BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2880c
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610017|ref|NP_217396.1| hypothetical protein Rv2880c [Mycob... 549 2e-154
gi|289759001|ref|ZP_06518379.1| LOW QUALITY PROTEIN: 23S rRNA me... 362 2e-98
gi|15842421|ref|NP_337458.1| ribosomal RNA large subunit methylt... 362 4e-98
gi|289754992|ref|ZP_06514370.1| LOW QUALITY PROTEIN: 23S rRNA me... 360 1e-97
gi|289444435|ref|ZP_06434179.1| cfr family radical SAM enzyme [M... 359 3e-97
gi|254776158|ref|ZP_05217674.1| hypothetical protein MaviaA2_160... 323 2e-86
gi|41409041|ref|NP_961877.1| hypothetical protein MAP2943c [Myco... 322 3e-86
gi|183981843|ref|YP_001850134.1| hypothetical protein MMAR_1830 ... 318 4e-85
gi|342858274|ref|ZP_08714929.1| ribosomal RNA large subunit meth... 318 8e-85
gi|118617647|ref|YP_905979.1| hypothetical protein MUL_2078 [Myc... 317 1e-84
gi|296171525|ref|ZP_06852789.1| cfr family radical SAM enzyme [M... 311 5e-83
gi|240171730|ref|ZP_04750389.1| hypothetical protein MkanA1_2062... 310 1e-82
gi|254819036|ref|ZP_05224037.1| hypothetical protein MintA_03871... 306 1e-81
gi|120403214|ref|YP_953043.1| ribosomal RNA large subunit methyl... 286 3e-75
gi|333991237|ref|YP_004523851.1| hypothetical protein JDM601_259... 271 1e-70
gi|118472101|ref|YP_886882.1| ribosomal RNA large subunit methyl... 267 1e-69
gi|145224701|ref|YP_001135379.1| ribosomal RNA large subunit met... 266 2e-69
gi|315445031|ref|YP_004077910.1| 23S rRNA m(2)A-2503 methyltrans... 266 3e-69
gi|108798974|ref|YP_639171.1| ribosomal RNA large subunit methyl... 261 6e-68
gi|226366029|ref|YP_002783812.1| ribosomal RNA large subunit met... 253 2e-65
gi|111023545|ref|YP_706517.1| ribosomal RNA large subunit methyl... 252 5e-65
gi|226306037|ref|YP_002765997.1| rRNA methyltransferase [Rhodoco... 251 7e-65
gi|325673450|ref|ZP_08153141.1| cfr family radical SAM enzyme [R... 250 2e-64
gi|312139245|ref|YP_004006581.1| radical sam protein [Rhodococcu... 250 2e-64
gi|229491476|ref|ZP_04385300.1| radical SAM enzyme, Cfr family [... 250 2e-64
gi|262202048|ref|YP_003273256.1| radical SAM protein [Gordonia b... 249 2e-64
gi|326382905|ref|ZP_08204595.1| ribosomal RNA large subunit meth... 245 5e-63
gi|54026096|ref|YP_120338.1| ribosomal RNA large subunit methylt... 244 1e-62
gi|343926733|ref|ZP_08766230.1| ribosomal RNA large subunit meth... 243 3e-62
gi|319948052|ref|ZP_08022226.1| ribosomal RNA large subunit meth... 242 5e-62
gi|169630257|ref|YP_001703906.1| ribosomal RNA large subunit met... 238 1e-60
gi|300858725|ref|YP_003783708.1| hypothetical protein cpfrc_0130... 235 4e-60
gi|333919256|ref|YP_004492837.1| ribosomal RNA large subunit met... 234 1e-59
gi|225021120|ref|ZP_03710312.1| hypothetical protein CORMATOL_01... 233 2e-59
gi|305680861|ref|ZP_07403668.1| 23S rRNA m2A2503 methyltransfera... 232 4e-59
gi|300783906|ref|YP_003764197.1| ribosomal RNA large subunit met... 232 4e-59
gi|337291022|ref|YP_004630043.1| hypothetical protein CULC22_014... 231 8e-59
gi|302525208|ref|ZP_07277550.1| ribosomal RNA large subunit meth... 231 8e-59
gi|237785746|ref|YP_002906451.1| ribosomal RNA large subunit met... 231 8e-59
gi|334564570|ref|ZP_08517561.1| ribosomal RNA large subunit meth... 231 1e-58
gi|213964408|ref|ZP_03392608.1| radical SAM enzyme, Cfr family [... 230 2e-58
gi|336325814|ref|YP_004605780.1| hypothetical protein CRES_1261 ... 229 3e-58
gi|284032622|ref|YP_003382553.1| radical SAM enzyme, Cfr family ... 229 4e-58
gi|257055048|ref|YP_003132880.1| ribosomal RNA large subunit met... 228 5e-58
gi|134102464|ref|YP_001108125.1| ribosomal RNA large subunit met... 228 7e-58
gi|38234081|ref|NP_939848.1| ribosomal RNA large subunit methylt... 228 9e-58
gi|269127610|ref|YP_003300980.1| radical SAM enzyme, Cfr family ... 225 7e-57
gi|256379897|ref|YP_003103557.1| ribosomal RNA large subunit met... 224 1e-56
gi|172040504|ref|YP_001800218.1| hypothetical protein cur_0824 [... 224 1e-56
gi|296139393|ref|YP_003646636.1| radical SAM enzyme, Cfr family ... 221 7e-56
>gi|15610017|ref|NP_217396.1| hypothetical protein Rv2880c [Mycobacterium tuberculosis H37Rv]
gi|148662724|ref|YP_001284247.1| hypothetical protein MRA_2905 [Mycobacterium tuberculosis H37Ra]
gi|1403400|emb|CAA98356.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506876|gb|ABQ74685.1| hypothetical protein MRA_2905 [Mycobacterium tuberculosis H37Ra]
Length=275
Score = 549 bits (1414), Expect = 2e-154, Method: Compositional matrix adjust.
