ref|NP_337458.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
tuberculosis CDC1551]
gi|31794056|ref|NP_856549.1| hypothetical protein Mb2904c [Mycobacterium bovis AF2122/97]
gi|121638761|ref|YP_978985.1| hypothetical protein BCG_2901c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
62 more sequence titles
Length=364
Score = 375 bits (962), Expect = 2e-102, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH
Sbjct 177 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR
Sbjct 237 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC
Sbjct 297 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAAVGG
Sbjct 357 GQLAAVGG 364
>gi|148662723|ref|YP_001284246.1| hypothetical protein MRA_2904 [Mycobacterium tuberculosis H37Ra]
gi|148506875|gb|ABQ74684.1| hypothetical protein MRA_2904 [Mycobacterium tuberculosis H37Ra]
Length=195
Score = 374 bits (961), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL
Sbjct 7 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 66
Query 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK
Sbjct 67 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 126
Query 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA
Sbjct 127 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 186
Query 181 CGQLAAVGG 189
CGQLAAVGG
Sbjct 187 CGQLAAVGG 195
>gi|289571070|ref|ZP_06451297.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544824|gb|EFD48472.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=189
Score = 372 bits (956), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH
Sbjct 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR
Sbjct 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC
Sbjct 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
Query 182 GQLAAVGG 189
GQLAAVGG
Sbjct 182 GQLAAVGG 189
>gi|183981843|ref|YP_001850134.1| hypothetical protein MMAR_1830 [Mycobacterium marinum M]
gi|205829814|sp|B2HJP3.1|RLMN_MYCMM RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|183175169|gb|ACC40279.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=364
Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/188 (91%), Positives = 177/188 (95%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARVLAAV+RIT PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYARVLAAVRRITEPPPMGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+ISEAL+AA YYA VTGRRVS+EYALIR+VNDQPWRADLLGKR
Sbjct 237 APDDELRDTLVPVNNRWKISEALEAAHYYAEVTGRRVSVEYALIREVNDQPWRADLLGKR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGSDWDASPKPVEREFVKRVRA+GVSCTVRDTRGREISAAC
Sbjct 297 LHRALGPLVHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAQGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAA GG
Sbjct 357 GQLAAEGG 364
>gi|118617647|ref|YP_905979.1| hypothetical protein MUL_2078 [Mycobacterium ulcerans Agy99]
gi|205829818|sp|A0PQ89.1|RLMN_MYCUA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|118569757|gb|ABL04508.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=364
Score = 342 bits (878), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/188 (90%), Positives = 177/188 (95%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARVLAAV+RIT PP+GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYARVLAAVRRITEPPPTGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+ISEAL+AA YYA VTGRRVS+EYALIR+VNDQPWRADLLGKR
Sbjct 237 APDDELRDTLVPVNNRWKISEALEAAHYYAEVTGRRVSVEYALIREVNDQPWRADLLGKR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPL HVNLIPLNPTPGSDWDASPKPVEREFVKRVRA+GVSCTVRDTRGREISAAC
Sbjct 297 LHGALGPLVHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAQGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAA GG
Sbjct 357 GQLAAEGG 364
>gi|41409041|ref|NP_961877.1| hypothetical protein MAP2943c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81571119|sp|Q73VR8.1|RLMN_MYCPA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|41397400|gb|AAS05260.1| hypothetical protein MAP_2943c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459070|gb|EGO38020.1| 23S rRNA m2A2503 methyltransferase [Mycobacterium avium subsp.
paratuberculosis S397]
Length=364
Score = 340 bits (873), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/188 (90%), Positives = 177/188 (95%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RI A PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYARVVAAVRRIVAAPPQGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+I+EALDAARYYA+VTGRRVS+EYALIRDVNDQPWRADLLG+R
Sbjct 237 APDDELRDTLVPVNNRWKIAEALDAARYYADVTGRRVSVEYALIRDVNDQPWRADLLGRR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGS WDASPKPVEREFV+RVRA GVSCTVRDTRGREISAAC
Sbjct 297 LHRALGPLVHVNLIPLNPTPGSQWDASPKPVEREFVRRVRAAGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAA GG
Sbjct 357 GQLAAEGG 364
>gi|296171525|ref|ZP_06852789.1| cfr family radical SAM enzyme [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894087|gb|EFG73848.1| cfr family radical SAM enzyme [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=367
Score = 338 bits (867), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/188 (89%), Positives = 176/188 (94%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RIT PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 180 GEPLANYARVVAAVRRITEPPPHGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 239
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+I EALDAARYYA+VTGRRVS+EYALIRDVNDQPWRADLLGKR
