BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2885c
Length=460
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610022|ref|NP_217401.1| transposase [Mycobacterium tubercul... 927 0.0
gi|289553326|ref|ZP_06442536.1| transposase [Mycobacterium tuber... 926 0.0
gi|308373566|ref|ZP_07432874.2| transposase [Mycobacterium tuber... 915 0.0
gi|167969513|ref|ZP_02551790.1| transposase [Mycobacterium tuber... 901 0.0
gi|308374721|ref|ZP_07437115.2| transposase [Mycobacterium tuber... 899 0.0
gi|289759006|ref|ZP_06518384.1| conserved hypothetical protein [... 880 0.0
gi|31794061|ref|NP_856554.1| putative transposase [Mycobacterium... 877 0.0
gi|289444440|ref|ZP_06434184.1| transposase [Mycobacterium tuber... 873 0.0
gi|339295723|gb|AEJ47834.1| hypothetical protein CCDC5079_2644 [... 855 0.0
gi|340628796|ref|YP_004747248.1| putative transposase [Mycobacte... 791 0.0
gi|340627967|ref|YP_004746419.1| putative transposase [Mycobacte... 771 0.0
gi|15610115|ref|NP_217494.1| transposase [Mycobacterium tubercul... 768 0.0
gi|339632984|ref|YP_004724626.1| transposase [Mycobacterium afri... 766 0.0
gi|289575685|ref|ZP_06455912.1| transposase [Mycobacterium tuber... 764 0.0
gi|339299426|gb|AEJ51536.1| transposase [Mycobacterium tuberculo... 764 0.0
gi|15609928|ref|NP_217307.1| transposase [Mycobacterium tubercul... 762 0.0
gi|294994021|ref|ZP_06799712.1| transposase [Mycobacterium tuber... 761 0.0
gi|148823979|ref|YP_001288733.1| transposase [Mycobacterium tube... 760 0.0
gi|289448449|ref|ZP_06438193.1| transposase [Mycobacterium tuber... 760 0.0
gi|15842329|ref|NP_337366.1| IS1602 transposase [Mycobacterium t... 759 0.0
gi|289746594|ref|ZP_06505972.1| transposase [Mycobacterium tuber... 758 0.0
gi|340625715|ref|YP_004744167.1| putative transposase [Mycobacte... 757 0.0
gi|15843451|ref|NP_338488.1| IS1537 transposase [Mycobacterium t... 633 2e-179
gi|148825034|ref|YP_001289788.1| transposase [Mycobacterium tube... 633 2e-179
gi|15610963|ref|NP_218344.1| transposase [Mycobacterium tubercul... 632 4e-179
gi|167969942|ref|ZP_02552219.1| IS1537 transposase [Mycobacteriu... 631 6e-179
gi|289441265|ref|ZP_06431009.1| transposase [Mycobacterium tuber... 631 7e-179
gi|289751448|ref|ZP_06510826.1| transposase [Mycobacterium tuber... 520 3e-145
gi|50953767|ref|YP_061206.1| truncated IS1536 transposase [Mycob... 404 1e-110
gi|15607746|ref|NP_215120.1| hypothetical protein Rv0606 [Mycoba... 403 3e-110
gi|289758918|ref|ZP_06518296.1| predicted protein [Mycobacterium... 401 1e-109
gi|339295640|gb|AEJ47751.1| putative transposase [Mycobacterium ... 378 1e-102
gi|289446159|ref|ZP_06435903.1| transposase [Mycobacterium tuber... 363 2e-98
gi|289441995|ref|ZP_06431739.1| transposase [Mycobacterium tuber... 358 1e-96
gi|340628251|ref|YP_004746703.1| IS1539 transposase [Mycobacteri... 318 1e-84
gi|240171119|ref|ZP_04749778.1| putative transposase [Mycobacter... 278 1e-72
gi|296165345|ref|ZP_06847886.1| transposase [Mycobacterium paras... 278 1e-72
gi|32455749|ref|NP_862583.1| hypothetical protein pCLPp16 [Mycob... 278 1e-72
gi|339295639|gb|AEJ47750.1| transposase [Mycobacterium tuberculo... 267 3e-69
gi|289573552|ref|ZP_06453779.1| transposase [Mycobacterium tuber... 264 3e-68
gi|15608062|ref|NP_215437.1| transposase [Mycobacterium tubercul... 263 4e-68
gi|167967048|ref|ZP_02549325.1| transposase [Mycobacterium tuber... 263 5e-68
gi|289442337|ref|ZP_06432081.1| transposase [Mycobacterium tuber... 263 6e-68
gi|289757008|ref|ZP_06516386.1| transposase [Mycobacterium tuber... 263 7e-68
gi|289744653|ref|ZP_06504031.1| transposase [Mycobacterium tuber... 261 2e-67
gi|86742113|ref|YP_482513.1| transposase [Frankia sp. CcI3] >gi|... 256 5e-66
gi|295696698|ref|YP_003589936.1| transposase, IS605 OrfB family ... 255 1e-65
gi|306798812|ref|ZP_07437114.1| transposase [Mycobacterium tuber... 254 2e-65
gi|158316871|ref|YP_001509379.1| IS605 family transposase OrfB [... 251 2e-64
gi|158312542|ref|YP_001505050.1| IS605 family transposase OrfB [... 251 3e-64
>gi|15610022|ref|NP_217401.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15842427|ref|NP_337464.1| IS1539 transposase [Mycobacterium tuberculosis CDC1551]
gi|148662729|ref|YP_001284252.1| IS1539 transposase [Mycobacterium tuberculosis H37Ra]
33 more sequence titles
Length=460
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/460 (99%), Positives = 460/460 (100%), Gaps = 0/460 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT
Sbjct 1 MMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG
Sbjct 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA
Sbjct 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV
Sbjct 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT
Sbjct 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV
Sbjct 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
Query 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG
Sbjct 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
Query 421 AAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 460
AAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK
Sbjct 421 AAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 460
>gi|289553326|ref|ZP_06442536.1| transposase [Mycobacterium tuberculosis KZN 605]
gi|297635502|ref|ZP_06953282.1| transposase [Mycobacterium tuberculosis KZN 4207]
gi|297732501|ref|ZP_06961619.1| transposase [Mycobacterium tuberculosis KZN R506]
6 more sequence titles
Length=459
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/459 (100%), Positives = 459/459 (100%), Gaps = 0/459 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE
Sbjct 1 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK
Sbjct 61 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK
Sbjct 121 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL
Sbjct 181 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV
Sbjct 301 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 460
AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK
Sbjct 421 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 459
>gi|308373566|ref|ZP_07432874.2| transposase [Mycobacterium tuberculosis SUMu005]
gi|308337164|gb|EFP26015.1| transposase [Mycobacterium tuberculosis SUMu005]
Length=454
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/454 (99%), Positives = 454/454 (100%), Gaps = 0/454 (0%)
Query 7 VPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPS 66
+PEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPS
Sbjct 1 MPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPS 60
Query 67 LRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKT 126
LRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKT
Sbjct 61 LRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKT 120
Query 127 VGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARV 186
VGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARV
Sbjct 121 VGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARV 180
Query 187 LAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPN 246
LAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPN
Sbjct 181 LAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPN 240
Query 247 PRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKT 306
PRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKT
Sbjct 241 PRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKT 300
Query 307 HGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWF 366
HGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWF
Sbjct 301 HGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWF 360
Query 367 PSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRG 426
PSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRG
Sbjct 361 PSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRG 420
Query 427 ADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 460
ADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK
Sbjct 421 ADRKTGPGPAGGREARKATGHPAGEQPRDGVQVK 454
>gi|167969513|ref|ZP_02551790.1| transposase [Mycobacterium tuberculosis H37Ra]
gi|254551956|ref|ZP_05142403.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=448
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/448 (99%), Positives = 448/448 (100%), Gaps = 0/448 (0%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 72
+QAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 73 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 132
RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 133 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 192
KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 193 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 252
RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 253 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 312
ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 313 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 372
EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 373 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 432
HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG
Sbjct 361 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 420
Query 433 PGPAGGREARKATGHPAGEQPRDGVQVK 460
PGPAGGREARKATGHPAGEQPRDGVQVK
Sbjct 421 PGPAGGREARKATGHPAGEQPRDGVQVK 448
>gi|308374721|ref|ZP_07437115.2| transposase [Mycobacterium tuberculosis SUMu006]
gi|308340931|gb|EFP29782.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=446
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/446 (100%), Positives = 446/446 (100%), Gaps = 0/446 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE
Sbjct 1 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK
Sbjct 61 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK
