BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2882c
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610019|ref|NP_217398.1| ribosome recycling factor [Mycobact... 372 2e-101
gi|121638763|ref|YP_978987.1| ribosome recycling factor [Mycobac... 368 2e-100
gi|41409043|ref|NP_961879.1| ribosome recycling factor [Mycobact... 356 1e-96
gi|254819038|ref|ZP_05224039.1| ribosome recycling factor [Mycob... 353 9e-96
gi|240171728|ref|ZP_04750387.1| ribosome recycling factor [Mycob... 352 1e-95
gi|342858272|ref|ZP_08714927.1| ribosome recycling factor [Mycob... 351 3e-95
gi|183981840|ref|YP_001850131.1| ribosome recycling factor Frr [... 346 1e-93
gi|118617645|ref|YP_905977.1| ribosome recycling factor [Mycobac... 344 3e-93
gi|296171523|ref|ZP_06852787.1| ribosome recycling factor [Mycob... 343 4e-93
gi|15827834|ref|NP_302097.1| ribosome recycling factor [Mycobact... 340 4e-92
gi|333991239|ref|YP_004523853.1| ribosome recycling factor Frr [... 340 4e-92
gi|108798972|ref|YP_639169.1| ribosome recycling factor [Mycobac... 332 2e-89
gi|145224703|ref|YP_001135381.1| ribosome recycling factor [Myco... 327 4e-88
gi|118472629|ref|YP_886878.1| ribosome recycling factor [Mycobac... 327 4e-88
gi|226366024|ref|YP_002783807.1| ribosome recycling factor [Rhod... 323 6e-87
gi|120403212|ref|YP_953041.1| ribosome recycling factor [Mycobac... 323 8e-87
gi|111023540|ref|YP_706512.1| ribosome recycling factor [Rhodoco... 322 1e-86
gi|169630269|ref|YP_001703918.1| ribosome recycling factor [Myco... 319 9e-86
gi|226306032|ref|YP_002765992.1| ribosome recycling factor [Rhod... 313 5e-84
gi|333919252|ref|YP_004492833.1| ribosome-recycling factor [Amyc... 312 1e-83
gi|325673456|ref|ZP_08153147.1| ribosome recycling factor [Rhodo... 311 4e-83
gi|54026099|ref|YP_120341.1| ribosome recycling factor [Nocardia... 310 8e-83
gi|312139239|ref|YP_004006575.1| ribosome recycling factor [Rhod... 308 2e-82
gi|262202045|ref|YP_003273253.1| ribosome recycling factor [Gord... 303 5e-81
gi|343926730|ref|ZP_08766227.1| ribosome-recycling factor [Gordo... 295 2e-78
gi|296139389|ref|YP_003646632.1| ribosome recycling factor [Tsuk... 293 6e-78
gi|331698487|ref|YP_004334726.1| ribosome-recycling factor [Pseu... 291 2e-77
gi|326382902|ref|ZP_08204592.1| ribosome recycling factor [Gordo... 277 5e-73
gi|134102473|ref|YP_001108134.1| ribosome recycling factor [Sacc... 275 3e-72
gi|302525191|ref|ZP_07277533.1| ribosome recycling factor [Strep... 274 4e-72
gi|258653276|ref|YP_003202432.1| ribosome recycling factor [Naka... 273 9e-72
gi|257055044|ref|YP_003132876.1| ribosome recycling factor [Sacc... 272 2e-71
gi|325001877|ref|ZP_08122989.1| ribosome recycling factor [Pseud... 270 5e-71
gi|340525290|gb|AEK40495.1| ribosome recycling factor [Amycolato... 266 1e-69
gi|300783895|ref|YP_003764186.1| ribosome recycling factor [Amyc... 263 7e-69
gi|319948055|ref|ZP_08022229.1| ribosome recycling factor [Dietz... 261 3e-68
gi|237785749|ref|YP_002906454.1| ribosome recycling factor [Cory... 259 1e-67
gi|284992372|ref|YP_003410926.1| ribosome recycling factor [Geod... 259 2e-67
gi|256379903|ref|YP_003103563.1| ribosome recycling factor [Acti... 255 2e-66
gi|68536249|ref|YP_250954.1| ribosome recycling factor [Coryneba... 254 3e-66
gi|172040501|ref|YP_001800215.1| ribosome recycling factor [Cory... 253 7e-66
gi|117928746|ref|YP_873297.1| ribosome recycling factor [Acidoth... 251 3e-65
gi|296395044|ref|YP_003659928.1| ribosome recycling factor [Segn... 249 1e-64
gi|340794662|ref|YP_004760125.1| ribosome-recycling factor [Cory... 249 1e-64
gi|302554446|ref|ZP_07306788.1| ribosome recycling factor [Strep... 249 1e-64
gi|336325817|ref|YP_004605783.1| ribosome recycling factor [Cory... 249 2e-64
gi|311898628|dbj|BAJ31036.1| putative ribosome recycling factor ... 248 2e-64
gi|38234084|ref|NP_939851.1| ribosome recycling factor [Coryneba... 248 3e-64
gi|25028466|ref|NP_738520.1| ribosome recycling factor [Coryneba... 248 4e-64
gi|317508973|ref|ZP_07966606.1| ribosome recycling protein [Segn... 248 4e-64
>gi|15610019|ref|NP_217398.1| ribosome recycling factor [Mycobacterium tuberculosis H37Rv]
gi|15842423|ref|NP_337460.1| ribosome recycling factor [Mycobacterium tuberculosis CDC1551]
gi|31794058|ref|NP_856551.1| ribosome recycling factor [Mycobacterium bovis AF2122/97]
81 more sequence titles
Length=185
Score = 372 bits (954), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK
Sbjct 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG
Sbjct 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|121638763|ref|YP_978987.1| ribosome recycling factor [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991255|ref|YP_002645944.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo
172]
gi|166230800|sp|A1KMM6.1|RRF_MYCBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809522|sp|C1AFZ7.1|RRF_MYCBT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|121494411|emb|CAL72892.1| Ribosome recycling factor frr [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774370|dbj|BAH27176.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602801|emb|CCC65479.1| Ribosome recycling factor frr [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=185
Score = 368 bits (944), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 184/185 (99%), Positives = 184/185 (99%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAAT ITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATLITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK
Sbjct 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG
Sbjct 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|41409043|ref|NP_961879.1| ribosome recycling factor [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118463206|ref|YP_882906.1| ribosome recycling factor [Mycobacterium avium 104]
gi|254776160|ref|ZP_05217676.1| ribosome recycling factor [Mycobacterium avium subsp. avium ATCC
25291]