Sbjct 240 APDDELRDTLVPVNNRWKIDEALDAARYYADVTGRRVSVEYALIRDVNDQPWRADLLGKR 299
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGS+WDASPK EREFV+RVRA+GVSCTVRDTRGREISAAC
Sbjct 300 LHRALGPLVHVNLIPLNPTPGSEWDASPKAAEREFVRRVRAQGVSCTVRDTRGREISAAC 359
Query 182 GQLAAVGG 189
GQLAA GG
Sbjct 360 GQLAAEGG 367
>gi|254776158|ref|ZP_05217674.1| hypothetical protein MaviaA2_16010 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=364
Score = 337 bits (863), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/188 (89%), Positives = 175/188 (94%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RI A PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYARVVAAVRRIVAAPPQGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+I+EALDAARYYA+VTGRRVS+EYALIRDVNDQPWRADLLG+R
Sbjct 237 APDDELRDTLVPVNNRWKIAEALDAARYYADVTGRRVSVEYALIRDVNDQPWRADLLGQR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGS WDASPKPVEREFV+RVRA GVSCTVRDTRGREISAAC
Sbjct 297 LHRALGPLVHVNLIPLNPTPGSQWDASPKPVEREFVRRVRAAGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLA G
Sbjct 357 GQLAFEKG 364
>gi|342858274|ref|ZP_08714929.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
colombiense CECT 3035]
gi|342133978|gb|EGT87158.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
colombiense CECT 3035]
Length=364
Score = 336 bits (862), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 166/188 (89%), Positives = 176/188 (94%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RI A PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYARVVAAVRRIIAAPPHGFGISARSVTVSTVGLAPAIRTLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+I+EALDAARYYA+VTGRRVS+EYALIRDVNDQPWRADLLG+R
Sbjct 237 APDDELRDTLVPVNNRWKITEALDAARYYADVTGRRVSVEYALIRDVNDQPWRADLLGQR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGS+WDASPK VEREFV+RVR KGVSCTVRDTRGREISAAC
Sbjct 297 LHRALGPLVHVNLIPLNPTPGSEWDASPKAVEREFVRRVRGKGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAA G
Sbjct 357 GQLAAERG 364
>gi|118472101|ref|YP_886882.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
smegmatis str. MC2 155]
gi|205829815|sp|A0QVE4.1|RLMN_MYCS2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|118173388|gb|ABK74284.1| radical SAM enzyme, Cfr family protein [Mycobacterium smegmatis
str. MC2 155]
Length=372
Score = 333 bits (853), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 162/187 (87%), Positives = 173/187 (93%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVL AV+RI A PP+GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 186 GEPLANYNRVLGAVRRIIAAPPNGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 245
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW++SE LDAARYYA+ TGRRVSIEYALIRDVNDQPWRADLLGK+
Sbjct 246 APDDELRDTLVPVNNRWKVSEVLDAARYYADTTGRRVSIEYALIRDVNDQPWRADLLGKK 305
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPLAHVN+IPLNPTPGS+WDASPKP EREFVKRVR +GVSCTVRDTRGREI+AAC
Sbjct 306 LHGALGPLAHVNVIPLNPTPGSEWDASPKPAEREFVKRVRERGVSCTVRDTRGREIAAAC 365
Query 182 GQLAAVG 188
GQLAA G
Sbjct 366 GQLAAEG 372
>gi|240171730|ref|ZP_04750389.1| hypothetical protein MkanA1_20620 [Mycobacterium kansasii ATCC
12478]
Length=364
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/188 (88%), Positives = 174/188 (93%), Gaps = 0/188 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY+RV+AAV+RIT PP GFGISAR+VTVSTVGLAPAIR LAD RLGVTLALSLH
Sbjct 177 GEPLANYSRVVAAVRRITEPPPCGFGISARSVTVSTVGLAPAIRKLADERLGVTLALSLH 236
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW++ EALDAARYYA VTGRRVS+EYALIR VNDQ WRADLLG+R
Sbjct 237 APDDELRDTLVPVNNRWKVDEALDAARYYAEVTGRRVSVEYALIRGVNDQRWRADLLGRR 296
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGSDWDASPKPVER+FVK VRA+GVSCTVRDTRGREISAAC
Sbjct 297 LHRALGPLVHVNLIPLNPTPGSDWDASPKPVERDFVKHVRAQGVSCTVRDTRGREISAAC 356
Query 182 GQLAAVGG 189
GQLAA GG
Sbjct 357 GQLAAGGG 364
>gi|254819036|ref|ZP_05224037.1| hypothetical protein MintA_03871 [Mycobacterium intracellulare
ATCC 13950]
Length=367
Score = 330 bits (847), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/184 (89%), Positives = 173/184 (95%), Gaps = 0/184 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RI A PP GFGISAR+VTVSTVGLAPAIR LAD L VTLALSLH
Sbjct 180 GEPLANYARVVAAVRRIIAAPPHGFGISARSVTVSTVGLAPAIRKLADEGLAVTLALSLH 239
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW+I+EALDAARYYA+VTGRRVS+EYALIRDVNDQPWRADLLG+R
Sbjct 240 APDDELRDTLVPVNNRWKIAEALDAARYYADVTGRRVSVEYALIRDVNDQPWRADLLGQR 299
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LGPL HVNLIPLNPTPGS+WDASPK VEREFV+RVRAKGVSCTVRDTRGREISAAC
Sbjct 300 LHRALGPLVHVNLIPLNPTPGSEWDASPKAVEREFVRRVRAKGVSCTVRDTRGREISAAC 359
Query 182 GQLA 185
GQLA
Sbjct 360 GQLA 363
>gi|333991237|ref|YP_004523851.1| hypothetical protein JDM601_2597 [Mycobacterium sp. JDM601]
gi|333487205|gb|AEF36597.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=369
Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/185 (87%), Positives = 173/185 (94%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANYARV+AAV+RIT PP+GFGISAR+VTVSTVGLAPAIR LAD LGVTLALSLH
Sbjct 182 GEPLANYARVVAAVRRITEPPPNGFGISARSVTVSTVGLAPAIRKLADEGLGVTLALSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW++ EALDAARYYA+VTGRRVSIEYALIRDVNDQPWRADLLG++
Sbjct 242 TPDDELRDTLVPVNNRWKVDEALDAARYYADVTGRRVSIEYALIRDVNDQPWRADLLGRK 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LHR LG L HVN+IPLNPTPGSDWDASPKPVEREFV+RVRA+GV CTVRDTRGREI+AAC