Sbjct 121 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL
Sbjct 181 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV
Sbjct 301 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGH 447
AVKRGADRKTGPGPAGGREARKATGH
Sbjct 421 AVKRGADRKTGPGPAGGREARKATGH 446
>gi|289759006|ref|ZP_06518384.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298526354|ref|ZP_07013763.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|289714570|gb|EFD78582.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496148|gb|EFI31442.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=439
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/437 (99%), Positives = 437/437 (100%), Gaps = 0/437 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT
Sbjct 1 MMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG
Sbjct 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA
Sbjct 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV
Sbjct 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT
Sbjct 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV
Sbjct 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
Query 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG
Sbjct 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
Query 421 AAVKRGADRKTGPGPAG 437
AAVKRGADRKTGPGPAG
Sbjct 421 AAVKRGADRKTGPGPAG 437
>gi|31794061|ref|NP_856554.1| putative transposase [Mycobacterium bovis AF2122/97]
gi|121638766|ref|YP_978990.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991258|ref|YP_002645947.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
10 more sequence titles
Length=439
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/437 (99%), Positives = 436/437 (99%), Gaps = 0/437 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT
Sbjct 1 MMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG
Sbjct 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA
Sbjct 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV
Sbjct 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT
Sbjct 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV
Sbjct 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
Query 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
VADRWFPSSKTCHACRHVQDIGWDE WQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG
Sbjct 361 VADRWFPSSKTCHACRHVQDIGWDEIWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
Query 421 AAVKRGADRKTGPGPAG 437
AAVKRGADRKTGPGPAG
Sbjct 421 AAVKRGADRKTGPGPAG 437
>gi|289444440|ref|ZP_06434184.1| transposase [Mycobacterium tuberculosis T46]
gi|289571075|ref|ZP_06451302.1| transposase [Mycobacterium tuberculosis T17]
gi|289751550|ref|ZP_06510928.1| transposase [Mycobacterium tuberculosis T92]
gi|289417359|gb|EFD14599.1| transposase [Mycobacterium tuberculosis T46]
gi|289544829|gb|EFD48477.1| transposase [Mycobacterium tuberculosis T17]
gi|289692137|gb|EFD59566.1| transposase [Mycobacterium tuberculosis T92]
Length=439
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/437 (99%), Positives = 435/437 (99%), Gaps = 0/437 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT
Sbjct 1 MMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG
Sbjct 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA
Sbjct 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV
Sbjct 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT
Sbjct 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLAKTHGRIVVEGLDAAGMLRQKGL GARARRRALSDAALATPRRHLSYKTGWYGSSLV
Sbjct 301 TRLAKTHGRIVVEGLDAAGMLRQKGLLGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
Query 361 VADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
VADRWFPSSKTCHACRHVQDIGWDE WQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG
Sbjct 361 VADRWFPSSKTCHACRHVQDIGWDEIWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVG 420
Query 421 AAVKRGADRKTGPGPAG 437
AAVKRGADRKTGPGPAG
Sbjct 421 AAVKRGADRKTGPGPAG 437
>gi|339295723|gb|AEJ47834.1| hypothetical protein CCDC5079_2644 [Mycobacterium tuberculosis
CCDC5079]
gi|339299339|gb|AEJ51449.1| hypothetical protein CCDC5180_2612 [Mycobacterium tuberculosis
CCDC5180]
Length=427
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/425 (99%), Positives = 425/425 (100%), Gaps = 0/425 (0%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 72
+QAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 73 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 132
RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 133 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 192
KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 193 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 252
RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 253 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 312
ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 313 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 372
EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 373 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 432
HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG
Sbjct 361 HACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTG 420
Query 433 PGPAG 437
PGPAG
Sbjct 421 PGPAG 425
>gi|340628796|ref|YP_004747248.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340006986|emb|CCC46177.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/458 (85%), Positives = 413/458 (91%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G VL
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL+ LR SRARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSDAAL TPRRHLSYKTGWYGS+LVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTGWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQDIGWDE WQCDGCS+THQRDDNAA+NLARYEEP SVVGPVGA
Sbjct 361 ADRWFPSSKTCHTCGHVQDIGWDETWQCDGCSVTHQRDDNAAVNLARYEEPVSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK A EQPRDGVQV
Sbjct 421 AVKRGADRKTGPCPAGGCEARKGGSRMAAEQPRDGVQV 458
>gi|340627967|ref|YP_004746419.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340006157|emb|CCC45331.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/458 (84%), Positives = 409/458 (90%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQV NPRPLDAALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLDAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
>gi|15610115|ref|NP_217494.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15842532|ref|NP_337569.1| IS1538 transposase [Mycobacterium tuberculosis CDC1551]
gi|31794154|ref|NP_856647.1| resolvase [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=459
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/458 (83%), Positives = 408/458 (90%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
>gi|339632984|ref|YP_004724626.1| transposase [Mycobacterium africanum GM041182]
gi|339332340|emb|CCC28053.1| putative transposase [Mycobacterium africanum GM041182]
Length=459
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/458 (83%), Positives = 407/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK + A EQP DGVQV
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPLDGVQV 458
>gi|289575685|ref|ZP_06455912.1| transposase [Mycobacterium tuberculosis K85]
gi|289540116|gb|EFD44694.1| transposase [Mycobacterium tuberculosis K85]
Length=459
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/458 (83%), Positives = 406/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ R GK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRVGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGK VG PRFK+KGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK + A EQP DGVQV
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPLDGVQV 458
>gi|339299426|gb|AEJ51536.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=459
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/458 (83%), Positives = 407/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M + +VP+GW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI+AW A GT
Sbjct 1 MPKFEVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKADIQAWHASGTV 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD VCVN +TG WWPECSKEAYADGIAGAV+AYWNWQ+ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDDVCVNTETGVAWWPECSKEAYADGIAGAVEAYWNWQTSRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
RAGK VG PRFK+KGRD DRV TTGAMRVEPDRRHLTLPVIGT+RT+ENTRR+ERLI
Sbjct 121 RAGKRVGFPRFKRKGRDQDRVSCTTGAMRVEPDRRHLTLPVIGTVRTHENTRRIERLIKA 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+GT +
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPKVVHPGSRVGVDVGVRRLATVATADGTAI 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
EQV NPRPL AALR LR V RARSRCTKGSRRY ERTT++SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THGRIVVEGLDA MLRQKGLPGARARRR LSDAAL TPRRHLSYKT WYGS+LVV
Sbjct 301 RLAQTHGRIVVEGLDATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKTVWYGSALVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCHACRHVQDIGWDE+WQCD CS+ HQRDD AAINLARYEE S+VGPVGA
Sbjct 361 ADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYEETSSIVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKTGP PAGG EARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQV 458
>gi|15609928|ref|NP_217307.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|31793967|ref|NP_856460.1| transposase [Mycobacterium bovis AF2122/97]
gi|121638671|ref|YP_978895.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
53 more sequence titles
Length=459
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/458 (83%), Positives = 405/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAGMLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|294994021|ref|ZP_06799712.1| transposase [Mycobacterium tuberculosis 210]
Length=386