gi|47116995|sp|P61307.1|RRF_MYCPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|166230799|sp|A0QJ18.1|RRF_MYCA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|41397402|gb|AAS05262.1| Frr [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164493|gb|ABK65390.1| ribosome recycling factor [Mycobacterium avium 104]
gi|336459068|gb|EGO38018.1| ribosome recycling factor [Mycobacterium avium subsp. paratuberculosis
S397]
Length=185
Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/185 (96%), Positives = 181/185 (98%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRI IDYYGAATPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+Q+ AIETAIRNSDLGVNPTNDG LIRVAVPQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEKDLDKTTHQY+TQIDELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYITQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|254819038|ref|ZP_05224039.1| ribosome recycling factor [Mycobacterium intracellulare ATCC
13950]
Length=185
Score = 353 bits (905), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 175/185 (95%), Positives = 180/185 (98%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRI IDYYGAATPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+Q+ AIETAIRNSDLGVNPTNDG LIRVAVPQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEKDLDKTTHQY TQI+ELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYTTQIEELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|240171728|ref|ZP_04750387.1| ribosome recycling factor [Mycobacterium kansasii ATCC 12478]
Length=185
Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/185 (94%), Positives = 178/185 (97%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ALFDAEEKMEKAV+VARDDLSTIRTGRANPGMFSRI IDYYG TPITQLASINVP
Sbjct 1 MIDDALFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGTNTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEANQL AIETAIRNSDLGVNPTNDG LIRVA+PQLTEERRRELVKQAKHK
Sbjct 61 EARLVVIKPYEANQLHAIETAIRNSDLGVNPTNDGTLIRVAIPQLTEERRRELVKQAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEA+VSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEKDLDKTTH YV QIDELVKHKEG
Sbjct 121 GEEARVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHHYVAQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|342858272|ref|ZP_08714927.1| ribosome recycling factor [Mycobacterium colombiense CECT 3035]
gi|342133976|gb|EGT87156.1| ribosome recycling factor [Mycobacterium colombiense CECT 3035]
Length=185
Score = 351 bits (901), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/185 (95%), Positives = 179/185 (97%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRI IDYYG ATPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGTATPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+Q+ AIETAIRNSDLGVNPTNDG LIRVAVPQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEKDLDKTTHQY TQI+ELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYTTQIEELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|183981840|ref|YP_001850131.1| ribosome recycling factor Frr [Mycobacterium marinum M]
gi|238689247|sp|B2HJP0.1|RRF_MYCMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|183175166|gb|ACC40276.1| ribosome recycling factor Frr [Mycobacterium marinum M]
Length=185
Score = 346 bits (887), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/185 (91%), Positives = 178/185 (97%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VAR+D++TIRTGRANPGMFSRI IDYYG TPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYEANQL AIETAIRNSDLGVNPTNDG +IRVAVPQLTEERRR+LVKQAKHK
Sbjct 61 EARMVVIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEA+VSVRNIRRKAMEELHRIRK+GEAGEDEV RAEKDLDK+THQYV QIDELVKHKEG
Sbjct 121 GEEARVSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|118617645|ref|YP_905977.1| ribosome recycling factor [Mycobacterium ulcerans Agy99]
gi|166230805|sp|A0PQ87.1|RRF_MYCUA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|118569755|gb|ABL04506.1| ribosome recycling factor Frr [Mycobacterium ulcerans Agy99]
Length=185
Score = 344 bits (883), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/185 (91%), Positives = 178/185 (97%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VAR+D++TIRTGRANPGMFSRI IDYYG TPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYEANQL AIETAIRNSDLGVNPTNDG +IRVAVPQLTEERRR+LVKQAKHK
Sbjct 61 EARMVVIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEA+VSVRNIRRKAMEELHRIRK+GEAGEDEV RAEKDLDK+THQYV QIDELVKHKEG
Sbjct 121 GEEARVSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEG 180
Query 181 ELLEV 185
+LLEV
Sbjct 181 DLLEV 185
>gi|296171523|ref|ZP_06852787.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894085|gb|EFG73846.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=185
Score = 343 bits (881), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 170/185 (92%), Positives = 176/185 (96%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VARDDLSTIRTGRANPGMFSRI IDYYGA TPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGATTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+QL AIE AIRNSDLGVNPTNDG LIRVAVPQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYEASQLGAIENAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+VSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEK+LDK THQY QIDELVKHKEG
Sbjct 121 GEDARVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKELDKATHQYTAQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|15827834|ref|NP_302097.1| ribosome recycling factor [Mycobacterium leprae TN]
gi|221230311|ref|YP_002503727.1| ribosome recycling factor [Mycobacterium leprae Br4923]
gi|3122778|sp|O33046.1|RRF_MYCLE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|254809523|sp|B8ZRV0.1|RRF_MYCLB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|2251188|emb|CAB10670.1| ribosome recycling factor [Mycobacterium leprae]
gi|13093386|emb|CAC30541.1| ribosome recycling factor [Mycobacterium leprae]
gi|219933418|emb|CAR71685.1| ribosome recycling factor [Mycobacterium leprae Br4923]
Length=185