Sbjct 302 LHRALGQLVHVNVIPLNPTPGSDWDASPKPVEREFVRRVRAQGVECTVRDTRGREIAAAC 361
Query 182 GQLAA 186
GQLAA
Sbjct 362 GQLAA 366
>gi|120403214|ref|YP_953043.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
vanbaalenii PYR-1]
gi|205829819|sp|A1T787.1|RLMN_MYCVP RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|119956032|gb|ABM13037.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length=365
Score = 327 bits (839), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/187 (87%), Positives = 173/187 (93%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RITA P+GFGISAR+VTVSTVGLAPAIR LAD +L VTLALSLH
Sbjct 179 GEPLANYNRVVAAVRRITASSPNGFGISARSVTVSTVGLAPAIRKLADEKLNVTLALSLH 238
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW++ E LDAARYYA+VTGRRVSIEYALIRDVNDQPWRADLLGK+
Sbjct 239 TPDDELRDTLVPVNNRWKVDEVLDAARYYADVTGRRVSIEYALIRDVNDQPWRADLLGKK 298
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPL HVNLIPLNPTPGS+WDASPKPVEREFV+RVRAKGVSCTVRDTRGREI+AAC
Sbjct 299 LHGELGPLVHVNLIPLNPTPGSEWDASPKPVEREFVRRVRAKGVSCTVRDTRGREIAAAC 358
Query 182 GQLAAVG 188
GQLAA G
Sbjct 359 GQLAAEG 365
>gi|145224701|ref|YP_001135379.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
gilvum PYR-GCK]
gi|205829813|sp|A4TC75.1|RLMN_MYCGI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|145217187|gb|ABP46591.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium gilvum PYR-GCK]
Length=365
Score = 324 bits (831), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/187 (85%), Positives = 172/187 (92%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RITA P GFGISAR+VTVSTVGLAPAIR LAD +L VTLA+SLH
Sbjct 179 GEPLANYNRVVAAVRRITASSPHGFGISARSVTVSTVGLAPAIRKLADEKLNVTLAVSLH 238
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW++ E LDAARYYA++TGRRVSIEYALIRDVNDQPWRADLLG++
Sbjct 239 TPDDELRDTLVPVNNRWKVDEVLDAARYYADLTGRRVSIEYALIRDVNDQPWRADLLGRK 298
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPL HVNLIPLNPTPGS+WDASPKPVEREFV+RVRAKGVSCTVRDTRGREI+AAC
Sbjct 299 LHATLGPLVHVNLIPLNPTPGSEWDASPKPVEREFVRRVRAKGVSCTVRDTRGREIAAAC 358
Query 182 GQLAAVG 188
GQLAA G
Sbjct 359 GQLAAQG 365
>gi|315445031|ref|YP_004077910.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium sp. Spyr1]
gi|315263334|gb|ADU00076.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium sp. Spyr1]
Length=365
Score = 324 bits (830), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/187 (85%), Positives = 172/187 (92%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RITA P GFGISAR+VTVSTVGLAPAIR LAD +L VTLA+SLH
Sbjct 179 GEPLANYNRVVAAVRRITASSPHGFGISARSVTVSTVGLAPAIRKLADEKLNVTLAVSLH 238
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW++ E LDAARYYA++TGRRVSIEYALIRDVNDQPWRADLLG++
Sbjct 239 TPDDELRDTLVPVNNRWKVDEVLDAARYYADLTGRRVSIEYALIRDVNDQPWRADLLGRK 298
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPL HVNLIPLNPTPGS+WDASPKPVEREFV+RVRAKGVSCTVRDTRGREI+AAC
Sbjct 299 LHAKLGPLVHVNLIPLNPTPGSEWDASPKPVEREFVRRVRAKGVSCTVRDTRGREIAAAC 358
Query 182 GQLAAVG 188
GQLAA G
Sbjct 359 GQLAAQG 365
>gi|169630257|ref|YP_001703906.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
abscessus ATCC 19977]
gi|169242224|emb|CAM63252.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=373
Score = 310 bits (795), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/185 (83%), Positives = 164/185 (89%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVL +++ITA PP GFGIS R VTVSTVGLAPAIR LAD LGVTLA+SLH
Sbjct 186 GEPLANYNRVLTVLRKITAPPPEGFGISQRGVTVSTVGLAPAIRRLADEGLGVTLAVSLH 245
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVN RW ISE LDAARYYA+VTGRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 246 CPDDELRDTLVPVNTRWAISEVLDAARYYADVTGRRVSIEYALIRDVNDQPWRADMLGKK 305
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG + HVNLIPLNPTPGS WDASPKPVEREFV+RVR +GVSCTVRDTRGREI+AAC
Sbjct 306 LRKALGQMVHVNLIPLNPTPGSQWDASPKPVEREFVRRVREQGVSCTVRDTRGREIAAAC 365
Query 182 GQLAA 186
GQLAA
Sbjct 366 GQLAA 370
>gi|312139245|ref|YP_004006581.1| radical sam protein [Rhodococcus equi 103S]
gi|311888584|emb|CBH47896.1| radical SAM protein [Rhodococcus equi 103S]
Length=369
Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 149/185 (81%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G GIS RAVTVSTVGLAPAIR LAD + V LA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPSPDGLGISQRAVTVSTVGLAPAIRKLADEEMSVRLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVAEVLDAARYYADKSGRRVSIEYALIRDVNDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LGPL HVNLIPLNPTPGS WDASPKPVEREFV+RV+A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LHKALGPLVHVNLIPLNPTPGSKWDASPKPVEREFVRRVQAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|325673450|ref|ZP_08153141.1| cfr family radical SAM enzyme [Rhodococcus equi ATCC 33707]
gi|325555471|gb|EGD25142.1| cfr family radical SAM enzyme [Rhodococcus equi ATCC 33707]
Length=369
Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/185 (81%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G GIS RAVTVSTVGLAPAIR LAD + V LA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPSPDGLGISQRAVTVSTVGLAPAIRKLADEEMSVRLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWAVAEVLDAARYYADKSGRRVSIEYALIRDVNDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LGPL HVNLIPLNPTPGS WDASPKPVEREFV+RV+A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LHKALGPLVHVNLIPLNPTPGSKWDASPKPVEREFVRRVQAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|108798974|ref|YP_639171.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. MCS]