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/379 (99%), Positives = 379/379 (100%), Gaps = 0/379 (0%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 72
+QAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK
Sbjct 1 MQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKPSLRVLRK 60
Query 73 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 132
RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF
Sbjct 61 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 120
Query 133 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 192
KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR
Sbjct 121 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 180
Query 193 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 252
RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA
Sbjct 181 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDA 240
Query 253 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 312
ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV
Sbjct 241 ALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVV 300
Query 313 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 372
EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC
Sbjct 301 EGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTC 360
Query 373 HACRHVQDIGWDEKWQCDG 391
HACRHVQDIGWDEKWQCDG
Sbjct 361 HACRHVQDIGWDEKWQCDG 379
>gi|148823979|ref|YP_001288733.1| transposase [Mycobacterium tuberculosis F11]
gi|253798125|ref|YP_003031126.1| transposase [Mycobacterium tuberculosis KZN 1435]
gi|289553422|ref|ZP_06442632.1| transposase [Mycobacterium tuberculosis KZN 605]
10 more sequence titles
Length=459
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/458 (83%), Positives = 404/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDR HLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRSHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAGMLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|289448449|ref|ZP_06438193.1| transposase [Mycobacterium tuberculosis CPHL_A]
gi|289421407|gb|EFD18608.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=459
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/458 (83%), Positives = 405/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAG+LRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGILRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|15842329|ref|NP_337366.1| IS1602 transposase [Mycobacterium tuberculosis CDC1551]
gi|13882625|gb|AAK47180.1| IS1602, transposase [Mycobacterium tuberculosis CDC1551]
Length=459
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/458 (83%), Positives = 404/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRR ATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRXATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAGMLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|289746594|ref|ZP_06505972.1| transposase [Mycobacterium tuberculosis 02_1987]
gi|289687122|gb|EFD54610.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=459
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/458 (83%), Positives = 404/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAGMLRQ+G GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGPLGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|340625715|ref|YP_004744167.1| putative transposase [Mycobacterium canettii CIPT 140010059]
gi|340003905|emb|CCC43037.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=459
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/458 (83%), Positives = 404/458 (89%), Gaps = 0/458 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT+ QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTEDQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+EN RRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENKRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VL
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL LR V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT
Sbjct 241 ERVPNPRPLDAALNELRHVCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
LAKTHGRIVVEGLDAAGMLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVV
Sbjct 301 HLAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVV 360
Query 362 ADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGA 421
ADRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVG VGA
Sbjct 361 ADRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGLVGA 420
Query 422 AVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
AVKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 421 AVKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 458
>gi|15843451|ref|NP_338488.1| IS1537 transposase [Mycobacterium tuberculosis CDC1551]
gi|31795001|ref|NP_857494.1| putative transposase [Mycobacterium bovis AF2122/97]
gi|121639745|ref|YP_979969.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
30 more sequence titles
Length=408
Score = 633 bits (1633), Expect = 2e-179, Method: Compositional matrix adjust.
Identities = 310/368 (85%), Positives = 335/368 (92%), Gaps = 0/368 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MMARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGI 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+G
Sbjct 61 GTVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KR GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 KREGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G V
Sbjct 181 TGRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LE+VPNPRPLDAAL+ LR SRARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLHVLT
Sbjct 241 LEEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSD+AL TPRRHLSYKTGWYGS+LV
Sbjct 301 TRLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALV 360
Query 361 VADRWFPS 368
VADRWFPS
Sbjct 361 VADRWFPS 368
>gi|148825034|ref|YP_001289788.1| transposase [Mycobacterium tuberculosis F11]
gi|254233316|ref|ZP_04926642.1| hypothetical protein TBCG_03753 [Mycobacterium tuberculosis C]
gi|254366371|ref|ZP_04982415.1| transposase [Mycobacterium tuberculosis str. Haarlem]
26 more sequence titles
Length=407
Score = 633 bits (1632), Expect = 2e-179, Method: Compositional matrix adjust.
Identities = 310/367 (85%), Positives = 334/367 (92%), Gaps = 0/367 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G VL
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLDAAL+ LR SRARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDAALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSD+AL TPRRHLSYKTGWYGS+LVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 360
Query 362 ADRWFPS 368
ADRWFPS
Sbjct 361 ADRWFPS 367
>gi|15610963|ref|NP_218344.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|148663695|ref|YP_001285218.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
gi|2224818|emb|CAB10011.1| POSSIBLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
gi|148507847|gb|ABQ75656.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
Length=408
Score = 632 bits (1630), Expect = 4e-179, Method: Compositional matrix adjust.
Identities = 309/368 (84%), Positives = 334/368 (91%), Gaps = 0/368 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MMARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGI 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+G
Sbjct 61 GTVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KR GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 KREGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G V
Sbjct 181 TGRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LE+VPNPRPLD AL+ LR SRARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLHVLT
Sbjct 241 LEEVPNPRPLDTALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSD+AL TPRRHLSYKTGWYGS+LV
Sbjct 301 TRLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALV 360
Query 361 VADRWFPS 368
VADRWFPS
Sbjct 361 VADRWFPS 368
>gi|167969942|ref|ZP_02552219.1| IS1537 transposase [Mycobacterium tuberculosis H37Ra]
gi|308232584|ref|ZP_07416527.2| transposase [Mycobacterium tuberculosis SUMu001]
gi|308379635|ref|ZP_07486968.2| transposase [Mycobacterium tuberculosis SUMu010]
6 more sequence titles
Length=407
Score = 631 bits (1628), Expect = 6e-179, Method: Compositional matrix adjust.
Identities = 309/367 (85%), Positives = 333/367 (91%), Gaps = 0/367 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGIG 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 REGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIAT 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVL 241
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G VL
Sbjct 181 GRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAVL 240
Query 242 EQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTT 301
E+VPNPRPLD AL+ LR SRARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLHVLTT
Sbjct 241 EEVPNPRPLDTALKELRYASRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHVLTT 300
Query 302 RLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVV 361
RLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSD+AL TPRRHLSYKTGWYGS+LVV
Sbjct 301 RLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALVV 360
Query 362 ADRWFPS 368
ADRWFPS
Sbjct 361 ADRWFPS 367
>gi|289441265|ref|ZP_06431009.1| transposase [Mycobacterium tuberculosis T46]
gi|289572081|ref|ZP_06452308.1| transposase [Mycobacterium tuberculosis T17]
gi|289748358|ref|ZP_06507736.1| transposase [Mycobacterium tuberculosis T92]
gi|289414184|gb|EFD11424.1| transposase [Mycobacterium tuberculosis T46]
gi|289545835|gb|EFD49483.1| transposase [Mycobacterium tuberculosis T17]
gi|289688945|gb|EFD56374.1| transposase [Mycobacterium tuberculosis T92]
Length=408
Score = 631 bits (1628), Expect = 7e-179, Method: Compositional matrix adjust.