Score = 340 bits (873), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/185 (91%), Positives = 176/185 (96%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VAR+DLS IRTGRANPGMFSR+ IDYYG+ATPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVSVAREDLSMIRTGRANPGMFSRLVIDYYGSATPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPY+A QL AIETAIRNSDLGVNP+NDG LIRVAVPQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYDAIQLHAIETAIRNSDLGVNPSNDGTLIRVAVPQLTEERRRELVKQAKCK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRK MEELHRIRK+GEAGEDEV RAEKDLDKTTHQYV QIDELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKVMEELHRIRKDGEAGEDEVSRAEKDLDKTTHQYVIQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|333991239|ref|YP_004523853.1| ribosome recycling factor Frr [Mycobacterium sp. JDM601]
gi|333487207|gb|AEF36599.1| ribosome recycling factor Frr [Mycobacterium sp. JDM601]
Length=185
Score = 340 bits (873), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/185 (90%), Positives = 179/185 (97%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAVAVAR+DL+T+RTGRANPGMFSRI IDYYG+ TPITQL SINVP
Sbjct 1 MIDEALFDAEEKMEKAVAVAREDLATVRTGRANPGMFSRIVIDYYGSPTPITQLCSINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+QL AIETAIRNSDLG+NP+NDG+LIRVAVPQLTEERR+ELVKQAK K
Sbjct 61 EARLVVIKPYEASQLGAIETAIRNSDLGLNPSNDGSLIRVAVPQLTEERRKELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEELHRIRK+GEAGEDEVGRAEKDLD++T QYV+QIDELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDRSTQQYVSQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|108798972|ref|YP_639169.1| ribosome recycling factor [Mycobacterium sp. MCS]
gi|119868087|ref|YP_938039.1| ribosome recycling factor [Mycobacterium sp. KMS]
gi|126434572|ref|YP_001070263.1| ribosome recycling factor [Mycobacterium sp. JLS]
6 more sequence titles
Length=185
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/185 (88%), Positives = 173/185 (94%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+VARDDLS+IRTGRANPGMFSRI +DYYGA TPITQL+SINVP
Sbjct 1 MIDETLFDAEEKMEKAVSVARDDLSSIRTGRANPGMFSRINVDYYGATTPITQLSSINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYEANQLR IE AIRNSDLGVNPTNDG +IRV++PQLTEERRR+LVKQAK K
Sbjct 61 EARMVVIKPYEANQLRNIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKAK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEEL RI+K+GEAGEDEV RAEKDLDKTTH Y QIDELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELARIKKDGEAGEDEVSRAEKDLDKTTHTYTHQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|145224703|ref|YP_001135381.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
gi|315445033|ref|YP_004077912.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
gi|189044062|sp|A4TC77.1|RRF_MYCGI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|145217189|gb|ABP46593.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
gi|315263336|gb|ADU00078.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
Length=185
Score = 327 bits (839), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/185 (84%), Positives = 176/185 (96%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+VARDDL++IRTGRANPGMF+RI IDYYGA+TPITQL+SINVP
Sbjct 1 MIDETLFDAEEKMEKAVSVARDDLASIRTGRANPGMFNRIHIDYYGASTPITQLSSINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYEANQLR IE AIRNSDLGVNPTNDG +IRV++PQLTEERRR+LVKQAK K
Sbjct 61 EARMVVIKPYEANQLRPIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVS+RNIRRKAMEEL RI+K+G+AGED+V RAEKDLDK+THQY +Q+D+LVKHKEG
Sbjct 121 GEDAKVSIRNIRRKAMEELARIKKDGDAGEDDVTRAEKDLDKSTHQYTSQVDDLVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|118472629|ref|YP_886878.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
gi|166230801|sp|A0QVE0.1|RRF_MYCS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|118173916|gb|ABK74812.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
Length=185
Score = 327 bits (838), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/185 (86%), Positives = 172/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+VARD+L +IRTGRANPGMF+RI IDYYG+ TPITQLASINVP
Sbjct 1 MIDETLFDAEEKMEKAVSVARDELGSIRTGRANPGMFNRINIDYYGSMTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEA+QLRAIE AIRNSDLGVNP+NDG +IRVA+PQLTEERRRELVKQAK K
Sbjct 61 EARLVVIKPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEEL RI+K+GEAGEDEV RAEKDLDK+TH Y QIDELVKHKE
Sbjct 121 GEDAKVSVRNIRRKAMEELSRIKKDGEAGEDEVSRAEKDLDKSTHTYTAQIDELVKHKES 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|226366024|ref|YP_002783807.1| ribosome recycling factor [Rhodococcus opacus B4]
gi|254809526|sp|C1B2U5.1|RRF_RHOOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226244514|dbj|BAH54862.1| ribosome recycling factor [Rhodococcus opacus B4]
Length=185
Score = 323 bits (828), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/185 (85%), Positives = 174/185 (95%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALF+AEEKMEKAV VA+DDL +IRTGRANPGMF+RI IDYYGA TPITQLASINVP
Sbjct 1 MIDEALFEAEEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVV+KPYEA+QL AIETAIRNSDLGVNP+NDG LIR++VPQLTEERRRELVKQAK K
Sbjct 61 EARLVVVKPYEASQLNAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRN+RRKAM+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV Q+DELVKHKE
Sbjct 121 GEDAKVSVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|120403212|ref|YP_953041.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
gi|166230806|sp|A1T785.1|RRF_MYCVP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|119956030|gb|ABM13035.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
Length=185
Score = 323 bits (827), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/185 (85%), Positives = 173/185 (94%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAVAVARDDL++IRTGRANPGMF+RI +DYYGA TPITQL+SINVP
Sbjct 1 MIDETLFDAEEKMEKAVAVARDDLASIRTGRANPGMFNRIHVDYYGAVTPITQLSSINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYEA+QLR IE AIRNSDLGVNPTNDG +IRV++PQLTEERRR+LVKQAK K
Sbjct 61 EARMVVIKPYEASQLRPIEDAIRNSDLGVNPTNDGNVIRVSIPQLTEERRRDLVKQAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRNIRRKAMEEL RI+K+G+AGED+V RAEKDLDKTT QY QIDELVKHKEG