gi|119868089|ref|YP_938041.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. KMS]
gi|126434574|ref|YP_001070265.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. JLS]
6 more sequence titles
Length=374
Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/187 (87%), Positives = 173/187 (93%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RI A PP GFGISAR+VTVSTVGLAPAIR LAD RL VTLALSLH
Sbjct 188 GEPLANYNRVIAAVRRIVAPPPDGFGISARSVTVSTVGLAPAIRKLADERLNVTLALSLH 247
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVNNRW++SEALDAARYYA+VTGRRVSIEYALIRDVNDQPWRADLLGKR
Sbjct 248 APDDELRDTLVPVNNRWKVSEALDAARYYADVTGRRVSIEYALIRDVNDQPWRADLLGKR 307
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LGPL HVN+IPLNPTPGS+WDASPKP EREFV+RVR +GVSCTVRDTRGREI+AAC
Sbjct 308 LHGALGPLVHVNVIPLNPTPGSEWDASPKPAEREFVRRVRERGVSCTVRDTRGREIAAAC 367
Query 182 GQLAAVG 188
GQLAA G
Sbjct 368 GQLAAEG 374
>gi|111023545|ref|YP_706517.1| ribosomal RNA large subunit methyltransferase N [Rhodococcus
jostii RHA1]
gi|123144166|sp|Q0S277.1|RLMN_RHOSR RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|110823075|gb|ABG98359.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=369
Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G G+S R+VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPAPDGLGLSQRSVTVSTVGLAPAIRKLADEDLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRADLLGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVAEVLDAARYYADKSGRRVSIEYALIRDVNDQPWRADLLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LGPL HVNLIPLNPTPGS+WDASPKPVE+EFV+RV A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LRKALGPLVHVNLIPLNPTPGSEWDASPKPVEKEFVRRVLAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|226366029|ref|YP_002783812.1| ribosomal RNA large subunit methyltransferase N [Rhodococcus
opacus B4]
gi|254807198|sp|C1B2V0.1|RLMN_RHOOB RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|226244519|dbj|BAH54867.1| putative rRNA methyltransferase [Rhodococcus opacus B4]
Length=369
Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/185 (80%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G G+S R+VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPAPDGLGLSQRSVTVSTVGLAPAIRKLADEDLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVAEVLDAARYYADKSGRRVSIEYALIRDVNDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LGPL HVNLIPLNPTPGS+WDASPKPVE+EFV+RV A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LRKALGPLVHVNLIPLNPTPGSEWDASPKPVEKEFVRRVLAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|262202048|ref|YP_003273256.1| radical SAM protein [Gordonia bronchialis DSM 43247]
gi|262085395|gb|ACY21363.1| radical SAM enzyme, Cfr family [Gordonia bronchialis DSM 43247]
Length=368
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/185 (80%), Positives = 165/185 (90%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT+ P G GISAR+VTVSTVGLAP+IR LAD L VTLA+SLH
Sbjct 181 GEPLANYTRVVSAVRQITSPAPDGLGISARSVTVSTVGLAPSIRRLADEGLAVTLAVSLH 240
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW + E LDAARYYA+ TGRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 241 TPDDELRDTLVPVNNRWSVQEVLDAARYYADTTGRRVSIEYALIRDVNDQPWRADMLGKK 300
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS+WDASPKPVEREFV+RVR +GVSCTVRDTRG+EI+AAC
Sbjct 301 LHKALGSRVHVNLIPLNPTPGSEWDASPKPVEREFVRRVREQGVSCTVRDTRGQEIAAAC 360
Query 182 GQLAA 186
GQLAA
Sbjct 361 GQLAA 365
>gi|343926733|ref|ZP_08766230.1| ribosomal RNA large subunit methyltransferase N [Gordonia alkanivorans
NBRC 16433]
gi|343763332|dbj|GAA13156.1| ribosomal RNA large subunit methyltransferase N [Gordonia alkanivorans
NBRC 16433]
Length=443
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/186 (79%), Positives = 167/186 (90%), Gaps = 0/186 (0%)
Query 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
GEPLANY RV++AV++IT+ P G GISAR+VTVSTVGLAP+IR LAD L VTLA+SL
Sbjct 255 MGEPLANYKRVVSAVRQITSPAPDGLGISARSVTVSTVGLAPSIRRLADEGLAVTLAVSL 314
Query 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
H PDD LRDTLVPVNNRW ++E L+AARYYA+ TGRRVSIEYALIRDVNDQPWRAD+LG+
Sbjct 315 HTPDDELRDTLVPVNNRWSVAEVLEAARYYADTTGRRVSIEYALIRDVNDQPWRADMLGQ 374
Query 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
+LH+ LG L HVNLIPLNPTPGS+WDASPKPVEREFV+RVR +GVSCTVRDTRG+EI+AA
Sbjct 375 KLHKALGSLVHVNLIPLNPTPGSEWDASPKPVEREFVRRVREQGVSCTVRDTRGQEIAAA 434
Query 181 CGQLAA 186
CGQLAA
Sbjct 435 CGQLAA 440
>gi|326382905|ref|ZP_08204595.1| ribosomal RNA large subunit methyltransferase N [Gordonia neofelifaecis
NRRL B-59395]
gi|326198495|gb|EGD55679.1| ribosomal RNA large subunit methyltransferase N [Gordonia neofelifaecis
NRRL B-59395]
Length=371
Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 164/185 (89%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+ AV++IT+ P GFGISAR+VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 184 GEPLANYKRVVDAVRKITSPSPDGFGISARSVTVSTVGLAPAIRRLADEGLSVTLAVSLH 243
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E L+AARYYA+ TGRRVSIEYALIRDVNDQPWRADLLGK+
Sbjct 244 TPDDELRDTLVPVNNRWSVAEVLEAARYYADSTGRRVSIEYALIRDVNDQPWRADLLGKK 303
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVNLIPLNPTPGS+WDASPKPVE EFV+RVR GVSCTVRDTRG+EI+AAC
Sbjct 304 LRQALGSLVHVNLIPLNPTPGSEWDASPKPVEAEFVRRVREHGVSCTVRDTRGQEIAAAC 363