Identities = 309/368 (84%), Positives = 334/368 (91%), Gaps = 0/368 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MAR +VPEGWCVQAFRFTL+PT+ QA +LARHFGARRKA+NW V LKADI+AWR G
Sbjct 1 MMARFEVPEGWCVQAFRFTLDPTEDQARALARHFGARRKAYNWAVATLKADIEAWRVTGI 60
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
+ KPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+G
Sbjct 61 GTVKPSLRVLRKRWNTVKDEVCVNAETGAVWWPECSKEAYADGIGGAVDAYWNWQNSRSG 120
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KR GKT+G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPV+GT+RT+ENTRR+ERLIA
Sbjct 121 KREGKTMGFPRFKKKGRDQDRVTFTTGAMRVEPDRRHLTLPVVGTVRTHENTRRIERLIA 180
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
GRARVLAI+VRRNGTRLDASVRVLVQRPQQ VA P SRVGVDVGVRRLATVA+ G V
Sbjct 181 TGRARVLAISVRRNGTRLDASVRVLVQRPQQPNVAQPGSRVGVDVGVRRLATVANEAGAV 240
Query 241 LEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLT 300
LE+VPNPRPLDAAL+ LR SRARSRCTKGSR Y ERTTE+SRLHRRVNDVRTHHLHVLT
Sbjct 241 LEEVPNPRPLDAALKELRYASRARSRCTKGSRHYRERTTEISRLHRRVNDVRTHHLHVLT 300
Query 301 TRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLV 360
TRLA+THG IVVEGLDAAGMLRQKGLPGARARRR LSD+AL TPRRHLSYKTGWYGS+LV
Sbjct 301 TRLAQTHGHIVVEGLDAAGMLRQKGLPGARARRRGLSDSALGTPRRHLSYKTGWYGSALV 360
Query 361 VADRWFPS 368
VADRWFPS
Sbjct 361 VADRWFPS 368
>gi|289751448|ref|ZP_06510826.1| transposase [Mycobacterium tuberculosis T92]
gi|289692035|gb|EFD59464.1| transposase [Mycobacterium tuberculosis T92]
Length=324
Score = 520 bits (1338), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 266/320 (84%), Positives = 281/320 (88%), Gaps = 0/320 (0%)
Query 140 DRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVRRNGTRLD 199
DR F TGAMRV P R +LTLP+IGT+RT+ENTRRVERLIAKGR+RVLAITVRRNGTR+D
Sbjct 4 DRENFPTGAMRVRPARPNLTLPIIGTVRTHENTRRVERLIAKGRSRVLAITVRRNGTRID 63
Query 200 ASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPLDAALRGLRR 259
ASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G VLE+VPNPRPLDAAL LR
Sbjct 64 ASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAVLERVPNPRPLDAALNELRH 123
Query 260 VSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVVEGLDAAG 319
V RARSRCTKGSRRY ERTTE+SRLHRRVNDVRTHHLH LTT LAKTHGRIVVEGLDAAG
Sbjct 124 VCRARSRCTKGSRRYRERTTEISRLHRRVNDVRTHHLHCLTTHLAKTHGRIVVEGLDAAG 183
Query 320 MLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHACRHVQ 379
MLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVVADRWFPSSKTCH C HVQ
Sbjct 184 MLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVVADRWFPSSKTCHVCGHVQ 243
Query 380 DIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTGPGPAGGR 439
+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGAAVKRGADRKT PG AGGR
Sbjct 244 EIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGAAVKRGADRKTRPGRAGGR 303
Query 440 EARKATGHPAGEQPRDGVQV 459
EARK + A EQPRDGVQV
Sbjct 304 EARKGSSRKAAEQPRDGVQV 323
>gi|50953767|ref|YP_061206.1| truncated IS1536 transposase [Mycobacterium tuberculosis CDC1551]
gi|308231598|ref|ZP_07663888.1| transposase [Mycobacterium tuberculosis SUMu001]
gi|308369994|ref|ZP_07666839.1| transposase [Mycobacterium tuberculosis SUMu002]
22 more sequence titles
Length=273
Score = 404 bits (1039), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 198/237 (84%), Positives = 215/237 (91%), Gaps = 0/237 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M RL++P GWCVQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI+AWRA G +
Sbjct 27 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 86
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGIAGAVDAYWNWQ RAGK
Sbjct 87 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 146
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRDADRV FTTGAMRVEPDRRHLTLPVIG +RT+ENTRR+ERLIAK
Sbjct 147 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 206
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEG 238
RARVLAITVRRNGTRLDASVRVLVQRPQQ V LP+SR+GVDVGVRRLATVA A+G
Sbjct 207 DRARVLAITVRRNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 263
>gi|15607746|ref|NP_215120.1| hypothetical protein Rv0606 [Mycobacterium tuberculosis H37Rv]
gi|31791788|ref|NP_854281.1| transposase [Mycobacterium bovis AF2122/97]
gi|121636524|ref|YP_976747.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
49 more sequence titles
Length=247
Score = 403 bits (1036), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 198/237 (84%), Positives = 215/237 (91%), Gaps = 0/237 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M RL++P GWCVQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI+AWRA G +
Sbjct 1 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGIAGAVDAYWNWQ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRDADRV FTTGAMRVEPDRRHLTLPVIG +RT+ENTRR+ERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEG 238
RARVLAITVRRNGTRLDASVRVLVQRPQQ V LP+SR+GVDVGVRRLATVA A+G
Sbjct 181 DRARVLAITVRRNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 237
>gi|289758918|ref|ZP_06518296.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289714482|gb|EFD78494.1| predicted protein [Mycobacterium tuberculosis T85]
Length=303
Score = 401 bits (1030), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 200/260 (77%), Positives = 222/260 (86%), Gaps = 0/260 (0%)
Query 1 VMARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT 60
+MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G
Sbjct 29 LMAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGI 88
Query 61 ESAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAG 120
++AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+G
Sbjct 89 QTAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSG 148
Query 121 KRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIA 180
KR GK +G PRFKKKGRD DRV FTTGAM VEPDR GT+RT+ENTRRVERLIA
Sbjct 149 KRDGKRMGFPRFKKKGRDPDRVTFTTGAMGVEPDRATSRCRSFGTVRTHENTRRVERLIA 208
Query 181 KGRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTV 240
KGR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVGVRRLATVA A+G V
Sbjct 209 KGRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVGVRRLATVATADGAV 268
Query 241 LEQVPNPRPLDAALRGLRRV 260
LE+VPNPRPLDAAL LR V
Sbjct 269 LERVPNPRPLDAALNELRHV 288
>gi|339295640|gb|AEJ47751.1| putative transposase [Mycobacterium tuberculosis CCDC5079]
Length=274