Sbjct 121 GEDAKVSVRNIRRKAMEELTRIKKDGDAGEDDVARAEKDLDKTTQQYTHQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|111023540|ref|YP_706512.1| ribosome recycling factor [Rhodococcus jostii RHA1]
gi|122955102|sp|Q0S282.1|RRF_RHOSR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|110823070|gb|ABG98354.1| ribosome recycling factor [Rhodococcus jostii RHA1]
Length=185
Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/185 (85%), Positives = 174/185 (95%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALF+AEEKMEKAV VA+DDL +IRTGRANPGMF+RI IDYYGA TPITQLASINVP
Sbjct 1 MIDEALFEAEEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVV+KPYEA+QL AIETAIRNSDLGVNP+NDG LIR++VPQLTEERRRELVKQAK K
Sbjct 61 EARLVVVKPYEASQLGAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVRN+RRKAM+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV Q+DELVKHKE
Sbjct 121 GEDAKVSVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|169630269|ref|YP_001703918.1| ribosome recycling factor [Mycobacterium abscessus ATCC 19977]
gi|238688906|sp|B1MDE3.1|RRF_MYCA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|169242236|emb|CAM63264.1| Ribosome recycling factor (Ribosome-releasing factor [Mycobacterium
abscessus]
Length=185
Score = 319 bits (818), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/185 (83%), Positives = 172/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L DAEEKMEKAV VARDD +TIRTGRANPGMF R+ IDYYG TPITQ+A INVP
Sbjct 1 MIDEVLLDAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+VVIKPYE+NQL+AIE AIRNSDLG+NP+NDG++IRVA+PQLTEERRRELVKQAK K
Sbjct 61 EARMVVIKPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RNIRRKA +EL+RI+K+GEAGEDEVGRAEKDLDKTT QYV+QIDELVKHKEG
Sbjct 121 GEDAKVTLRNIRRKANDELNRIKKDGEAGEDEVGRAEKDLDKTTAQYVSQIDELVKHKEG 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|226306032|ref|YP_002765992.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
gi|229491439|ref|ZP_04385263.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
gi|259494552|sp|C0ZY18.1|RRF_RHOE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|226185149|dbj|BAH33253.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
gi|229321724|gb|EEN87521.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
Length=185
Score = 313 bits (803), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 174/185 (95%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALF+AEEKMEKAV VA+DDL ++RTGRANPGMFSRI IDYYG+ TPITQLASINVP
Sbjct 1 MIDEALFEAEEKMEKAVTVAKDDLGSVRTGRANPGMFSRIVIDYYGSITPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+V++KPYEA+QL AIETAIRNSDLGVNP+NDG++IR++VPQLTEERRRELVKQAK K
Sbjct 61 EARMVIVKPYEASQLNAIETAIRNSDLGVNPSNDGSIIRISVPQLTEERRRELVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE++KV++RNIRRKAM+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV ++ELVKHKE
Sbjct 121 GEDSKVTLRNIRRKAMDELGRIQKDGEAGEDEVGRAEKELDKTTAKYVHTVEELVKHKEA 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|333919252|ref|YP_004492833.1| ribosome-recycling factor [Amycolicicoccus subflavus DQS3-9A1]
gi|333481473|gb|AEF40033.1| Ribosome-recycling factor [Amycolicicoccus subflavus DQS3-9A1]
Length=185
Score = 312 bits (799), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/185 (81%), Positives = 171/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VA+D+L +IRTGRANPGMFSRI IDYYGA TPITQLASINVP
Sbjct 1 MIDEALFDAEEKMEKAVSVAKDELGSIRTGRANPGMFSRIVIDYYGAPTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPY+ +QL AIETAIRNSDLGVNP NDGA+IR+AVPQLTEERRR+L KQA+ K
Sbjct 61 EARLVVIKPYDTSQLSAIETAIRNSDLGVNPGNDGAIIRIAVPQLTEERRRDLAKQARSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+V+VRN+RRKAM+EL RI+K+GEAGEDEVGRAEK++DK T +Y Q+DELVKHKE
Sbjct 121 GEDARVAVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKEIDKLTAKYSAQVDELVKHKES 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|325673456|ref|ZP_08153147.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
gi|325555477|gb|EGD25148.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
Length=185
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 144/185 (78%), Positives = 172/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALF+AEEKMEKA+ VA+DDL +IRTGRANPGMF+R+ ++YYG+ TPITQLASINVP
Sbjct 1 MIDEALFEAEEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+V+IKPYEA+QL IE AIRNSDLGVNP+NDG++IR++VPQLTEERRRE VKQAK K
Sbjct 61 EARMVIIKPYEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RRK M+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV+QIDELVKHKE
Sbjct 121 GEDAKVAIRNVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEA 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|54026099|ref|YP_120341.1| ribosome recycling factor [Nocardia farcinica IFM 10152]
gi|60390236|sp|Q5YS64.1|RRF_NOCFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|54017607|dbj|BAD58977.1| putative ribosome recycling factor [Nocardia farcinica IFM 10152]
Length=185
Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 146/185 (79%), Positives = 172/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MI+EALFDAEEKMEKAV+VA+DDL TIRTGRANPGMF+R+ +DYYG+ TP+TQ++SI VP
Sbjct 1 MIEEALFDAEEKMEKAVSVAKDDLGTIRTGRANPGMFARVVVDYYGSPTPVTQMSSITVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+VVIKPYEA QL AIETAIRNSDLGVNPTN+G ++R+ +PQLTEERRRELVKQAK K
Sbjct 61 EPRMVVIKPYEAGQLGAIETAIRNSDLGVNPTNNGDILRITIPQLTEERRRELVKQAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RRKAM+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV+QIDELVKHKE
Sbjct 121 GEDAKVAIRNVRRKAMDELARIQKDGEAGEDEVGRAEKELDKTTAKYVSQIDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|312139239|ref|YP_004006575.1| ribosome recycling factor [Rhodococcus equi 103S]
gi|311888578|emb|CBH47890.1| ribosome recycling factor [Rhodococcus equi 103S]
Length=185
Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/185 (78%), Positives = 171/185 (93%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALF+AEEKMEKA+ VA+DDL +IRTGRANPGMF+R+ ++YYG+ TPITQLASINVP
Sbjct 1 MIDEALFEAEEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+V+IKPYEA+QL IE AIRNSDLGVNP+NDG++IR++VPQLTEERRRE VKQAK K