Identities = 275/275 (100%), Positives = 275/275 (100%), Gaps = 0/275 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI
Sbjct 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAA 180
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAA
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAA 180
Query 181 GQLRQGVGRSSAHYRAAAVRFRDFGPRGDGVDGGSGPCYPQPCRRAARRDPGAVAARPRR 240
GQLRQGVGRSSAHYRAAAVRFRDFGPRGDGVDGGSGPCYPQPCRRAARRDPGAVAARPRR
Sbjct 181 GQLRQGVGRSSAHYRAAAVRFRDFGPRGDGVDGGSGPCYPQPCRRAARRDPGAVAARPRR 240
Query 241 RVARYTSSGQQPVEDQRSARCGPVLRQCDRATGVY 275
RVARYTSSGQQPVEDQRSARCGPVLRQCDRATGVY
Sbjct 241 RVARYTSSGQQPVEDQRSARCGPVLRQCDRATGVY 275
>gi|289759001|ref|ZP_06518379.1| LOW QUALITY PROTEIN: 23S rRNA methyltransferase [Mycobacterium
tuberculosis T85]
gi|289714565|gb|EFD78577.1| LOW QUALITY PROTEIN: 23S rRNA methyltransferase [Mycobacterium
tuberculosis T85]
Length=275
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/177 (100%), Positives = 177/177 (100%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI
Sbjct 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|15842421|ref|NP_337458.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
tuberculosis CDC1551]
gi|31794056|ref|NP_856549.1| hypothetical protein Mb2904c [Mycobacterium bovis AF2122/97]
gi|121638761|ref|YP_978985.1| hypothetical protein BCG_2901c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
62 more sequence titles
Length=364
Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/177 (100%), Positives = 177/177 (100%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI
Sbjct 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|289754992|ref|ZP_06514370.1| LOW QUALITY PROTEIN: 23S rRNA methyltransferase [Mycobacterium
tuberculosis EAS054]
gi|289695579|gb|EFD63008.1| LOW QUALITY PROTEIN: 23S rRNA methyltransferase [Mycobacterium
tuberculosis EAS054]
Length=275
Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/177 (99%), Positives = 176/177 (99%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRY RRNTVCI
Sbjct 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYSRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|289444435|ref|ZP_06434179.1| cfr family radical SAM enzyme [Mycobacterium tuberculosis T46]
gi|289751545|ref|ZP_06510923.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289417354|gb|EFD14594.1| cfr family radical SAM enzyme [Mycobacterium tuberculosis T46]
gi|289692132|gb|EFD59561.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=364
Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/177 (99%), Positives = 176/177 (99%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRY RRNTVCI
Sbjct 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYSRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|254776158|ref|ZP_05217674.1| hypothetical protein MaviaA2_16010 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=364
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/177 (88%), Positives = 166/177 (94%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV +L+F EPRPG+PPRHLADLDA GRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVQQLVFSEPRPGKPPRHLADLDADGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPA +RD IA MFP LLTA++++TCDAGQTRKTLWRA+DG ESVLMRYP+RNTVCI
Sbjct 61 DLPAGLRDAIADTMFPILLTAASEVTCDAGQTRKTLWRALDGVTVESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGL+RNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLSRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|41409041|ref|NP_961877.1| hypothetical protein MAP2943c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81571119|sp|Q73VR8.1|RLMN_MYCPA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|41397400|gb|AAS05260.1| hypothetical protein MAP_2943c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336459070|gb|EGO38020.1| 23S rRNA m2A2503 methyltransferase [Mycobacterium avium subsp.
paratuberculosis S397]
Length=364
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/177 (88%), Positives = 165/177 (94%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV +L+F EPRPG+PPRHLADLDA GRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVQQLVFSEPRPGKPPRHLADLDADGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPA +RD IA MFP LLTA++++TCDAGQTRKTLWRA+DG ESVLMRYP RNTVCI
Sbjct 61 DLPAGLRDAIADTMFPILLTAASEVTCDAGQTRKTLWRALDGVTVESVLMRYPHRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGL+RNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLSRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
>gi|183981843|ref|YP_001850134.1| hypothetical protein MMAR_1830 [Mycobacterium marinum M]
gi|205829814|sp|B2HJP3.1|RLMN_MYCMM RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|183175169|gb|ACC40279.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=364
Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/177 (87%), Positives = 162/177 (92%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
M ELMF+EPR G+PPRHLAD DA GRASAVA LGLP FRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MAQELMFEEPRRGKPPRHLADFDAEGRASAVAALGLPPFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVR++IA MFPNLLTA+ ++TCDAGQTRKTLWRA DG ESVLMRYP+RNTVCI
Sbjct 61 DLPAAVREQIAETMFPNLLTAAREVTCDAGQTRKTLWRATDGVTLESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRA AAALRD+FGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAAAAALRDEFGDRLSNVVFMGMG 177
>gi|342858274|ref|ZP_08714929.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
colombiense CECT 3035]
gi|342133978|gb|EGT87158.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
colombiense CECT 3035]
Length=364
Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 153/177 (87%), Positives = 163/177 (93%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV +L+F EPR G+PPRHLADLD GRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVAQLVFSEPRRGKPPRHLADLDEDGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPA VRD IA MFP LL+A++++TCDAGQTRKTLWRA+DG ESVLMRYP+RNTVCI
Sbjct 61 DLPAGVRDAIAETMFPILLSAASEVTCDAGQTRKTLWRALDGVTVESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGA ALRDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAVALRDDFGDRLSNVVFMGMG 177
>gi|118617647|ref|YP_905979.1| hypothetical protein MUL_2078 [Mycobacterium ulcerans Agy99]
gi|205829818|sp|A0PQ89.1|RLMN_MYCUA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|118569757|gb|ABL04508.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=364