Score = 378 bits (970), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 182/225 (81%), Positives = 201/225 (90%), Gaps = 0/225 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MA+ ++PEGW VQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI AW+A G +
Sbjct 1 MAKFEIPEGWMVQAFRFTLDPTAEQARALARHFGARRKAYNWTVATLKADIDAWQATGIQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVK+ VCVN +TG VWWPECSKEAYADGI GAVDAYWNWQ+ R+GK
Sbjct 61 TAKPSLRVLRKRWNTVKNDVCVNIETGVVWWPECSKEAYADGIDGAVDAYWNWQNSRSGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRD DRV FTTGAMRVEPDRRHLTLPVIGT+RT+ENTRRVERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDPDRVTFTTGAMRVEPDRRHLTLPVIGTVRTHENTRRVERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVG 226
GR+RVLAITVRRNGTR+DASVRVLVQRPQQ +V P SRVGVDVG
Sbjct 181 GRSRVLAITVRRNGTRIDASVRVLVQRPQQPKVTDPGSRVGVDVG 225
>gi|289446159|ref|ZP_06435903.1| transposase [Mycobacterium tuberculosis CPHL_A]
gi|289419117|gb|EFD16318.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=216
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/208 (85%), Positives = 190/208 (92%), Gaps = 0/208 (0%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
M RL++P GWCVQAFRFTL+PT QA +LARHFGARRKA+NWTV LKADI+AWRA G +
Sbjct 1 MPRLEIPNGWCVQAFRFTLDPTAEQAHALARHFGARRKAYNWTVAQLKADIQAWRATGAQ 60
Query 62 SAKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGK 121
+AKPSLRVLRKRWNTVKD+VCVNA+TG VWWPECSKEAYADGIAGAVDAYWNWQ RAGK
Sbjct 61 TAKPSLRVLRKRWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGK 120
Query 122 RAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAK 181
R GK +G PRFKKKGRDADRV FTTGAMRVEPDRRHLTLPVIG +RT+ENTRR+ERLIAK
Sbjct 121 RDGKRMGFPRFKKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAK 180
Query 182 GRARVLAITVRRNGTRLDASVRVLVQRP 209
RARVLAITVRRNGTRLDASVRVLVQRP
Sbjct 181 DRARVLAITVRRNGTRLDASVRVLVQRP 208
>gi|289441995|ref|ZP_06431739.1| transposase [Mycobacterium tuberculosis T46]
gi|289414914|gb|EFD12154.1| transposase [Mycobacterium tuberculosis T46]
Length=238
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/226 (81%), Positives = 199/226 (89%), Gaps = 1/226 (0%)
Query 14 QAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADI-KAWRADGTESAKPSLRVLRK 72
+AFRFTL+PT QA +LARHFGARRKA+N A ++ K WRA G ++AKPSLRVLRK
Sbjct 3 KAFRFTLDPTAEQAHALARHFGARRKAYNLDRRAAESRYSKRWRATGAQTAKPSLRVLRK 62
Query 73 RWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVPRF 132
RWNTVKD+VCVNA+TG VWWPECSKEAYADGIAGAVDAYWNWQ RAGKR GK +G PRF
Sbjct 63 RWNTVKDEVCVNAETGTVWWPECSKEAYADGIAGAVDAYWNWQQRRAGKRDGKRMGFPRF 122
Query 133 KKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAITVR 192
KKKGRDADRV FTTGAMRVEPDRRHLTLPVIG +RT+ENTRR+ERLIAK RARVLAITVR
Sbjct 123 KKKGRDADRVSFTTGAMRVEPDRRHLTLPVIGCVRTHENTRRIERLIAKDRARVLAITVR 182
Query 193 RNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEG 238
RNGTRLDASVRVLVQRPQQ V LP+SR+GVDVGVRRLATVA A+G
Sbjct 183 RNGTRLDASVRVLVQRPQQPNVELPESRIGVDVGVRRLATVATADG 228
>gi|340628251|ref|YP_004746703.1| IS1539 transposase [Mycobacterium canettii CIPT 140010059]
gi|340006441|emb|CCC45623.1| IS1539 transposase [Mycobacterium canettii CIPT 140010059]
Length=184
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/183 (87%), Positives = 164/183 (90%), Gaps = 4/183 (2%)
Query 281 LSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAA 340
+SRLHRRVNDVRTHHLHVLTTRLA+THGRIVVEGLDAAGMLRQKGLPGARARRR LSD+A
Sbjct 1 MSRLHRRVNDVRTHHLHVLTTRLAQTHGRIVVEGLDAAGMLRQKGLPGARARRRGLSDSA 60
Query 341 LATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHACRHVQDIGWDEKWQCD----GCSITH 396
L TPRRHLSYKTGWYGS LVVADRWFPSSKTCH C HVQDIGWDEKW CD GC +TH
Sbjct 61 LGTPRRHLSYKTGWYGSELVVADRWFPSSKTCHGCGHVQDIGWDEKWICDPTDGGCGVTH 120
Query 397 QRDDNAAINLARYEEPPSVVGPVGAAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDG 456
QRDD AAINLARYEEP SVVGPVGAAVKR AD KT PG GG EARKATGHPAGEQPRDG
Sbjct 121 QRDDCAAINLARYEEPVSVVGPVGAAVKRAADPKTRPGRTGGDEARKATGHPAGEQPRDG 180
Query 457 VQV 459
V+V
Sbjct 181 VRV 183
>gi|240171119|ref|ZP_04749778.1| putative transposase [Mycobacterium kansasii ATCC 12478]
Length=550
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 196/463 (43%), Positives = 250/463 (54%), Gaps = 37/463 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRADGT-ES 62
+V GW V A +F + P + + A+L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 EVASGWLVTAAKFEVEWPAEPERAALVRSHFGARRKAFNWGLGRVKADLDAKSADPEHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L LRK WN K +V WW SKE Y+ G+A A NW + + G+R
Sbjct 138 LGWDLGALRKAWNLAKHEVAP-------WWATNSKECYSAGLADLAQALSNWSASKNGRR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRF RD RV FTTG MRVE DR +T+PVI +R+ ENTRRV+R +A G
Sbjct 191 QGRRVGFPRFATARRDPGRVRFTTGTMRVEDDRHSITVPVISALRSKENTRRVQRHLASG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRRVAL-PDSRVGVDVGVRRLATVADAE-GTV 240
RAR+L +T+ + RL SV ++ P R P R GVD+GVR LATVA + T
Sbjct 251 RARILNMTLSQRWGRLFVSVGYALRTPSAGRTPTQPTVRAGVDLGVRTLATVATIDPATG 310
Query 241 LEQV---PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
+E V NP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 VETVVEYKNPAPLKATLAARRRAGRELSRRIPGSHGHRAAKAKLTRLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT+LA T+G++V+E LD A M R G RA RR++SDAA+ L+YKT +GS
Sbjct 371 QLTTQLAGTYGQVVIEDLDVAAMKRSMGR---RAFRRSVSDAAMGLVAPMLAYKTTRHGS 427
Query 358 SLVVADRWFPSSKTCHACRHVQD-----IG---WDEKWQCDGCSITHQRDDNAAINLARY 409
+L+VADRWFPSS+ H C H +G D+ C RD NAA+NL +
Sbjct 428 TLIVADRWFPSSQLHHRCTHPNGTPCRLVGKGRIDKHLICPQTGEMVDRDRNAALNLRDW 487
Query 410 EE----------PPSVVGPVGAAVKRGADRKTGPGPAGGREAR 442
+ PSV GP +V G TG AGG R
Sbjct 488 PDYASCGPVGTTAPSVPGPT-ESVGTGHGADTGSTGAGGASVR 529
>gi|296165345|ref|ZP_06847886.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899236|gb|EFG78701.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=551
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 196/463 (43%), Positives = 250/463 (54%), Gaps = 37/463 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRADGT-ES 62
+V GW V A +F + P + + A+L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 79 EVASGWLVTAAKFEVEWPAEPERAALVRSHFGARRKAFNWGLGRVKADLDAKSADPEHES 138
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L LRK WN K +V WW SKE Y+ G+A A NW + + G+R
Sbjct 139 LGWDLGALRKAWNLAKHEVAP-------WWATNSKECYSAGLADLAQALSNWSASKNGRR 191
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRF RD RV FTTG MRVE DR +T+PVI +R+ ENTRRV+R +A G
Sbjct 192 QGRRVGFPRFATARRDPGRVRFTTGTMRVEDDRHSITVPVISALRSKENTRRVQRHLASG 251