Sbjct 61 EPRMVIIKPYEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RRK M+EL RI+K+GEAGEDEVGRAEK+LDKTT +YV+QIDELVKHKE
Sbjct 121 GEDAKVAIRNVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEA 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|262202045|ref|YP_003273253.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
gi|262085392|gb|ACY21360.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
Length=185
Score = 303 bits (777), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/185 (80%), Positives = 169/185 (92%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ALFDAEEKMEKAV+VA+DD+ +IRTGRANP MF+++ I+YYGA TP+TQ+ASIN P
Sbjct 1 MIDDALFDAEEKMEKAVSVAKDDMGSIRTGRANPAMFNKVVIEYYGAMTPVTQVASINTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E RLVVIKPYEA+ LR IETAIRNSDLGVNPTNDG +IRVAVPQLTEERRR+LVKQAK K
Sbjct 61 EPRLVVIKPYEASTLRDIETAIRNSDLGVNPTNDGNVIRVAVPQLTEERRRDLVKQAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVS+RNIRRKA++EL RI+K+GEAGEDEV RAEK+LDKTT YV Q+DELVKHKE
Sbjct 121 GEDAKVSIRNIRRKAVDELKRIQKDGEAGEDEVTRAEKELDKTTAGYVQQVDELVKHKEN 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|343926730|ref|ZP_08766227.1| ribosome-recycling factor [Gordonia alkanivorans NBRC 16433]
gi|343763329|dbj|GAA13153.1| ribosome-recycling factor [Gordonia alkanivorans NBRC 16433]
Length=185
Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/185 (78%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+AL DAEEKMEKAV VA++D+ +IRTGRANP MF+RI I+YYG+ TP+TQ+ASIN P
Sbjct 1 MIDDALLDAEEKMEKAVNVAKEDMGSIRTGRANPAMFNRINIEYYGSMTPVTQVASINTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E RLVVIKPYEA+ LR IETAIRNSDLGVNPTNDG +IRVA+PQLTEERRR+LVKQAK K
Sbjct 61 EPRLVVIKPYEASTLRDIETAIRNSDLGVNPTNDGTIIRVAIPQLTEERRRDLVKQAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RRKA +EL RI+K+GEAGEDEV RAEK+LDKTT YV Q+DELVKHKE
Sbjct 121 GEDAKVAIRNVRRKAADELKRIQKDGEAGEDEVTRAEKELDKTTATYVHQVDELVKHKED 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|296139389|ref|YP_003646632.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
gi|296027523|gb|ADG78293.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
Length=185
Score = 293 bits (751), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/185 (75%), Positives = 162/185 (88%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEALFDAEEKMEKAV+VAR+D +IRTGRANP MF+++ +DYYG+ TPITQ++SI P
Sbjct 1 MIDEALFDAEEKMEKAVSVAREDFQSIRTGRANPSMFAKVMVDYYGSPTPITQISSITTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPYEANQL IETAIRNSDLGVNPTNDG LIRV +PQLTEERR+ELVKQ K K
Sbjct 61 EARLVVIKPYEANQLGNIETAIRNSDLGVNPTNDGQLIRVGIPQLTEERRKELVKQVKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVS+RN+RRKA E++ + K+G+AGEDE RAEKDLDKTT +Y QID+LVKHKE
Sbjct 121 GEDAKVSIRNVRRKANEQIAKFVKDGDAGEDEGSRAEKDLDKTTAKYTAQIDDLVKHKEA 180
Query 181 ELLEV 185
+L+EV
Sbjct 181 DLMEV 185
>gi|331698487|ref|YP_004334726.1| ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
gi|326953176|gb|AEA26873.1| Ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
Length=185
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/185 (74%), Positives = 166/185 (90%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+VA+DDL+++RTGRA P MFSRI +DYYGA TP+ QLAS++VP
Sbjct 1 MIDETLFDAEEKMEKAVSVAKDDLASVRTGRATPSMFSRIMVDYYGAMTPLNQLASVSVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ V+KPY+A+Q+ A+E AIRNSDLGVNPTNDG +IRV +PQL+EERR+E+VK A+ K
Sbjct 61 EARMAVVKPYDASQIGALEKAIRNSDLGVNPTNDGQIIRVVIPQLSEERRKEMVKVARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+V++R++RRKAMEELHRI KEGEAGEDEVGRAEK+L TT +YV Q+DELVKHKE
Sbjct 121 GEDARVTIRSLRRKAMEELHRIVKEGEAGEDEVGRAEKELQGTTDKYVHQVDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|326382902|ref|ZP_08204592.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
gi|326198492|gb|EGD55676.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
Length=185
Score = 277 bits (709), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/185 (73%), Positives = 160/185 (87%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDEAL DAEEKMEKAVA RDD+++IRTGRANP MF+++ I+YYGA TPITQ+A IN P
Sbjct 1 MIDEALLDAEEKMEKAVAHLRDDMASIRTGRANPAMFNKVVIEYYGAMTPITQVAGINTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E RLVVIKPYE + + IETAIRNSDLGVNPTNDG +IRVAVPQLTEERR++L KQA+ K
Sbjct 61 EPRLVVIKPYEQSTMNDIETAIRNSDLGVNPTNDGTVIRVAVPQLTEERRKQLGKQARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RRKA++EL RI+K+G+AGEDEV RAEK+LD TT Y +DELVK+KE
Sbjct 121 GEDAKVAIRNVRRKAVDELKRIQKDGDAGEDEVTRAEKELDTTTRTYTDAVDELVKNKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|134102473|ref|YP_001108134.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
gi|291004136|ref|ZP_06562109.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
gi|166231222|sp|A4FMD4.1|RRF_SACEN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|133915096|emb|CAM05209.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
Length=185
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/185 (71%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L + EEKM+KAV VA+D+L+T+RTGRANP MFS I +DYYG+ TP+ QLASI+VP
Sbjct 1 MIDETLLEGEEKMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EARLVVIKPY+A+QL A+E AIR+SDLGVNP+NDG LIRV++PQ+TEERR+E+VK AKHK
Sbjct 61 EARLVVIKPYDASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEE +++VR IRRK EE+ RI K+GEAGEDE R EK+L+ TH+YV QIDELVKHKE
Sbjct 121 GEEGRITVRGIRRKVKEEIDRIVKDGEAGEDEGTRGEKELENLTHRYVAQIDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|302525191|ref|ZP_07277533.1| ribosome recycling factor [Streptomyces sp. AA4]
gi|302434086|gb|EFL05902.1| ribosome recycling factor [Streptomyces sp. AA4]
Length=185
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/185 (71%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L DAEEKMEKAV+VA++DL+++RTGRA+P MFSRI ++YYGA TP+ QLAS+NVP
Sbjct 1 MIDETLLDAEEKMEKAVSVAKEDLTSVRTGRAHPSMFSRIVVEYYGAPTPLNQLASVNVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ +IKPY+ QL AIE AIR SDLGVNP+NDG +IR+ +PQLTEERR+E+VK AK K
Sbjct 61 EARMALIKPYDQTQLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+VS+R+IRRKA EEL RI K+GEAGEDEV RAEK+L T YV Q+DELVKHKE