Query 182 GQLAA 186
GQLAA
Sbjct 364 GQLAA 368
>gi|229491476|ref|ZP_04385300.1| radical SAM enzyme, Cfr family [Rhodococcus erythropolis SK121]
gi|229321761|gb|EEN87558.1| radical SAM enzyme, Cfr family [Rhodococcus erythropolis SK121]
Length=369
Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/185 (78%), Positives = 163/185 (89%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G G+S R+VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPAPDGLGLSQRSVTVSTVGLAPAIRKLADEGLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW +SE L AARYYA+ TGRRVSIEYA+I++VNDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVSEVLQAARYYADKTGRRVSIEYAMIKNVNDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVNLIPLNPTPGS+WDASPK VEREFV+RV A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LKKALGGLVHVNLIPLNPTPGSEWDASPKDVEREFVRRVIAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|226306037|ref|YP_002765997.1| rRNA methyltransferase [Rhodococcus erythropolis PR4]
gi|259491995|sp|C0ZY23.1|RLMN_RHOE4 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|226185154|dbj|BAH33258.1| putative rRNA methyltransferase [Rhodococcus erythropolis PR4]
Length=369
Score = 296 bits (758), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 144/185 (78%), Positives = 163/185 (89%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT+ P G G+S R+VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITSPAPDGLGLSQRSVTVSTVGLAPAIRKLADEGLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW +SE L AARYYA+ TGRRVSIEYA+I++VNDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVSEVLQAARYYADKTGRRVSIEYAMIKNVNDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVNLIPLNPTPGS+WDASPK VEREFV+RV A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LKKALGGLVHVNLIPLNPTPGSEWDASPKDVEREFVRRVIAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|54026096|ref|YP_120338.1| ribosomal RNA large subunit methyltransferase N [Nocardia farcinica
IFM 10152]
gi|81373742|sp|Q5YS67.1|RLMN_NOCFA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|54017604|dbj|BAD58974.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=369
Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/185 (78%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RITA P G GIS R V VSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVAAVRRITAPAPDGLGISQRNVVVSTVGLAPAIRKLADEGLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ TGRRVS+EYALIRD+NDQPWRAD+LG +
Sbjct 243 TPDDELRDTLVPVNNRWPVAEVLDAARYYADTTGRRVSVEYALIRDINDQPWRADMLGAK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVN+IPLNPTPGS WDASPKPVEREFV+RV +GV CTVRDTRG+EI+AAC
Sbjct 303 LHKALGSRVHVNVIPLNPTPGSKWDASPKPVEREFVRRVNEQGVPCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|337291022|ref|YP_004630043.1| hypothetical protein CULC22_01414 [Corynebacterium ulcerans BR-AD22]
gi|334697135|gb|AEG81932.1| hypothetical protein CULC809_01400 [Corynebacterium ulcerans
809]
gi|334699328|gb|AEG84124.1| hypothetical protein CULC22_01414 [Corynebacterium ulcerans BR-AD22]
Length=396
Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 141/185 (77%), Positives = 161/185 (88%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT+ P GFGIS R VTVSTVGLAPAIR LA+ L VTLA+SLH
Sbjct 209 GEPLANYKRVVSAVRQITSPVPEGFGISQRNVTVSTVGLAPAIRKLAEEDLSVTLAVSLH 268
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVP NNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRAD+LGK+
Sbjct 269 TPDDELRDTLVPTNNRWEVAEVLDAARYYADRSGRRVSIEYALIRDVNDQPWRADMLGKK 328
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG L HVNLIPLNPTPGS+WDASPK + EFV+RV A+GV CTVRDTRG+EI+AAC
Sbjct 329 LHKALGSLVHVNLIPLNPTPGSEWDASPKDRQDEFVRRVIAQGVPCTVRDTRGQEIAAAC 388
Query 182 GQLAA 186
GQLAA
Sbjct 389 GQLAA 393
>gi|257055048|ref|YP_003132880.1| ribosomal RNA large subunit methyltransferase N [Saccharomonospora
viridis DSM 43017]
gi|256584920|gb|ACU96053.1| radical SAM enzyme, Cfr family [Saccharomonospora viridis DSM
43017]
Length=370
Score = 293 bits (749), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/187 (79%), Positives = 159/187 (86%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVLAAV+RIT PP+G GIS R+VTVSTVGLAPAIR LAD L V LA+SLH
Sbjct 184 GEPLANYKRVLAAVRRITDPPPAGLGISQRSVTVSTVGLAPAIRKLADEGLQVRLAVSLH 243
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRD LVPVNNRW + E L AARYYA+ TGRRVSIEYALIRD+NDQPWRADLL KR
Sbjct 244 TPDDELRDELVPVNNRWSVDEVLRAARYYADRTGRRVSIEYALIRDINDQPWRADLLAKR 303
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L LG L HVN+IPLNPTPGS WDASPKPVEREFV+RV A GV+CTVRDTRG+EI+AAC
Sbjct 304 LREHLGQLVHVNVIPLNPTPGSKWDASPKPVEREFVRRVNAGGVACTVRDTRGQEIAAAC 363
Query 182 GQLAAVG 188
GQLAA G
Sbjct 364 GQLAAEG 370
>gi|300858724|ref|YP_003783707.1| hypothetical protein cpfrc_01307 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686178|gb|ADK29100.1| hypothetical protein cpfrc_01307 [Corynebacterium pseudotuberculosis
FRC41]
Length=203
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/186 (76%), Positives = 162/186 (88%), Gaps = 0/186 (0%)
Query 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
WGEPLANY RV++AV++IT+ P GFGIS R VTVSTVGLAPAIR LA+ L VTLA+SL
Sbjct 15 WGEPLANYKRVVSAVRQITSPVPEGFGISQRNVTVSTVGLAPAIRKLAEEDLSVTLAVSL 74
Query 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
H PDD LR+TLVP NNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQPWRAD+LGK