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/177 (86%), Positives = 162/177 (92%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
M ELMF+EPR G+PPRHLAD DA GRASAVA LGLP FRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MAQELMFEEPRRGKPPRHLADFDAEGRASAVAALGLPPFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRD+IA MFPNLLTA+ ++TCDAGQTRKTLWRA DG ESVLMRYP+RNTVCI
Sbjct 61 DLPAAVRDQIAETMFPNLLTAAREVTCDAGQTRKTLWRATDGVTVESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEI+EQVRA AAALRD+FGDRLSNVVFMG+G
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEIVEQVRAAAAALRDEFGDRLSNVVFMGLG 177
>gi|296171525|ref|ZP_06852789.1| cfr family radical SAM enzyme [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894087|gb|EFG73848.1| cfr family radical SAM enzyme [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=367
Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/180 (85%), Positives = 163/180 (91%), Gaps = 3/180 (1%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV +L+F EPRP RPPRHLADLDA GRA+AVAEL LPAFRAKQLAHQYYGRLIADPR MT
Sbjct 1 MVQQLVFTEPRPSRPPRHLADLDAEGRAAAVAELRLPAFRAKQLAHQYYGRLIADPRAMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVR+R+A AMFP LLTA+AD+ CDAGQTRKTLWR DGT FESVLMRYP+RNTVCI
Sbjct 61 DLPAAVRERVAEAMFPRLLTAAADVACDAGQTRKTLWRGTDGTTFESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDF---GDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEI+EQVR+ AAALRDDF G RLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEIVEQVRSAAAALRDDFGPPGQRLSNVVFMGMG 180
>gi|240171730|ref|ZP_04750389.1| hypothetical protein MkanA1_20620 [Mycobacterium kansasii ATCC
12478]
Length=364
Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/177 (88%), Positives = 163/177 (93%), Gaps = 0/177 (0%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV ELMF+ PR G PPRHLADLDAAGRASAVAELGLPAFRAKQLAH Y+GRLIADPRQM+
Sbjct 1 MVGELMFEAPRRGMPPRHLADLDAAGRASAVAELGLPAFRAKQLAHHYFGRLIADPRQMS 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRD IA AMFP LLTA ++TCDAGQTRKTLWRAVDG ESVLMRYP+RNTVCI
Sbjct 61 DLPAAVRDVIAAAMFPTLLTAVREVTCDAGQTRKTLWRAVDGATVESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGLTRNLSTAEI+EQVRA AAA+RDDFGDRLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLTRNLSTAEIVEQVRAAAAAMRDDFGDRLSNVVFMGMG 177
>gi|254819036|ref|ZP_05224037.1| hypothetical protein MintA_03871 [Mycobacterium intracellulare
ATCC 13950]
Length=367
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/180 (83%), Positives = 161/180 (90%), Gaps = 3/180 (1%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
MV +L+F EPRPG+PPRHLADLDA GRA+AVAELGLPAFRAKQLAHQYYGRLIADPRQMT
Sbjct 1 MVQQLVFSEPRPGKPPRHLADLDADGRAAAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPA +RD IA MFP LLTA +++ CDAG+TRKTLWRA+DG ESVLMRYP+RNTVCI
Sbjct 61 DLPAGLRDAIADTMFPILLTAVSEVACDAGETRKTLWRALDGVTVESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFG---DRLSNVVFMGMG 177
SSQAGCGMACPFCATGQGGL+RNLSTAEILEQVRA AA LRDDFG RLSNVVFMGMG
Sbjct 121 SSQAGCGMACPFCATGQGGLSRNLSTAEILEQVRAAAAVLRDDFGPPSQRLSNVVFMGMG 180
>gi|120403214|ref|YP_953043.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
vanbaalenii PYR-1]
gi|205829819|sp|A1T787.1|RLMN_MYCVP RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|119956032|gb|ABM13037.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length=365
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/173 (81%), Positives = 151/173 (88%), Gaps = 0/173 (0%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR PPRH ADLD +GRA+AVAELGLPAFRAKQLA+QYYGRLIADP QMTDLPA
Sbjct 7 LVFDAPRRAMPPRHFADLDESGRAAAVAELGLPAFRAKQLANQYYGRLIADPTQMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVR+R+A A+FP L A+ +I CD+G+TRK LWRAVDGT FESVLMRYP RNTVCISSQA
Sbjct 67 AVRERVADALFPTLFGAAREIECDSGETRKVLWRAVDGTTFESVLMRYPDRNTVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEILEQVRA +A LRD G RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLKRNLSTAEILEQVRAASAELRDRDGGRLSNVVFMGMG 179
>gi|333991237|ref|YP_004523851.1| hypothetical protein JDM601_2597 [Mycobacterium sp. JDM601]
gi|333487205|gb|AEF36597.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=369
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/182 (78%), Positives = 153/182 (85%), Gaps = 5/182 (2%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
M +L+F PR PPRHLADLDAAGRA+AVAELGLPAFRA QLAHQYYGRL+ADP+QMT
Sbjct 1 MTQQLVFSAPRRALPPRHLADLDAAGRAAAVAELGLPAFRANQLAHQYYGRLVADPQQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPA VR +A A+FP LLTA+++I CDAG+TRKTLWRA D T FESVLMRYPRRNTVCI
Sbjct 61 DLPATVRASVAEALFPALLTAASEIECDAGETRKTLWRAHDNTKFESVLMRYPRRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD-----DFGDRLSNVVFMG 175
SSQAGCGMACPFCATGQ GLTRNLSTAEILEQVRA A LRD G RLSN+VFMG
Sbjct 121 SSQAGCGMACPFCATGQAGLTRNLSTAEILEQVRAAAVTLRDRDGARSSGVRLSNIVFMG 180
Query 176 MG 177
MG
Sbjct 181 MG 182
>gi|118472101|ref|YP_886882.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
smegmatis str. MC2 155]
gi|205829815|sp|A0QVE4.1|RLMN_MYCS2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|118173388|gb|ABK74284.1| radical SAM enzyme, Cfr family protein [Mycobacterium smegmatis
str. MC2 155]
Length=372
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/186 (70%), Positives = 152/186 (82%), Gaps = 9/186 (4%)
Query 1 MVPELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMT 60
M +L+F+ PR PP+HLADLD RA+AV ELGLPAFRAKQLA+QYYGRLIADP+QMT
Sbjct 1 MKQQLVFEAPRRAMPPQHLADLDETARAAAVTELGLPAFRAKQLANQYYGRLIADPQQMT 60
Query 61 DLPAAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCI 120
DLPAAVRD++A +FP L+ +I CDAG+TRKTLWRA+DG+ FESVLMRYP+RNTVCI
Sbjct 61 DLPAAVRDQVAEKLFPTLINPVREIQCDAGETRKTLWRAIDGSTFESVLMRYPQRNTVCI 120
Query 121 SSQAGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDF---------GDRLSNV 171
SSQAGCGMACPFCATGQGGL RNL+TAEILEQVRA ++ +R + G RLSN+
Sbjct 121 SSQAGCGMACPFCATGQGGLQRNLTTAEILEQVRAASSTMRAEHFGRTAGTAGGGRLSNI 180
Query 172 VFMGMG 177
VFMGMG
Sbjct 181 VFMGMG 186
>gi|145224701|ref|YP_001135379.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
gilvum PYR-GCK]
gi|205829813|sp|A4TC75.1|RLMN_MYCGI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|145217187|gb|ABP46591.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium gilvum PYR-GCK]
Length=365