Sbjct 121 GEDARVSIRSIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDTYVHQVDELVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|258653276|ref|YP_003202432.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
gi|258556501|gb|ACV79443.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
Length=185
Score = 273 bits (698), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/185 (70%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+VA+DDL+T+RTGRANP MF RI +DYYGA TPITQ+A+IN+P
Sbjct 1 MIDEELFDAEEKMEKAVSVAKDDLATLRTGRANPNMFGRIQVDYYGAPTPITQMAAINIP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ VIKPY+++QL A+E AIR+SDLGVNPT DG +IRV PQLTE+RRREL K A+ K
Sbjct 61 EARMAVIKPYDSSQLHAVEKAIRDSDLGVNPTTDGIVIRVVFPQLTEQRRRELGKTARSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVS+RNIRRK + L ++ K+GE GED+V RAEK+L + T +Y +Q+DE+VKHKE
Sbjct 121 GEDAKVSIRNIRRKCTQVLDKLVKDGEVGEDDVTRAEKELQQITDRYTSQVDEMVKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|257055044|ref|YP_003132876.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
gi|256584916|gb|ACU96049.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
Length=185
Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/185 (70%), Positives = 158/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFDAEEKMEKAV+ A+++L+++RTGRA P MFSRI ++YYGA TP+ QLAS+N+P
Sbjct 1 MIDETLFDAEEKMEKAVSFAKEELASVRTGRATPAMFSRIVVEYYGAPTPLNQLASVNIP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ +IKPY+ +QL IE AIR SDLGVNPTNDG++IRV +PQLTEERR+E+VK AK K
Sbjct 61 EARMAIIKPYDGSQLANIEKAIRESDLGVNPTNDGSIIRVVIPQLTEERRKEMVKIAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GEEA++S+R IRRKA EEL RI K+GEAGEDEV RAEK+L T +YV Q+DELVK+KE
Sbjct 121 GEEARISIRGIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDRYVHQVDELVKNKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|325001877|ref|ZP_08122989.1| ribosome recycling factor [Pseudonocardia sp. P1]
Length=185
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/185 (70%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MI+E LFD EEKMEKAV VARDDL+ +RTGRA P MFSRI +DYYGAATP+ QLAS+++P
Sbjct 1 MIEETLFDVEEKMEKAVGVARDDLTGVRTGRATPSMFSRIVVDYYGAATPLNQLASVSIP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ VIKPY+A+QL+A+E AI SDLGVNP+NDG +IRV +PQL+EERRR++VK A+ K
Sbjct 61 EARMAVIKPYDASQLKAMEKAIAESDLGVNPSNDGQIIRVIIPQLSEERRRDMVKVARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+V +R +RRKAM+ELHRI+++GEAGEDEV R EK+L T +YV QIDELVK+KE
Sbjct 121 GEDARVVMRGLRRKAMDELHRIQRDGEAGEDEVVRGEKELQVLTDRYVAQIDELVKNKES 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|340525290|gb|AEK40495.1| ribosome recycling factor [Amycolatopsis mediterranei S699]
Length=185
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/185 (68%), Positives = 157/185 (85%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L DAEEKMEKAV+VA+D+L ++RTGRA+ MFSRI ++YYG+ TP+ QLAS+NVP
Sbjct 1 MIDETLLDAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ +IKPY+ +QL AIE AIR SDLGVNP+NDG +IR+ +PQLTEERR+E+VK AK K
Sbjct 61 EARMALIKPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+VS+R+IRRKA +EL RI K+GEAGED+V RAEK+L T YV ++DEL+KHKE
Sbjct 121 GEDARVSIRSIRRKAKDELDRIAKDGEAGEDDVARAEKELQNLTDTYVHKVDELIKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|300783895|ref|YP_003764186.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
gi|299793409|gb|ADJ43784.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
Length=187
Score = 263 bits (673), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/185 (68%), Positives = 157/185 (85%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
+IDE L DAEEKMEKAV+VA+D+L ++RTGRA+ MFSRI ++YYG+ TP+ QLAS+NVP
Sbjct 3 VIDETLLDAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVP 62
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ +IKPY+ +QL AIE AIR SDLGVNP+NDG +IR+ +PQLTEERR+E+VK AK K
Sbjct 63 EARMALIKPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGK 122
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A+VS+R+IRRKA +EL RI K+GEAGED+V RAEK+L T YV ++DEL+KHKE
Sbjct 123 GEDARVSIRSIRRKAKDELDRIAKDGEAGEDDVARAEKELQNLTDTYVHKVDELIKHKEA 182
Query 181 ELLEV 185
ELLEV
Sbjct 183 ELLEV 187
>gi|319948055|ref|ZP_08022229.1| ribosome recycling factor [Dietzia cinnamea P4]
gi|319438294|gb|EFV93240.1| ribosome recycling factor [Dietzia cinnamea P4]
Length=185
Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/185 (67%), Positives = 156/185 (85%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L +AEEKME+A+ RD+L++IRTGRANPGMF+R+ +YYG TPITQ++SI VP
Sbjct 1 MIDDTLLEAEEKMERALEHVRDELASIRTGRANPGMFNRVLCEYYGTLTPITQMSSITVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYE +Q+ IE AIRNSDLGVNPTNDG ++RV VPQLTEERRR+LVKQAK K
Sbjct 61 EPRMLIIKPYEMSQIGPIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKQAKAK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
E+ +++VR +RRKAM+EL RI+K+GEAGEDEV AEK+LDK T +YV +D+LVK KEG
Sbjct 121 AEDGRIAVRGVRRKAMDELKRIQKDGEAGEDEVTAAEKELDKLTQRYVADVDDLVKVKEG 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|237785749|ref|YP_002906454.1| ribosome recycling factor [Corynebacterium kroppenstedtii DSM
44385]
gi|259494536|sp|C4LJA6.1|RRF_CORK4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|237758661|gb|ACR17911.1| Ribosome recycling factor [Corynebacterium kroppenstedtii DSM
44385]
Length=185
Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/185 (65%), Positives = 159/185 (86%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L ++EE+M ++V AR+DL+TIRTGRANP MF+ + +YYG TPITQ+A+I+VP
Sbjct 1 MIDDTLLESEERMTQSVEYAREDLTTIRTGRANPSMFNGVQAEYYGVMTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYE + + AIE AIRNSDLGVNPTNDG ++RV VPQLTEERR+E+V+ AK K
Sbjct 61 EPRMLLIKPYEPSIMNAIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVRLAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+A++++RNIRRK M+EL RI+K+GEAGEDEV AEK+LDKTTH+YV+Q+D+L++ KE
Sbjct 121 GEDARIAIRNIRRKGMDELKRIQKDGEAGEDEVQAAEKELDKTTHEYVSQVDKLIEAKEK 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|284992372|ref|YP_003410926.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