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRRVAL-PDSRVGVDVGVRRLATVADAE-GTV 240
RAR+L +T+ + RL SV ++ P R P R GVD+GVR LATVA + T
Sbjct 252 RARILNMTLSQRWGRLFVSVGYALRTPSAGRTPTQPTVRAGVDLGVRTLATVATIDPATG 311
Query 241 LEQV---PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
+E V NP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 312 VETVVEYKNPAPLKATLAARRRAGRELSRRIPGSHGHRAAKAKLTRLDRRCVHLRREAAH 371
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT+LA T+G++V+E LD A M R G RA RR++SDAA+ L+YKT +GS
Sbjct 372 QLTTQLAGTYGQVVIEDLDVAAMKRSMGR---RAFRRSVSDAAMGLVAPMLAYKTTRHGS 428
Query 358 SLVVADRWFPSSKTCHACRHVQD-----IG---WDEKWQCDGCSITHQRDDNAAINLARY 409
+L+VADRWFPSS+ H C H +G D+ C RD NAA+NL +
Sbjct 429 TLIVADRWFPSSQLHHRCTHPNGTPCRLVGKGRIDKHLICPQTGEMVDRDRNAALNLRDW 488
Query 410 EE----------PPSVVGPVGAAVKRGADRKTGPGPAGGREAR 442
+ PSV GP +V G TG AGG R
Sbjct 489 PDYASCGPVGTTAPSVPGPT-ESVGTGHGADTGSTGAGGASVR 530
>gi|32455749|ref|NP_862583.1| hypothetical protein pCLPp16 [Mycobacterium celatum]
gi|13810890|gb|AAK40078.1| Rv0922-like protein [Mycobacterium celatum]
Length=485
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 207/485 (43%), Positives = 256/485 (53%), Gaps = 52/485 (10%)
Query 2 MARLKVPEGWCVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTE 61
MAR +VPEGW QA+RF L+PT TQ LA H GA R A N + +KA + RAD
Sbjct 1 MARFEVPEGWTAQAYRFALDPTPTQLRGLASHAGAARFAHNHMLALVKATMDQ-RADERS 59
Query 62 SAKP----------SLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAY 111
P SL LR+ WN K WW E SKEAY G+
Sbjct 60 YGVPESELTPVLGWSLPALRRVWNQRKAWCAP-------WWGENSKEAYNTGLDALARGL 112
Query 112 WNWQSCRAGKRAGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYEN 171
W R G+R G+ VG PRFK R V FTTG +R+E DRRH+TLP +G IRT+E+
Sbjct 113 EAWSKSRRGQRKGRAVGFPRFKT-ARAGKSVRFTTGTIRIEADRRHVTLPRLGAIRTHES 171
Query 172 TRRVERLIAKGRARVLAITVRRNGT-RLDASVRVLVQ---RPQQRRVALPDSRVGVDVGV 227
TR++ R I G AR+L+ TVR++ R +++V+V+ RP R + P + VGVDVGV
Sbjct 172 TRKLARRIEAGTARILSATVRQDSAGRWHCALQVIVEAKTRPAHARRS-PHAGVGVDVGV 230
Query 228 R--RLATVADAEGTVLEQVPNPRPLDAALRGLRRVSRARSR------CTKGSRRYCE--- 276
+ L VA +G ++++P P+ L AA LR + R +R G+RR
Sbjct 231 KADALLVVASPDGVEVDRIPAPKSLTAAQSRLRALQRRAARQHGPYDFQTGTRRQPSRRW 290
Query 277 RTTE--LSRLHRRVNDVRTHHLHVLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRR 334
RTT+ + R H VR LH TT LA+ H IVVE L+AAGM R G R R
Sbjct 291 RTTQARIGRTHAHAAAVRRDVLHKATTALAQQHQVIVVETLNAAGM-RSAGGARKRGLNR 349
Query 335 ALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHAC--RHVQDIGWDEKWQCDGC 392
AL+DAALA RR L YKT WYGS L ADR+FPSSKTC C R D + C+ C
Sbjct 350 ALADAALAEVRRMLGYKTRWYGSRLEEADRYFPSSKTCTGCGRRKPNLTLADRVFDCEHC 409
Query 393 SITHQRDDNAAINLARYEEP------PSVVGPVGAAVKRGADRKTGPGPAG---GREARK 443
RD AAINLAR EP P+ GPV RGA +T P PAG G EA
Sbjct 410 GTRIDRDLGAAINLARLGEPNWGEQSPAGSGPVAG---RGATHETEPAPAGDAAGNEAST 466
Query 444 ATGHP 448
HP
Sbjct 467 PHHHP 471
>gi|339295639|gb|AEJ47750.1| transposase [Mycobacterium tuberculosis CCDC5079]
Length=158
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/157 (84%), Positives = 137/157 (88%), Gaps = 0/157 (0%)
Query 303 LAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVA 362
+AKTHGRIVVEGLDAAGMLRQ+GL GARARRR LSDAAL TPRRHLSYKTGWYGS LVVA
Sbjct 1 MAKTHGRIVVEGLDAAGMLRQQGLSGARARRRGLSDAALGTPRRHLSYKTGWYGSQLVVA 60
Query 363 DRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVVGPVGAA 422
DRWFPSSKTCH C HVQ+IGW E WQCD CS +HQRDD AAINLARYE+ SVVGPVGAA
Sbjct 61 DRWFPSSKTCHVCGHVQEIGWAEHWQCDSCSASHQRDDCAAINLARYEDTSSVVGPVGAA 120
Query 423 VKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
VKRGADRKT PG AGGREARK + A EQPRDGVQV
Sbjct 121 VKRGADRKTRPGRAGGREARKGSSRKAAEQPRDGVQV 157
>gi|289573552|ref|ZP_06453779.1| transposase [Mycobacterium tuberculosis K85]
gi|289537983|gb|EFD42561.1| transposase [Mycobacterium tuberculosis K85]
Length=550
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 237/446 (54%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G+A NW++ + G R
Sbjct 138 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGLADLAQGLANWKAGKNGTR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 191 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 251 RAQILNMTLSQQWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 310
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 371 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 427
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 428 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 487
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 488 PDNAS-RGPVGTTA------PSAPGP 506
>gi|15608062|ref|NP_215437.1| transposase [Mycobacterium tuberculosis H37Rv]
gi|15840345|ref|NP_335382.1| IS1535 transposase [Mycobacterium tuberculosis CDC1551]
gi|31792110|ref|NP_854603.1| putative transposase [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=550
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 237/446 (54%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G+A NW++ + G R
Sbjct 138 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGLADLAQGLANWKAGKNGTR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 191 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 251 RAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 310
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 371 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 427
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 428 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 487
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 488 PDNAS-RGPVGTTA------PSAPGP 506
>gi|167967048|ref|ZP_02549325.1| transposase [Mycobacterium tuberculosis H37Ra]
gi|254549903|ref|ZP_05140350.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|308377549|ref|ZP_07479626.2| transposase [Mycobacterium tuberculosis SUMu009]
gi|308397507|ref|ZP_07492558.2| transposase [Mycobacterium tuberculosis SUMu012]
gi|308355357|gb|EFP44208.1| transposase [Mycobacterium tuberculosis SUMu009]
gi|308366861|gb|EFP55712.1| transposase [Mycobacterium tuberculosis SUMu012]
gi|323720633|gb|EGB29711.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=546
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 237/446 (54%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 74 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 133
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G+A NW++ + G R