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/211 (65%), Positives = 153/211 (73%), Gaps = 8/211 (3%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR PPRH ADL RA+AVA+LGLPAFR KQLA+QY+GRLI+DP QMTDLPA
Sbjct 7 LVFDAPRRALPPRHFADLADTERAAAVADLGLPAFRGKQLANQYFGRLISDPSQMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
VRD++ A+FP LL A+ +I CD G+TRK LWRAVD T FESVLMRYP RNTVCISSQA
Sbjct 67 GVRDQVGAALFPELLEAAREIECDRGETRKVLWRAVDKTTFESVLMRYPDRNTVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAGQLR 184
GCGMACPFCATGQGGL RNLSTAEILEQVR +A LRD G RLSN+VFMGMG
Sbjct 127 GCGMACPFCATGQGGLKRNLSTAEILEQVRFASAELRDREGGRLSNIVFMGMGEPLANYN 186
Query 185 QGVGRSSAHYRAAAVRFRDFGPRGDGVDGGS 215
+ V AA R P G G+ S
Sbjct 187 RVV--------AAVRRITASSPHGFGISARS 209
>gi|315445031|ref|YP_004077910.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium sp. Spyr1]
gi|315263334|gb|ADU00076.1| 23S rRNA m(2)A-2503 methyltransferase [Mycobacterium sp. Spyr1]
Length=365
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/211 (65%), Positives = 153/211 (73%), Gaps = 8/211 (3%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR PPRH ADL RA+AVA+LGLPAFR KQLA+QY+GRLI+DP QMTDLPA
Sbjct 7 LVFDAPRRALPPRHFADLADTERAAAVADLGLPAFRGKQLANQYFGRLISDPSQMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
VRD++A A+FP LL + +I CD G+TRK LWRAVD T FESVLMRYP RNTVCISSQA
Sbjct 67 GVRDQVAAALFPALLETAREIECDRGETRKVLWRAVDKTTFESVLMRYPDRNTVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAGQLR 184
GCGMACPFCATGQGGL RNLSTAEILEQVR +A LRD G RLSN+VFMGMG
Sbjct 127 GCGMACPFCATGQGGLKRNLSTAEILEQVRFASAELRDRDGGRLSNIVFMGMGEPLANYN 186
Query 185 QGVGRSSAHYRAAAVRFRDFGPRGDGVDGGS 215
+ V AA R P G G+ S
Sbjct 187 RVV--------AAVRRITASSPHGFGISARS 209
>gi|108798974|ref|YP_639171.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. MCS]
gi|119868089|ref|YP_938041.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. KMS]
gi|126434574|ref|YP_001070265.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
sp. JLS]
6 more sequence titles
Length=374
Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/182 (76%), Positives = 150/182 (83%), Gaps = 9/182 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR +PPRH ADLDA RA+AVAELGLPAFRAKQLA QYYGRL ADP+QMTDLPA
Sbjct 7 LVFDAPRRAKPPRHFADLDATARAAAVAELGLPAFRAKQLATQYYGRLTADPQQMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVR+++A A+FP+LLTA +I DAG+TRK LWRAVDGT FESVLMRY RNTVCISSQA
Sbjct 67 AVREQVAEALFPDLLTAVREIETDAGETRKVLWRAVDGTTFESVLMRYSDRNTVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD---------RLSNVVFMG 175
GCGMACPFCATGQGGL RNLSTAEILEQVRA A LRD G+ RLSN+VFMG
Sbjct 127 GCGMACPFCATGQGGLQRNLSTAEILEQVRAAAVELRDRDGEGIAPAARGGRLSNIVFMG 186
Query 176 MG 177
MG
Sbjct 187 MG 188
>gi|226366029|ref|YP_002783812.1| ribosomal RNA large subunit methyltransferase N [Rhodococcus
opacus B4]
gi|254807198|sp|C1B2V0.1|RLMN_RHOOB RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|226244519|dbj|BAH54867.1| putative rRNA methyltransferase [Rhodococcus opacus B4]
Length=369
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/179 (71%), Positives = 141/179 (79%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F PR G PP+HLADLD+ R AV ELGLP FRA QLA QYY RL ADP +MTDLPA
Sbjct 7 LVFTAPRRGMPPKHLADLDSTERREAVKELGLPGFRADQLARQYYARLEADPEKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVR+++ A+FP LLTA + CD G TRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 AVREQVGAALFPTLLTAVKHLACDGGDTRKTLWKANDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA AAALRD GD RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLQRNLSTAEIVDQVRAAAAALRD--GDVHGGPGRLSNVVFMGMG 183
>gi|111023545|ref|YP_706517.1| ribosomal RNA large subunit methyltransferase N [Rhodococcus
jostii RHA1]
gi|123144166|sp|Q0S277.1|RLMN_RHOSR RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|110823075|gb|ABG98359.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=369
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/179 (71%), Positives = 141/179 (79%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F PR G PP+HLADLD+A R AV ELGLP FRA QLA QYY RL ADP +MTDLPA
Sbjct 7 LVFTAPRRGMPPKHLADLDSAERREAVKELGLPGFRADQLARQYYARLEADPEKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVR+++ A+FP LLT + CD G TRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 AVREQVGAALFPTLLTPVKHLACDGGDTRKTLWKANDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA AAALRD GD RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLQRNLSTAEIVDQVRAAAAALRD--GDVHGGPGRLSNVVFMGMG 183
>gi|226306037|ref|YP_002765997.1| rRNA methyltransferase [Rhodococcus erythropolis PR4]
gi|259491995|sp|C0ZY23.1|RLMN_RHOE4 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|226185154|dbj|BAH33258.1| putative rRNA methyltransferase [Rhodococcus erythropolis PR4]
Length=369
Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/179 (70%), Positives = 142/179 (80%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F P+ G PPRHLADLD+A R AV ELGLPAFRA QLA QYY RL ADP +MTDLPA
Sbjct 7 LVFTAPKRGMPPRHLADLDSAERKEAVKELGLPAFRADQLARQYYARLEADPEKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+VR+++ ++FP LLT + CD+G TRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 SVREKVGESLFPTLLTPIKHLACDSGDTRKTLWKAHDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR AAA+RD GD RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLDRNLSTAEIVDQVREAAAAMRD--GDVAGGPGRLSNVVFMGMG 183
>gi|325673450|ref|ZP_08153141.1| cfr family radical SAM enzyme [Rhodococcus equi ATCC 33707]
gi|325555471|gb|EGD25142.1| cfr family radical SAM enzyme [Rhodococcus equi ATCC 33707]
Length=369
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 140/177 (80%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F+ PR G PPRHLADLDA R AV ELGLP FRA QLA QYYGRL AD +MTDLPA
Sbjct 7 LVFNAPRRGMPPRHLADLDADERKEAVKELGLPGFRADQLARQYYGRLEADADKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+R+++ A+FP LL + CDAGQTRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 GMREKVGAALFPRLLDVVKHVACDAGQTRKTLWKANDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD----RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA AAALRD + RLSN+VFMGMG
Sbjct 127 GCGMACPFCATGQGGLDRNLSTAEIVDQVRAAAAALRDGEVEGGPGRLSNIVFMGMG 183
>gi|312139245|ref|YP_004006581.1| radical sam protein [Rhodococcus equi 103S]
gi|311888584|emb|CBH47896.1| radical SAM protein [Rhodococcus equi 103S]
Length=369