Sbjct 75 HTPDDELRNTLVPTNNRWEVAEVLDAARYYADRSGRRVSIEYALIRDVNDQPWRADMLGK 134
Query 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
+LH+ LG L HVNLIPLNPTPGS+WDASPK + EFV+RV A+GV CTVRDTRG+EI+AA
Sbjct 135 KLHKALGSLVHVNLIPLNPTPGSEWDASPKDRQHEFVRRVIAQGVPCTVRDTRGQEIAAA 194
Query 181 CGQLAA 186
CGQLAA
Sbjct 195 CGQLAA 200
>gi|38234081|ref|NP_939848.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
diphtheriae NCTC 13129]
gi|81564752|sp|Q6NGK9.1|RLMN_CORDI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|38200343|emb|CAE50029.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=368
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/185 (77%), Positives = 161/185 (88%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++ITA P GFGIS R VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 181 GEPLANYKRVVSAVRQITAPVPEGFGISQRNVTVSTVGLAPAIRKLADEDLSVTLAVSLH 240
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LR+TLVP NNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQ WRAD+LGK+
Sbjct 241 TPDDELRNTLVPTNNRWEVAEVLDAARYYADRSGRRVSIEYALIRDVNDQGWRADMLGKK 300
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LGPL HVNLIPLNPTPGS WDASP ++EFV+RV A+GV+CTVRDTRG+EI+AAC
Sbjct 301 LHKALGPLVHVNLIPLNPTPGSKWDASPMDRQKEFVQRVIAQGVTCTVRDTRGQEIAAAC 360
Query 182 GQLAA 186
GQLAA
Sbjct 361 GQLAA 365
>gi|296139393|ref|YP_003646636.1| radical SAM enzyme, Cfr family [Tsukamurella paurometabola DSM
20162]
gi|296027527|gb|ADG78297.1| radical SAM enzyme, Cfr family [Tsukamurella paurometabola DSM
20162]
Length=371
Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/185 (78%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+ AV+RIT+ P G GIS R VTVSTVGLAPAIR LAD L VTLA+SLH
Sbjct 183 GEPLANYKRVVQAVRRITSPAPEGLGISQRHVTVSTVGLAPAIRKLADEGLSVTLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ TGRRVSIEYALIRDVNDQPWRAD+LG++
Sbjct 243 TPDDELRDTLVPVNNRWSVAEVLDAARYYADQTGRRVSIEYALIRDVNDQPWRADMLGEK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L LG AHVNLIPLNPTPGS+WDASPK + EFV+RV A+GVSCTVRDTRG+EI+AAC
Sbjct 303 LRTKLGQFAHVNLIPLNPTPGSEWDASPKDRQDEFVRRVIAQGVSCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|334564570|ref|ZP_08517561.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
bovis DSM 20582]
Length=372
Score = 290 bits (741), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/185 (77%), Positives = 156/185 (85%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVL A++RITA P GFGIS R VTVSTVGLAPAIR LAD + V LA+SLH
Sbjct 183 GEPLANYKRVLTAIRRITAPAPEGFGISQRNVTVSTVGLAPAIRKLADEEMSVRLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRD LVPVNNRW ++E LDAA YYA +GRRVSIEYALIRD+NDQPWRADLLGKR
Sbjct 243 CPDDELRDELVPVNNRWSVTEVLDAAAYYAEKSGRRVSIEYALIRDMNDQPWRADLLGKR 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L R LG HVN+IPLNPTPGS WDA+PKPV+ EFV+RV A+GV CTVRDTRG+EI+AAC
Sbjct 303 LKRALGSKVHVNVIPLNPTPGSKWDAAPKPVQDEFVRRVNAQGVPCTVRDTRGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|333919256|ref|YP_004492837.1| ribosomal RNA large subunit methyltransferase N [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481477|gb|AEF40037.1| Ribosomal RNA large subunit methyltransferase N [Amycolicicoccus
subflavus DQS3-9A1]
Length=385
Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/185 (77%), Positives = 160/185 (87%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RITA P G G+S R VTVSTVGLAPAIR LA+ L VTLA+SLH
Sbjct 199 GEPLANYKRVIAAVRRITAPAPEGLGLSQRNVTVSTVGLAPAIRKLAEEDLNVTLAVSLH 258
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAA+YYA+ TGRRVSIEYALIRD+NDQ WRAD+LGK+
Sbjct 259 TPDDELRDTLVPVNNRWAVAEVLDAAKYYADTTGRRVSIEYALIRDINDQGWRADMLGKK 318
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVN+IPLNPTPGS WDASPK VE EFV+RV+A+GV CTVRDTRG+EI+AAC
Sbjct 319 LRKALGHLVHVNVIPLNPTPGSKWDASPKTVEAEFVRRVQAQGVPCTVRDTRGQEIAAAC 378
Query 182 GQLAA 186
GQLAA
Sbjct 379 GQLAA 383
>gi|258652388|ref|YP_003201544.1| ribosomal RNA large subunit methyltransferase N [Nakamurella
multipartita DSM 44233]
gi|258555613|gb|ACV78555.1| radical SAM enzyme, Cfr family [Nakamurella multipartita DSM
44233]
Length=372
Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/187 (76%), Positives = 159/187 (86%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVL AV+ ITA PSG GISAR+VTVSTVGL PAIR L + +L V LA+SLH
Sbjct 182 GEPLANYNRVLEAVRAITAPAPSGLGISARSVTVSTVGLVPAIRRLTEEKLQVRLAVSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVN RW+++E L AAR YA+ TGRRVSIEYALIRD+NDQPWRADLLG
Sbjct 242 TPDDELRDTLVPVNERWKVAEVLAAAREYADTTGRRVSIEYALIRDINDQPWRADLLGSL 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L LGPL HVNLIPLNPTPGS WDASP+PV+ EFV+RVRA+GV+CTVRDTRG+EI+AAC
Sbjct 302 LREHLGPLVHVNLIPLNPTPGSQWDASPRPVQDEFVRRVRAQGVACTVRDTRGQEIAAAC 361
Query 182 GQLAAVG 188
GQLAA G
Sbjct 362 GQLAAEG 368
>gi|145295923|ref|YP_001138744.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
glutamicum R]
gi|205829740|sp|A4QF26.1|RLMN_CORGB RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|140845843|dbj|BAF54842.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044154|gb|EGV39835.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
glutamicum S9114]
Length=366
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/185 (75%), Positives = 160/185 (87%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT P+GFGIS R+VTVSTVGLAPAIR LAD + VTLA+SLH
Sbjct 178 GEPLANYKRVVSAVRQITQPSPAGFGISQRSVTVSTVGLAPAIRKLADEEMSVTLAVSLH 237