Sbjct 134 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGLADLAQGLANWKAGKNGTR 186
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 187 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 246
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 247 RAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 306
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 307 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 366
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 367 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 423
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 424 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 483
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 484 PDNAS-RGPVGTTA------PSAPGP 502
>gi|289442337|ref|ZP_06432081.1| transposase [Mycobacterium tuberculosis T46]
gi|289568892|ref|ZP_06449119.1| transposase [Mycobacterium tuberculosis T17]
gi|289749446|ref|ZP_06508824.1| transposase [Mycobacterium tuberculosis T92]
gi|289752978|ref|ZP_06512356.1| transposase [Mycobacterium tuberculosis EAS054]
gi|289415256|gb|EFD12496.1| transposase [Mycobacterium tuberculosis T46]
gi|289542646|gb|EFD46294.1| transposase [Mycobacterium tuberculosis T17]
gi|289690033|gb|EFD57462.1| transposase [Mycobacterium tuberculosis T92]
gi|289693565|gb|EFD60994.1| transposase [Mycobacterium tuberculosis EAS054]
Length=550
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 237/446 (54%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G+A NW++ + G R
Sbjct 138 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGLADLAQGLANWKAGKNGTR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 191 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 251 RAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 310
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 371 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 427
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 428 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 487
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 488 PDNAS-RGPVGTTA------PSAPGP 506
>gi|289757008|ref|ZP_06516386.1| transposase [Mycobacterium tuberculosis T85]
gi|294996407|ref|ZP_06802098.1| transposase [Mycobacterium tuberculosis 210]
gi|289712572|gb|EFD76584.1| transposase [Mycobacterium tuberculosis T85]
gi|326904856|gb|EGE51789.1| transposase [Mycobacterium tuberculosis W-148]
Length=550
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 237/446 (54%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G+A NW++ + G R
Sbjct 138 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGLADLAQDLANWKAGKNGTR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 191 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 251 RAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 310
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 371 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 427
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 428 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 487
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 488 PDNAS-RGPVGTTA------PSAPGP 506
>gi|289744653|ref|ZP_06504031.1| transposase [Mycobacterium tuberculosis 02_1987]
gi|289685181|gb|EFD52669.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=550
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/446 (42%), Positives = 236/446 (53%), Gaps = 33/446 (7%)
Query 6 KVPEGWCVQAFRFTLN-PTQTQAASLAR-HFGARRKAFNWTVTALKADIKAWRAD-GTES 62
++P GW V A +F + P Q A L R HFGARRKAFNW + +KAD+ A AD ES
Sbjct 78 QLPSGWMVTAAKFEVEWPADPQRAGLVRSHFGARRKAFNWGLAQVKADLDAKAADPAHES 137
Query 63 AKPSLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKR 122
L+ LR WN KD V WW E SKE Y+ G A NW++ + G R
Sbjct 138 VDWDLKSLRWAWNRAKDDVAP-------WWAENSKECYSSGSADLAQDLANWKAGKNGTR 190
Query 123 AGKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKG 182
G+ VG PRFK RD RV FTTG MR+E DRR +T+PVIG +R ENTRRV+R + G
Sbjct 191 KGRRVGFPRFKSGRRDPGRVRFTTGTMRIEDDRRTITVPVIGPLRAKENTRRVQRHLVSG 250
Query 183 RARVLAITVRRNGTRLDASVRVLVQRPQQRR-VALPDSRVGVDVGVRRLATVADAEGTVL 241
RA++L +T+ + RL +V ++ P R + P R G+D+GVR LATVA +
Sbjct 251 RAQILNMTLSQRWGRLFVAVCYALRTPTTRSPLTQPTVRAGMDLGVRTLATVATLDTATG 310
Query 242 EQV----PNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLH 297
EQ PNP PL A L RR R SR GS + +L+RL RR +R H
Sbjct 311 EQTIIEYPNPAPLKATLVARRRAGRELSRRIPGSHGHRAVKAKLARLDRRCVHLRREAAH 370
Query 298 VLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGS 357
LTT LA T+G++V+E LD A M K RA RR++SDAA+ L+YKT
Sbjct 371 QLTTELAGTYGQVVIEDLDVAAM---KRSMRRRAFRRSVSDAAMGLVAPQLAYKTAKCSG 427
Query 358 SLVVADRWFPSSKTCHACRH-------VQDIG-WDEKWQCDGCSITHQRDDNAAINLARY 409
L VADRWF SS+ H C +Q G D+ C RD NAA+NL +
Sbjct 428 VLTVADRWFASSQIHHGCTSPDGTPCRLQGKGRIDKHLLCPVTGEVVDRDRNAALNLRDW 487
Query 410 EEPPSVVGPVGAAVKRGADRKTGPGP 435
+ S GPVG + PGP
Sbjct 488 PDNAS-RGPVGTTA------PSAPGP 506
>gi|86742113|ref|YP_482513.1| transposase [Frankia sp. CcI3]
gi|86568975|gb|ABD12784.1| transposase [Frankia sp. CcI3]
Length=442
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 183/462 (40%), Positives = 241/462 (53%), Gaps = 47/462 (10%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKA-----DIKAWRADGTESAKP-- 65
+QA+RF L+P Q Q A + RH GA R A+NW + +KA D + + P
Sbjct 4 LQAYRFALDPNQAQLAGIRRHAGASRFAYNWGLARVKAAHAQRDAEQSYGLTGDLLTPVP 63
Query 66 -SLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAG 124
+L LR WN VK + WW ECSKEA+ G+ N+ R GKR G
Sbjct 64 WTLPALRLAWNAVKRDIAP-------WWDECSKEAFRAGLDQLARGLKNFTDSRQGKRKG 116
Query 125 KTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRA 184
+ VG PRFKK+G+ D +TTGA D ++ LP IG ++ +E + +A GRA
Sbjct 117 RRVGFPRFKKRGKARDSFRYTTGAY-GPADETYVKLPRIGRVKVHEPMGALTGRLADGRA 175
Query 185 RVLAITVRRNGTRLDASVRVLV-----QRPQQRRVALPDSRVGVDVGVRRLATVADAEGT 239
R+ +TV R R S V V +RP +R+ A VGVD+GV+ LA ++ +
Sbjct 176 RLFGVTVSRTADRWFVSFTVEVDRDVPERPSRRQRA--GGPVGVDLGVKHLAVLSTGQ-- 231
Query 240 VLEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVL 299
VPNP+ A R LRR SRA +R GS +R +L+ +H RV + R + LH L
Sbjct 232 ---TVPNPKHYQRAERRLRRASRAHARSKPGSAGRRQRAAQLATIHVRVANQRHNGLHKL 288
Query 300 TTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSL 359
TTRLA++H +VVE L AGM+R + L RA++DA +A RR L+YKT WYGS+L
Sbjct 289 TTRLARSHDTVVVEDLHVAGMVRNRRLA------RAVADAGMAEVRRQLAYKTRWYGSTL 342
Query 360 VVADRWFPSSKTCHAC--RHVQDIGWDEKWQCDGCSITHQRDDNAAINLARY--EEPPSV 415