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/177 (71%), Positives = 140/177 (80%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F+ PR G PPRHLADLDA R AV ELGLP FRA QLA QYYGRL AD +MTDLPA
Sbjct 7 LVFNAPRRGMPPRHLADLDADERKEAVKELGLPGFRADQLARQYYGRLEADADKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+R+++ A+FP LL + CDAGQTRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 GMREKVGAALFPRLLDVVKHVACDAGQTRKTLWKANDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD----RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA AAALRD + RLSN+VFMGMG
Sbjct 127 GCGMACPFCATGQGGLDRNLSTAEIVDQVRAAAAALRDGEVEGGPGRLSNIVFMGMG 183
>gi|229491476|ref|ZP_04385300.1| radical SAM enzyme, Cfr family [Rhodococcus erythropolis SK121]
gi|229321761|gb|EEN87558.1| radical SAM enzyme, Cfr family [Rhodococcus erythropolis SK121]
Length=369
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/179 (69%), Positives = 142/179 (80%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F P+ G PPRHLADLD+A R AV ELGLPAFRA QLA QYY RL ADP +MTDLPA
Sbjct 7 LVFTAPKRGMPPRHLADLDSAERKEAVKELGLPAFRADQLARQYYARLEADPEKMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+VR+++ ++FP LLT + CD+G TRKTLW+A DGT+ ESVLMRYP R T+CISSQA
Sbjct 67 SVREKVGESLFPTLLTPIKHLACDSGDTRKTLWKAHDGTLLESVLMRYPDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR AAA+RD G+ RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLDRNLSTAEIVDQVREAAAAMRD--GEVAGGPGRLSNVVFMGMG 183
>gi|262202048|ref|YP_003273256.1| radical SAM protein [Gordonia bronchialis DSM 43247]
gi|262085395|gb|ACY21363.1| radical SAM enzyme, Cfr family [Gordonia bronchialis DSM 43247]
Length=368
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/176 (72%), Positives = 139/176 (79%), Gaps = 3/176 (1%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR GRPP H ADLDA R +AVAELGLP FRA QLA QYY RL D +MTDLPA
Sbjct 6 LVFDAPRRGRPPTHFADLDAQARVAAVAELGLPKFRANQLARQYYARLNGDVAEMTDLPA 65
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+ RD + A+FP LLT I+CD G TRKTLWR DGT+ ESVLMRYP RNT+CISSQA
Sbjct 66 SARDSVGAALFPPLLTPVRHISCDDGSTRKTLWRLHDGTLLESVLMRYPDRNTLCISSQA 125
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD-DFGD--RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR A +LRD +FG+ RLSNVVFMGMG
Sbjct 126 GCGMACPFCATGQGGLDRNLSTAEIVDQVRCAARSLRDGEFGEPGRLSNVVFMGMG 181
>gi|326382905|ref|ZP_08204595.1| ribosomal RNA large subunit methyltransferase N [Gordonia neofelifaecis
NRRL B-59395]
gi|326198495|gb|EGD55679.1| ribosomal RNA large subunit methyltransferase N [Gordonia neofelifaecis
NRRL B-59395]
Length=371
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/176 (69%), Positives = 137/176 (78%), Gaps = 3/176 (1%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G PP+H ADLD GR AVA+LGLP FRA QLA QYYGRL AD +MTDLPA
Sbjct 9 LVFDAPKRGLPPKHFADLDEQGRIDAVADLGLPKFRANQLAKQYYGRLNADVDEMTDLPA 68
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
RD + +FP L+T I+CD TRKTLWR DGT+ ESVLMRYP RNT+CISSQA
Sbjct 69 GKRDAVGEKLFPTLMTPVRHISCDDDSTRKTLWRLHDGTLLESVLMRYPERNTLCISSQA 128
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD-DFGD--RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA A ALRD + G+ RLSN+VFMGMG
Sbjct 129 GCGMACPFCATGQGGLDRNLSTAEIVDQVRAAARALRDGEVGEPGRLSNIVFMGMG 184
>gi|54026096|ref|YP_120338.1| ribosomal RNA large subunit methyltransferase N [Nocardia farcinica
IFM 10152]
gi|81373742|sp|Q5YS67.1|RLMN_NOCFA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|54017604|dbj|BAD58974.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=369
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/177 (72%), Positives = 141/177 (80%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR G PPRHLADLDA R +AVAELGLP FRA Q+A QYYGRL ADP +MTDLPA
Sbjct 7 LVFDAPRRGMPPRHLADLDAEQRRAAVAELGLPKFRADQIARQYYGRLEADPARMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
VR++I A+FP LL + CD G+TRKTLWRA DGT+ ESVLMRY RNT+CISSQA
Sbjct 67 PVREQIGAALFPRLLDVVKHVACDDGRTRKTLWRAGDGTLLESVLMRYADRNTLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDF----GDRLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA AAALRD RLSN+VFMGMG
Sbjct 127 GCGMACPFCATGQGGLNRNLSTAEIVDQVRAAAAALRDGAVAGGPGRLSNIVFMGMG 183
>gi|343926733|ref|ZP_08766230.1| ribosomal RNA large subunit methyltransferase N [Gordonia alkanivorans
NBRC 16433]
gi|343763332|dbj|GAA13156.1| ribosomal RNA large subunit methyltransferase N [Gordonia alkanivorans
NBRC 16433]
Length=443
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/176 (70%), Positives = 137/176 (78%), Gaps = 3/176 (1%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G PP H ADLDAAGR +A+AELGLP FRA QLA QYY RL D +MTDLPA
Sbjct 81 LVFDAPKRGLPPTHFADLDAAGRVAALAELGLPKFRADQLARQYYARLNGDVEEMTDLPA 140
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A RD + +FP LLT I+CD TRKTLWR DGT+ ESVLMRY RNT+CISSQA
Sbjct 141 ASRDAVREKLFPQLLTPVRHISCDDDSTRKTLWRLHDGTLLESVLMRYTERNTLCISSQA 200
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD-DFGD--RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVRA A ALRD + G+ RLSNVVFMGMG
Sbjct 201 GCGMACPFCATGQGGLDRNLSTAEIVDQVRAAARALRDGELGEPGRLSNVVFMGMG 256
>gi|319948052|ref|ZP_08022226.1| ribosomal RNA large subunit methyltransferase N [Dietzia cinnamea
P4]
gi|319438291|gb|EFV93237.1| ribosomal RNA large subunit methyltransferase N [Dietzia cinnamea
P4]
Length=369
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/179 (69%), Positives = 141/179 (79%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR G PPRH ADLD+ GRA A+ +LG+P+FR KQLA+QY+GRL ADPR+MTDLPA
Sbjct 7 LVFDAPRRGLPPRHFADLDSDGRAVAMGDLGVPSFRGKQLANQYFGRLEADPREMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+RDR+ +FP L T+ ++ D G TRKTLW+ DG++ ESVLMRYP R TVCISSQA
Sbjct 67 DLRDRVGQELFPPLTTSLRHVSADEGTTRKTLWKLHDGSLVESVLMRYPDRATVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEILEQVR A ALRD G+ RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLQRNLSTAEILEQVRVAARALRD--GEIPGGPGRLSNVVFMGMG 183
>gi|169630257|ref|YP_001703906.1| ribosomal RNA large subunit methyltransferase N [Mycobacterium
abscessus ATCC 19977]
gi|169242224|emb|CAM63252.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=373
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/177 (69%), Positives = 132/177 (75%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR PPRHLAD+ V ELGLPAFRAKQ+A+QYYGRL+ DP MTDLPA
Sbjct 10 LVFDAPRRAMPPRHLADMSLEQSRDVVTELGLPAFRAKQIANQYYGRLVGDPATMTDLPA 69