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQ WRAD+LG++
Sbjct 238 TPDDELRDTLVPVNNRWPVAEVLDAARYYADKSGRRVSIEYALIRDVNDQDWRADMLGEK 297
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS WDA+PK + EFV+RV AKGV CTVRDT+G+EI+AAC
Sbjct 298 LHKALGSRVHVNLIPLNPTPGSKWDAAPKARQDEFVRRVIAKGVPCTVRDTKGQEIAAAC 357
Query 182 GQLAA 186
GQLAA
Sbjct 358 GQLAA 362
>gi|302525208|ref|ZP_07277550.1| ribosomal RNA large subunit methyltransferase N [Streptomyces
sp. AA4]
gi|302434103|gb|EFL05919.1| ribosomal RNA large subunit methyltransferase N [Streptomyces
sp. AA4]
Length=368
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/187 (75%), Positives = 159/187 (86%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT P+G GI R+VTVSTVGLAPAIR LAD ++ V LA+SLH
Sbjct 182 GEPLANYKRVVAAVRRITDPSPAGLGIGQRSVTVSTVGLAPAIRKLADEKMQVRLAVSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW + E L AARYYA+ +GRRVSIEYALIRD+NDQPWRA+LL KR
Sbjct 242 TPDDELRDTLVPVNNRWSVDEVLSAARYYADTSGRRVSIEYALIRDINDQPWRAELLAKR 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVN+IPLNPTPGS WDASPKPVEREFV+ V A GV+CTVRDTRG++I+AAC
Sbjct 302 LRKHLGQLVHVNVIPLNPTPGSKWDASPKPVEREFVRLVNAGGVACTVRDTRGQDIAAAC 361
Query 182 GQLAAVG 188
GQLAA G
Sbjct 362 GQLAAEG 368
>gi|19553223|ref|NP_601225.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
glutamicum ATCC 13032]
gi|62390859|ref|YP_226261.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
glutamicum ATCC 13032]
gi|81760328|sp|Q8NP06.1|RLMN_CORGL RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|21324790|dbj|BAB99413.1| Predicted Fe-S-cluster redox enzyme [Corynebacterium glutamicum
ATCC 13032]
gi|41326198|emb|CAF20360.1| Predicted Fe-S-cluster redox enzyme [Corynebacterium glutamicum
ATCC 13032]
Length=366
Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/185 (75%), Positives = 160/185 (87%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT P+GFGIS R+VTVSTVGLAPAIR LAD + VTLA+SLH
Sbjct 178 GEPLANYKRVVSAVRQITQPSPAGFGISQRSVTVSTVGLAPAIRKLADEEMSVTLAVSLH 237
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQ WRAD+LG++
Sbjct 238 TPDDELRDTLVPVNNRWPVAEVLDAARYYADKSGRRVSIEYALIRDVNDQDWRADMLGEK 297
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS WDA+PK + EFV+RV AKGV CTVRDT+G+EI+AAC
Sbjct 298 LHKALGSRVHVNLIPLNPTPGSKWDAAPKARQDEFVRRVIAKGVPCTVRDTKGQEIAAAC 357
Query 182 GQLAA 186
GQLAA
Sbjct 358 GQLAA 362
>gi|300783906|ref|YP_003764197.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei U32]
gi|299793420|gb|ADJ43795.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei U32]
gi|340525301|gb|AEK40506.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei S699]
Length=368
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/187 (75%), Positives = 157/187 (84%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+AAV+RIT P G GI R+VTVSTVGLAPAIR LAD ++ V LA+SLH
Sbjct 182 GEPLANYKRVVAAVRRITDPAPGGLGIGQRSVTVSTVGLAPAIRKLADEKMQVRLAVSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVN RW + E L AARYYA+ +GRRVSIEYALIRD+NDQPWRA+LL KR
Sbjct 242 TPDDELRDTLVPVNERWSVDEVLSAARYYADTSGRRVSIEYALIRDINDQPWRAELLAKR 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L + LG L HVN+IPLNPTPGS WDASPKPVEREFV+ V A GV+CTVRDTRG+EI+AAC
Sbjct 302 LRKHLGQLVHVNVIPLNPTPGSKWDASPKPVEREFVRLVNAGGVACTVRDTRGQEIAAAC 361
Query 182 GQLAAVG 188
GQLAA G
Sbjct 362 GQLAAEG 368
>gi|225021120|ref|ZP_03710312.1| hypothetical protein CORMATOL_01132 [Corynebacterium matruchotii
ATCC 33806]
gi|224946120|gb|EEG27329.1| hypothetical protein CORMATOL_01132 [Corynebacterium matruchotii
ATCC 33806]
Length=389
Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/185 (75%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++ITA P GFGIS R VTVSTVG+AP IR LAD L VTLA+SLH
Sbjct 199 GEPLANYKRVVSAVRQITAPVPQGFGISQRNVTVSTVGMAPMIRKLADENLSVTLAVSLH 258
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAA YYA+ +GRRVSIEYALIRD+NDQ WRADLLGK+
Sbjct 259 TPDDELRDTLVPVNNRWSVAEVLDAAAYYADRSGRRVSIEYALIRDINDQGWRADLLGKK 318
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG AHVNLIPLNPTPGS WDASP+ + EFV+RV A+GV+CTVRDT+G+EI+AAC
Sbjct 319 LHKALGSKAHVNLIPLNPTPGSKWDASPREQQAEFVRRVIAQGVTCTVRDTKGQEIAAAC 378
Query 182 GQLAA 186
GQLAA
Sbjct 379 GQLAA 383
>gi|213964408|ref|ZP_03392608.1| radical SAM enzyme, Cfr family [Corynebacterium amycolatum SK46]
gi|213952601|gb|EEB63983.1| radical SAM enzyme, Cfr family [Corynebacterium amycolatum SK46]
Length=369
Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/186 (75%), Positives = 153/186 (83%), Gaps = 0/186 (0%)
Query 1 WGEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSL 60
GEPLANY RVLAA+ RIT P GFGIS R VTVSTVG AP IR LAD L VTLA+SL
Sbjct 181 MGEPLANYNRVLAAIHRITRPSPEGFGISMRNVTVSTVGFAPNIRRLADEDLSVTLAVSL 240
Query 61 HAPDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGK 120
H PDD LRD LVP+NNR+ ++E LDAARYYA+ TGRRVSIEYALIRD+NDQ WRADLLGK
Sbjct 241 HTPDDELRDELVPINNRFTVAEVLDAARYYADKTGRRVSIEYALIRDINDQDWRADLLGK 300
Query 121 RLHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAA 180
+LH LG HVNLIPLNPTPGS WDASPK + EFV+RV+A+GV CTVRDTRG EI+AA
Sbjct 301 KLHNALGSRVHVNLIPLNPTPGSKWDASPKKQQEEFVRRVQAQGVPCTVRDTRGNEIAAA 360
Query 181 CGQLAA 186
CGQLAA
Sbjct 361 CGQLAA 366
>gi|305680861|ref|ZP_07403668.1| 23S rRNA m2A2503 methyltransferase [Corynebacterium matruchotii
ATCC 14266]
gi|305659066|gb|EFM48566.1| 23S rRNA m2A2503 methyltransferase [Corynebacterium matruchotii