gi|284065617|gb|ADB76555.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
Length=185
Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/185 (68%), Positives = 155/185 (84%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L DAEE+M+KA++VAR+DL ++RTGRA P MF++I +DYYGA TP+ Q++SI VP
Sbjct 1 MIDDTLLDAEERMDKALSVAREDLGSVRTGRAAPSMFNKILVDYYGAPTPVPQMSSITVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+ VIKPY+ QL AIE AIR+SDLGVNPTNDG +IRV PQLTEERRR+LVKQA+ K
Sbjct 61 EARMAVIKPYDTGQLSAIEKAIRDSDLGVNPTNDGQIIRVVFPQLTEERRRDLVKQARAK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKV++RN+RR+A EEL RI K+GEAGED+V RAEK+LD T ++ IDE VK+KE
Sbjct 121 GEDAKVAIRNVRRRAKEELDRIAKDGEAGEDDVRRAEKELDDLTAKHTHGIDEAVKNKEN 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|256379903|ref|YP_003103563.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
gi|255924206|gb|ACU39717.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
Length=185
Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/185 (66%), Positives = 151/185 (82%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L +AEEKMEKAV V+++DL+T+RTGRA P MFSRI +YYG+ TPI QLASI VP
Sbjct 1 MIDETLLEAEEKMEKAVTVSKEDLATVRTGRATPAMFSRIVAEYYGSMTPINQLASIAVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+ V+KP++ + AIE AIR+SDLGVNP+NDG +IRV PQL+EERRRE+VK AK K
Sbjct 61 EPRMAVVKPFDKGSMTAIEKAIRDSDLGVNPSNDGTVIRVVFPQLSEERRREMVKVAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVS+RNIRRKA EEL R+ K+GE GED+ R EK+L+ TH+Y+ Q+DE +K+KE
Sbjct 121 GEDAKVSIRNIRRKAKEELDRLVKDGEVGEDDGARGEKELENVTHRYIAQVDEAMKNKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|68536249|ref|YP_250954.1| ribosome recycling factor [Corynebacterium jeikeium K411]
gi|260578949|ref|ZP_05846852.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
gi|123650872|sp|Q4JV21.1|RRF_CORJK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|68263848|emb|CAI37336.1| frr [Corynebacterium jeikeium K411]
gi|258602923|gb|EEW16197.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
Length=185
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/185 (65%), Positives = 154/185 (84%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L ++EE+M +V AR+DL+TIRTGRANP MF+ + +YYG TPITQ+A+I+VP
Sbjct 1 MIDDILLESEERMTSSVEHAREDLTTIRTGRANPSMFNGVVAEYYGVPTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYE + + AIE AIRNSDLGVNPTNDG ++RV +PQLTEERR+E+VK AK K
Sbjct 61 EPRMLLIKPYEQSTMDAIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKEMVKVAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AK+++RNIRRK ME+L +I+K+GEAGEDEV AEKDL+K TH YV Q+D LV+ KE
Sbjct 121 GEDAKIAIRNIRRKGMEQLGKIQKDGEAGEDEVRAAEKDLEKITHSYVEQVDSLVEAKEK 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|172040501|ref|YP_001800215.1| ribosome recycling factor [Corynebacterium urealyticum DSM 7109]
gi|238057837|sp|B1VG92.1|RRF_CORU7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|171851805|emb|CAQ04781.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length=185
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/185 (63%), Positives = 154/185 (84%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
M+DE L + EE+M +V AR+DL+TIRTGRANP MF+ + +YYG TPITQ+A+I+VP
Sbjct 1 MMDEILLECEERMTSSVEFAREDLTTIRTGRANPAMFNSVIAEYYGVPTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+++IKPYE +Q++ IE AIRNSDLGVNPTNDG ++RV +PQLTEERRRE+V+QAK K
Sbjct 61 EARMMLIKPYEQSQIQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRREMVRQAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AK+++RNIRR ME+L +I+K+G+AGEDEV +E +L+K T YV Q+DELV+ KE
Sbjct 121 GEDAKIAIRNIRRHGMEQLAKIQKDGDAGEDEVRASENELEKITSNYVKQVDELVERKEE 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|117928746|ref|YP_873297.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
gi|166230403|sp|A0LV51.1|RRF_ACIC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|117649209|gb|ABK53311.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
Length=185
Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/185 (64%), Positives = 153/185 (83%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L +AEEKMEKA VAR++ + IRTGRANP +FS+IT++YYG TP+ QLAS V
Sbjct 1 MIDDTLLEAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVA 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
+ARL+VI PY+ LRAIE AIR+SDLGVNPT+DG++IRVA+P LTEERRR+ +K A+H+
Sbjct 61 DARLIVIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHE 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
EEA+V++RNIRR A + L +++K+GE GED+V RAEK+LD+ TH+YV IDE++KHKE
Sbjct 121 AEEARVAIRNIRRHAKDALDKLQKDGEVGEDDVRRAEKELDELTHKYVAHIDEMLKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|296395044|ref|YP_003659928.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
gi|296182191|gb|ADG99097.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
Length=185
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/185 (64%), Positives = 150/185 (82%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LF+AEE+ME AV VA+DD + IRTGRA +F+++ +DYYG TPI Q++S+ P
Sbjct 1 MIDEILFEAEERMELAVEVAKDDFAAIRTGRATASLFAKVVVDYYGTPTPIPQISSVQTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
+ RLVVIKPYEA QLRAIE AI+ SDLG+NP+NDG ++RVA+P LTEERR+E KQA+ K
Sbjct 61 DPRLVVIKPYEAGQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
EEA+V+VRN+RRKA E+L ++ KEG+ GED+V RAEK+LDK T ++V IDELVK KE
Sbjct 121 AEEARVTVRNVRRKANEQLGKLSKEGQTGEDDVARAEKELDKLTARFVGVIDELVKKKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|340794662|ref|YP_004760125.1| ribosome-recycling factor [Corynebacterium variabile DSM 44702]
gi|340534572|gb|AEK37052.1| ribosome-recycling factor [Corynebacterium variabile DSM 44702]
Length=185
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/185 (63%), Positives = 152/185 (83%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L DAE+ M ++V R+DL+TIRTGRANP MF+R+ +YYG TPITQ+A+I+VP
Sbjct 1 MIDDTLLDAEDHMSRSVDHVREDLTTIRTGRANPAMFNRVFAEYYGMRTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYE + ++ IE AIRNSDLGVNPTNDG ++RV +PQLTEERR++LVK A+ K