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
R +A A+FP LL I CDAG TRKTLWR DG+ ESVLMRYP RNT+CISSQA
Sbjct 70 GARGGVAEALFPRLLEPLRQIACDAGDTRKTLWRLHDGSTVESVLMRYPDRNTLCISSQA 129
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDF----GDRLSNVVFMGMG 177
GCGMACPFCATGQGGLTRNLS AEILEQVR AA+LRD RLSN+VFMGMG
Sbjct 130 GCGMACPFCATGQGGLTRNLSAAEILEQVRDAAASLRDGQLPGGPGRLSNIVFMGMG 186
>gi|300858725|ref|YP_003783708.1| hypothetical protein cpfrc_01308 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686179|gb|ADK29101.1| hypothetical protein cpfrc_01308 [Corynebacterium pseudotuberculosis
FRC41]
Length=213
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/178 (64%), Positives = 134/178 (76%), Gaps = 1/178 (0%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F +PR PP+H AD R SA+ ELGLP FRA Q+A YYGRL ADPR MTDLP
Sbjct 37 KLNFSQPRRSMPPKHFADYTVEERISALKELGLPKFRANQIARHYYGRLEADPRTMTDLP 96
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
A VR+++ +FP L+ I DAG+T+KTLW+ DGT+ ESVLMRYP R T+CISSQ
Sbjct 97 AGVREKVQEKLFPVLMNPIRAIETDAGETQKTLWQLHDGTLLESVLMRYPNRATLCISSQ 156
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAG 181
AGCGMACPFCATGQGGL RNLSTAEI++QVRA +A + + G RLSN+VFMGMGGA G
Sbjct 157 AGCGMACPFCATGQGGLDRNLSTAEIVDQVRAASATMNAE-GGRLSNIVFMGMGGAIG 213
>gi|333919256|ref|YP_004492837.1| ribosomal RNA large subunit methyltransferase N [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481477|gb|AEF40037.1| Ribosomal RNA large subunit methyltransferase N [Amycolicicoccus
subflavus DQS3-9A1]
Length=385
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/177 (68%), Positives = 136/177 (77%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+F+ PR G PPRH ADLD R AVA+LG+ FRA QLA YYGRL AD MTDLPA
Sbjct 23 LVFNAPRRGMPPRHFADLDRDERRKAVADLGMQPFRADQLARHYYGRLEADVAAMTDLPA 82
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
VR++I +FP LL+ + CDAG+TRKTLW+A DGT+ ESVLMRY R TVCISSQA
Sbjct 83 NVREKIGETLFPPLLSTVRHLACDAGETRKTLWKAHDGTLLESVLMRYTDRATVCISSQA 142
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD-DFG---DRLSNVVFMGMG 177
GCGMACPFCATGQ GLTRNLSTAEI++QVRA AAA+RD + G RLSNVVFMGMG
Sbjct 143 GCGMACPFCATGQAGLTRNLSTAEIVDQVRAAAAAMRDGEVGGGPGRLSNVVFMGMG 199
>gi|225021120|ref|ZP_03710312.1| hypothetical protein CORMATOL_01132 [Corynebacterium matruchotii
ATCC 33806]
gi|224946120|gb|EEG27329.1| hypothetical protein CORMATOL_01132 [Corynebacterium matruchotii
ATCC 33806]
Length=389
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/184 (62%), Positives = 134/184 (73%), Gaps = 1/184 (0%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L F PR PP+H ADL R +A+A+LGLP FRA QLA YYGRL ADPR MTDLPA
Sbjct 28 LNFSTPRRAMPPKHFADLTPDQRIAALADLGLPKFRANQLAKHYYGRLEADPRTMTDLPA 87
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVRD +A A+FP L+T +T D G+T KTLWR DGT+ ESVLMRYP R T+CISSQA
Sbjct 88 AVRDAVAEALFPTLMTPVRQVTADDGETHKTLWRLHDGTLLESVLMRYPNRATLCISSQA 147
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAGQLR 184
GCGMACPFCATGQ GL RNLST EI++QVR+ A + + G+RLSN+VFMGMG +
Sbjct 148 GCGMACPFCATGQAGLDRNLSTGEIIDQVRSAARTMAAE-GNRLSNIVFMGMGEPLANYK 206
Query 185 QGVG 188
+ V
Sbjct 207 RVVS 210
>gi|305680861|ref|ZP_07403668.1| 23S rRNA m2A2503 methyltransferase [Corynebacterium matruchotii
ATCC 14266]
gi|305659066|gb|EFM48566.1| 23S rRNA m2A2503 methyltransferase [Corynebacterium matruchotii
ATCC 14266]
Length=385
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/184 (62%), Positives = 133/184 (73%), Gaps = 1/184 (0%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L F PR PP+H ADL R +A+A+LGLP FRA QLA YYGRL ADPR MTDLPA
Sbjct 24 LNFSTPRRAMPPKHFADLTPDQRIAALADLGLPKFRANQLAKHYYGRLEADPRTMTDLPA 83
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
AVRD +A A+FP L+T +T D G+T KTLWR DGT+ ESVLMRYP R T+CISSQA
Sbjct 84 AVRDAVAEALFPTLMTPVRQVTADDGETHKTLWRLHDGTLLESVLMRYPNRATLCISSQA 143
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAGQLR 184
GCGMACPFCATGQ GL RNLST EI++QVR+ A + + G RLSN+VFMGMG +
Sbjct 144 GCGMACPFCATGQAGLDRNLSTGEIIDQVRSAARTMVAE-GSRLSNIVFMGMGEPLANYK 202
Query 185 QGVG 188
+ V
Sbjct 203 RVVS 206
>gi|300783906|ref|YP_003764197.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei U32]
gi|299793420|gb|ADJ43795.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei U32]
gi|340525301|gb|AEK40506.1| ribosomal RNA large subunit methyltransferase N [Amycolatopsis
mediterranei S699]
Length=368
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/211 (58%), Positives = 144/211 (69%), Gaps = 12/211 (5%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G PPRHLADL + RA+AVAELG FRAKQL++ Y+ RL DP +MTD+PA
Sbjct 6 LVFDAPKRGLPPRHLADLSVSERAAAVAELGEKPFRAKQLSNHYFSRLTVDPEEMTDIPA 65
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R R+ + P LLT + D G TRKTLWRA DGT+ ESVLMRYP R T+CISSQA
Sbjct 66 ASRQRLVADLMPTLLTEVRALAADDGATRKTLWRAHDGTLLESVLMRYPDRATLCISSQA 125
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFG----DRLSNVVFMGMGGAA 180
GCGMACPFCATGQGGL RNLSTAEI++QVR+ AA +RD RLSN+VFMGMG
Sbjct 126 GCGMACPFCATGQGGLDRNLSTAEIVDQVRSAAAVMRDGAMPGGPGRLSNIVFMGMGEPL 185
Query 181 GQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
++ V AA R D P G G+
Sbjct 186 ANYKRVV--------AAVRRITDPAPGGLGI 208
>gi|337291022|ref|YP_004630043.1| hypothetical protein CULC22_01414 [Corynebacterium ulcerans BR-AD22]
gi|334697135|gb|AEG81932.1| hypothetical protein CULC809_01400 [Corynebacterium ulcerans
809]
gi|334699328|gb|AEG84124.1| hypothetical protein CULC22_01414 [Corynebacterium ulcerans BR-AD22]
Length=396
Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/185 (61%), Positives = 134/185 (73%), Gaps = 1/185 (0%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F +PR PP+H AD R SA+ ELGLP FRA Q+A YYGRL ADPR MTDLP
Sbjct 37 KLNFSQPRRSMPPKHFADYSVEERISALNELGLPKFRANQIARHYYGRLEADPRTMTDLP 96
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
AA R ++ +FP L+T I DAG+T+KTLW+ DGT+ ESVLMRYP R T+CISSQ
Sbjct 97 AAARVKVQEKLFPTLMTPVRAIETDAGETQKTLWKLHDGTLLESVLMRYPNRATLCISSQ 156
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMGGAAGQL 183
AGCGMACPFCATGQGGL RNLSTAEI++QVRA +A + + G RLSN+VFMGMG
Sbjct 157 AGCGMACPFCATGQGGLDRNLSTAEIVDQVRAASATMTAE-GGRLSNIVFMGMGEPLANY 215
Query 184 RQGVG 188
++ V
Sbjct 216 KRVVS 220
>gi|302525208|ref|ZP_07277550.1| ribosomal RNA large subunit methyltransferase N [Streptomyces