VVADRW+PSSKTC C R+ + + C C + RD NAAINL P
Sbjct 343 VVADRWYPSSKTCSGCGWRNPSLTLSERTFTCQSCGLVLDRDHNAAINLHHLVAASTPET 402
Query 416 VGPVGAAVKRGADRKTGPGP--AGGREARKAT-GHPAGEQPR 454
RGADRKT AG RE AT G G PR
Sbjct 403 EN------ARGADRKTRASGRVAGKREPGTATAGQTGGASPR 438
>gi|295696698|ref|YP_003589936.1| transposase, IS605 OrfB family [Bacillus tusciae DSM 2912]
gi|295412300|gb|ADG06792.1| transposase, IS605 OrfB family [Bacillus tusciae DSM 2912]
Length=433
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/392 (42%), Positives = 222/392 (57%), Gaps = 24/392 (6%)
Query 12 CVQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGTESAKP-SLRVL 70
++A+RF L+P+ Q LA H GARR AFNW + +K ++A R G + P +L L
Sbjct 3 ALEAYRFALDPSPHQERMLASHSGARRFAFNWGLALVKERLEA-RERGEDVEVPWTLAAL 61
Query 71 RKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAGKTVGVP 130
R+ WN K+QV WW E SKEAY+ G+ G + R+GKR G+ VG P
Sbjct 62 RREWNRQKEQVAP-------WWRENSKEAYSAGLNGLARGLKAFFDSRSGKRKGRRVGFP 114
Query 131 RFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRARVLAIT 190
+F+KKGR + V FTTGA+RV+ D+ H+ LP IG +RT+E T + + RAR+L+ T
Sbjct 115 KFRKKGRGRESVRFTTGAIRVD-DKSHVVLPRIGRVRTHEMTTALLERVQSDRARILSAT 173
Query 191 VRRNGTRLDASVRVLVQRPQQRRVALPDSRVGVDVGVRRLATVADAEGTVLEQVPNPRPL 250
V R G R S V+R R P VGVD G++ LA ++ E +VPNP+PL
Sbjct 174 VSREGGRWFVSFTCEVERDAGR-PKRPRDVVGVDAGLKHLAVLSTGE-----KVPNPQPL 227
Query 251 DAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHVLTTRLAKTHGRI 310
ALR + R++R R + SR + + L+R H RV +R +H LT RLA T G +
Sbjct 228 RKALRKIARLNRELVRRKRRSRHWEDTRRRLNRAHARVARIRLDAMHKLTHRLATTFGTV 287
Query 311 VVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSSLVVADRWFPSSK 370
VVE L+ AGM R + L RA+ DA LA RR L YK WYGS LV A R +PSSK
Sbjct 288 VVEDLNVAGMGRNRRLS------RAIYDAGLAELRRQLRYKCEWYGSRLVQAPRMYPSSK 341
Query 371 TCHACRHVQDI--GWDEKWQCDGCSITHQRDD 400
TC C +++I W+ ++CD C RD+
Sbjct 342 TCSRCGAIKEILPLWERVYRCDVCGTVMDRDE 373
>gi|306798812|ref|ZP_07437114.1| transposase [Mycobacterium tuberculosis SUMu006]
gi|308340974|gb|EFP29825.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=123
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 340 ALATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRD 399
ALATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRD
Sbjct 3 ALATPRRHLSYKTGWYGSSLVVADRWFPSSKTCHACRHVQDIGWDEKWQCDGCSITHQRD 62
Query 400 DNAAINLARYEEPPSVVGPVGAAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 459
DNAAINLARYEEPPSVVGPVGAAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV
Sbjct 63 DNAAINLARYEEPPSVVGPVGAAVKRGADRKTGPGPAGGREARKATGHPAGEQPRDGVQV 122
Query 460 K 460
K
Sbjct 123 K 123
>gi|158316871|ref|YP_001509379.1| IS605 family transposase OrfB [Frankia sp. EAN1pec]
gi|158112276|gb|ABW14473.1| transposase, IS605 OrfB family [Frankia sp. EAN1pec]
Length=461
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 186/464 (41%), Positives = 232/464 (50%), Gaps = 47/464 (10%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADIKAWRADGT-----ESAKP-- 65
+QA+RF L+P Q Q A L RH GA R FNW + +KA + A+ + + P
Sbjct 4 LQAYRFALDPNQAQLADLRRHAGAARFVFNWGLARVKAALSQRDAEQSYGLTGDMLTPVP 63
Query 66 -SLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRAG 124
+L LR WN K V WW CSKEAY+ G+ N+ R GKR G
Sbjct 64 WTLPALRLAWNEAKSTVAP-------WWSACSKEAYSSGLDQLARGLKNFTDSRTGKRKG 116
Query 125 KTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGRA 184
K VG PRFKK+GR D +TTGA + + LP +G ++ +E + +A G A
Sbjct 117 KRVGFPRFKKRGRARDSFRYTTGAYGPASNL-QVKLPRLGRVKVHEAMGALTGRLAAGSA 175
Query 185 RVLAITVRRNGTRLDASVRVLVQR--PQQRRVALPDSR------VGVDVGVRRLATVADA 236
R+L TV R R + V + R PQ P +R VGVD GV+ LA ++
Sbjct 176 RLLGATVSRTAGRWFVAFTVEIDREIPQN-----PSARQRAGGAVGVDAGVKHLAVLSTG 230
Query 237 EGTVLEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHL 296
E QV NPRPL +LR LR SRA +R GS +R L LH + R L
Sbjct 231 E-----QVDNPRPLTRSLRRLRTASRACARSKPGSAGRRQRAAALGHLHAHIAHQRRDGL 285
Query 297 HVLTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYG 356
H LTTRL K H IVVE L AGM+R + L RA+SD +A RR L+YKT WYG
Sbjct 286 HKLTTRLTKNHDVIVVEDLHVAGMVRNRRLA------RAVSDTGMAEIRRQLTYKTVWYG 339
Query 357 SSLVVADRWFPSSKTCHAC--RHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPS 414
S LVVADRW+PSSKTC C R+ D + C C + RD NAAINL R S
Sbjct 340 SRLVVADRWYPSSKTCSGCGWRNPSLTPADRTFACQSCGLVIDRDLNAAINL-RNLVAAS 398
Query 415 VVGPVGAAVKRGADRKTGP-GPAGGREARKATGHPAGEQPRDGV 457
A RGADR+T P G G+ G E+ R GV
Sbjct 399 TSETENA---RGADRRTQPAGRVAGKREPGTVGMTPCERVRPGV 439
>gi|158312542|ref|YP_001505050.1| IS605 family transposase OrfB [Frankia sp. EAN1pec]
gi|158107947|gb|ABW10144.1| transposase, IS605 OrfB family [Frankia sp. EAN1pec]
Length=442
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 179/435 (42%), Positives = 232/435 (54%), Gaps = 42/435 (9%)
Query 13 VQAFRFTLNPTQTQAASLARHFGARRKAFNWTVTALKADI------KAWRADGTESAKP- 65
+QA+RF L+P QAA+L RH GA R A+NW + +KA K++ DG + P
Sbjct 4 LQAYRFALDPNDAQAANLRRHAGAARFAYNWGLARVKAAFAQRDAEKSYGLDG-DLLTPV 62
Query 66 --SLRVLRKRWNTVKDQVCVNAQTGQVWWPECSKEAYADGIAGAVDAYWNWQSCRAGKRA 123
+L LR WN K V WW ECSKEAY+ G+ A N+ R GKR
Sbjct 63 PWTLPALRLAWNAAKRDVAP-------WWDECSKEAYSAGLDQLARALKNFTDSRKGKRN 115
Query 124 GKTVGVPRFKKKGRDADRVCFTTGAMRVEPDRRHLTLPVIGTIRTYENTRRVERLIAKGR 183
G+ VG PRFKK+G+ D +TTGA D ++ LP IG ++ E + +A GR
Sbjct 116 GRRVGFPRFKKRGKARDSFRYTTGAYGPATDL-YVKLPRIGRVKVGEPMGALTSRLADGR 174
Query 184 ARVLAITVRRNGTRLDASVRV-----LVQRPQQRRVALPDSRVGVDVGVRRLATVADAEG 238
AR+ TV R R + V + +RP +R+ VGVD+GV+ LA ++ E
Sbjct 175 ARLGGATVSRTAGRWFVAFTVDTDRDVSERPTRRQ--WTGGTVGVDLGVKHLAVLSTGE- 231
Query 239 TVLEQVPNPRPLDAALRGLRRVSRARSRCTKGSRRYCERTTELSRLHRRVNDVRTHHLHV 298
V NP+ AALR LRR SRA +R GS +R L+ +H RV + R LH
Sbjct 232 ----TVANPKRHAAALRKLRRASRAYARSKPGSAGRRQRAAGLATIHARVANQRRDGLHK 287
Query 299 LTTRLAKTHGRIVVEGLDAAGMLRQKGLPGARARRRALSDAALATPRRHLSYKTGWYGSS 358
LTTRLA++H IVVE L AGM+R + L RA+SD + RR L YKT WYGS
Sbjct 288 LTTRLARSHDVIVVEDLHVAGMVRNRRLA------RAVSDVGMGEIRRQLDYKTRWYGSR 341
Query 359 LVVADRWFPSSKTCHAC--RHVQDIGWDEKWQCDGCSITHQRDDNAAINLARYEEPPSVV 416
L VADRW+PSSKTC C R+ D ++C C + RD NAAINL R++ S
Sbjct 342 LHVADRWYPSSKTCSGCGWRNPSLTLSDRTFRCQSCGLVADRDHNAAINL-RHQVAASTS 400
Query 417 GPVGAAVKRGADRKT 431
V A RGAD KT
Sbjct 401 ETVNA---RGADHKT 412
Lambda K H
0.321 0.133 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 964325701738
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40