ATCC 14266]
Length=385
Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/185 (75%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++ITA P GFGIS R VTVSTVG+AP IR LAD L VTLA+SLH
Sbjct 195 GEPLANYKRVVSAVRQITAPVPQGFGISQRNVTVSTVGMAPMIRKLADENLSVTLAVSLH 254
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW ++E LDAA YYA+ +GRRVSIEYALIRD+NDQ WRADLLGK+
Sbjct 255 TPDDELRDTLVPVNNRWSVAEVLDAAAYYADRSGRRVSIEYALIRDINDQGWRADLLGKK 314
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG AHVNLIPLNPTPGS WDASP+ + EFV+RV A+GV+CTVRDT+G+EI+AAC
Sbjct 315 LHKALGSKAHVNLIPLNPTPGSKWDASPREQQAEFVRRVIAQGVTCTVRDTKGQEIAAAC 374
Query 182 GQLAA 186
GQLAA
Sbjct 375 GQLAA 379
>gi|259507523|ref|ZP_05750423.1| Cfr family radical SAM enzyme [Corynebacterium efficiens YS-314]
gi|259164908|gb|EEW49462.1| Cfr family radical SAM enzyme [Corynebacterium efficiens YS-314]
Length=354
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/185 (74%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT P GFGIS R+VTVSTVGLAPAIR LAD + VTLA+SLH
Sbjct 163 GEPLANYKRVVSAVRQITQPSPEGFGISQRSVTVSTVGLAPAIRKLADEDMSVTLAVSLH 222
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRD LVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQ WRAD+LG++
Sbjct 223 TPDDELRDELVPVNNRWSVAEVLDAARYYADKSGRRVSIEYALIRDVNDQGWRADMLGQK 282
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS WDASP+ + EFV+RV A+GV CTVRDT+G+EI+AAC
Sbjct 283 LHKALGSRVHVNLIPLNPTPGSKWDASPRERQDEFVRRVIAQGVPCTVRDTKGQEIAAAC 342
Query 182 GQLAA 186
GQLAA
Sbjct 343 GQLAA 347
>gi|25028463|ref|NP_738517.1| hypothetical protein CE1907 [Corynebacterium efficiens YS-314]
gi|81749328|sp|Q8FP78.1|RLMN_COREF RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|23493748|dbj|BAC18717.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=369
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/185 (74%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV++AV++IT P GFGIS R+VTVSTVGLAPAIR LAD + VTLA+SLH
Sbjct 178 GEPLANYKRVVSAVRQITQPSPEGFGISQRSVTVSTVGLAPAIRKLADEDMSVTLAVSLH 237
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRD LVPVNNRW ++E LDAARYYA+ +GRRVSIEYALIRDVNDQ WRAD+LG++
Sbjct 238 TPDDELRDELVPVNNRWSVAEVLDAARYYADKSGRRVSIEYALIRDVNDQGWRADMLGQK 297
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS WDASP+ + EFV+RV A+GV CTVRDT+G+EI+AAC
Sbjct 298 LHKALGSRVHVNLIPLNPTPGSKWDASPRERQDEFVRRVIAQGVPCTVRDTKGQEIAAAC 357
Query 182 GQLAA 186
GQLAA
Sbjct 358 GQLAA 362
>gi|172040504|ref|YP_001800218.1| hypothetical protein cur_0824 [Corynebacterium urealyticum DSM
7109]
gi|171851808|emb|CAQ04784.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
7109]
Length=370
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/185 (75%), Positives = 154/185 (84%), Gaps = 0/185 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+ AV++IT P GFGIS R VTVSTVGLAPAIR LAD + V LA+SLH
Sbjct 183 GEPLANYKRVVEAVRQITQPEPHGFGISQRNVTVSTVGLAPAIRKLADEDMSVRLAVSLH 242
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVNNRW + E LDAA YYA +GRRVSIEYALIRD+NDQPWRAD+LGK+
Sbjct 243 TPDDELRDTLVPVNNRWSVEEVLDAAAYYAEKSGRRVSIEYALIRDINDQPWRADMLGKK 302
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH+ LG HVNLIPLNPTPGS WDASPK + EFV+RV A+GV CTVRDT+G+EI+AAC
Sbjct 303 LHKALGSKVHVNLIPLNPTPGSKWDASPKERQDEFVQRVIAQGVPCTVRDTKGQEIAAAC 362
Query 182 GQLAA 186
GQLAA
Sbjct 363 GQLAA 367
>gi|256379897|ref|YP_003103557.1| ribosomal RNA large subunit methyltransferase N [Actinosynnema
mirum DSM 43827]
gi|255924200|gb|ACU39711.1| radical SAM enzyme, Cfr family [Actinosynnema mirum DSM 43827]
Length=368
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/187 (74%), Positives = 156/187 (84%), Gaps = 0/187 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RV+ AV RI P+G GIS R+VTVSTVGL PAIR L + L V LA+SLH
Sbjct 182 GEPLANYKRVIEAVHRICDPAPAGLGISQRSVTVSTVGLVPAIRKLTEENLQVRLAVSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
PDD LRDTLVPVN RW+++E ++AAR YA+ TGRRVSIEYALIRD+NDQ WRAD+LGK
Sbjct 242 TPDDELRDTLVPVNTRWKVAEVMEAARGYADRTGRRVSIEYALIRDINDQGWRADMLGKL 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
L R LGPL HVNLIPLNPTPGS WDASPKPVEREFV+RV+ +GV CTVRDTRG+EI+AAC
Sbjct 302 LRRHLGPLVHVNLIPLNPTPGSKWDASPKPVEREFVRRVKEQGVECTVRDTRGQEIAAAC 361
Query 182 GQLAAVG 188
GQLAA G
Sbjct 362 GQLAAEG 368
>gi|296393255|ref|YP_003658139.1| radical SAM enzyme, Cfr family [Segniliparus rotundus DSM 44985]
gi|296180402|gb|ADG97308.1| radical SAM enzyme, Cfr family [Segniliparus rotundus DSM 44985]
Length=368
Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/184 (77%), Positives = 155/184 (85%), Gaps = 0/184 (0%)
Query 2 GEPLANYARVLAAVQRITARPPSGFGISARAVTVSTVGLAPAIRNLADARLGVTLALSLH 61
GEPLANY RVL AV+RIT+ P GFGIS R+V VSTVGL PAI LA+ L VTLA+SLH
Sbjct 182 GEPLANYRRVLDAVRRITSPAPEGFGISQRSVVVSTVGLVPAIHRLANEGLSVTLAVSLH 241
Query 62 APDDGLRDTLVPVNNRWRISEALDAARYYANVTGRRVSIEYALIRDVNDQPWRADLLGKR 121
APDD LRDTLVPVN RW ++E L AA+ YA TGRRVS+EYALIRDVNDQPWRADLLG
Sbjct 242 APDDELRDTLVPVNTRWPVAEVLAAAKGYAQQTGRRVSVEYALIRDVNDQPWRADLLGGL 301
Query 122 LHRVLGPLAHVNLIPLNPTPGSDWDASPKPVEREFVKRVRAKGVSCTVRDTRGREISAAC 181
LH LG LAHVNLIPLNPTPGS+WDASP +REFV+RVRAKGVSCTVRDTRG+EI+AAC
Sbjct 302 LHEALGSLAHVNLIPLNPTPGSEWDASPPEAQREFVRRVRAKGVSCTVRDTRGQEIAAAC 361
Query 182 GQLA 185
GQLA
Sbjct 362 GQLA 365
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187037746340
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40