sp. AA4]
gi|302434103|gb|EFL05919.1| ribosomal RNA large subunit methyltransferase N [Streptomyces
sp. AA4]
Length=368
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/211 (58%), Positives = 143/211 (68%), Gaps = 12/211 (5%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G PPRHLADL A RA AV ELG AFRAKQL++ Y+ RL DP +MTD+PA
Sbjct 6 LVFDAPKRGLPPRHLADLTVAERAEAVVELGEKAFRAKQLSNHYFSRLTVDPAEMTDIPA 65
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R+++ + P LLT + D G TRKTLWRA DGT+ ESVLMRYP R T+CISSQA
Sbjct 66 ASREKLVADLMPPLLTEVRALAADGGATRKTLWRAHDGTLLESVLMRYPDRATLCISSQA 125
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFG----DRLSNVVFMGMGGAA 180
GCGMACPFCATGQGGL RNLSTAEI++QVR AA +RD RLSN+VFMGMG
Sbjct 126 GCGMACPFCATGQGGLDRNLSTAEIVDQVRDAAAVMRDGSMPGGPGRLSNIVFMGMGEPL 185
Query 181 GQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
++ V AA R D P G G+
Sbjct 186 ANYKRVV--------AAVRRITDPSPAGLGI 208
>gi|237785746|ref|YP_002906451.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758658|gb|ACR17908.1| conserved hypothetical protein [Corynebacterium kroppenstedtii
DSM 44385]
Length=394
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/212 (58%), Positives = 143/212 (68%), Gaps = 12/212 (5%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F PR G+PP H ADL + AV +LGLPAFRA QLA YYGR A P MTDLP
Sbjct 28 QLKFAAPRRGKPPTHFADLTVDEQKQAVKDLGLPAFRANQLARHYYGRFEASPETMTDLP 87
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
AA R+ + A+FP L+T +I+CD G TRKTLW+ DGT+ ESVLMRYP R T+CISSQ
Sbjct 88 AAAREPVQKALFPELMTEVRNISCDQGMTRKTLWKLHDGTLLESVLMRYPGRATLCISSQ 147
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAAL-RDDFG---DRLSNVVFMGMGGA 179
AGCGMACPFCATGQGGL RNLST EI++QVRA AAA+ R D RLSNVVFMGMG
Sbjct 148 AGCGMACPFCATGQGGLHRNLSTGEIVDQVRAAAAAMSRGDVAGGKGRLSNVVFMGMGEP 207
Query 180 AGQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
++ V +A + D PRG G+
Sbjct 208 LANYKRVV--------SAVRQITDPSPRGFGL 231
>gi|334564570|ref|ZP_08517561.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
bovis DSM 20582]
Length=372
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/178 (65%), Positives = 132/178 (75%), Gaps = 4/178 (2%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F P+ G PP HLAD+ AV LGLP FRA Q+A QYYGRL ADPR MTDLP
Sbjct 6 QLQFSAPKKGMPPTHLADMTDDQVREAVTGLGLPGFRANQIARQYYGRLAADPRSMTDLP 65
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
A RD + A+FP L+T +I+CD G+TRKTLWR DGT+ ESVLMRYP R T+CISSQ
Sbjct 66 EATRDSVREALFPQLMTPVNEISCDGGETRKTLWRLHDGTLLESVLMRYPDRATLCISSQ 125
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD---DFGD-RLSNVVFMGMG 177
AGCGMACPFCATGQGGL RNLS EI+EQVR AA +RD + G+ RL+N+VFMGMG
Sbjct 126 AGCGMACPFCATGQGGLDRNLSVGEIVEQVRTAAADMRDGRVEGGEGRLTNIVFMGMG 183
>gi|213964408|ref|ZP_03392608.1| radical SAM enzyme, Cfr family [Corynebacterium amycolatum SK46]
gi|213952601|gb|EEB63983.1| radical SAM enzyme, Cfr family [Corynebacterium amycolatum SK46]
Length=369
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/173 (66%), Positives = 131/173 (76%), Gaps = 1/173 (0%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
++ PR G P H ADLD R +AV ELGLPAFRA Q+A YYGRL ADP MTDLP
Sbjct 11 IVLKAPRRGMPATHFADLDVEERKAAVKELGLPAFRADQIARHYYGRLEADPMTMTDLPE 70
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R ++ ++FP LLT ITCD G+TRKTLWRA DGT+ ESVLM+YP R T+CISSQA
Sbjct 71 ADRQKVKDSLFPPLLTPVRHITCDDGETRKTLWRAGDGTLLESVLMKYPGRATLCISSQA 130
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR AA + + G RL+N+VFMGMG
Sbjct 131 GCGMACPFCATGQGGLQRNLSTAEIVDQVREAAATMAAE-GGRLTNIVFMGMG 182
>gi|336325814|ref|YP_004605780.1| hypothetical protein CRES_1261 [Corynebacterium resistens DSM
45100]
gi|336101796|gb|AEI09616.1| conserved hypothetical protein [Corynebacterium resistens DSM
45100]
Length=371
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/178 (65%), Positives = 134/178 (76%), Gaps = 4/178 (2%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L+F+ PR G+PP HLAD+ AVAELGLP FRA QLA QYYGRL+ADP +MTDLP
Sbjct 6 KLIFNAPRRGKPPVHLADMSREEVKEAVAELGLPKFRADQLARQYYGRLLADPEEMTDLP 65
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
R + A+FP L+T + D G+TRKTLWR DGT+ ESVLMRYP R T+CISSQ
Sbjct 66 ENKRGPVREALFPQLMTPLRHLNTDDGETRKTLWRLFDGTLLESVLMRYPGRATLCISSQ 125
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD---DFGD-RLSNVVFMGMG 177
AGCGMACPFCATGQGGL RNLS E++EQVR AAA+RD + G+ RLSN+VFMGMG
Sbjct 126 AGCGMACPFCATGQGGLDRNLSVGEMVEQVRHAAAAMRDGEVEGGEGRLSNIVFMGMG 183
>gi|284032622|ref|YP_003382553.1| radical SAM enzyme, Cfr family [Kribbella flavida DSM 17836]
gi|283811915|gb|ADB33754.1| radical SAM enzyme, Cfr family [Kribbella flavida DSM 17836]
Length=372
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/212 (56%), Positives = 147/212 (70%), Gaps = 13/212 (6%)
Query 5 LMFDEPR-PGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
L+FDEPR +PPRHLADL R +AV LG PAFRAKQL++ Y+ RL++DP +MTDLP
Sbjct 7 LVFDEPRRAKKPPRHLADLSGEERRAAVTALGEPAFRAKQLSNHYFSRLVSDPAEMTDLP 66
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
AA RD++ + P LLT D+ CD GQTRK+LW+ +DG++ ESVLMRY R T+C+SSQ
Sbjct 67 AASRDKLVAELMPPLLTKVRDLECDNGQTRKSLWKLLDGSLVESVLMRYTDRTTMCVSSQ 126
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAAL-RDDFG---DRLSNVVFMGMGGA 179
AGCGMACPFCATGQ GLTRN++TAEI+EQV GA AL R + R++N+VFMGMG
Sbjct 127 AGCGMACPFCATGQAGLTRNMTTAEIVEQVVDGARALSRGEIAGGPGRVNNIVFMGMGEP 186
Query 180 AGQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
+ +G A RF D P G G+
Sbjct 187 MANYKAVIG--------AVRRFTDPSPEGLGI 210
>gi|257055048|ref|YP_003132880.1| ribosomal RNA large subunit methyltransferase N [Saccharomonospora
viridis DSM 43017]
gi|256584920|gb|ACU96053.1| radical SAM enzyme, Cfr family [Saccharomonospora viridis DSM
43017]
Length=370
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/216 (57%), Positives = 140/216 (65%), Gaps = 17/216 (7%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR G P RHLADL RA AV LG FRAKQL+H Y+ RL DP MTD+PA
Sbjct 3 LVFDAPRRGLPRRHLADLTVTERAEAVVALGEKPFRAKQLSHHYFSRLTVDPEAMTDIPA 62
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R R+ + P LLT + CD G TRKTLWRA DGT+ ESVLMRYP R T+CISSQA
Sbjct 63 ASRRRLVDELMPPLLTQVRAVDCDGGSTRKTLWRAHDGTLVESVLMRYPDRATLCISSQA 122
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD---------RLSNVVFMG 175
GCGMACPFCATGQGGLTRNLSTAEI++QVRA AA +RD RLSN+VFMG