Sbjct 61 EPRMLIIKPYEMSVMQEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDLVKVARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AK+S+RNIRRK M+ L +I+K+G+AGEDEV AEK+LDK T YV Q+DE+V KE
Sbjct 121 GEDAKISIRNIRRKGMDSLKKIQKDGDAGEDEVQAAEKELDKITQGYVAQVDEVVSSKEK 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|302554446|ref|ZP_07306788.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
40736]
gi|302472064|gb|EFL35157.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
40736]
Length=185
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/185 (65%), Positives = 151/185 (82%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MI+E L +AEEKMEKAV VA++D + IRTGRA+P MF++I DYYGA TPI QLAS +VP
Sbjct 1 MIEETLLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+ V+ P++ + LR IE AIR+SDLGVNP+NDG +IRV P+LTEERRRE +K AK K
Sbjct 61 EPRMAVVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AK+S+R++RRKA E + ++ K+GE GEDE RAEK+LD TT +YVTQ+DEL+KHKE
Sbjct 121 GEDAKISIRSVRRKAKEAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVTQVDELLKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|336325817|ref|YP_004605783.1| ribosome recycling factor [Corynebacterium resistens DSM 45100]
gi|336101799|gb|AEI09619.1| Ribosome recycling factor [Corynebacterium resistens DSM 45100]
Length=185
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/185 (65%), Positives = 154/185 (84%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MID+ L ++EE+M +V AR++L+TIRTGRANP MF+ I +YYG TPITQ+A+I+VP
Sbjct 1 MIDDILLESEERMTSSVEHAREELTTIRTGRANPAMFNGIIAEYYGVPTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYEA+ ++ IE AIRNSDLGVNPTNDG ++RV VPQLTEERRR+LVK AK K
Sbjct 61 EPRMLIIKPYEASTMQDIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKVAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AK+++RNIRRK ME L +I+K+GEAGEDEV AEKDL+K T +V Q+D LV++KE
Sbjct 121 GEDAKIAIRNIRRKGMEGLGKIQKDGEAGEDEVKAAEKDLEKVTQNHVEQVDALVENKEK 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|311898628|dbj|BAJ31036.1| putative ribosome recycling factor [Kitasatospora setae KM-6054]
Length=185
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/185 (65%), Positives = 152/185 (83%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE L +AEEKMEKAV VA+DDL+ IRTGRA+P MF++I +YYGA TPI QLAS +VP
Sbjct 1 MIDETLLEAEEKMEKAVGVAKDDLAAIRTGRAHPAMFAKIVAEYYGALTPINQLASFSVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+ ++ P++ L+AIETAIR+SDLGVNP+NDG++IRV +PQLTEERRRE +KQA+ K
Sbjct 61 EPRMAMVTPFDKTALKAIETAIRDSDLGVNPSNDGSVIRVVLPQLTEERRREYIKQARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+AKVSVR+IRRKA + + ++ K+ E GED+ R EK+LD T ++V QIDEL+KHKE
Sbjct 121 GEDAKVSVRSIRRKAKDAIDKLVKDKEIGEDDGRRGEKELDDLTAKFVAQIDELLKHKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
>gi|38234084|ref|NP_939851.1| ribosome recycling factor [Corynebacterium diphtheriae NCTC 13129]
gi|47116991|sp|P61303.1|RRF_CORDI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|38200346|emb|CAE50032.1| ribosome recycling factor [Corynebacterium diphtheriae]
Length=185
Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/185 (63%), Positives = 149/185 (81%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LF+AEE M +V RD+L IRTGRANP MF+ + DYYG TPITQ+A+I+VP
Sbjct 1 MIDEILFEAEEHMNTSVERTRDELVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
EAR+++IKPYE + + IE AIRNSDLGVNPTNDG ++RV +PQLTEERRR++ K AK K
Sbjct 61 EARMLLIKPYEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMAKLAKSK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+ K+++RN+RRK M++L +I+K+G+AGEDEV AEK+LDK T +YV Q+DE+V KE
Sbjct 121 GEDGKIAIRNVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKVTAKYVAQVDEVVAKKEA 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|25028466|ref|NP_738520.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
gi|259507526|ref|ZP_05750426.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
gi|29336541|sp|Q8FP75.1|RRF_COREF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
Full=Ribosome-releasing factor
gi|23493751|dbj|BAC18720.1| putative ribosome recycling factor [Corynebacterium efficiens
YS-314]
gi|259164911|gb|EEW49465.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
Length=185
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/185 (63%), Positives = 148/185 (80%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LFD+EE+M V R+DL TIRTGRANP MF+ + +YYG TPITQ++SI+VP
Sbjct 1 MIDEILFDSEERMSNTVEHTREDLITIRTGRANPAMFNGVLAEYYGVPTPITQMSSISVP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
E R+++IKPYE + + IE AIRNSDLGVNPTNDG ++RV +PQLTEERRR++VK AK K
Sbjct 61 EPRMLIIKPYEMSSMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKIAKGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
GE+ K+++RN+RRK ME+L +++K+GE GEDEV AEK+LDK T YV Q+DE+V KE
Sbjct 121 GEDGKIAIRNVRRKGMEQLKKLQKDGEFGEDEVAAAEKELDKITAHYVEQVDEIVARKEA 180
Query 181 ELLEV 185
EL+EV
Sbjct 181 ELMEV 185
>gi|317508973|ref|ZP_07966606.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
gi|316252738|gb|EFV12175.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
Length=185
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/185 (64%), Positives = 152/185 (83%), Gaps = 0/185 (0%)
Query 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
MIDE LF+AEE+ME AV VA+D+ + IRTGRA +F+++ +DYYG TPI Q++S+ P
Sbjct 1 MIDEILFEAEERMELAVEVAKDEFAAIRTGRATASLFAKVVVDYYGTPTPIPQVSSVQTP 60
Query 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
+ RLVVIKPYEA+QLRAIE AI+ SDLG+NP+NDG ++RVA+P LTEERR+E KQA+ K
Sbjct 61 DPRLVVIKPYEASQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGK 120
Query 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
EEA+V+VRN+RRKA ++L ++ KEG+AGED+V RAEK+LDK T ++V IDELVK KE
Sbjct 121 AEEARVTVRNVRRKANDQLGKLAKEGQAGEDDVVRAEKELDKLTAKFVGTIDELVKKKEA 180
Query 181 ELLEV 185
ELLEV
Sbjct 181 ELLEV 185
Lambda K H
0.313 0.131 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 174138591420
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40