Sbjct 123 GCGMACPFCATGQGGLTRNLSTAEIVDQVRAAAAVMRDGLMPGPDGAPKPGRLSNIVFMG 182
Query 176 MGGAAGQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
MG ++ + AA R D P G G+
Sbjct 183 MGEPLANYKRVL--------AAVRRITDPPPAGLGI 210
>gi|134102464|ref|YP_001108125.1| ribosomal RNA large subunit methyltransferase N [Saccharopolyspora
erythraea NRRL 2338]
gi|291004145|ref|ZP_06562118.1| ribosomal RNA large subunit methyltransferase N [Saccharopolyspora
erythraea NRRL 2338]
gi|205829872|sp|A4FMC5.1|RLMN_SACEN RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|133915087|emb|CAM05200.1| predicted Fe-S-cluster redox enzyme [Saccharopolyspora erythraea
NRRL 2338]
Length=369
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/213 (58%), Positives = 143/213 (68%), Gaps = 16/213 (7%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD PR G PPRHLADL A R +AV ELG FRA+QLAH Y+GRL AD MTD+PA
Sbjct 7 LVFDAPRRGMPPRHLADLSADERRAAVTELGEKPFRARQLAHHYFGRLNADVESMTDIPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
R ++ + P LLT ++ D G TRKTLWRA DGT+ ESVLMRYP R TVCISSQA
Sbjct 67 GSRAKLGADLLPTLLTPVRNLDTDEGTTRKTLWRAHDGTLLESVLMRYPDRATVCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMGG 178
GCGMACPFCATGQGGL RNLSTAEI++QVR+ AA +RD G+ RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLQRNLSTAEIVDQVRSAAAMMRD--GEVPGGPGRLSNVVFMGMGE 184
Query 179 AAGQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
++ + A R D P G G+
Sbjct 185 PLANYKRVIN--------AVHRICDPAPEGLGL 209
>gi|38234081|ref|NP_939848.1| ribosomal RNA large subunit methyltransferase N [Corynebacterium
diphtheriae NCTC 13129]
gi|81564752|sp|Q6NGK9.1|RLMN_CORDI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|38200343|emb|CAE50029.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=368
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/173 (64%), Positives = 131/173 (76%), Gaps = 1/173 (0%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L FD+PR PP+H ADL A R A+ ELGLP FRA Q+A YYGRL ADP MTDLPA
Sbjct 10 LNFDKPRRFMPPKHFADLSADERIDALKELGLPKFRANQIARHYYGRLEADPSTMTDLPA 69
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R+++ A+FP L+ + D G+T+KTLW+ DGT+ ESVLMRYP R T+CISSQA
Sbjct 70 AAREKVKDALFPQLMQPVRAVQADDGETQKTLWKLHDGTLLESVLMRYPNRATLCISSQA 129
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGDRLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLST EI++QVRA +A ++ + G RLSN+VFMGMG
Sbjct 130 GCGMACPFCATGQGGLDRNLSTGEIVDQVRAASATMQAE-GGRLSNIVFMGMG 181
>gi|269127610|ref|YP_003300980.1| radical SAM enzyme, Cfr family [Thermomonospora curvata DSM 43183]
gi|268312568|gb|ACY98942.1| radical SAM enzyme, Cfr family [Thermomonospora curvata DSM 43183]
Length=388
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/212 (58%), Positives = 141/212 (67%), Gaps = 12/212 (5%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F PR +PPRHLADL A R +AVAELG FRA+QL+ Y+ RL+ DP QMTDLP
Sbjct 27 KLTFVAPRRAKPPRHLADLTPAERRAAVAELGEKPFRAQQLSRHYFTRLVDDPAQMTDLP 86
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
AAVR+ +A + P LLT + CD G TRKTLWRA DGT+ ESVLMRYP R T+C+SSQ
Sbjct 87 AAVREHLAAELLPTLLTEVRALDCDGGATRKTLWRAFDGTLIESVLMRYPDRITMCVSSQ 146
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAAL-RDDFG---DRLSNVVFMGMGGA 179
AGCGM CPFCATGQ GLTRNLST EI+EQV AGA AL R R+SN+VFMGMG
Sbjct 147 AGCGMNCPFCATGQAGLTRNLSTGEIVEQVVAGARALARGKIAGGPGRISNIVFMGMGEP 206
Query 180 AGQLRQGVGRSSAHYRAAAVRFRDFGPRGDGV 211
+ +G A R D P G G+
Sbjct 207 LANYKAVLG--------AIRRITDPAPDGLGI 230
>gi|256379897|ref|YP_003103557.1| ribosomal RNA large subunit methyltransferase N [Actinosynnema
mirum DSM 43827]
gi|255924200|gb|ACU39711.1| radical SAM enzyme, Cfr family [Actinosynnema mirum DSM 43827]
Length=368
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/177 (65%), Positives = 131/177 (75%), Gaps = 4/177 (2%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G PPRHLADL A R AVA LG FRA QL++ Y+GRL DP MTD+PA
Sbjct 6 LVFDAPKRGLPPRHLADLTAEQRREAVASLGEQPFRANQLSNHYFGRLTVDPDAMTDIPA 65
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
A R+++ G + P L T + DAG TRKTL RA DGT+ ESVLMRYP R T+CISSQA
Sbjct 66 AAREKLVGDLMPPLWTEVRSVEADAGTTRKTLLRAHDGTLVESVLMRYPDRATLCISSQA 125
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDF----GDRLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR GAAA+RD RLSN+VFMGMG
Sbjct 126 GCGMACPFCATGQGGLQRNLSTAEIVDQVRRGAAAMRDGLLPGGPGRLSNIVFMGMG 182
>gi|172040504|ref|YP_001800218.1| hypothetical protein cur_0824 [Corynebacterium urealyticum DSM
7109]
gi|171851808|emb|CAQ04784.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
7109]
Length=370
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/178 (63%), Positives = 126/178 (71%), Gaps = 4/178 (2%)
Query 4 ELMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLP 63
+L F PR G PP+H ADL A AV ELGLP FRAKQL +QYYGRL DP +MTDLP
Sbjct 6 KLNFSAPRRGLPPKHFADLTAEQVEEAVVELGLPKFRAKQLYNQYYGRLEGDPLEMTDLP 65
Query 64 AAVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQ 123
A R + +FP L+T + D G+TRKTLWR DGT+ ESVLMRYP R T+CISSQ
Sbjct 66 EASRQAVKEKLFPALMTPLRKLDADDGETRKTLWRLHDGTLLESVLMRYPGRATLCISSQ 125
Query 124 AGCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRD----DFGDRLSNVVFMGMG 177
AGCGMACPFCATGQGGL RNLS EI+EQVR A A+RD RLSN+VFMGMG
Sbjct 126 AGCGMACPFCATGQGGLDRNLSVGEIVEQVRNAARAMRDGEVAGIEGRLSNIVFMGMG 183
>gi|296139393|ref|YP_003646636.1| radical SAM enzyme, Cfr family [Tsukamurella paurometabola DSM
20162]
gi|296027527|gb|ADG78297.1| radical SAM enzyme, Cfr family [Tsukamurella paurometabola DSM
20162]
Length=371
Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/179 (64%), Positives = 130/179 (73%), Gaps = 8/179 (4%)
Query 5 LMFDEPRPGRPPRHLADLDAAGRASAVAELGLPAFRAKQLAHQYYGRLIADPRQMTDLPA 64
L+FD P+ G+PPRHLADL AV +LGLP FRA QLA YYGRL AD MTDLPA
Sbjct 7 LVFDAPKRGKPPRHLADLTDDELQQAVVDLGLPKFRANQLARHYYGRLEADAATMTDLPA 66
Query 65 AVRDRIAGAMFPNLLTASADITCDAGQTRKTLWRAVDGTMFESVLMRYPRRNTVCISSQA 124
+ R + A+ P L++ I D+G TRKTLWR DGT+ ESVLMRY R T+CISSQA
Sbjct 67 SARGTVGEALLPELMSPIRHIATDSGTTRKTLWRLHDGTLLESVLMRYTDRATLCISSQA 126
Query 125 GCGMACPFCATGQGGLTRNLSTAEILEQVRAGAAALRDDFGD------RLSNVVFMGMG 177
GCGMACPFCATGQGGL RNLSTAEI++QVR+ A A++D GD RLSNVVFMGMG
Sbjct 127 GCGMACPFCATGQGGLDRNLSTAEIVDQVRSAAKAMQD--GDVAGGPGRLSNVVFMGMG 183
Lambda K H
0.323 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 432410969436
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40